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Associated RNAi Experiments
Homology
BLAST of kelch domain-containing protein 8b-like vs. L. salmonis genes
Match: EMLSAG00000009936 (supercontig:LSalAtl2s:LSalAtl2s649:15837:16652:-1 gene:EMLSAG00000009936 transcript:EMLSAT00000009936 description:"augustus_masked-LSalAtl2s649-processed-gene-0.0") HSP 1 Score: 48.9062 bits (115), Expect = 4.340e-7 Identity = 43/186 (23.12%), Postives = 75/186 (40.32%), Query Frame = 0
Query: 61 LVWVFGGDEANSVEVLDVT-----TQDACKIPSNLPWDEPTFGAFGFFDGRHPVICSGRNG---NQCLHWDGSIWSDY--FPNPAGLDQIIPEYSAIAQHGLDTLWITGGKSVDSAAAIKNTRFLHQKFGFAPGPDLPDARYGHCLVPLIPGHQYLLVG--GMP-----FTRSVYLFVEGHWYPQQ 229
L +++G D ++D+ + + +P N P + + F +G+ V R+G + C + + W + P P +++ + W+TGG S + + K + GP +P YGHCLVPL LL G +P + + VY+F G W Q+
Sbjct: 21 LKYLYGPDSEGKASIVDLNPGKPVSSCSLNLP-NFPIPDLKCTSTTFIEGKLTVCGGSRSGFTSSHCFRLENNAWVKFPSLPEPRTCA------TSMWINNGTQWWLTGGSGPHSRSVSSGIVYDVSKGAWETGPKIPIVSYGHCLVPLKDDRVXLLGGWRKIPIIKPIYNKDVYIFENGEWVKQE 199
The following BLAST results are available for this feature:
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold64_size435223 | supercontig | scaffold64_size435223:171273..175225 + |
Analyses
This gene is derived from or has results from the following analyses
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold64_size435223:171273..175225+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below. >maker-scaffold64_size435223-snap-gene-2.18 ID=maker-scaffold64_size435223-snap-gene-2.18|Name=kelch domain-containing protein 8b-like|organism=Tigriopus kingsejongensis|type=gene|length=3953bp|location=Sequence derived from alignment at scaffold64_size435223:171273..175225+ (Tigriopus kingsejongensis)
CTCAACATGGAATCCATGGATGTGAGTGACTTAAGACCCAGGACAAAAAC
TCGAAGCAAAGGCCTCCTGTGCCTTCTGTTTGTCTTCATTGTGCTCGTCG
GCAACTCCTTGGCTTTGGCCTTGGTTCACATTTTGGTTCTCCCATATTTT
CACAAGCAAGGTGAGGTAGTATACTGTATGAAATACATTTAATGTTTTTT
TAAATGTACCTGCACATACCAATATTTTAGCTTATGAAAGCCCAAATGCC
GACGGTTTGGTCTGGGTTTTTGGGGGCGATGAAGCCAACTCAGTGGAAGT
TTTGGATGTGACAACTCAAGACGCATGCAAAATCCCCTCCAATCTGCCTT
GGGATGAACCGACTTTTGGTGCATTCGGTTTTTTCGACGGCAGACATCCG
GTGATTTGTAGTGGACGCAATGGGAACCAATGTCTGCATTGGGATGGCTC
CATTTGGAGCGATTATTTTCCAAACCCAGCTGGGCTCGATCAGATCATTC
CCGAGTACTCGGCCATTGCTCAACACGGGCTGGACACCCTCTGGATAACG
GGTAAAACTGTATTTTCATCATTGTATATTGATTTTTATATAGACCTAGT
TGTTTTTAGTGGACATGTTTGTTTTAAGAGGCCACAGGGATTTCTGCCCT
AGCGTCCATGATAGTGTCTAGGTGGGACATGAGTGAATGATAAGGGATCC
CTTATCTGATACCCTTGGTGTGACTAGATACCTAAATATTAACAGAGATA
CATGTGCTATACGAGATCTATCAATAAGTAAGAGCCTCAAAGTGAAAGTG
GAACACTACCGGTATTTACAAGGACCAAACCTTGATTTCGTTACGATTTC
TTTGTCACCATTGAAATCTTAGTTCACCGTTAGATGGGGCTGACACGATC
CTTCGTCACCAAGGATAGGTTATCGTTCAGATAAATAGTTCCGTTTTATT
TTGAGATTGTCACTAGGTGAAACCTTGTCATCGAGTGGCAATCAGTGTAG
CGCAATGGTAGAGTGACAGACTCAGTCAACTGTCATTGCGTAATCCGAGC
GTCGTTGGTTCAACCCCCGGGCTTGCCAAGTTCCGGCAACTAGTTGTGTT
AACTCATAACTAGGGCTTTAAAAAAAGGCAGTAAAAACACCCAAAAAAGC
GCTGGAAACAGCCGAAAAAAGTGTCGTTTCCAGCAAATAACACTGAAAAA
AACAGCTTTCCAGCAAACCAAAAAAAACACGAAACCTTGAAAAACAAAAT
CGCTGGAAACCAAAAAAATAGCTCATCACGGGAGGAAGCACCCCACTTAG
TAGCAAAATAACTCAGGAAAAATATCCAAATTCAAATATGTGAGAACTTT
TTTTGAGAATTATTGTTACTGGCAGATTTAGATAAATATAAGTAAATTAA
ATTCGCATATGAGGAAATCCAAGCCATTTTGACACCACAAAAAATAACAC
AAGTGAAGTCTTCAGAGGGCTTCAACTCTTTTTTTTTTAAGGCTATATAT
CAAAAGTTAAAGAAAAATGGTGACCAGCAGTATTTTCACAACTGTCCAGT
AATTCACAATTAGACACGCAGCATCAAGCTACCAACGCCCAATTTTGGGA
AAAACATTACTGAATCTGTGAAAAATACCCCTCTTACAACACTGGTATCA
ATAGGAATGGTGCCACGAATTCGCACATGCTTGTCCTGGTTAATTAAAGA
AACGCTGGAACCACATGAAAAACGAAGAAAAAAAGCCCAGCTGAATAAAA
CTGAAATCCTGCTTAAATCCGCAGTGTTTTTAAGTAGTTTTGACTCTAGG
TTCAAAATTTTCATTCATTTTGACGGTCTTGCAACCATTAATTGGCCGAT
ATCATTGGCTTTTCCCAGCAAAAACGCTGATTTCCAGCATTTCAGACCAT
TTCCAGCATTTCAGACCATTTCCAGCATTTCAGACCATTTCCAGCATTTC
CCACTTTTTCCAGCAAAAAAGAAACAAAAAGGTCTTCCCAGCCTTTGACA
GCGTTACTCATAACTATTGTTTACTATCTTACGGGATTACAGTTGGCGTA
ACTGTGGTCATTCCTCGAGGGTAAGGTGATCATTCATGATAAATTTGTCA
GACGGTTGACTATGTTTCCTCGGAGATTTCCCTAGCTTGGCAGAAAAAAA
AGGTTTGCATTGTCATCACTATGTTCATATTAGGCTCTCTAGGCAAGACC
TAGCCCAACCCAATAGCTAATTGTATCATAAAATTATCACTCAAGGAATG
ATCCTAGTGTGCCAAAAATAAAAGAATGCTTTGTCTGAAATACCAGGGAT
GATATTTGTCGAAAATACCAGGGATGATATTTGTCGAAAATACCAGGGAA
CTTGTTCATTCCGGGAATTAAACCAAAGACCAACACATTTATCAACGACT
GATTGTGCCGATGTACCACTGCCTGCCTCAAAATGGGTACATGAAGCTGT
TTGATTTGTATTGAAGCAGACCACAATGCTTGTGAGGTTGCGAGACGGAT
TTGAACAATTTTGCGCAAAATTGATAATTATTGTAACGACTATTATGTGT
TTTGCTTGAAATTGAAATTGCTTTTGGAATAAAGGTACGAACAATCACTG
CACTTGGCCATTTATTAGGTTAGCAGGTGATCTTGAGCAGAAACCGAAAT
TTTGCATTATCCCAATGCCTTCGAGTTGCTTATAGTTGGACATTTAAAGC
ACATATGCTATTTTGGCATATTTCCTTCACCCCTCCAAACAGATTTTAAT
CACTATTTGACGTCATCCTGTTCACAATAAATGTCACATACTGTGGCAAC
AAATTTGCTCAAAGTCTCACCATGATGGTAATTGTTCGGATGGAGTTGCA
ATTTCTTGACCACTTTGAGTCTACCTCTGTAGTCTGTACAATGTAACATG
CTTGAAAAGAACATAAACAAGATATAAATAGATGAAAGATTCAAAATGTG
TAAGGAATACCAGGTAAAGAAACAGCGTTGTGAATTCAATTGCACAAAAT
TGGCTTTTTCCAACCCTACCCTTTTTGTCCTCAAATCGAAACTCACGGAA
CAAGTCACGACTCGAATGAATGGAATGCACTTTTGCCAGCTACGTATATT
ACGGAACAACGTACATGTATTTATTAAGTTACATATTTAGCGAATTTCAT
TATCATGGCGTTATGACGACTGTGGTCATTTTCCCAACAATCATTTCAGA
ACCTGAATTCGACTTCTAATCTCTGATGAGTTTCCTAGATATTGACATTA
GTTGATGCCTAACAAATTAGACCTACTGTACATATAACAGTCCAAAAATC
GGATATTTTCTCAATTTTTTGAGTTTTCGTTGATACTGGAGAGAAATAGA
ACCGAACAACGCCTAAAAAGTAACGGAACCAGCTGTTTGAGATTGATAAT
GTAGACAATCGTATATCCAAGAGGTGGCGTTCCATACTGTACATAACGTT
GTGCACATAAATGTAAAACAAGACGTTAGGTAGTGGCATCATGAATCATG
AATATAATCATCAACTCAATATCGAGGAACAAAAAGAGCAATTGTGAGCT
GAAGGAACGACACCTAGAACATACTTTATTAAGCGGCCCACCAAAAATAC
ACAATCCAATAATGGCAATCTCCTCAGGTGGAAAATCGGTGGACTCTGCA
GCAGCGATCAAGAATACACGATTCCTACACCAAAAGTTTGGATTTGCGCC
AGGACCCGATCTACCGGATGCTCGCTATGGTCACTGTCTGGTTCCGTTGA
TCCCGGGACATCAATATTTATTGGTGGGTGGGATGCCATTCACACGATCC
GTCTACCTCTTTGTGGAGGGTCATTGGTATCCACAACAAAGCCTCGAGGA
GGCTCGTCATGGACCCGCCTGTGCCAAAGTGTTCCATCCTAATGGAGTAA
CCACTCTGGTGGTGGTGGCTGGCGGCTACAATCAATATGGGAGTTCCTCT
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Synonyms
The feature 'kelch domain-containing protein 8b-like' has the following synonyms
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