polymerase delta-interacting protein 3, maker-scaffold676_size113663-snap-gene-0.27 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of polymerase delta-interacting protein 3 vs. L. salmonis genes
Match: EMLSAG00000001347 (supercontig:LSalAtl2s:LSalAtl2s1228:18575:23247:1 gene:EMLSAG00000001347 transcript:EMLSAT00000001347 description:"augustus_masked-LSalAtl2s1228-processed-gene-0.2") HSP 1 Score: 240.736 bits (613), Expect = 1.510e-75 Identity = 164/382 (42.93%), Postives = 220/382 (57.59%), Query Frame = 0 Query: 15 TRGPVRTGVPDARFKLIAQNRSQIRDARDRLASLAQGQDARKKLEKIRNLKAGKLEEKRTRNGAVTITQTLRGQTVLTTQRKARELAQKTQKKPVRAGPAAPAAGGAIKRRVGRGGAIRLSTQTGETPRPTAPVRRGARTTAPAPARVRPLTRTIRGEMSQAAQLDAELLNTHVDPVVLKRTIKQSMRRSSPPSSRPR-YEPL-----DMDY------DRVERRRERSRSPMAMM--YYDQPRETRYAPLHPPRRRYNDYDDPRAAQPREDDVYRRRMLKNEDRYERSP----RTMGDRLDTG-VSPLQGAKIVVSNLQASVSPEDILELFGDIGPLKRSKIIESGTAEVVFVNRSDAIKAVEIYHNRQLDGKAMKCHLVGS 377 +G + DAR ++I++NR I+DARD L A+ DAR+KLEKIRNLK GKL+ K++ NG +TIT T G+ +LTT +K K P AP G K + + +R R P + + PA+ PLTRTIRG M+++A+LD EL+ T VDPV+LKRT++Q++ R P R Y P+ +MDY RR +RSRSP + ++ R RY RR +++ R+D++ RRM K ED P R + D + VSPLQGAK++VSNL +V+ EDI+ELFGD+GPLKR K+ G AEVVFVN+ DA+KAVE YHNRQLDGKAMKC L+GS Sbjct: 4 VKGNKKVSAGDARNRIISKNRLHIKDARDALVKKAKTTDAREKLEKIRNLKKGKLDVKKSANGGITITTTKTGKILLTTSKK---------KNP------APQGNGVAKTILKKKKEVRPIKNLTNNVR-VRPTVKPKQQQQQRPAKQVPLTRTIRGHMTESARLDYELMTTRVDPVILKRTVRQNIARERSPIDEARFYRPMSRRSPEMDYYDSRSRQSRLRRHDRSRSPYEYVPTQFNSSRRNRY-DFDETRRDSHNHSHNNNHMHRDDEIRHRRMYKPEDNNRIYPGSGGRQVNDNMSNNYVSPLQGAKVIVSNLHNAVTQEDIVELFGDVGPLKRVKVSSPGAAEVVFVNKEDAMKAVETYHNRQLDGKAMKCQLIGS 368
BLAST of polymerase delta-interacting protein 3 vs. SwissProt
Match: gi|50403796|sp|Q9BY77.2|PDIP3_HUMAN (RecName: Full=Polymerase delta-interacting protein 3; AltName: Full=46 kDa DNA polymerase delta interaction protein; Short=p46; AltName: Full=S6K1 Aly/REF-like target; Short=SKAR) HSP 1 Score: 90.5077 bits (223), Expect = 2.016e-18 Identity = 58/145 (40.00%), Postives = 80/145 (55.17%), Query Frame = 0 Query: 300 VSPLQGAKIVVSNLQASVSPEDILELFGDIGPLKRSKIIESGTAEVVFVNRSDAIKAVEIYHNRQLDGKAMKCHLVGSSDSHSTGS--TYRPPPL-----PPVSRMESVLRHAQSGGDFPRPVPQPEINAIHRALFADRLDSVTT 437 +SPL+G K+ V+NL V+ EDI+ELF G LKR++++ G AEVVFV + DAI A + Y+NR LDG+ MKC+L H G+ T P L P + ES L + P + + + I +ALF SVTT Sbjct: 274 LSPLEGTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHPGVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNL------HMNGNVITSDQPILLRLSDSPSMKKESELPRRVNSASSSNPPAEVDPDTILKALFKSSGASVTT 412
BLAST of polymerase delta-interacting protein 3 vs. SwissProt
Match: gi|50401030|sp|Q8BG81.1|PDIP3_MOUSE (RecName: Full=Polymerase delta-interacting protein 3; AltName: Full=S6K1 Aly/REF-like target; Short=SKAR) HSP 1 Score: 90.1225 bits (222), Expect = 2.195e-18 Identity = 55/140 (39.29%), Postives = 76/140 (54.29%), Query Frame = 0 Query: 300 VSPLQGAKIVVSNLQASVSPEDILELFGDIGPLKRSKIIESGTAEVVFVNRSDAIKAVEIYHNRQLDGKAMKC--HLVGSSDSHSTGSTYRPPPLPPVSRMESVLRHAQSGGDFPRPVPQPEINAIHRALFADRLDSVTT 437 +SPL+G K+ V+NL V+ EDI+ELF G LKR++++ G AEVVFV + DAI A + Y+NR LDG+ MKC H+ G+ + R P V + + R P P+ + RALF SVTT Sbjct: 274 LSPLEGTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHPGVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLHMNGNVITSDQPILLRLSDSPSVKKESELPRRGNPASSNPPAEVDPD--TVLRALFKSSGASVTT 411
BLAST of polymerase delta-interacting protein 3 vs. SwissProt
Match: gi|75329741|sp|Q8L719.1|THO4B_ARATH (RecName: Full=THO complex subunit 4B; AltName: Full=ALYREF homolog 2; Short=AtALY2) HSP 1 Score: 77.411 bits (189), Expect = 1.446e-14 Identity = 43/86 (50.00%), Postives = 53/86 (61.63%), Query Frame = 0 Query: 299 GVSPLQGAKIVVSNLQASVSPEDILELFGDIGPLKRSKII------ESGTAEVVFVNRSDAIKAVEIYHNRQLDGKAMKCHLVGSS 378 G S G K+ +SNL VS EDI ELF ++G LKR I GTAEVVF R DA+ AV+ Y+N QLDGK MK +VG++ Sbjct: 101 GSSIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGKLMKIEIVGTN 186
BLAST of polymerase delta-interacting protein 3 vs. SwissProt
Match: gi|75329749|sp|Q8L773.1|THO4A_ARATH (RecName: Full=THO complex subunit 4A; AltName: Full=ALYREF homolog 1; Short=AtALY1) HSP 1 Score: 72.4034 bits (176), Expect = 3.710e-13 Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = 0 Query: 305 GAKIVVSNLQASVSPEDILELFGDIGPLKRSKII------ESGTAEVVFVNRSDAIKAVEIYHNRQLDGKAMKCHLVGSS 378 G K+ +SNL V EDI ELF ++G LKR + GTAEVV+ R DA+ AV+ Y++ QLDGK MK +VG++ Sbjct: 87 GTKLYISNLDYGVMNEDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTN 166
BLAST of polymerase delta-interacting protein 3 vs. SwissProt
Match: gi|75332139|sp|Q94EH8.1|THO4C_ARATH (RecName: Full=THO complex subunit 4C; AltName: Full=ALYREF homolog 3; Short=AtALY3) HSP 1 Score: 71.2478 bits (173), Expect = 1.561e-12 Identity = 42/103 (40.78%), Postives = 62/103 (60.19%), Query Frame = 0 Query: 283 DRYERSPRTMGDRLDTGVSPLQ-GAKIVVSNLQASVSPEDILELFGDIGPLKRSKIIE------SGTAEVVFVNRSDAIKAVEIYHNRQLDGKAMKCHLVGSS 378 D YE + R +G VS ++ G + ++NL V+ EDI EL+ +IG LKR I SG+AEVV++ RSDAI+A+ Y+N LDG+ MK ++G + Sbjct: 89 DLYEETLRAVG------VSGVEVGTTVYITNLDQGVTNEDIRELYAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMKLEILGGN 185
BLAST of polymerase delta-interacting protein 3 vs. SwissProt
Match: gi|75324346|sp|Q6NQ72.1|THO4D_ARATH (RecName: Full=THO complex subunit 4D; AltName: Full=ALYREF homolog 4; Short=AtALY4) HSP 1 Score: 65.0846 bits (157), Expect = 1.756e-10 Identity = 35/82 (42.68%), Postives = 53/82 (64.63%), Query Frame = 0 Query: 305 GAKIVVSNLQASVSPEDILELFGDIGPLKRSKIIE------SGTAEVVFVNRSDAIKAVEIYHNRQLDGKAMKCHLVGSSDS 380 G ++ V+NL V+ EDI ELF +IG ++R I SGTAEVV+ RSDA +A++ Y+N LDG+ M+ ++G ++S Sbjct: 92 GTRLHVTNLDQGVTNEDIRELFSEIGEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEILGGNNS 173
BLAST of polymerase delta-interacting protein 3 vs. SwissProt
Match: gi|48474967|sp|Q9JJW6.1|ALRF2_MOUSE (RecName: Full=Aly/REF export factor 2; AltName: Full=Alyref; AltName: Full=RNA and export factor-binding protein 2) HSP 1 Score: 63.929 bits (154), Expect = 1.833e-10 Identity = 38/94 (40.43%), Postives = 52/94 (55.32%), Query Frame = 0 Query: 294 DRLDTGVSPLQG----AKIVVSNLQASVSPEDILELFGDIGPLKRSKIIES------GTAEVVFVNRSDAIKAVEIYHNRQLDGKAMKCHLVGS 377 D D+G +G AK++VSNL VS DI ELF + G LK++ + GTA+V F R+DA+KA++ Y LDG+ M LV S Sbjct: 59 DLFDSGCGGGEGVETGAKLLVSNLDFGVSDADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQLVAS 152
BLAST of polymerase delta-interacting protein 3 vs. SwissProt
Match: gi|82236414|sp|Q6GLW1.1|THO4B_XENLA (RecName: Full=THO complex subunit 4-B; Short=Tho4-B; AltName: Full=Aly/REF export factor-B) HSP 1 Score: 64.3142 bits (155), Expect = 2.043e-10 Identity = 35/88 (39.77%), Postives = 50/88 (56.82%), Query Frame = 0 Query: 296 LDTGVSPLQGAKIVVSNLQASVSPEDILELFGDIGPLKRSKIIES------GTAEVVFVNRSDAIKAVEIYHNRQLDGKAMKCHLVGS 377 TG G K++VSNL VS DI ELF + G LK++ + GTA+V F ++DA+KA++ Y+ LDG++M LV S Sbjct: 95 FGTGAGMETGGKLLVSNLDFGVSDADIQELFAEFGSLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRSMNIQLVTS 182
BLAST of polymerase delta-interacting protein 3 vs. SwissProt
Match: gi|123915952|sp|Q28FB9.1|THOC4_XENTR (RecName: Full=THO complex subunit 4; Short=Tho4; AltName: Full=Aly/REF export factor) HSP 1 Score: 62.7734 bits (151), Expect = 8.459e-10 Identity = 35/88 (39.77%), Postives = 49/88 (55.68%), Query Frame = 0 Query: 296 LDTGVSPLQGAKIVVSNLQASVSPEDILELFGDIGPLKRSKIIES------GTAEVVFVNRSDAIKAVEIYHNRQLDGKAMKCHLVGS 377 TG G K++VSNL VS DI ELF + G LK++ + GTA+V F ++DA+KA++ Y+ LDG+ M LV S Sbjct: 99 FGTGAGMETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTS 186
BLAST of polymerase delta-interacting protein 3 vs. SwissProt
Match: gi|82230182|sp|Q58EA2.1|THO4A_XENLA (RecName: Full=THO complex subunit 4-A; Short=Tho4-A; AltName: Full=Aly/REF export factor-A) HSP 1 Score: 61.2326 bits (147), Expect = 2.533e-9 Identity = 33/79 (41.77%), Postives = 47/79 (59.49%), Query Frame = 0 Query: 305 GAKIVVSNLQASVSPEDILELFGDIGPLKRSKIIES------GTAEVVFVNRSDAIKAVEIYHNRQLDGKAMKCHLVGS 377 G K++VSNL VS DI ELF + G LK++ + GTA+V F ++DA+KA++ Y+ LDG+ M LV S Sbjct: 105 GGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTS 183
BLAST of polymerase delta-interacting protein 3 vs. nr
Match: gi|225711646|gb|ACO11669.1| (Polymerase delta-interacting protein 3 [Caligus rogercresseyi]) HSP 1 Score: 243.432 bits (620), Expect = 7.065e-73 Identity = 168/389 (43.19%), Postives = 222/389 (57.07%), Query Frame = 0 Query: 22 GVPDARFKLIAQNRSQIRDARDRLASLAQGQDARKKLEKIRNLKAGKLEEKRTRNGAVTITQTLRGQTVLTTQRKARELAQKTQKKPVRAGPAAPAAGGAIKRRVGRGGAIRLSTQTGETPRPTAPVRRGARTTAPAPARVR---PLTRTIRGEMSQAAQLDAELLNTHVDPVVLKRTIKQSMRRS-SPPSSRPRYEPL-----DMDYDRVERRRERSRSPMAM----------MYYDQPRETRYAPLHPP-------RRRYNDYDDPRAAQPREDDVYRRRMLKNEDRYERSPRTMGDRLDTG------VSPLQGAKIVVSNLQASVSPEDILELFGDIGPLKRSKIIESGTAEVVFVNRSDAIKAVEIYHNRQLDGKAMKCHLVGSS 378 GV DAR +LI+++R+ I+DARD L A+ DAR+KLEKIR+LK GKLE K++ NG +TIT T G+ +LTT +K K ++ G A A + P P A +G R T RV PLTRTIRG+M+++A+LD EL+NT VDP +LKRT++Q++ R SP S Y P+ ++DY R R RSP+ M +D+ R A + P R R D+D+PR +++ RRM K E+ PR M G VSPLQGAK+VV NL +V+ EDI+ELFGD+GPLKR K++ GTAEVVFVNR DA+KAVE HNRQLDGKAMKC L+G++ Sbjct: 11 GVVDARQRLISKSRASIKDARDTLVKKAKSTDAREKLEKIRHLKNGKLEVKKSANGGITITTTKTGKLLLTTSKK---------KSLIKNGTKASAK------------------KDSRQPAPKAT--KGGRITKAKQQRVSKETPLTRTIRGQMTESARLDYELMNTRVDPAILKRTVRQNVARERSPIDSSRFYRPMSRRSPELDY---YESRSRLRSPLTSRSSRYAASSRMAFDRDRSKSPAYEYVPSTSYGSSRSRRYDFDEPRRDSSMHNEMRSRRMYKPEESSRMYPRQMTSGSSGGGSGGSYVSPLQGAKVVVGNLHNTVTQEDIVELFGDVGPLKRVKVVNPGTAEVVFVNRDDALKAVETCHNRQLDGKAMKCQLIGAN 367
BLAST of polymerase delta-interacting protein 3 vs. nr
Match: gi|1325317482|ref|XP_023340483.1| (nuclear localization sequence-binding protein-like [Eurytemora affinis]) HSP 1 Score: 189.119 bits (479), Expect = 2.960e-51 Identity = 154/423 (36.41%), Postives = 229/423 (54.14%), Query Frame = 0 Query: 25 DARFKLIAQNRSQIRDARDRLASLAQGQDARKKLEKIRNLKAGKLEEKRTRNGAVTITQTLRGQTVLTTQRKARELAQKTQKKPVRAGPAAPAAGGAIKRRVGRGGAIRLSTQTGETPRPTAPVRRGARTTAPAPARVRPLTRTIRGEMSQAAQLDAELLNTHV---DPVVL------KRTIKQSMRRSSPPSSRPRYEPLDMDYDRVERRRERSRSP-----MAMMYYDQPRETRYAPLHPPRRRYNDYDDPRAAQPREDDVYRRRMLKNEDRYERSPRTMGDRLDTG--VSPLQGAKIVVSNLQASVSPEDILELFGDIGPLKRSKIIESGTAEVVFVNRSDAIKAVEIYHNRQLDGKAMKCHLVGSSDS-HSTGSTYRPPPLPPVSRMESVLRHAQSGGDFPRPVPQPEINAIHRALFAD 430 DAR K+I +RS+ DARD+L LA+ DAR+KL K+++ K GK+E K T +T+T+ G+ +LTT + + + + K VR G + V G + LS+ ++ G+R A +R ++ RG M++ +LD EL++ +V D + + K T + S R SP S+R R R + + + R +P R R+ DYD+PR + R++++ R+R KN D Y+ T+G RL+ G VSPLQG+KIV+ NL VS EDI+ELFGD+GPL+R+K+I G AEV FVN + A+KAVEIYHNRQLDGK MKC L+G+ + STG+ + PP S++ ++S G P P++ +IHRALF + Sbjct: 32 DARLKIIQASRSKTIDARDKLGLLAKQTDARQKLLKLKDRKEGKMEVK-TLGSNITMTKKFDGKILLTTNKNKNKAPKVDEAKQVRQV-------GQFMKTVTGSGKVSLSSSNSQSGGGMRSKSNGSR--GSAQSRENQVSHGGRGRMTEQERLDEELMSANVSKEDIIRIRDYRNSKLTDRSSNRSRSPLSARSRSPLRSRSPLRSRSPLRSRSPHRSRSPLRLGGKEDWRRREESPPRRGRGRF-DYDEPR--ESRDEEMLRQRS-KNID-YDEGI-TLGGRLEQGSTVSPLQGSKIVIKNLHVRVSQEDIVELFGDVGPLRRAKLIAPGHAEVTFVNHNHAVKAVEIYHNRQLDGKPMKCQLMGAGSAPISTGTGVKLPP--------SLIGKSKSDG----LGPAPDVESIHRALFFN 426
BLAST of polymerase delta-interacting protein 3 vs. nr
Match: gi|1069793364|ref|XP_018321690.1| (PREDICTED: polymerase delta-interacting protein 3-like [Agrilus planipennis]) HSP 1 Score: 125.176 bits (313), Expect = 6.124e-28 Identity = 125/433 (28.87%), Postives = 195/433 (45.03%), Query Frame = 0 Query: 14 STRGPVRTGVPDARFKLIAQNRSQIRDARDRLASLAQGQDARKKLEKIRNLKAGKLEEKRTRNGAVTITQTL--RGQTVLTTQRKARELAQKTQKKPVRAGPAAPAAGGAIKRRVGRGGAIRLSTQTGETPRPTAPVRRGARTTAPAPARVRPLTRTIRGEMSQAAQLDAELLNTHVD--------PVVLKRTIKQSMR--RSSPPSSRPRYEPLDM-DYDRVERRRERSRSPMAMMYYDQPRETRYAPLHPPRRRYNDYDDPRAAQPREDDVYRRRMLKNEDRY---ERSPRTMGDRLDTGVSPLQGAKIVVSNLQASVSPEDILELFGDIGPLKRSKIIESGTAEVVFVNRSDAIKAVEIYHNRQLDGKAMKCHLVGSSD-SHSTGSTYRPPPL-PPVSRMESVLRHAQSGGDFPRPVPQPEINAIHRALF 428 + R ++T V DAR KLI + R ++DAR+ L++LA+ DAR +LEK+R + R R I QT G+ L T++ R ++ AIK+++G + + +P P +P+ + ++ P TIR + + + + ++ D P L + I+ + R S S R RY + D+ + +P A + D+P E PL P P + +R +L D +S ++ T V G +IVVSNLQ +V+ +DI ELF DIG L ++++ GTAEV++ N DA KAV+ YHNRQLDG+ MKC LV ++ TGS + L P ++ R S + V P+I IH+ LF Sbjct: 27 ANRPNIKTNVTDARQKLIQKKRKNVKDAREVLSNLAKKHDARDRLEKLRETRGVVQTNSRVRAIGANIVQTTDKNGKIALVTKKSKRTVSD---------------ISLAIKQQLGMLPSRKKIGSAKRSP-PKSPINKLSKNVPP----------TIRKTILNDIKYNPDPIHISYDDYQRGYGTPEDLYKWIRPTSRSLNSEMMSERMRYTRHNNPDWPYLPPSSRMPIAPTAYIDLDKPDEDEEMPLVP-------------YSPVSNTSFRASILSRLDSNPPQHQSHGIFANQTKTKVVVPAGHRIVVSNLQQTVTQDDIRELFEDIGQLLVARLVRPGTAEVIYKNLRDAQKAVDTYHNRQLDGQPMKCFLVNKRPLNNPTGSAVQNQELTSPTTK-----RTTMSKTSAEKVV--PDIQTIHKVLF 413
BLAST of polymerase delta-interacting protein 3 vs. nr
Match: gi|642935046|ref|XP_008199919.1| (PREDICTED: polymerase delta-interacting protein 3 isoform X2 [Tribolium castaneum] >gi|270012978|gb|EFA09426.1| hypothetical protein TcasGA2_TC010637 [Tribolium castaneum]) HSP 1 Score: 120.553 bits (301), Expect = 1.808e-26 Identity = 127/417 (30.46%), Postives = 197/417 (47.24%), Query Frame = 0 Query: 23 VPDARFKLIAQNRSQIRDARDRLASLAQGQDARKKLEKIRNLKAGKLEEKRTRNGAVTITQTLRGQTVLTTQRKARELAQKTQKKPVRAGPAAPAAGGAIKRRVGRGGAIRLSTQTGETPRPTAPVRRGARTTAPAPARVRPLTRT-IRGEMSQAAQLDAELLNTHVDPVVLKRTIKQSMRRSSPP---SSRPRYEPLDMDYDRVERRRERSRSPMAMMYYD--QPRETRYAPLHPPRRRYNDYDDPRAAQPREDDVYRRRMLKNEDRYERSPRTMGDRLDTGVSPLQGAKIVVSNLQASVSPEDILELFGDIGPLKRSKIIESGTAEVVFVNRSDAIKAVEIYHNRQLDGKAMKCHLVGSSDSHSTGSTYRP---PPLPPVSRMES--VLRHAQSGGDFPRPVPQPEINAIHRALF 428 V DAR KLI + S ++DARD LA +A+GQDAR KL K+R ++ T NG + + GQ ++ K +++ T K G A I++ +G L T +P+ A VRR A A +RV P T + E+ Q+ L+ T+ DP + K + K MR ++ S R + + + ++SP + D E AP+ P ++ R + +++ R + E+ + + T V G +IVVSNLQ++V+ +D+ ELF DIG L ++++ G AEV++ N DA KAV+ YHNRQLDG+ MKC LV RP P P +++MES +L + G P+++ IH+ LF Sbjct: 37 VQDARQKLIQRKLSTVKDARDVLAKIAKGQDARNKLNKLRQKRSA------TANGNIKVI----GQNIVQKIDKNGKISLVTNKSKSSTGINA-----TIQKELG------LVT----SPKK-AVVRR-----ALAASRVPPTVHTAVLNEIDSYNQM---LVRTY-DPSLYKWS-KPGMRTTASQLIGSLEGRVRGAKGEVFQGWQNFPINKSPHGFIDLDAVDDEEMPMAPIAPIKQTITLQGSSRIS-----NIHSRL----DSPIEQDTHGIFGQPKTKVVVPAGHRIVVSNLQSTVTQDDVKELFEDIGQLLAARLVRPGVAEVIYKNLKDAQKAVDTYHNRQLDGQPMKCLLVNK----------RPLNNPTAPALTKMESQGLLNTIEVSGSSNSNKLVPDLSTIHKVLF 398
BLAST of polymerase delta-interacting protein 3 vs. nr
Match: gi|861648518|gb|KMQ96392.1| (polymerase delta-interacting protein 3 [Lasius niger]) HSP 1 Score: 119.783 bits (299), Expect = 5.967e-26 Identity = 129/408 (31.62%), Postives = 171/408 (41.91%), Query Frame = 0 Query: 13 GSTRGPVRTGVPDARFKLIAQNRSQIRDARDRLASLAQGQDARKKLEKIRNLKAGKLEEKRTRNGAVTITQTLRGQTVLTTQRKARELAQKTQKKPVRAGPAAPAAGGAIKRRVGRGGAIRLSTQTGETPRPTAPVRRGARTTAPAPARV---RPLTRT---IRGEMSQAAQLDAELLNTHVDPVVLKRTIKQSMRRSS---------PPSSRPRYEPLDMDYDRV-------ERRRERSRSPMAMMYYDQPRETRYAPLHPPRRRYNDYDDPRAAQPREDDVYRRRMLKNEDRYERSPRTMG--DRLDTGV--SPLQGA------------------KIVVSNLQASVSPEDILELFGDIGPLKRSKIIESGTAEVVFVNRSDAIKAVEIYHNRQLDGKAMKCHLVG 376 GS RG V DARFK+I +NR ++ DARD+LA +A+ DAR KL+KIR A + +K V+ I R+ GR G RLS T + P P P PAP RV RP + + G+MS D + D L+RT+ + P S +P + R+ ER RER R Y PR + PP Y + + + + + ++ RS R +G RLD+ V S L GA +IVVSNLQA+V+ EDI ELF D+G L S+++ GTAEV++ DA KAVE YHNRQLDG MKC LV Sbjct: 75 GSVRGRGSHVVTDARFKIIQKNREKLTDARDKLAEIAKQSDARLKLDKIR--------------------------------------ASQFKKMDVQLS--------GISRKTGRNG--RLSLSTNKVP-PLMP--HVLPPNIPAPTRVVGYRPPSLSEPHYLGDMSMDYNDDYLM-----DSPSLRRTVSNEYAPTPPPPPPVFNIPTSPYTWVKPTSANVTRIPARKSDIERERERQRD-----YKLVPRSSMTKTASPP------YKEDWSFGTKSRTILAEEIADSKYYDSRSLRDVGVKSRLDSSVNKSRLMGALSRPKASSSTSSTQSTGYRIVVSNLQANVTQEDIKELFEDVGELLVSRLVRPGTAEVIYKTLKDATKAVETYHNRQLDGHPMKCLLVN 415
BLAST of polymerase delta-interacting protein 3 vs. nr
Match: gi|1285011569|ref|XP_023017820.1| (uncharacterized protein LOC111506840 isoform X2 [Leptinotarsa decemlineata]) HSP 1 Score: 119.783 bits (299), Expect = 6.948e-26 Identity = 127/437 (29.06%), Postives = 190/437 (43.48%), Query Frame = 0 Query: 23 VPDARFKLIAQNRSQIRDARDRLASLAQGQDARKKLEKIRNLKAGKLEEKRTRNGAVTITQTLRGQTVLTTQRKARELAQKTQKKPVRAGPAAPAAGGAIKRRVGRGGAIRL-----------STQTGETPRPTAPVRR--------GARTTAPAPARVRPLTRTIR-GEMSQAAQLDAELLNTHVDPVVLKRTIKQSMRRSSPPSSRPRYEPLDMDYDRVERR-----RERSRSPMAMMYYDQPRETRYAPLHPPRRRYNDYDDPRAAQPREDDVYRRRMLKNEDRYERSPRTMGDRLDTGVSPLQGAKIVVSNLQASVSPEDILELFGDIGPLKRSKIIESGTAEVVFVNRSDAIKAVEIYHNRQLDGKAMKCHLVGSSDSHSTGSTYRP---PPLPPVSRMESVLRHAQSGGDFPRPVPQ---PEINAIHRALF 428 V DAR K+I R + DARD L+ +A+ QDAR K+ K+R + RT + + + + G +L + +++ T K A P + AI++++G RL + T E RP +R+ A P P L R + G A+Q+ L V ++ +++ + P + ++ + Y++ R R + P + D+ E PL P R N R + +V+ R D SP + G T V G +IVVSNLQ SV+ +DI ELF DIG L +K++ G AEV++ N DA KAV+ YHNRQLDG+ MKC LV RP P PP+++ ES + P P P+I IH+ LF Sbjct: 45 VQDARTKIIQTKRKTVVDARDVLSKMAKTQDARNKINKMR--------DGRTLLPSTSASVKVIGTNILRKTDRHGKISLVTNK----AKPKS-DINVAIQKQLGLIPNSRLPPRKSASKRNAAVNTQEILRPPVSIRKTILNDMDYNAERLEPIPLYDPALYRWTKPGGRGTASQMINSL---EVTRQAMREALREELSNGWPTYASHNFQKMTGIYNKAPLRSQNLTRTQRLVPSGYVDLDEIEEEEM-PLAPVRSTMNLQGTSRVS-----NVHSRL-----DNSPSSPESHGIFSQTKVVVPAGHRIVVSNLQQSVTQDDIKELFEDIGQLLAAKLVRPGVAEVIYKNLKDAQKAVDTYHNRQLDGQPMKCLLVNK----------RPLNYPTAPPITKSESNFTSRKLPAVSPCPPTNKLVPDIGTIHKVLF 444
BLAST of polymerase delta-interacting protein 3 vs. nr
Match: gi|1285011567|ref|XP_023017819.1| (polymerase delta-interacting protein 3-like isoform X1 [Leptinotarsa decemlineata]) HSP 1 Score: 117.472 bits (293), Expect = 4.931e-25 Identity = 128/438 (29.22%), Postives = 191/438 (43.61%), Query Frame = 0 Query: 23 VPDARFKLIAQNRSQIRDARDRLASLAQGQDARKKLEKIRNLKAGKLEEKRTRNGAVTITQTLRGQTVLTTQRKARELAQKTQKKPVRAGPAAPAAGGAIKRRVGRGGAIRL-----------STQTGETPRPTAPVRR--------GARTTAPAPARVRPLTRTIR-GEMSQAAQLDAELLNTHVDPVVLKRTIKQSMRRSSPP-SSRPRYEPLDMDYDRVERR-----RERSRSPMAMMYYDQPRETRYAPLHPPRRRYNDYDDPRAAQPREDDVYRRRMLKNEDRYERSPRTMGDRLDTGVSPLQGAKIVVSNLQASVSPEDILELFGDIGPLKRSKIIESGTAEVVFVNRSDAIKAVEIYHNRQLDGKAMKCHLVGSSDSHSTGSTYRP---PPLPPVSRMESVLRHAQSGGDFPRPVPQ---PEINAIHRALF 428 V DAR K+I R + DARD L+ +A+ QDAR K+ K+R + RT + + + + G +L + +++ T K A P + AI++++G RL + T E RP +R+ A P P L R + G A+Q+ L V ++ +++ + P +S ++ + Y++ R R + P + D+ E PL P R N R + +V+ R D SP + G T V G +IVVSNLQ SV+ +DI ELF DIG L +K++ G AEV++ N DA KAV+ YHNRQLDG+ MKC LV RP P PP+++ ES + P P P+I IH+ LF Sbjct: 45 VQDARTKIIQTKRKTVVDARDVLSKMAKTQDARNKINKMR--------DGRTLLPSTSASVKVIGTNILRKTDRHGKISLVTNK----AKPKS-DINVAIQKQLGLIPNSRLPPRKSASKRNAAVNTQEILRPPVSIRKTILNDMDYNAERLEPIPLYDPALYRWTKPGGRGTASQMINSL---EVTRQAMREALREELSNGWPTYASHNSFQKMTGIYNKAPLRSQNLTRTQRLVPSGYVDLDEIEEEEM-PLAPVRSTMNLQGTSRVS-----NVHSRL-----DNSPSSPESHGIFSQTKVVVPAGHRIVVSNLQQSVTQDDIKELFEDIGQLLAAKLVRPGVAEVIYKNLKDAQKAVDTYHNRQLDGQPMKCLLVNK----------RPLNYPTAPPITKSESNFTSRKLPAVSPCPPTNKLVPDIGTIHKVLF 445
BLAST of polymerase delta-interacting protein 3 vs. nr
Match: gi|1285011571|ref|XP_023017822.1| (polymerase delta-interacting protein 3-like isoform X3 [Leptinotarsa decemlineata]) HSP 1 Score: 115.931 bits (289), Expect = 1.323e-24 Identity = 126/432 (29.17%), Postives = 186/432 (43.06%), Query Frame = 0 Query: 23 VPDARFKLIAQNRSQIRDARDRLASLAQGQDARKKLEKIRNLKAGKLEEKRTRNGAVTITQTLRGQTVLTTQRKARELAQKTQKKPVRAGPAAPAAGGAIKRRVGRGGAIRL-----------STQTGETPRPTAPVRR--------GARTTAPAPARVRPLTRTIR-GEMSQAAQLDAELLNTHVDPVVLKRTIKQSMRRSSPPSSRPRYEPLDMDYDRVERRRERSRSPMAMMYYDQPRETRYAPLHPPRRRYNDYDDPRAAQPREDDVYRRRMLKNEDRYERSPRTMGDRLDTGVSPLQGAKIVVSNLQASVSPEDILELFGDIGPLKRSKIIESGTAEVVFVNRSDAIKAVEIYHNRQLDGKAMKCHLVGSSDSHSTGSTYRP---PPLPPVSRMESVLRHAQSGGDFPRPVPQ---PEINAIHRALF 428 V DAR K+I R + DARD L+ +A+ QDAR K+ K+R + RT + + + + G +L + +++ T K A P + AI++++G RL + T E RP +R+ A P P L R + G A+Q+ L V ++ +++++R E L + + + P + D+ E PL P R N R + +V+ R D SP + G T V G +IVVSNLQ SV+ +DI ELF DIG L +K++ G AEV++ N DA KAV+ YHNRQLDG+ MKC LV RP P PP+++ ES + P P P+I IH+ LF Sbjct: 45 VQDARTKIIQTKRKTVVDARDVLSKMAKTQDARNKINKMR--------DGRTLLPSTSASVKVIGTNILRKTDRHGKISLVTNK----AKPKS-DINVAIQKQLGLIPNSRLPPRKSASKRNAAVNTQEILRPPVSIRKTILNDMDYNAERLEPIPLYDPALYRWTKPGGRGTASQMINSL-------EVTRQAMREALR-----------EELSNGWPTYASHKTQRLVPSGYVDLDEIEEEEM-PLAPVRSTMNLQGTSRVS-----NVHSRL-----DNSPSSPESHGIFSQTKVVVPAGHRIVVSNLQQSVTQDDIKELFEDIGQLLAAKLVRPGVAEVIYKNLKDAQKAVDTYHNRQLDGQPMKCLLVNK----------RPLNYPTAPPITKSESNFTSRKLPAVSPCPPTNKLVPDIGTIHKVLF 424
BLAST of polymerase delta-interacting protein 3 vs. nr
Match: gi|1285011573|ref|XP_023017823.1| (polymerase delta-interacting protein 3-like isoform X4 [Leptinotarsa decemlineata]) HSP 1 Score: 112.464 bits (280), Expect = 1.736e-23 Identity = 120/410 (29.27%), Postives = 184/410 (44.88%), Query Frame = 0 Query: 23 VPDARFKLIAQNRSQIRDARDRLASLAQGQDARKKLEKIRNLKAGKLEEKRTRNGAVTITQTLRGQTVLTTQRKARELAQKTQKKPVRAGPAAPAAGGAIKRRVGRGGAIRL-----------STQTGETPRPTAPVRR--------GARTTAPAPARVRPLTRTIR-GEMSQAAQLDAELLNTHVDPVVLKRTIKQSMRRSSPP-SSRPRYEPLDMDYDRVERRRE---RSRSPMAMMYYDQPR-ETRYAPLHPPRRRYNDYDDPRAAQPREDDVYRRRMLKNEDRYERSPRTMGDRLDTGVSPLQGAKIVVSNLQASVSPEDILELFGDIGPLKRSKIIESGTAEVVFVNRSDAIKAVEIYHNRQLDGKAMKCHLVGSSDSHSTGSTYRP---PPLPPVSRMESVLRH 404 V DAR K+I R + DARD L+ +A+ QDAR K+ K+R + RT + + + + G +L + +++ T K A P + AI++++G RL + T E RP +R+ A P P L R + G A+Q+ L V ++ +++ + P +S ++ + Y++ R + R++ + Y D E PL P R N R + +V+ R D SP + G T V G +IVVSNLQ SV+ +DI ELF DIG L +K++ G AEV++ N DA KAV+ YHNRQLDG+ MKC LV RP P PP+++ ES +++ Sbjct: 45 VQDARTKIIQTKRKTVVDARDVLSKMAKTQDARNKINKMR--------DGRTLLPSTSASVKVIGTNILRKTDRHGKISLVTNK----AKPKSDI-NVAIQKQLGLIPNSRLPPRKSASKRNAAVNTQEILRPPVSIRKTILNDMDYNAERLEPIPLYDPALYRWTKPGGRGTASQMINSL---EVTRQAMREALREELSNGWPTYASHNSFQKMTGIYNKAPLRSQNLTRTQRLVPSGYVDLDEIEEEEMPLAPVRSTMNLQGTSRVS-----NVHSRL-----DNSPSSPESHGIFSQTKVVVPAGHRIVVSNLQQSVTQDDIKELFEDIGQLLAAKLVRPGVAEVIYKNLKDAQKAVDTYHNRQLDGQPMKCLLVNK----------RPLNYPTAPPITKSESFMQN 418
BLAST of polymerase delta-interacting protein 3 vs. nr
Match: gi|1279730842|ref|XP_022910106.1| (polymerase delta-interacting protein 3-like isoform X1 [Onthophagus taurus]) HSP 1 Score: 110.153 bits (274), Expect = 5.225e-23 Identity = 120/420 (28.57%), Postives = 187/420 (44.52%), Query Frame = 0 Query: 19 VRTGVPDARFKLIAQNRSQIRDARDRLASLAQGQDARKKLEKIRNLKAGKLEEKRTRNGAVTITQTLRGQTVLTTQRKARELAQKTQKKPVRAGPAAPAAGGAIKRRVGRGGAIRLSTQTGETPRPTAPVRRGARTTAPAPARVRPLT-----RTIRGEMSQAAQ---LDAELLNTHVDPVVLKRTIKQSMRRSSPPSSRPR--YEPLDMDYDRVERRRERSRSPMAMMYYDQPRETRYAPLHPPRRRYNDYDDPRAAQPREDDVYRRRMLKNEDRYERSPRTMGDRLDTGVSPLQGAKIVVSNLQASVSPEDILELFGDIGPLKRSKIIESGTAEVVFVNRSDAIKAVEIYHNRQLDGKAMKCHLVGSSDSHSTGSTYRPPPLPPVSRMESVLRHAQSGGDFPRPVPQPEINAIHRALF 428 ++ V DAR KLI R +RDARD LA++A+ QDAR KLE K+ +KR+ G V G +++ + +++ T K P AI++++G +P+ +P R P P+ +P +TI + + Q D L V P ++ P +S PR Y P D+ ++ +R + + D APL P + ++ R L ++S + + T V G +IVVSNLQ V+ +DI ELF DIG L ++++ GTAEV++ + DA KAVE YHNRQLDG+ MKC LV ++ P P ++ + SV R + + D + V P+++ IH+ LF Sbjct: 25 IKPNVADARQKLIQSKRKNVRDARDILANMAKKQDARNKLE--------KMRQKRS--GDVKYI----GNSIMKKTDRNGKISLVTNK------PKLNDLNVAIQQQLG--------LLQSRSPKKISPKR-------PIPSVKQPFVPPVIRKTILNDYTLPVQTYPFDQSDLYRWVHPDII------------PQTSEPRRNYNPSDLRFNS-----KRLAGYVDLDAVDDEEMPLVAPLR--------------TTPIKMSIHSR--LDTLPAPQQSHGVLASGIKTKVVIPVGHRIVVSNLQGGVTEDDIRELFEDIGELLVARLVRPGTAEVIYKDLKDAQKAVETYHNRQLDGQPMKCLLVNKRPINN-------PTAPAIAPVGSVSRKS-TISDSNKLV--PDLSTIHKVLF 366 The following BLAST results are available for this feature:
BLAST of polymerase delta-interacting protein 3 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of polymerase delta-interacting protein 3 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 14
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BLAST of polymerase delta-interacting protein 3 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold676_size113663:57315..59258+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold676_size113663-snap-gene-0.27 ID=maker-scaffold676_size113663-snap-gene-0.27|Name=polymerase delta-interacting protein 3|organism=Tigriopus kingsejongensis|type=gene|length=1944bp|location=Sequence derived from alignment at scaffold676_size113663:57315..59258+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'polymerase delta-interacting protein 3' has the following synonyms
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