hypothetical protein DAPPUDRAFT_316118, maker-scaffold632_size121914-snap-gene-0.24 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of hypothetical protein DAPPUDRAFT_316118 vs. L. salmonis genes
Match: EMLSAG00000008008 (supercontig:LSalAtl2s:LSalAtl2s475:416557:418035:1 gene:EMLSAG00000008008 transcript:EMLSAT00000008008 description:"augustus_masked-LSalAtl2s475-processed-gene-4.1") HSP 1 Score: 72.0182 bits (175), Expect = 7.688e-16 Identity = 25/43 (58.14%), Postives = 35/43 (81.40%), Query Frame = 0 Query: 313 WCNPIKPMGAWLNFRNMKIWCADHGFTKFGPYGGVPTKDAPKA 355 WC+P PMGAW+N+ N++ WCA++G+T FGPYGGVP+ D +A Sbjct: 67 WCDPKDPMGAWMNYINVRKWCAENGYTNFGPYGGVPSDDQEEA 109
BLAST of hypothetical protein DAPPUDRAFT_316118 vs. SwissProt
Match: gi|296439390|sp|Q9UP83.3|COG5_HUMAN (RecName: Full=Conserved oligomeric Golgi complex subunit 5; Short=COG complex subunit 5; AltName: Full=13S Golgi transport complex 90 kDa subunit; Short=GTC-90; AltName: Full=Component of oligomeric Golgi complex 5; AltName: Full=Golgi transport complex 1) HSP 1 Score: 56.225 bits (134), Expect = 3.114e-7 Identity = 29/77 (37.66%), Postives = 46/77 (59.74%), Query Frame = 0 Query: 4 LSQAEQTLDRGIQDQVSTHYEDLLSQATSVEQLESHLDMMESHMESLMATSERLRAQVREPHRVLRTQVLTLGRLQA 80 L+Q LDR + QV +EDLL+QAT +E LE L MM++ + +L +R++A++ EP+ + + L RLQ Sbjct: 95 LAQGISQLDRELHLQVVARHEDLLAQATGIESLEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQV 171
BLAST of hypothetical protein DAPPUDRAFT_316118 vs. nr
Match: gi|1022759515|gb|KZS05845.1| (Oligomeric Golgi complex subunit 5 [Daphnia magna]) HSP 1 Score: 82.8037 bits (203), Expect = 2.319e-13 Identity = 39/71 (54.93%), Postives = 53/71 (74.65%), Query Frame = 0 Query: 11 LDRGIQDQVSTHYEDLLSQATSVEQLESHLDMMESHMESLMATSERLRAQVREPHRVLRTQVLTLGRLQAT 81 LD+ IQ+QVS HYEDLL AT +E LE+ L MM++H++S A+ ER+RA++ EPH L+TQ L L RLQ + Sbjct: 54 LDKTIQNQVSEHYEDLLKHATGIETLENVLSMMQNHIQSFSASIERIRARITEPHDKLQTQTLMLSRLQLS 124
BLAST of hypothetical protein DAPPUDRAFT_316118 vs. nr
Match: gi|321472138|gb|EFX83109.1| (hypothetical protein DAPPUDRAFT_316118 [Daphnia pulex]) HSP 1 Score: 80.8777 bits (198), Expect = 9.620e-13 Identity = 37/71 (52.11%), Postives = 52/71 (73.24%), Query Frame = 0 Query: 11 LDRGIQDQVSTHYEDLLSQATSVEQLESHLDMMESHMESLMATSERLRAQVREPHRVLRTQVLTLGRLQAT 81 LD+ IQ+QVS HYEDLL A+ +E LE+ L MM++H++S A+ ERL+ ++ EPH L+TQ L L RLQ + Sbjct: 55 LDKAIQNQVSEHYEDLLKHASGIETLENVLSMMQNHIQSFSASIERLKTRISEPHNKLQTQTLMLSRLQLS 125
BLAST of hypothetical protein DAPPUDRAFT_316118 vs. nr
Match: gi|1325289327|ref|XP_023329435.1| (uncharacterized protein LOC111702098 [Eurytemora affinis]) HSP 1 Score: 70.0922 bits (170), Expect = 5.289e-11 Identity = 30/58 (51.72%), Postives = 35/58 (60.34%), Query Frame = 0 Query: 295 EDPAMQEDIDAN----GDGIPDWCNPIKPMGAWLNFRNMKIWCADHGFTKFGPYGGVP 348 EDP +D G IP WCNP PMGAWL F+ +K+ C + GF FGPYGGVP Sbjct: 58 EDPMAPPPLDGEAADAGSDIPTWCNPADPMGAWLLFKGVKLNCVEKGFEDFGPYGGVP 115
BLAST of hypothetical protein DAPPUDRAFT_316118 vs. nr
Match: gi|817071785|ref|XP_012257972.1| (conserved oligomeric Golgi complex subunit 5 isoform X1 [Athalia rosae]) HSP 1 Score: 73.559 bits (179), Expect = 2.429e-10 Identity = 38/81 (46.91%), Postives = 53/81 (65.43%), Query Frame = 0 Query: 1 MQDLSQAEQTLDRGIQDQVSTHYEDLLSQATSVEQLESHLDMMESHMESLMATSERLRAQVREPHRVLRTQVLTLGRLQAT 81 + L QA LD +Q+QV ++EDLLSQAT VE+LE L M++H++SL++ ERLR ++ EP + TQ L L RL T Sbjct: 39 LNKLGQAIAVLDTELQNQVLANHEDLLSQATWVEKLEGVLSAMQAHVQSLLSAVERLRGKIVEPFNRIETQTLVLARLHET 119
BLAST of hypothetical protein DAPPUDRAFT_316118 vs. nr
Match: gi|1183221601|ref|XP_020708664.1| (conserved oligomeric Golgi complex subunit 5 isoform X2 [Athalia rosae]) HSP 1 Score: 73.1738 bits (178), Expect = 2.861e-10 Identity = 38/81 (46.91%), Postives = 53/81 (65.43%), Query Frame = 0 Query: 1 MQDLSQAEQTLDRGIQDQVSTHYEDLLSQATSVEQLESHLDMMESHMESLMATSERLRAQVREPHRVLRTQVLTLGRLQAT 81 + L QA LD +Q+QV ++EDLLSQAT VE+LE L M++H++SL++ ERLR ++ EP + TQ L L RL T Sbjct: 39 LNKLGQAIAVLDTELQNQVLANHEDLLSQATWVEKLEGVLSAMQAHVQSLLSAVERLRGKIVEPFNRIETQTLVLARLHET 119
BLAST of hypothetical protein DAPPUDRAFT_316118 vs. nr
Match: gi|998508054|ref|XP_015514383.1| (PREDICTED: conserved oligomeric Golgi complex subunit 5 isoform X1 [Neodiprion lecontei]) HSP 1 Score: 72.7886 bits (177), Expect = 3.965e-10 Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 0 Query: 1 MQDLSQAEQTLDRGIQDQVSTHYEDLLSQATSVEQLESHLDMMESHMESLMATSERLRAQVREPHRVLRTQVLTLGRLQAT 81 + L+QA LD +Q+QV ++EDLLSQ T VE+LE L M++H++SL++ ERLR ++ EP + TQ L L RL T Sbjct: 39 LNKLAQAITVLDAELQNQVLANHEDLLSQVTWVEKLEGVLSTMQAHVQSLLSAVERLRGKIVEPFNRIETQTLVLSRLHET 119
BLAST of hypothetical protein DAPPUDRAFT_316118 vs. nr
Match: gi|998508056|ref|XP_015514384.1| (PREDICTED: conserved oligomeric Golgi complex subunit 5 isoform X2 [Neodiprion lecontei]) HSP 1 Score: 72.7886 bits (177), Expect = 3.998e-10 Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 0 Query: 1 MQDLSQAEQTLDRGIQDQVSTHYEDLLSQATSVEQLESHLDMMESHMESLMATSERLRAQVREPHRVLRTQVLTLGRLQAT 81 + L+QA LD +Q+QV ++EDLLSQ T VE+LE L M++H++SL++ ERLR ++ EP + TQ L L RL T Sbjct: 39 LNKLAQAITVLDAELQNQVLANHEDLLSQVTWVEKLEGVLSTMQAHVQSLLSAVERLRGKIVEPFNRIETQTLVLSRLHET 119
BLAST of hypothetical protein DAPPUDRAFT_316118 vs. nr
Match: gi|805815052|ref|XP_012148379.1| (PREDICTED: conserved oligomeric Golgi complex subunit 5 isoform X1 [Megachile rotundata] >gi|805815055|ref|XP_012148380.1| PREDICTED: conserved oligomeric Golgi complex subunit 5 isoform X1 [Megachile rotundata]) HSP 1 Score: 72.0182 bits (175), Expect = 8.710e-10 Identity = 36/81 (44.44%), Postives = 54/81 (66.67%), Query Frame = 0 Query: 1 MQDLSQAEQTLDRGIQDQVSTHYEDLLSQATSVEQLESHLDMMESHMESLMATSERLRAQVREPHRVLRTQVLTLGRLQAT 81 + L QA + L+ +Q QV ++EDLLSQAT VE+LE L +M+SH++SL++ ERLR ++ +P + TQ + L RL T Sbjct: 39 INKLGQAIEILNNELQKQVLANHEDLLSQATWVEKLEGVLSIMQSHVQSLLSAVERLRGKIVDPFNRIETQTIVLARLHET 119
BLAST of hypothetical protein DAPPUDRAFT_316118 vs. nr
Match: gi|1000739436|ref|XP_015592290.1| (PREDICTED: conserved oligomeric Golgi complex subunit 5 isoform X1 [Cephus cinctus]) HSP 1 Score: 71.633 bits (174), Expect = 9.431e-10 Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 0 Query: 1 MQDLSQAEQTLDRGIQDQVSTHYEDLLSQATSVEQLESHLDMMESHMESLMATSERLRAQVREPHRVLRTQVLTLGRLQAT 81 + L QA LD +Q QV ++EDLLSQAT VE+LE L +M++H++SL++ ERLR ++ EP + TQ + L RL T Sbjct: 39 LNKLGQAIAVLDTELQKQVLANHEDLLSQATWVEKLEDVLSIMQAHVQSLLSAVERLRGKIVEPFNRIETQTIMLSRLHET 119
BLAST of hypothetical protein DAPPUDRAFT_316118 vs. nr
Match: gi|1339059940|ref|XP_023718538.1| (conserved oligomeric Golgi complex subunit 5 [Cryptotermes secundus]) HSP 1 Score: 71.2478 bits (173), Expect = 1.295e-9 Identity = 35/81 (43.21%), Postives = 56/81 (69.14%), Query Frame = 0 Query: 1 MQDLSQAEQTLDRGIQDQVSTHYEDLLSQATSVEQLESHLDMMESHMESLMATSERLRAQVREPHRVLRTQVLTLGRLQAT 81 ++ L++ LD+ +Q QV ++EDLLSQAT VE+LE L +M++H++ L++ ERLRA++ EP+ + Q + L RL AT Sbjct: 33 LKKLTEGITLLDKELQGQVLANHEDLLSQATWVEKLEGVLAVMQTHVQCLLSAVERLRAKIVEPYNKIELQTVMLSRLHAT 113 The following BLAST results are available for this feature:
BLAST of hypothetical protein DAPPUDRAFT_316118 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of hypothetical protein DAPPUDRAFT_316118 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 1
BLAST of hypothetical protein DAPPUDRAFT_316118 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold632_size121914:51835..58309- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold632_size121914-snap-gene-0.24 ID=maker-scaffold632_size121914-snap-gene-0.24|Name=hypothetical protein DAPPUDRAFT_316118|organism=Tigriopus kingsejongensis|type=gene|length=6475bp|location=Sequence derived from alignment at scaffold632_size121914:51835..58309- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'hypothetical protein DAPPUDRAFT_316118' has the following synonyms
Add to Basket
|