GM26080, maker-scaffold706_size108852-snap-gene-0.17 (gene) Tigriopus kingsejongensis

Overview
NameGM26080
Unique Namemaker-scaffold706_size108852-snap-gene-0.17
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of GM26080 vs. L. salmonis genes
Match: EMLSAG00000006583 (supercontig:LSalAtl2s:LSalAtl2s361:311805:317290:1 gene:EMLSAG00000006583 transcript:EMLSAT00000006583 description:"maker-LSalAtl2s361-snap-gene-2.24")

HSP 1 Score: 75.8702 bits (185), Expect = 1.201e-15
Identity = 61/228 (26.75%), Postives = 101/228 (44.30%), Query Frame = 0 
Query:   67 LRSDVINKDLIDNVLSKVEGTTKIVLETLTVGPSTTGKASLLEERYGILVTAKVK------HQPQTYYWIAKVL-----SPEIETSNYARFQGILETECNFYAKFIPELSRLGAP-LPQFYPLVHCNYAKLGREILLLEDMTKYGFKQSVCDPKGLDLAHTINVIEWLARLHGLGYVSINNHRDGSKGWLSQNPWIRKEEQERKAKAQPTDETDAEGIRSRLMNMAAN 282
            LR D+IN+  I +V+ K  G  KI+    +   +  G   +     G L+  ++K      ++ Q  +W+ K +     S  I+  N      +   E  FY +F  +L +   P L +  PL+H    ++ RE+L+ E++    ++  +   KG D  H  +V +WLA LHG  YV    +  G   W + N + +    E   K   T   D E I + LMN + N
Sbjct:    9 LREDIINESFIKDVIKKRYGEKKILCSYKSKVGTEKGDNFM-----GDLIACEIKVKDQERNEEQILHWMLKTMKVGKGSKAIQEMN------LFSREEAFYTQFQNDLDKYIKPNLLRIVPLIHS-VNEVNREVLVFENLNALDYETPINKKKGFDDNHVHSVCKWLAELHGAAYVLFQRYPGGYAEWKNNNFFYKYLGDENFEKFFDTMPRDIENILNNLMNGSDN 224
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BLAST of GM26080 vs. L. salmonis genes
Match: EMLSAG00000009446 (supercontig:LSalAtl2s:LSalAtl2s607:109434:111273:-1 gene:EMLSAG00000009446 transcript:EMLSAT00000009446 description:"maker-LSalAtl2s607-snap-gene-1.21")

HSP 1 Score: 57.3806 bits (137), Expect = 1.961e-9
Identity = 54/233 (23.18%), Postives = 97/233 (41.63%), Query Frame = 0 
Query:   67 LRSDVINKDLIDNVLSKVEGTTKIVLETLTVGPSTTGKASLLEERYGILVTAKVK------HQPQTYYWIAKVLSPEIETSNYARFQGILETECNFYAKFIPELSRLGAP-LPQFYPLVH-CNYAKLGREILLLEDMTKYGFKQSVCDPKGLDLAHTINVIEWLARLHGLGYVSINNHRDGSKGWLSQNPWIRKEEQERKAKAQPTDETDAEGIRSRLMNMAANALKSKVDGT 291
            LR D++NK  I ++L +  G     L       S  G   +     G LV   ++      ++ + + W+ KV+          +F  + E E  FY  ++ +L +   P + +  PL++  N   L  ++L+ E +   G++  V    G+D  H  NV +WLA LHG  +V    +  G   W   N +           A+P      +   + L+N   N L+  ++G+
Sbjct:   45 LREDIVNKSFIHDILKEKYGNDIQFLSYSARVGSDIGDNYI-----GDLVAVDIQVKNVKTNEEKMFNWMFKVMKRGKCEKGMKQF-SLFEREFAFYNNYLDDLDKYVKPKILRTVPLIYSVNNPDL--QVLVFEHLGASGYRDPVDKKIGVDDDHVYNVCKWLAELHGSAFVLFQKYPGGFSEWKKNNFF-----------AEPVQSDQFDEFGATLVNSYYNLLEDLLNGS 258
[Close]
BLAST of GM26080 vs. L. salmonis genes
Match: EMLSAG00000006365 (supercontig:LSalAtl2s:LSalAtl2s348:304398:306431:1 gene:EMLSAG00000006365 transcript:EMLSAT00000006365 description:"maker-LSalAtl2s348-augustus-gene-2.11")

HSP 1 Score: 51.2174 bits (121), Expect = 1.357e-7
Identity = 54/197 (27.41%), Postives = 85/197 (43.15%), Query Frame = 0 
Query:   63 EMAFLRSDVINKDLIDNVLSKVEG-TTKIVLETLTVGPSTTGKASLLEERYGILVTAKVK------HQPQTYYWIAKVLSPEIETSNYARFQGILETECNFYAKFIPELSRLGAP-LPQFYPLVHCNYAKLGREILLLEDMTKYGFKQSVCDPK----GLDLAHTINVIEWLARLHGLGYVSINNHRDGSKGWLSQN 247
            E++ LR D+IN+  I  +L +  G   K +  T +VG S  G     +   G LV   VK      ++ +T YW+ K             F  + E E  FY  F+ +L +   P + +  PL++ +  K   + L+  +     ++    DPK    GLD  H + V +WLA LHG  +V    +  G   W   N
Sbjct:    4 EISNLREDIINESFIKEILKEKYGDNVKFLSYTASVG-SEKG-----DNYVGDLVAIDVKVKCVDNNEEKTMYWMXKATKRGKCEKGVQEFT-LFERELAFYTTFLEDLEKYVKPKILRTVPLIY-SVNKPDLQTLVFNNXGAEDYE----DPKNKRFGLDDDHVLKVCKWLAELHGSAHVLFQKYPGGFTEWKKNN 188
The following BLAST results are available for this feature:
BLAST of GM26080 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 3
Match NameE-valueIdentityDescription
EMLSAG000000065831.201e-1526.75supercontig:LSalAtl2s:LSalAtl2s361:311805:317290:1... [more]
EMLSAG000000094461.961e-923.18supercontig:LSalAtl2s:LSalAtl2s607:109434:111273:-... [more]
EMLSAG000000063651.357e-727.41supercontig:LSalAtl2s:LSalAtl2s348:304398:306431:1... [more]
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BLAST of GM26080 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of GM26080 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold706_size108852supercontigscaffold706_size108852:86567..91081 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteP:metabolic process
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold706_size108852-snap-gene-0.17-mRNA-1maker-scaffold706_size108852-snap-gene-0.17-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold706_size108852:86567..91081+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold706_size108852-snap-gene-0.17 ID=maker-scaffold706_size108852-snap-gene-0.17|Name=GM26080|organism=Tigriopus kingsejongensis|type=gene|length=4515bp|location=Sequence derived from alignment at scaffold706_size108852:86567..91081+ (Tigriopus kingsejongensis)
ATGGAAACCGTCTTTGTTGGCCTGCTGCAGCTTTTGGGCGCACTCATAGA
TGCGGTCAAAGGAGGCCATGGCCTCAGTGTGGCTCAATCCGGTCTCCGGT
CTAATCGAGGTTGGGCTGGCGTCTCGACGTCGATCGGCTTTGTTTGGGTT
GGGATTGAAAGTTGGAGCAGCGGAGAGGCTGAAGGTGGCTGAGTGCGCTC
ACCGCCTACCCGACCCAGGCCACAGAGCTAGCCTGACCGGGTTTTAAGTT
CGTCATGGGGTGAAATTGGTAGTCCAGGGATTTCGGATAATTATCCCGGC
CCTGTAATGATTTTCATACAGCTAGAAGAGACAAGTATTCCCGACAGCTT
CGCGTTTAGCATATTGGCCACTCTTGGGGCCCAATTCTGACAGAGTTTGC
CACTATTTGTGGTGTTCTTGAGCGGTTCCGATGGCAATGTGAAGGGGAAG
GGATGCCTTAGCCTCGCCCATGACCGTTTTCATGCCCATCGCTTGCCCGT
AATGTCAGGTACCGTCGAATCGACGGGGCGGCGAGTGACTGAATGGCCAC
CCTGACTGGAATCCGAGCGTGGGCAGGGTGACTGAATGCTAGGTACTACA
ATGAACTTTGGCCAGTTATTGATCATAAATTAGGGTCACAAGGAGACACG
TATTGTTAAAAGACTAGGCCAGTGATCCCCTCCCTCTCATCTGCCTGTTA
ATAATGTATGTATCATAGAGACAGATTATACCCCTTAGGTATTATGCGGA
TTGAAAATTCACTGGATATGCCCAACGATCCATTTTGATTTGGGCTCTAT
GAAATTTGAATTGGGCACCATTTCTGTCCAAGGCACCAAACTTCATTTAG
TTTCGATCATCCTAACTTGGTCATTTATTTCGCCTGGGAACTATTTCACC
TATTGAGAATTATGCTTTTTCGAAAATAAGTTATTTTACTGCAATTTCGG
CACCCTGTGTTTTGATCGTTTTTCCAACCTAAATGTTGGTCATGCCACTC
TGGGTCATACATATATAAGGTGTATCGGCGCATCACTAAATTTTACCCAA
CAGACGCATTTTTTTACCTGCGTTCTGCTTCGCTAAAGGCAGGGCCAGAA
CACAACTCCAAGGCCGACCATATTAAGCTTAACAACTATTGCTAATTTGA
ATTACGCTGCATCTGTGGATATAGCTTTAATTGCGTGGAAATAACCTAAT
ACCTTCGTTTTTCCCAAGCATTCACGAGCCATCCCCTCTCCATTATTTCA
GTGCCAATTCGACTCAATACCTTCCCCCAGAATGCAGATATTGTGTCGAA
TTAGTAGTTAGTATTTCATTAACCTCAAATCACTCGCACCGAGTGATTTG
AGGTTAATGAAATACTAAATTGTTGCCTTGCCTCCGTGAAACAGAATGGT
TGCTCTATGAAAGCATCATTTTTCTACAAATATGCCAACCTGCTCATGTC
AATTAGCTCCCTCCTGAAGTCCCCTACATTTGCTTTCCGATTCTTTTTTA
TCAGCAGGTATTGGGGTGATCATTTTGATTACGCTTGGTAAATTTTCTGG
TGCACCTGTACATTAAAATGGGATGCTTGTCATATTTTTCCACATGATGT
CACGTTTTCCTCTCAAAGCTTGGGACACCTTGTTTGCATTTGATTGCTCT
TTTACAGGTAAACCATCCGACGTGAGCCGACAATGTGTCGGGAAAGCCAA
ATGTGCTGCAGATCGGAGCACAACTTTGCCTAGTTTCAATATGGACCGAG
CAAGTGTGTACAAATATATTACTCTATAACCTCAAGTGGCTCTCTCGATT
TCAAAGTTCTGCTCCACTATGATCCAATGTTGACTCAGATCGCCAAGGAT
GCTCAACTAAGGTGTTCTTATCTTGTTGCAATTGAGGTGCAAAAGGGAGT
GATGACAAACATGATGAAATTCCTCTCCAAAACTTGTCATAGTGGCTAAA
GGGAGCTAAATGTCAGTGAGTCACGTGTGGAATATCGACTCGATTGGAGC
GATCGACAGTTGTTAGAATTCGTTCTCAGGAGAGATGGCCTTCCTCAGGT
CCGACGTCATCAACAAGGACCTCATTGACAACGTCCTCAGCAAGGTTGAG
GTAACCATCGCTTTACTTTGTATTGAAAGAGAAACCTAGACTAGAGATGG
TCAAGATTCTGACATTCGTCGGCAATGCAACTCGGAGAAATGTACATTTG
CATCGATTGGTGTCATTATTTTCGAACCATGCTAGATTGTTTTGAAATAT
TGAAGCGGGAAATTTGATAGTATTTTTCGAGCAGTATTTTTAAAGAGCTT
CTTCCTTTCTGGGAACTCCGACAGGCAGAAAGAACACCATTTCTAAATTT
GGTTTTTTATTCTACACATTAATTTGTCCATTTGTTACGAAAGGAAAGAA
GGGTTTTCCAATTTACTGGGAAATTAATTCCTGTGGAGCCCTCAATCTGG
GTAATTTGTAAGAACTGGGGTTCGGGAAAAAAATAAGAACGCAACACTTA
AATTATTATTTTTTTACATTTCCCTCATTACTTTATCACTAAATTGAGGT
TGGTCTATGTATATAAATAGACCAAGTTTTCATTTATTTTGTGATTTTGC
ATATTCTATTGACAAACCGCTCCGCAAAAGGGCTTTTTATTTAATTTTTT
GAAATGTTTATCGGGCAATTATTTTAAAGATCCTAGAAACAACAACGAAA
TTTAAAAAATAAATACATCAATTTTCCATCCCTTTTGATCGAGGCCAAGT
GGTCACAAGTGTTTACGCCACCATTTTTTGAGGTGACCGCCAAAGAACCC
CGCTTTTTTGCCAACAAGTATTAAGAACTCTCTGTATTTAATTGATTATT
TTGAGACCAACAAGGAAAGGTTGTCAACGGATCCAAGAACACGAAAATGT
TTAATAGTGATGAAACGCTTTTCCTTTATTTCGACTGTAGTCGATATTTT
GTGTCGAAAACCCCTCAAAGGCGAAATATCCAGAAAATTTAGGAAAATTT
CGCATATTTTACCTTTTTTCAATCGACGCTGAATGGCTGATTTGCATCTT
CAATGGGGAAAGAGTTCGGGCGCTGTGCCCAAAAATGAGTAAATTCACGA
ATACTTGGTTTTTTTGCCGAAATATCTCCAAGACTGAATATCGAAGAAAA
TTCCCGCCGACTCAAATTTCCGTGCAGCACCAAATTTAACACTAGGTTGT
ACACATGGGTGTGTTAAGTCTTGGAATCTATAACTTCATAGGGCACCACG
AAAATTGTCTTGGAGACTCTGACAGTGGGCCCAAGTACCACGGGCAAGGC
CTCACTCTTGGAGGAGAGATATGGCATCCTTGTCACAGCCAAAGTCAAAC
ACCAGCCCCAAACCTACTATTGGATCGCCAAAGTTCTGAGCCCGGAGATC
GAGACATCCAACTATGCCAGATTTCAAGTGAGGCTAATCTAAGACTGTAC
AGGCTTGGTGGGCTCAACACTGCCTACTTTCGTCGGTTTGGCTTTGTTTC
AGGGAATCTTGGAGACCGAGTGCAACTTTTACGCCAAGTTCATCCCCGAG
TTGTCCCGGTTGGGTGCTCCCTTGCCCCAGTTTTACCCCTTGGTCCATTG
CAACTATGCCAAATTGGGACGAGAAATCCTCCTCCTGGAAGACATGACCA
AGTATGGGTTCAAGCAATCTGTTTGCGATCCCAAAGGTAAATGGCGGCTG
ACAAAACTAGTTAATACCAGAGCGAATACCATTGTTCGGTGCTAATCCGT
TGAGACCACTTGGTGTACTTATTATCATGGAACCACGTAAATTTGCTGGA
AGTGTCTACTTCATCATAGGTCTTGATTTGGCTCACACCATCAATGTCAT
CGAATGGCTGGCCAGGCTCCATGGACTTGGATATGTGTCAATTAACAATC
ACAGAGACGGCTCCAAAGGCTGGCTGAGCCAAAACCCATGGATTCGCAAA
GAGGAGCAAGAAAGGAAAGCTAAGGCCCAGCCCAGTAAGTATGCTTGGCA
GGGACAAGGGATGCTCTAGTTAACCCTTACAGGCAAATGCCGAGTGCATA
CCCAAATTCAAACTTATTCATGCAAACTGTCCCATGTTTGAACAGTGACA
GCTGATGAGACTGATGCTGAGGGAATCCGATCCCGACTAATGAACATGGC
TGCCAATGCTCTCAAGTCCAAGGTGGATGGCACCCCAAAAGTGGAGAAAT
GTTTACAACGACAAAACTGGTTGGACGATCTGCGAGAGGTGAGGATAACC
ACGGAACACCCTGTACATCTGGAAGTGTTACTCACGATTGTTTTTTCATT
TTCAATATGAATTTCTGACGAGACGATGGCACCCAATGGAAGTATTATAA
TCTGTTTAATTCGCCGACGAGGAATTACCTCTGTTGCACCCACGTCAATA
CCGACGGGGATGCCAACAGAAACTAAACTACATTGTGGTAAAGCAAATCG
AAAGCAAAATCGTCCGTACATAGTAGTCGGACGTGGGCAAGAAGTACGTG
GAGTGTCAAGGCTGA
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Synonyms
The feature 'GM26080' has the following synonyms
Synonym
Tk07359
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