transmembrane protein 20, maker-scaffold628_size122696-snap-gene-0.30 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of transmembrane protein 20 vs. L. salmonis genes
Match: EMLSAG00000005995 (supercontig:LSalAtl2s:LSalAtl2s324:157329:162414:1 gene:EMLSAG00000005995 transcript:EMLSAT00000005995 description:"maker-LSalAtl2s324-augustus-gene-1.30") HSP 1 Score: 211.46 bits (537), Expect = 3.163e-61 Identity = 135/362 (37.29%), Postives = 198/362 (54.70%), Query Frame = 0 Query: 78 GIVLVVLAGLSFTLANVIQKIVAPELSFWHLLFYRATFQIVVMGLALIRLRLSPL-PTAEWGLRIRLVVQGLLGGLLLLCIFISIKSVPLGNASSIFFCTPVFTFIFAVCMLNERMASYRTMISIFMITGVVLITRPPFVFPTPDTLDIQCPERGNVTNHTLTSSEKSNGADHGIDLGANELPSLAGNCSGGQAHSELKAYNDSTTIGYMCCVCVPLLSAVVSIMTRQLKTFHPSVLMFWFACGAFLVGTTGVTW-----MNQWS-HLFHLGTLDWIYVLAILVLGIFGNVAYTIAVRFVSPSKANVFRSFEVILNFILQVEL---EHTPLFPSNFVGIFLLLLAVVSTGFESEVMKRLGHK 429 G +L V AG++FT ANVIQK AP L+FW LLF RA Q++V+G +P+ PT G R R+ QG +GG+LLLC+F+++K +PLG+AS+IFF P FT +F+ CMLNE +R +S +I GV+L+ RPP +FP P++L G + H+E + G +C VP+LSA+++I+ RQ K VL FWF GA V G+ N +S ++F+ L+W+Y I+ LGI GN+ TIA++F+SP++A VFRSFEVI N+IL L P ++ +G L++++V+ G E+ + KR K Sbjct: 243 GTLLSVFAGITFTSANVIQK-YAPNLNFWDLLFVRAVSQLIVIGGLSFWCGYNPIGPT---GSRSRIYAQGFMGGVLLLCLFVAVKHIPLGDASAIFFSAPFFTMLFSSCMLNEHFGLFRISVSTIIIVGVLLLCRPPALFP-PESL-------------------------------------------GSKLHNETGNF-----FGTICAWTVPILSAIITILNRQCKHVPFLVLTFWFGVGALFVSLIGMNIPFLHSSNVYSGNIFNFSPLEWVYTATIVTLGIIGNIVMTIALKFISPARAMVFRSFEVIANYILXAXLFXKXAMPFHVTDPIGALLIVISVMLMGLETMIQKRYSWK 551
BLAST of transmembrane protein 20 vs. L. salmonis genes
Match: EMLSAG00000000982 (supercontig:LSalAtl2s:LSalAtl2s116:186337:190168:-1 gene:EMLSAG00000000982 transcript:EMLSAT00000000982 description:"maker-LSalAtl2s116-snap-gene-2.14") HSP 1 Score: 70.8626 bits (172), Expect = 2.542e-13 Identity = 41/121 (33.88%), Postives = 73/121 (60.33%), Query Frame = 0 Query: 78 GIVLVVLAGLSFTLANVIQKIVAPELSFWHLLFYRATFQIVVMGLALIRLRLSPLPTAEWGLRIRLVVQGLLGGLLLLCIFISIKSVPLGNASSIFFCTPVFTFIFAVCMLNERMASYRTM 198 GI L ++GL FTL +V K++A + +L +RA Q+V + L L+ + + + G+R+ + +QG++G L + CIFI +P+G+A++I FC+P+F IF+ +L E +R + Sbjct: 197 GIFLAAISGLFFTLCSVTVKLLA-RIDPSEVLVFRAVIQLV-LTLPLVLCSGNSILGPK-GVRVLVYLQGVIGCLTVTCIFIGFARLPVGDAATIIFCSPIFVMIFSHILLREHCGLFRVV 314
BLAST of transmembrane protein 20 vs. L. salmonis genes
Match: EMLSAG00000006576 (supercontig:LSalAtl2s:LSalAtl2s360:136003:151698:1 gene:EMLSAG00000006576 transcript:EMLSAT00000006576 description:"maker-LSalAtl2s360-augustus-gene-1.12") HSP 1 Score: 60.077 bits (144), Expect = 6.935e-10 Identity = 46/160 (28.75%), Postives = 84/160 (52.50%), Query Frame = 0 Query: 78 GIVLVVLAGLSFTLANVIQKIVAPELSFWHLLFYRATFQI-----VVMGLALIRLRLSPLPTAEWGLRI--RLVVQGLL------GGLLLLCIFISIKSVPLGNASSIFFCTPVFTFIFAVCMLNERMASYRTMISIFMITGVVLITRPPFVFPTPDTLD 224 G+ L L+G+ T+ + KI+ +++ +L R FQ+ ++MGL + R S P + G RI + ++ +L G LL IF ++K + + N +I +PV IF+ +LN+R R++ ++F++ GVVLI + P+ F D+ + Sbjct: 71 GLFLAFLSGILMTIYSSCYKIIKKDINLSAILLLRGMFQMFLMGSMIMGLKDLGFRFSSTPEIQPGQRINPKCIISLILSLVAACAGFRLLLIFGALKRIYMANVHTILNGSPVLVMIFSHFVLNDRCNIIRSISTVFLVGGVVLIFQ-PYKFVMLDSFE 229
BLAST of transmembrane protein 20 vs. SwissProt
Match: gi|109895215|sp|Q2M3R5.1|S35G1_HUMAN (RecName: Full=Solute carrier family 35 member G1; AltName: Full=Partner of STIM1; AltName: Full=Transmembrane protein 20) HSP 1 Score: 75.0998 bits (183), Expect = 2.534e-13 Identity = 52/164 (31.71%), Postives = 91/164 (55.49%), Query Frame = 0 Query: 65 CCFPSRSAREAS-------FGIVLVVLAGLSFTLANV----IQKIVAPELSFWHLLFYRATFQIVVMGLALIRLRLSPLPTAEWGLRIRLVVQGLLGGLLLLCIFISIKSVPLGNASSIFFCTPVFTFIFAVCMLNERMASYRTMISIFMITGVVLITRPPFVF 217 CC SR+ EA G+ +L+ F++ ++ +Q + A E+S +R FQ++V+ LI + + G RI L+++G+LG ++ I+ + +++ L +A+ I F +PVFT IFA L E+ + + + ++F ITGV+LI RPPF+F Sbjct: 53 CC--SRTEPEAKKKAPCPGLGLFYTLLSAFLFSVGSLFVKKVQDVHAVEISA-----FRCVFQMLVVIPCLIYRKTGFIGPK--GQRIFLILRGVLGSTAMMLIYYAYQTMSLADATVITFSSPVFTSIFAWICLKEKYSPWDALFTVFTITGVILIVRPPFLF 207
BLAST of transmembrane protein 20 vs. SwissProt
Match: gi|81875705|sp|Q8BY79.1|S35G1_MOUSE (RecName: Full=Solute carrier family 35 member G1; AltName: Full=Transmembrane protein 20) HSP 1 Score: 66.6254 bits (161), Expect = 1.544e-10 Identity = 56/195 (28.72%), Postives = 94/195 (48.21%), Query Frame = 0 Query: 39 VAMPESQDEEQLLPHQGPEP-----WYTGIFCCFPSRSAREAS-------FGIVLVVLAGLSFTLANV----IQKIVAPELSFWHLLFYRATFQIVVMGLALIRLRLSPLPTAEWGLRIRLVVQGLLGGLLLLCIFISIKSVPLGNASSIFFCTPVFTFIFAVCMLNERMASYRTMISIFMITGVVLITRPPFVF 217 +A P S EE + P W G + C SR EA G+ VL+ F++A++ +Q + A E+S +R Q++V+ LI + + G R+ L ++G+ G ++ ++ + ++ L +A+ I F PVFT IFA L E+ + + ++F I GV+LI RPPF+F Sbjct: 24 LADPASPGEEHVDVEAEGAPGRGRCWPCGAWAC-GSRGEPEAKKKAPCPGLGLFYTVLSAFLFSVASLFVKKVQGVHAVEISA-----FRCVVQMLVIIPCLIYRKTGFIGPK--GQRLFLFLRGVFGSSAMILMYYAFQTTSLADATVIAFSCPVFTSIFAWIFLKEKYSLWDAFFTLFAIAGVILIVRPPFIF 210
BLAST of transmembrane protein 20 vs. nr
Match: gi|225708766|gb|ACO10229.1| (Transmembrane protein 20 [Caligus rogercresseyi]) HSP 1 Score: 188.348 bits (477), Expect = 1.336e-50 Identity = 143/403 (35.48%), Postives = 212/403 (52.61%), Query Frame = 0 Query: 36 DNVVAMPESQDEEQLLPHQGPEPWYTGIFCCFPSRSAREASFGIVLVVLAGLSFTLANVIQKIVAPELSFWHLLFYRATFQIVVMGLALIRLRLSPLPTAEWGLRIRLVVQGLLGGLLLLCIFISIKSVPLGNASSIFFCTPVFTFIFAVCMLNERMASYRTMISIFMITGVVLITRPPFVFPTPDTLDIQCPERGNVTNHTLTSSEKSNGADHGIDLGANELPSLAGNCSGGQAHSELKAYNDSTTIGYMCCVCVPLLSAVVSIMTRQLKTFHPSVLMFWFACGAFLVGTTGVTW-----MNQWS-HLFHLGTLDWIYVLAILVLGIFGNVAYTIAVRFVSPSKANVFRSFEVILNFILQVEL---EHTPLFPSNFVGIFLLLLAVVSTGFESEVMKRLGHK 429 +N V E+QD+ L + E + G G +LAG++FT ANVIQK P L+FW LLF RA Q+ ++G +P+ + G R R+ +QG+LGG+LLLC+FI++K + LG+AS+IFF P FT +F+ CMLNE +R +S +ITGV+L+ RPP +FP P++L PE A LP N T IG C + VP+LSA+++I+ RQ + VL FWF GA V G+ N +S ++++ T +WIY +I+ LGI GN+ TIA++ ++P++A VFRSFEVI N+ILQ L ++ +G FL++++V+ GFE + K+ K Sbjct: 10 ENDVESEETQDQHILPEEESLEHRFAG----------HSNLIGTAGAILAGITFTSANVIQK-YTPNLNFWDLLFVRAVSQLTIIGGFSFWFGHNPIGPS--GSRSRIYMQGILGGILLLCLFIAVKHIALGDASAIFFSAPFFTMLFSSCMLNEHFGLFRVAVSGIIITGVILLCRPPAIFP-PESL----PE-------------------------ATALP------------ENDAIVNQQTLIGTCCALSVPVLSAIITILNRQCRHVPFLVLTFWFGVGALFVSFIGMNIPFLHSSNVYSGNIYNFTTTEWIYTSSIVALGIIGNIIMTIALKLITPARAMVFRSFEVIANYILQATLFSKVSVSFHITDPLGAFLIVMSVLLMGFEISIKKKYSWK 357
BLAST of transmembrane protein 20 vs. nr
Match: gi|225711324|gb|ACO11508.1| (Transmembrane protein 20 [Caligus rogercresseyi]) HSP 1 Score: 188.348 bits (477), Expect = 1.350e-50 Identity = 143/403 (35.48%), Postives = 212/403 (52.61%), Query Frame = 0 Query: 36 DNVVAMPESQDEEQLLPHQGPEPWYTGIFCCFPSRSAREASFGIVLVVLAGLSFTLANVIQKIVAPELSFWHLLFYRATFQIVVMGLALIRLRLSPLPTAEWGLRIRLVVQGLLGGLLLLCIFISIKSVPLGNASSIFFCTPVFTFIFAVCMLNERMASYRTMISIFMITGVVLITRPPFVFPTPDTLDIQCPERGNVTNHTLTSSEKSNGADHGIDLGANELPSLAGNCSGGQAHSELKAYNDSTTIGYMCCVCVPLLSAVVSIMTRQLKTFHPSVLMFWFACGAFLVGTTGVTW-----MNQWS-HLFHLGTLDWIYVLAILVLGIFGNVAYTIAVRFVSPSKANVFRSFEVILNFILQVEL---EHTPLFPSNFVGIFLLLLAVVSTGFESEVMKRLGHK 429 +N V E+QD+ L + E + G G +LAG++FT ANVIQK P L+FW LLF RA Q+ ++G +P+ + G R R+ +QG+LGG+LLLC+FI++K + LG+AS+IFF P FT +F+ CMLNE +R +S +ITGV+L+ RPP +FP P++L PE A LP N T IG C + VP+LSA+++I+ RQ + VL FWF GA V G+ N +S ++++ T +WIY +I+ LGI GN+ TIA++ ++P++A VFRSFEVI N+ILQ L ++ +G FL++++V+ GFE + K+ K Sbjct: 10 ENDVESEETQDQHILPEEESLEHRFAG----------HSNLIGTAGAILAGITFTSANVIQK-YTPNLNFWDLLFVRAVSQLTIIGGFSFWFGHNPIGPS--GSRSRIYMQGILGGILLLCLFIAVKHIALGDASAIFFSAPFFTMLFSSCMLNEHFGLFRVAVSGIIITGVILLCRPPAIFP-PESL----PE-------------------------ATALP------------ENDAIVNQQTLIGTCCALSVPVLSAIITILNRQCRHVPFLVLTFWFGVGALFVSFIGMNIPFLHSSNVYSGNIYNFTTTEWIYTSSIVALGIIGNIIMTIALKLITPARAMVFRSFEVIANYILQATLFSKVSVSFHITDPLGAFLIVMSVLLMGFEISIKKKYSWK 357
BLAST of transmembrane protein 20 vs. nr
Match: gi|1325303205|ref|XP_023333176.1| (solute carrier family 35 member G1-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 109.768 bits (273), Expect = 8.167e-22 Identity = 104/430 (24.19%), Postives = 187/430 (43.49%), Query Frame = 0 Query: 70 RSAREASFGIVLVVLAGLSFTLANVIQKIVAPELSFWHLLFYRATFQIVVMGLALIRLRLSPLPTAEWGLRIRLVVQGLLGGLLLLCIFISIKSVPLGNASSIFFCTPVFTFIFAVCMLNERMASYRTMISIFMITGVVLITRPPFVFPTPDTLDIQCPERGNVTNHTLTSSEKSNGADHGIDLGANELPSLAGNCSGGQAHSELKAYNDSTTIGYMCCVCVPLLSAVVSIMTRQL-KTFHPSVLMFWFACGAFLVGTTGVTWMNQWSHLFHLGT------LDWIYVLAILVLGIFGNVAYTIAVRFVSPSKANVFRSFEVILNFILQ-VELEHTPLFPSNFVGIFLLLLAVVSTGFESEVMK-RLGHKRWTVSGAGDQIDDDDKGEELGRN---GRPAQTGSHTRLIQ---VGEERDQEGKNEAQPEVE 484 R+ S G++L L+G+ T+ + + K + E+ ++ R Q V +G ++S + + E + L + GGL LL IF S +PLG++++I F +PVF + ++C+L E +R +I+GVVLI +PPF+F S+++ Y+ +GY L SA+ + T+++ + +V++F+ + + G+ G LF LGT +W + I VLGI AV SPS+ + R +++L +I+Q V PL+ ++ VG L+L VV+ FE ++++ RL ++ + G G + DD + + G N G+ + ++ EE+D ++ PE E Sbjct: 94 RALCHRSTGLLLAFLSGVLMTVYSSMIKFLV-EMDSMQVVIIRGVIQAVCLGAVAYYKKMSFIGSREKCAPLILFFVSITGGLRLLFIFTSFSRLPLGDSTTIIFSSPVFVMLLSICILKESCGLFRLFAGTTLISGVVLIAKPPFIF----------------------------------------------------GSSQVEEYD---ALGYSLVTLACLSSALGIVFTKKISQKVEKNVIVFYLGLASVVCGSIG---------LFTLGTPSNPPLWEWGLAVGIAVLGIIQQYMLIYAVSLESPSRVTIVRQSQIVLAYIVQAVFFGVLPLW-TDIVGALLVLGTVVTMTFEKQILETRLCSNKY-IKGRGCK-DDAEYKTKPGVNPPHGKDKSIEEEKKDVENCGTPEEKDSPECDKRNPETE 455
BLAST of transmembrane protein 20 vs. nr
Match: gi|1325303203|ref|XP_023333175.1| (solute carrier family 35 member G1-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 109.768 bits (273), Expect = 9.829e-22 Identity = 104/430 (24.19%), Postives = 187/430 (43.49%), Query Frame = 0 Query: 70 RSAREASFGIVLVVLAGLSFTLANVIQKIVAPELSFWHLLFYRATFQIVVMGLALIRLRLSPLPTAEWGLRIRLVVQGLLGGLLLLCIFISIKSVPLGNASSIFFCTPVFTFIFAVCMLNERMASYRTMISIFMITGVVLITRPPFVFPTPDTLDIQCPERGNVTNHTLTSSEKSNGADHGIDLGANELPSLAGNCSGGQAHSELKAYNDSTTIGYMCCVCVPLLSAVVSIMTRQL-KTFHPSVLMFWFACGAFLVGTTGVTWMNQWSHLFHLGT------LDWIYVLAILVLGIFGNVAYTIAVRFVSPSKANVFRSFEVILNFILQ-VELEHTPLFPSNFVGIFLLLLAVVSTGFESEVMK-RLGHKRWTVSGAGDQIDDDDKGEELGRN---GRPAQTGSHTRLIQ---VGEERDQEGKNEAQPEVE 484 R+ S G++L L+G+ T+ + + K + E+ ++ R Q V +G ++S + + E + L + GGL LL IF S +PLG++++I F +PVF + ++C+L E +R +I+GVVLI +PPF+F S+++ Y+ +GY L SA+ + T+++ + +V++F+ + + G+ G LF LGT +W + I VLGI AV SPS+ + R +++L +I+Q V PL+ ++ VG L+L VV+ FE ++++ RL ++ + G G + DD + + G N G+ + ++ EE+D ++ PE E Sbjct: 104 RALCHRSTGLLLAFLSGVLMTVYSSMIKFLV-EMDSMQVVIIRGVIQAVCLGAVAYYKKMSFIGSREKCAPLILFFVSITGGLRLLFIFTSFSRLPLGDSTTIIFSSPVFVMLLSICILKESCGLFRLFAGTTLISGVVLIAKPPFIF----------------------------------------------------GSSQVEEYD---ALGYSLVTLACLSSALGIVFTKKISQKVEKNVIVFYLGLASVVCGSIG---------LFTLGTPSNPPLWEWGLAVGIAVLGIIQQYMLIYAVSLESPSRVTIVRQSQIVLAYIVQAVFFGVLPLW-TDIVGALLVLGTVVTMTFEKQILETRLCSNKY-IKGRGCK-DDAEYKTKPGVNPPHGKDKSIEEEKKDVENCGTPEEKDSPECDKRNPETE 465
BLAST of transmembrane protein 20 vs. nr
Match: gi|1061482647|gb|ODM99921.1| (Solute carrier family 35 member G1 [Orchesella cincta]) HSP 1 Score: 107.071 bits (266), Expect = 1.944e-21 Identity = 99/356 (27.81%), Postives = 165/356 (46.35%), Query Frame = 0 Query: 77 FGIVLVVLAGLSFTLANVIQKIVAPELSFWHLLFYRATFQI-VVMGLALIRLR--LSPLPTAEWGLRIRLVVQGLLGGLLLLCIFISIKSVPLGNASSIFFCTPVFTFIFAVCMLNERMASYRTMISIFMITGVVLITRPPFVFPTPDTLDIQCPERGNVTNHTLTSSEKSNGADHGIDLGANELPSLAGNCSGGQAHSELKAYNDSTTIGYMCCVCVPLLSAVVSIMTRQLKTFHPSVLMFWFACGAFLVGTTGVTWMNQWSHLFHLGTLDWIYVLAILVLGIFGNVAYTIAVRFVSPSKANVFRSFEVILNFILQVELEHTPLFPSNFVGIFLLLLAVVSTGFESEVMKRLGHK 429 FGI L ++G+ FTL + K + E+ LL +R+ FQI V + +AL + + L P G R L QG++GG L+ +F S + +PLG+A++I F +PVF I + L E YRT I F++TGVV IT+PPF+F +P+ E + YN +GY+ + + +A+ ++ R+ K H SV++F F+ + LV +T + + H W+ ++ + V G+ G + IA+ + V RS +++L F P + S +G F++++ V+ G E +V+ RL HK Sbjct: 83 FGIFLAFISGVFFTLCSGTVKYLT-EVDPMELLIFRSLFQIGVTLPIALYKGQNILGP-----QGSRALLFAQGVVGGTTLVMLFYSFRLLPLGDAATIIFSSPVFVMIMSHIWLREPCGFYRTFIVFFLVTGVVFITKPPFLFTSPE---------------------------------------------------EKETYN---ILGYVAALFGTIFTAINIVVMRKCKDVHFSVVVFQFSFWS-LVISTCILLAGGTPAVPHQTATQWVLIVLVAVFGLSGQILVAIALAHEGAGRVAVTRSMDIVLIF------NEVPDWKS-IMGAFMVMICVIGMGIE-DVVHRLLHK 369
BLAST of transmembrane protein 20 vs. nr
Match: gi|1325308243|ref|XP_023335735.1| (solute carrier family 35 member G1-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 105.916 bits (263), Expect = 9.726e-21 Identity = 85/321 (26.48%), Postives = 155/321 (48.29%), Query Frame = 0 Query: 78 GIVLVVLAGLSFTLANVIQKIVAPELSFWHLLFYRATFQIVVMGLALIRLRLSPLPTAEWGLRIRLVVQGLLGGLLLLCIFISIKSVPLGNASSIFFCTPVFTFIFAVCMLNERMASYRTMISIFMITGVVLITRPPFVFPTPDTLDIQCPERGNVTNHTLTSSEKSNGADHGIDLGANELPSLAGNCSGGQAHSELKAYN--DSTTIGYMCCVCVPLLSAVVSIMTRQLKTFHPSVLMFWFACGAFLVGTTGVTWMNQWSHLFHLGTLDWIYVLAILVLGIFGNVAYTIAVRFVSPSKANVFRSFEVILNFILQVELEHT 396 G L ++ G+ +T ++ + +V PE++ W L+ R Q+++M L+ R +PL + GLR+++++QG++GG+LLL I++SI +P + FF P F + + +L E A +R I + +++G L+ P +F + P G+V L + SN + + P + QA+ L N + IG + + P+L+A + I+ +Q + H SV +FW G V + + Q ++F G +W + I LG+ GN+ +P K S E++ +ILQ+ + T Sbjct: 86 GYFLTLIGGILYTASSALINLV-PEINPWTLIILRCLVQLILMVPVLVWTRTNPLGPS--GLRLKIIMQGIVGGVLLLAIYLSINRLPTDVVALFFFSVPGFAMVLSAAILKEHFAIFRAFIILIVLSGTFLLIHPTTIFSQIVNV---LPLNGSV----LLEEDISNLPTLLVRINILGWP-----INFKQANFSLNEINLDNLDAIGIIASLSTPILTAYLCILMKQCQIIHFSVSLFWTGLGGLGVSVPALFILGQ-VNIFQ-GVEEWCFGFLIGALGLAGNMFLVKGACMTNPGKMISLLSVELVTAYILQISVFKT 389
BLAST of transmembrane protein 20 vs. nr
Match: gi|1325292948|ref|XP_023330177.1| (solute carrier family 35 member G1-like [Eurytemora affinis]) HSP 1 Score: 101.679 bits (252), Expect = 3.868e-19 Identity = 89/369 (24.12%), Postives = 167/369 (45.26%), Query Frame = 0 Query: 56 PEPWYTGIFCCFPSRSAREASFGIVLVVLAGLSFTLANVIQKIVAPELSFWHLLFYRATFQIVVMGLALIRLRLSPLPTAEWGLRIRLVVQGLLGGLLLLCIFISIKSVPLGNASSIFFCTPVFTFIFAVCMLNERMASYRTMISIFMITGVVLITRPPFVFPTPDTLDIQCPERGNVTNHTLTSSEKSNGADHGIDLGANELPSLAGNCSGGQAHSELKAYNDSTTIGYMCCVCVPLLSAVVSIMTRQL-KTFHPSVLMFWFACGAFLVGTTGVTWMNQWSHLFHLGTLDWIYVLAILVLGIFGNVAYTIAVRFVSPSKANVFRSFEVILNFILQ-VELEHTPLFPSNFVGIFLLLLAVVSTGFESEV 422 PE G CC S G++L +G+ T + + K + E+ ++ R T Q V++G + S + E + + L + GGL +L IF S+ +PLG++++I F +PVF +F++ +L E+ ++ ++TGVVLI++PPF+F + T D +V +TL +C C L+SA+ ++T+++ K +V+MF+ G + G G+ + S + +W L I LG+ + +AV +PS+ V R ++IL +I+Q V + TP + + +G +++L +++T E+++ Sbjct: 70 PEKMEIGRNCC-------NRSTGLLLAFASGILMTAYSAMIKFL-DEMDSMQVVIIRGTMQAVILGSVAAYNKSSFIGKRERWVPLLLFLVAFTGGLRILFIFTSVSRLPLGDSTTILFSSPVFVMVFSIFLLKEKCGVFKLFAGSALVTGVVLISKPPFIFGSTGTQDY------DVLGYTL-----------------------------------------------VCLAC--LMSALGVVLTKKITKQVDKNVIMFYLGVGTVVCGFIGLFGFGKPS---NPPAWEWALSLGISGLGMLQQYLFVMAVTLETPSRVTVVRQSQIILAYIVQAVFFDLTPGW-MDILGAGIIVLTILTTTAENQI 371
BLAST of transmembrane protein 20 vs. nr
Match: gi|1070149064|ref|XP_018357586.1| (PREDICTED: solute carrier family 35 member G1-like [Trachymyrmex cornetzi] >gi|1009407551|gb|KYN26964.1| Transmembrane protein 20 [Trachymyrmex cornetzi]) HSP 1 Score: 97.8265 bits (242), Expect = 1.867e-18 Identity = 94/356 (26.40%), Postives = 156/356 (43.82%), Query Frame = 0 Query: 77 FGIVLVVLAGLSFTLANVIQKI---VAPELSFWHLLFYRATFQIVVMGLALIRLRLSPLPTAEWGLRIRLVVQGLLGGLLLLCIFISIKSVPLGNASSIFFCTPVFTFIFAVCMLNERMASYRTMISIFMITGVVLITRPPFVFPTPDTLDIQCPERGNVTNHTLTSSEKSNGADHGIDLGANELPSLAGNCSGGQAHSELKAYNDSTTIGYMCCVCVPLLSAVVSIMTRQLKTFHPSVLMF----W-FACGAFLVGTTGVTWMNQWSHLFHL--GTLDWIYVLAILVLGIFGNVAYTIAVRFVSPSKANVFRSFEVILNFILQVELEHTPLFPSNFVGIFLLLLAVVSTGFESEV 422 +G+ L ++G FT+++ + K V P + LL RA QI+ M A++ R S G RI + QGL+GG+ L ++ S + +PLG+A++I F +PV + L E R ++ ++TGV+L+ RPPF+F Q H ++YN +GY+C + L +A+ ++ R+ H S+L+ W FA F T + H F L W +L + + G+ G V T A++ S K +V RS ++IL +++QV L ++ G L++ +VV GFE E+ Sbjct: 38 YGVFLAFISGTFFTISSALVKAIRNVDPMI----LLAIRALMQILTM--AVVACRSSSNLFGPSGQRILIHFQGLVGGMTLSLLYYSFRELPLGDATTIIFSSPVIVIALSFLFLKEPCGVLRILVVCTLLTGVILVARPPFLF---------------------------------------------------QMHRT-ESYN---LMGYLCAILATLFTALNIVVMRKCSEIHYSILVLNLSCWSFASAVFFYFTVSGHGIGHELHKFRLPHDWFTWGQILLVALTGLTGQVLVTKALKIESAGKVSVTRSLDIILAYLIQVYLFGEKPTSTSLTGAILIISSVVCMGFEKEI 332
BLAST of transmembrane protein 20 vs. nr
Match: gi|1009420178|gb|KYN38687.1| (Transmembrane protein 20 [Trachymyrmex septentrionalis]) HSP 1 Score: 97.4413 bits (241), Expect = 2.712e-18 Identity = 93/356 (26.12%), Postives = 155/356 (43.54%), Query Frame = 0 Query: 77 FGIVLVVLAGLSFTLANVIQKI---VAPELSFWHLLFYRATFQIVVMGLALIRLRLSPLPTAEWGLRIRLVVQGLLGGLLLLCIFISIKSVPLGNASSIFFCTPVFTFIFAVCMLNERMASYRTMISIFMITGVVLITRPPFVFPTPDTLDIQCPERGNVTNHTLTSSEKSNGADHGIDLGANELPSLAGNCSGGQAHSELKAYNDSTTIGYMCCVCVPLLSAVVSIMTRQLKTFHPSVLMFWFAC-----GAFLVGTTGVTWMNQWSHLFHL--GTLDWIYVLAILVLGIFGNVAYTIAVRFVSPSKANVFRSFEVILNFILQVELEHTPLFPSNFVGIFLLLLAVVSTGFESEV 422 +G+ L ++G FT+++ + K V P + LL RA QI+ M A++ R S G RI + QGL+GG+ L ++ S + +PLG+A++I F +PV + L E R ++ ++TGVVL+ RPPF+F Q H ++YN +GY+C + L +A+ ++ R+ H S+L+ +C F T + H F L W +L + + G+ G V T A++ S K +V RS ++IL +++QV L ++ G L++ +VV GFE E+ Sbjct: 38 YGVFLAFISGTFFTISSALVKAIRNVDPMI----LLVIRALMQILAM--AVVACRSSSNLFGPSGQRILIHFQGLVGGMTLSLLYYSFRELPLGDATTIIFSSPVIVIALSFLFLKEPCGVLRILVVCTLLTGVVLVARPPFLF---------------------------------------------------QMHRA-ESYN---LMGYLCAILATLFTALNIVVMRKCSEIHYSILVLNLSCWSFVSAVFFYFTVSGHGIGHELHKFRLPHDWFTWGQILLVALTGLTGQVLVTKALKIESAGKVSVTRSLDIILAYLIQVYLFGEKPTSTSLTGAILIISSVVCMGFEKEI 332
BLAST of transmembrane protein 20 vs. nr
Match: gi|1068398544|ref|XP_018047448.1| (PREDICTED: solute carrier family 35 member G1-like [Atta colombica] >gi|1009358369|gb|KYM83577.1| Transmembrane protein 20 [Atta colombica]) HSP 1 Score: 97.0561 bits (240), Expect = 3.019e-18 Identity = 92/356 (25.84%), Postives = 158/356 (44.38%), Query Frame = 0 Query: 77 FGIVLVVLAGLSFTLANVIQKI---VAPELSFWHLLFYRATFQIVVMGLALIRLRLSPLPTAEWGLRIRLVVQGLLGGLLLLCIFISIKSVPLGNASSIFFCTPVFTFIFAVCMLNERMASYRTMISIFMITGVVLITRPPFVFPTPDTLDIQCPERGNVTNHTLTSSEKSNGADHGIDLGANELPSLAGNCSGGQAHSELKAYNDSTTIGYMCCVCVPLLSAVVSIMTRQLKTFHPSVLMFWFACGAFLVG-----TTGVTWMNQWSHLFHL--GTLDWIYVLAILVLGIFGNVAYTIAVRFVSPSKANVFRSFEVILNFILQVELEHTPLFPSNFVGIFLLLLAVVSTGFESEV 422 +G+ L ++G FT+++ + K V P + LL RA QI+ M A++ + S G RI + QGL+GG+ L ++ S + +PLG+A++I F +PV + L E R ++ ++TGVVL+ RPPF+F Q H ++YN +GY+C + L +A+ ++ R+ H S+L+ +C +F+ T ++ H F L W +L + + G+ G V T A++ S K +V RS ++IL +++QV L ++ G L++ +VV GFE E+ Sbjct: 37 YGVFLAFISGTFFTISSALVKAIRHVDPMI----LLVIRALTQILAM--AVVACKSSSNLFGPSGQRILIHFQGLVGGMTLSLLYYSFRELPLGDATTIIFSSPVIVIALSFLFLKEPCGVLRILVVCTLLTGVVLVARPPFLF---------------------------------------------------QMHRA-ESYN---LMGYLCAILATLFTALNIVVMRKCSEIHYSILVLNLSCWSFVSAVVFYFTVSRHGIDHELHKFRLPHDWFTWSQILLVALTGLTGQVLVTKALKIESAGKVSVTRSLDIILAYLIQVYLFGEKPTSTSLTGAILIISSVVCMGFEKEI 331 The following BLAST results are available for this feature:
BLAST of transmembrane protein 20 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 3
BLAST of transmembrane protein 20 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 2
BLAST of transmembrane protein 20 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold628_size122696:49481..52536+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold628_size122696-snap-gene-0.30 ID=maker-scaffold628_size122696-snap-gene-0.30|Name=transmembrane protein 20|organism=Tigriopus kingsejongensis|type=gene|length=3056bp|location=Sequence derived from alignment at scaffold628_size122696:49481..52536+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'transmembrane protein 20' has the following synonyms
Add to Basket
|