mitochondrial transcription factor b1, maker-scaffold712_size108441-snap-gene-0.36 (gene) Tigriopus kingsejongensis

Overview
Namemitochondrial transcription factor b1
Unique Namemaker-scaffold712_size108441-snap-gene-0.36
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of mitochondrial transcription factor b1 vs. L. salmonis genes
Match: EMLSAG00000012361 (supercontig:LSalAtl2s:LSalAtl2s903:216203:218634:1 gene:EMLSAG00000012361 transcript:EMLSAT00000012361 description:"augustus_masked-LSalAtl2s903-processed-gene-1.7")

HSP 1 Score: 323.168 bits (827), Expect = 1.242e-109
Identity = 161/318 (50.63%), Postives = 221/318 (69.50%), Query Frame = 0 
Query:    5 RRLPPLPTPRDILRLYGIRAQKKLSQNFILDPRTLDKLARSAGPLLGKTVLEVGPGPGGITRAILGQGARLVHVIEKDPRFLTSLQLLQEAAGNRITIQIGDILRANLARTFEEELRVPWDHPNPPDIRQISNLPFSVTTPFLLGNIRDMEKRQNIYAYGRVPSVITVQKEVAERMVSSPGERERSRLSVMCQNFAQIRLKYFLKGGGFVPKANVDVAVITLLPLRKPYIELPFGFLERVFTTVFHGKQKHIRTTVGNLFPGKNRVEKAEELLNMCRLPFDRTAISLDLNDFEKIAYHFRELCDKDARLAKYVFPEIK 322
            +RLPPLPT +DILR+YGIRAQKKLSQNFILDP+TL +L++  G L  KTV+EVGPGPGGIT AIL QGA+ V VIEKD RFL SL LL+EA+GNR++I+IGD L  N  +    +L+  W     P+IR I NLPF+V TP+++     M  R NI+++GRVPS++T Q EVA R+++ PG++ R RLSVM QN+A+I  KY L G  FVP   V+V V  L+PL  PYI++PF FLERV TT+   KQK +  T   LFP + R + A +LL++  +  D+  + L ++DF +I Y ++++  K   + +Y+  ++K
Sbjct:    3 QRLPPLPTLKDILRIYGIRAQKKLSQNFILDPKTLSRLSKVTGSLYNKTVVEVGPGPGGITXAILEQGAQKVFVIEKDSRFLPSLDLLREASGNRLSIKIGDCLHFNTQKLLNSDLKSNWPD-QVPNIRLIGNLPFNVATPYVVKLFECMSDRSNIFSFGRVPSILTFQHEVAYRLIAPPGDKHRCRLSVMAQNYAKIDYKYTLPGAAFVPTPEVNVGVAVLIPLSVPYIDVPFKFLERVVTTIMMHKQKSVFRTSLRLFPSEVRGKMAMQLLDVSGVSKDKRPLDLTMDDFARITYTYQDMIQKYENVKEYINRDVK 319
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BLAST of mitochondrial transcription factor b1 vs. L. salmonis genes
Match: EMLSAG00000006273 (supercontig:LSalAtl2s:LSalAtl2s341:673186:674124:1 gene:EMLSAG00000006273 transcript:EMLSAT00000006273 description:"augustus_masked-LSalAtl2s341-processed-gene-6.3")

HSP 1 Score: 68.9366 bits (167), Expect = 2.428e-13
Identity = 54/216 (25.00%), Postives = 103/216 (47.69%), Query Frame = 0 
Query:   21 GIRAQKKLSQNFILDPRTLDKLARSAGPLLGKTVLEVGPGPGGITRAILGQGARLVHVIEKDPRFLTSLQ--LLQEAAGNRITIQIGDILRANLARTFEEELRVPWDHPNPPDIRQISNLPFSVTTPFLLGNIRDMEKRQNIYAYGRVPSVITVQKEVAERMVSSPGERERSRLSVMCQNFAQIRLKYFLKGG--GFVPKANVDVAVITLLPLRKP 232
            G+     L Q+ + +P  +D +   +G     TVLE+GPG G +T  +L +  R++ V E DPR +  LQ      +  +++ I +GD ++ +L                P     ++N+P+ +++P +   +           + RV +V+  Q+E A+R+++ PG++   RLS+  Q  + +   + LK G   F P   V+ +V+ + P   P
Sbjct:   26 GLVFNTTLGQHILKNPAVVDSIVEKSGLRSTDTVLEIGPGTGNLTAKLLEKVKRVI-VCEVDPRMVAELQKRFQHSSYKSKLDIIVGDAIKTDL----------------PFFDVCVANVPYQISSPLVFKLLLH-------RPFFRV-AVLMFQREFAQRLIAPPGDKLYCRLSINTQLLSTVH--HLLKVGKNNFRPPPKVESSVVRIEPKNPP 214
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BLAST of mitochondrial transcription factor b1 vs. SwissProt
Match: gi|123893272|sp|Q28HM1.1|TFB1M_XENTR (RecName: Full=Dimethyladenosine transferase 1, mitochondrial; AltName: Full=Mitochondrial 12S rRNA dimethylase 1; AltName: Full=Mitochondrial transcription factor B1; Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 1; Flags: Precursor)

HSP 1 Score: 261.536 bits (667), Expect = 5.577e-84
Identity = 131/315 (41.59%), Postives = 195/315 (61.90%), Query Frame = 0 
Query:    6 RLPPLPTPRDILRLYGIRAQKKLSQNFILDPRTLDKLARSAGPLLGKTVLEVGPGPGGITRAILGQGARLVHVIEKDPRFLTSLQLLQEAAGNRITIQIGDILRANLARTFEEELRVPWDHPNPPDIRQISNLPFSVTTPFLLGNIRDMEKRQNIYAYGRVPSVITVQKEVAERMVSSPGERERSRLSVMCQNFAQIRLKYFLKGGGFVPKANVDVAVITLLPLRKPYIELPFGFLERVFTTVFHGKQKHIRTTVGNLFPGKNRVEKAEELLNMCRLPFDRTAISLDLNDFEKIAYHFRELCDKDARLAKYVFPE 320
            RLPPLPT  +I++L+ +RA+K+LSQNF+LD +  DK+ R AG L    V EVGPGPGGITR+IL  G   + V+EKD RF+  L++L EA+  ++ I  GDIL   + R F + L+ PWD  +PP++  I NLPFSV+TP ++  +  +  R   + YGR    +T QKEVAER+ +S   ++RSRLS+M QN   ++  + + G  FVPK  VDV V+   P  +P IE PF  +E+V  +VF  ++K+    V  LFP ++R++  E++L +  +        L +  F+K+   +RE+CD++  L  Y F E
Sbjct:   11 RLPPLPTIGEIIKLFNLRAEKQLSQNFLLDLKLTDKIVRKAGNLQNAYVCEVGPGPGGITRSILNAGVEELLVVEKDTRFIPGLKMLNEASSGKVQIVHGDILTYRMDRAFPKHLKKPWDD-DPPNVHIIGNLPFSVSTPLIIKWLEQLADRTGPFTYGRTQMTLTFQKEVAERLTASTSSKQRSRLSIMAQNLCNVKNCFTIPGRAFVPKPEVDVGVVHFTPFIQPKIEQPFKVVEKVVRSVFQFRRKYCHHGVSILFPEESRLKCTEQMLRLADVDPTLRPTELTMTHFKKLCNVYREMCDQNPNLFAYNFRE 324
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BLAST of mitochondrial transcription factor b1 vs. SwissProt
Match: gi|122136705|sp|Q2PG46.1|TFB1M_MACFA (RecName: Full=Dimethyladenosine transferase 1, mitochondrial; AltName: Full=Mitochondrial 12S rRNA dimethylase 1; AltName: Full=Mitochondrial transcription factor B1; Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 1; Flags: Precursor)

HSP 1 Score: 259.61 bits (662), Expect = 2.833e-83
Identity = 135/320 (42.19%), Postives = 196/320 (61.25%), Query Frame = 0 
Query:    1 MATCRRLPPLPTPRDILRLYGIRAQKKLSQNFILDPRTLDKLARSAGPLLGKTVLEVGPGPGGITRAILGQGARLVHVIEKDPRFLTSLQLLQEAAGNRITIQIGDILRANLARTFEEELRVPWDHPNPPDIRQISNLPFSVTTPFLLGNIRDMEKRQNIYAYGRVPSVITVQKEVAERMVSSPGERERSRLSVMCQNFAQIRLKYFLKGGGFVPKANVDVAVITLLPLRKPYIELPFGFLERVFTTVFHGKQKHIRTTVGNLFPGKNRVEKAEELLNMCRLPFDRTAISLDLNDFEKIAYHFRELCDKDARLAKYVFPE 320
            ++TCR LPPLPT R+I++L+ ++A K+LSQNF+LD R  DK+ R AG L    V EVGPGPGGITR+IL      + V+EKD RF+  LQ+L EAA  ++ I  GD+L   + + F E L+ PW+  +PP++  I NLPFSV+TP ++  + ++  R   + YGR    +T QKEVAER+ ++ G ++RSRLSVM Q    +R  + + G  FVPK  VDV V+   PL +P IE PF  +E+V   VF  ++K+    +G LFP   R+E    LL +  +        L ++ F+ +   +R +CD+D +L  Y F E
Sbjct:    7 LSTCR-LPPLPTIREIIKLFRLQATKQLSQNFLLDLRLTDKIVRKAGNLANAYVYEVGPGPGGITRSILNADVAELLVVEKDTRFIPGLQMLSEAAPGKLRIVHGDVLTFKVEKAFSESLKRPWED-DPPNVHIIGNLPFSVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQKEVAERLAANTGSKQRSRLSVMAQYLCNVRHIFTIPGRAFVPKPEVDVGVVHFTPLIQPKIEQPFKLVEKVVQNVFQFRRKYCHRGLGMLFPEAQRLENTGRLLELADIDPTLRPRQLSISHFKSLCEVYRRMCDEDPQLFAYNFRE 324
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BLAST of mitochondrial transcription factor b1 vs. SwissProt
Match: gi|81871169|sp|Q811P6.1|TFB1M_RAT (RecName: Full=Dimethyladenosine transferase 1, mitochondrial; AltName: Full=Mitochondrial 12S rRNA dimethylase 1; AltName: Full=Mitochondrial transcription factor B1; Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 1; Flags: Precursor)

HSP 1 Score: 256.529 bits (654), Expect = 5.145e-82
Identity = 134/328 (40.85%), Postives = 198/328 (60.37%), Query Frame = 0 
Query:    6 RLPPLPTPRDILRLYGIRAQKKLSQNFILDPRTLDKLARSAGPLLGKTVLEVGPGPGGITRAILGQGARLVHVIEKDPRFLTSLQLLQEAAGNRITIQIGDILRANLARTFEEELRVPWDHPNPPDIRQISNLPFSVTTPFLLGNIRDMEKRQNIYAYGRVPSVITVQKEVAERMVSSPGERERSRLSVMCQNFAQIRLKYFLKGGGFVPKANVDVAVITLLPLRKPYIELPFGFLERVFTTVFHGKQKHIRTTVGNLFPGKNRVEKAEELLNMCRLPFDRTAISLDLNDFEKIAYHFRELCDKDARLAKYVFPEIKEQLLEYQMEHD 333
            RLPPLPT R+I++L+G+RA K+LSQNF+LD R  DK+ R AG L    V EVGPGPGGITR+IL      + V+EKD RF+  LQ+L +AA  ++ I  GD+L   + + F + +R  W+  +PP++  I NLPFSV+TP ++  + ++  +   + YGR    +T QKEVAER+V++ G ++RSRLS+M Q    +   + + G  FVPK  VDV V+ L+PL +P I+ PF  +E+V   VF  ++K+    +G LFP   R+E    LL +  +        L L  F+ +   +R++CD+D +L  Y F E  +Q      E D
Sbjct:   11 RLPPLPTIREIIKLFGLRAAKQLSQNFLLDLRLTDKIVRKAGSLADVYVYEVGPGPGGITRSILNADIAELLVVEKDTRFIPGLQMLSDAAPGKLRIVHGDVLTYKIEKAFPDNIRRQWED-DPPNVHIIGNLPFSVSTPLIIKWLENISLKNGPFVYGRTKMTLTFQKEVAERLVATTGSKQRSRLSIMAQYLCNVEHLFTIPGKAFVPKPEVDVGVVHLMPLVQPKIKQPFKLVEKVVQNVFQFRRKYCHRGLGMLFPEAQRLESTGRLLQLADIDPTLRPTHLSLMHFKSLCDVYRKMCDEDPQLFAYNFREELKQKKRKGQEKD 337
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BLAST of mitochondrial transcription factor b1 vs. SwissProt
Match: gi|74751555|sp|Q8WVM0.1|TFB1M_HUMAN (RecName: Full=Dimethyladenosine transferase 1, mitochondrial; AltName: Full=Mitochondrial 12S rRNA dimethylase 1; AltName: Full=Mitochondrial transcription factor B1; Short=h-mtTFB; Short=h-mtTFB1; Short=hTFB1M; Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 1; Flags: Precursor)

HSP 1 Score: 254.218 bits (648), Expect = 3.676e-81
Identity = 133/320 (41.56%), Postives = 195/320 (60.94%), Query Frame = 0 
Query:    1 MATCRRLPPLPTPRDILRLYGIRAQKKLSQNFILDPRTLDKLARSAGPLLGKTVLEVGPGPGGITRAILGQGARLVHVIEKDPRFLTSLQLLQEAAGNRITIQIGDILRANLARTFEEELRVPWDHPNPPDIRQISNLPFSVTTPFLLGNIRDMEKRQNIYAYGRVPSVITVQKEVAERMVSSPGERERSRLSVMCQNFAQIRLKYFLKGGGFVPKANVDVAVITLLPLRKPYIELPFGFLERVFTTVFHGKQKHIRTTVGNLFPGKNRVEKAEELLNMCRLPFDRTAISLDLNDFEKIAYHFRELCDKDARLAKYVFPE 320
            ++TCR LPPLPT R+I++L  ++A K+LSQNF+LD R  DK+ R AG L    V EVGPGPGGITR+IL      + V+EKD RF+  LQ+L +AA  ++ I  GD+L   + + F E L+ PW+  +PP++  I NLPFSV+TP ++  + ++  R   + YGR    +T QKEVAER+ ++ G ++RSRLSVM Q    +R  + + G  FVPK  VDV V+   PL +P IE PF  +E+V   VF  ++K+    +  LFP   R+E    LL +  +        L ++ F+ +   +R++CD+D +L  Y F E
Sbjct:    7 LSTCR-LPPLPTIREIIKLLRLQAAKQLSQNFLLDLRLTDKIVRKAGNLTNAYVYEVGPGPGGITRSILNADVAELLVVEKDTRFIPGLQMLSDAAPGKLRIVHGDVLTFKVEKAFSESLKRPWED-DPPNVHIIGNLPFSVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQKEVAERLAANTGSKQRSRLSVMAQYLCNVRHIFTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFKLVEKVVQNVFQFRRKYCHRGLRMLFPEAQRLESTGRLLELADIDPTLRPRQLSISHFKSLCDVYRKMCDEDPQLFAYNFRE 324
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BLAST of mitochondrial transcription factor b1 vs. SwissProt
Match: gi|124053396|sp|Q2TBQ0.2|TFB1M_BOVIN (RecName: Full=Mitochondrial dimethyladenosine transferase 1; AltName: Full=Mitochondrial 12S rRNA dimethylase 1; AltName: Full=Mitochondrial transcription factor B1; Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 1; Flags: Precursor)

HSP 1 Score: 251.136 bits (640), Expect = 4.563e-80
Identity = 132/325 (40.62%), Postives = 197/325 (60.62%), Query Frame = 0 
Query:    1 MATCR-----RLPPLPTPRDILRLYGIRAQKKLSQNFILDPRTLDKLARSAGPLLGKTVLEVGPGPGGITRAILGQGARLVHVIEKDPRFLTSLQLLQEAAGNRITIQIGDILRANLARTFEEELRVPWDHPNPPDIRQISNLPFSVTTPFLLGNIRDMEKRQNIYAYGRVPSVITVQKEVAERMVSSPGERERSRLSVMCQNFAQIRLKYFLKGGGFVPKANVDVAVITLLPLRKPYIELPFGFLERVFTTVFHGKQKHIRTTVGNLFPGKNRVEKAEELLNMCRLPFDRTAISLDLNDFEKIAYHFRELCDKDARLAKYVFPE 320
            MA+ R     RLPPLPT R+I++L+ ++A K+LSQNF+LD R  DK+ R AG L    V EVGPGPGGITR+IL  G   + V+EKD RF+  LQ+L +AA  ++ I  GD+L   + R F E L+  W+  +PP++  I NLPFSV+TP ++  + ++ +R   +AYGR   ++T QKEVAER+ ++ G ++RSRLS+M Q    ++    + G  FVPK  VD  V+   PL +P I+ PF  +E+V    F  ++K+    +G LFP   R+E   +LL +  +        L ++ F+ +   +R++CD+D  L  Y F E
Sbjct:    1 MASSRTLGTFRLPPLPTIREIIKLFRLQAVKQLSQNFLLDLRLTDKIVRKAGNLTNAYVYEVGPGPGGITRSILNAGVAELLVVEKDSRFIPGLQMLSDAAPGKLRIVHGDVLTFKIERAFPESLKRQWED-DPPNVHIIGNLPFSVSTPLIIKWLENVSQRNGPFAYGRTRMMLTFQKEVAERLTATTGSKQRSRLSIMAQYLCDVQHILTIPGQAFVPKPEVDSGVVHFTPLTRPRIKQPFKLVEKVVQNAFQFRRKYCHRGLGMLFPEARRLESTGKLLELADVDPTLRPTQLTVSHFKSLCDVYRKMCDEDPHLFAYNFRE 324
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BLAST of mitochondrial transcription factor b1 vs. SwissProt
Match: gi|75054716|sp|Q5R4V9.1|TFB1M_PONAB (RecName: Full=Dimethyladenosine transferase 1, mitochondrial; AltName: Full=Mitochondrial 12S rRNA dimethylase 1; AltName: Full=Mitochondrial transcription factor B1; Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 1; Flags: Precursor)

HSP 1 Score: 251.136 bits (640), Expect = 5.118e-80
Identity = 131/315 (41.59%), Postives = 190/315 (60.32%), Query Frame = 0 
Query:    6 RLPPLPTPRDILRLYGIRAQKKLSQNFILDPRTLDKLARSAGPLLGKTVLEVGPGPGGITRAILGQGARLVHVIEKDPRFLTSLQLLQEAAGNRITIQIGDILRANLARTFEEELRVPWDHPNPPDIRQISNLPFSVTTPFLLGNIRDMEKRQNIYAYGRVPSVITVQKEVAERMVSSPGERERSRLSVMCQNFAQIRLKYFLKGGGFVPKANVDVAVITLLPLRKPYIELPFGFLERVFTTVFHGKQKHIRTTVGNLFPGKNRVEKAEELLNMCRLPFDRTAISLDLNDFEKIAYHFRELCDKDARLAKYVFPE 320
            RLPPLPT R+I++L  ++A K+LSQNF+LD R  DK+ R AG L    V EVGPGPGGITR+IL      + V+EKD RF+  LQ+L +AA  ++ I  GD+L   + + F E L+ PW+  +PPD+  I NLPFSV+TP ++  + ++  R   + YGR    +T QKEVAER+ ++ G ++RSRLSVM Q    +R  + + G  FVPK  VDV V+   PL +P IE PF  +E+V   VF  ++K+    +  LFP   R+E    LL +  +          ++ F+ +   +R++CD+D +L  Y F E
Sbjct:   11 RLPPLPTIREIIKLLRVQAAKQLSQNFLLDLRLTDKIVRKAGNLTNAYVYEVGPGPGGITRSILNADVAELLVVEKDTRFVPGLQMLSDAAPGKLRIVHGDVLTFKVEKAFSESLKRPWED-DPPDVHIIGNLPFSVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQKEVAERLAANTGSKQRSRLSVMAQYLCNVRHIFTIPGRAFVPKPEVDVGVVHFTPLIQPKIEQPFKLVEKVVQNVFQFRRKYCHRGLRMLFPEAQRLESTGRLLELADVDPTLRPCQPSISHFKSLCDVYRKMCDEDPQLFAYNFRE 324
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BLAST of mitochondrial transcription factor b1 vs. SwissProt
Match: gi|81878249|sp|Q8JZM0.1|TFB1M_MOUSE (RecName: Full=Dimethyladenosine transferase 1, mitochondrial; AltName: Full=Mitochondrial 12S rRNA dimethylase 1; AltName: Full=Mitochondrial transcription factor B1; Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 1; Flags: Precursor)

HSP 1 Score: 249.595 bits (636), Expect = 2.077e-79
Identity = 132/328 (40.24%), Postives = 194/328 (59.15%), Query Frame = 0 
Query:    6 RLPPLPTPRDILRLYGIRAQKKLSQNFILDPRTLDKLARSAGPLLGKTVLEVGPGPGGITRAILGQGARLVHVIEKDPRFLTSLQLLQEAAGNRITIQIGDILRANLARTFEEELRVPWDHPNPPDIRQISNLPFSVTTPFLLGNIRDMEKRQNIYAYGRVPSVITVQKEVAERMVSSPGERERSRLSVMCQNFAQIRLKYFLKGGGFVPKANVDVAVITLLPLRKPYIELPFGFLERVFTTVFHGKQKHIRTTVGNLFPGKNRVEKAEELLNMCRLPFDRTAISLDLNDFEKIAYHFRELCDKDARLAKYVFPEIKEQLLEYQMEHD 333
            RLPPLPT R+I++L+G+RA K+LSQNF+LD R  DK+ R AG L    V EVGPGPGGITR+IL      + V+EKD RF+  LQ+L +AA  ++ I  GD+L   + + F   +R  W+  +PP++  I NLPFSV+TP ++  + ++  +   + YGR    +T QKEVAER+V++ G ++ SRLS+M Q    +   + + G  FVPK  VDV V+ L PL +P I+ PF  +E+V    F  ++K+    +G LFP   R+E    LL +  +        L L  F+ +   +R++CD+D +L  Y F E  +Q      E D
Sbjct:   11 RLPPLPTIREIIKLFGLRAVKQLSQNFLLDLRLTDKIVRKAGSLADVYVYEVGPGPGGITRSILNANVAELLVVEKDTRFIPGLQMLSDAAPGKLRIVHGDVLTYKIEKAFPGNIRRQWED-DPPNVHIIGNLPFSVSTPLIIKWLENISLKDGPFVYGRTKMTLTFQKEVAERLVATTGSKQHSRLSIMAQYLCNVEHLFTIPGKAFVPKPKVDVGVVHLTPLIEPKIKQPFKLVEKVVQNAFQFRRKYCHRGLGMLFPEAQRLESTGRLLQLADIDPTLRPTHLSLMHFKSLCDVYRKMCDEDPQLFTYNFREELKQKKSKGQEKD 337
[Close]
BLAST of mitochondrial transcription factor b1 vs. SwissProt
Match: gi|82188081|sp|Q7T0W5.1|TFB1M_XENLA (RecName: Full=Dimethyladenosine transferase 1, mitochondrial; AltName: Full=Mitochondrial 12S rRNA dimethylase 1; AltName: Full=Mitochondrial transcription factor B1; Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 1; Flags: Precursor)

HSP 1 Score: 248.44 bits (633), Expect = 5.627e-79
Identity = 126/315 (40.00%), Postives = 190/315 (60.32%), Query Frame = 0 
Query:    6 RLPPLPTPRDILRLYGIRAQKKLSQNFILDPRTLDKLARSAGPLLGKTVLEVGPGPGGITRAILGQGARLVHVIEKDPRFLTSLQLLQEAAGNRITIQIGDILRANLARTFEEELRVPWDHPNPPDIRQISNLPFSVTTPFLLGNIRDMEKRQNIYAYGRVPSVITVQKEVAERMVSSPGERERSRLSVMCQNFAQIRLKYFLKGGGFVPKANVDVAVITLLPLRKPYIELPFGFLERVFTTVFHGKQKHIRTTVGNLFPGKNRVEKAEELLNMCRLPFDRTAISLDLNDFEKIAYHFRELCDKDARLAKYVFPE 320
            RLPPLPT  +I++L+ +RA+K+LSQNF+LD +  DK+ R AG L    V EVGPGPGGITR+IL  G   + V+EKD RF+  L++L EA+G ++    GDIL   + R F + L   WD   PP++  I NLPFSV+TP ++  +  +  R   + YGR    +T Q+EVAER+ +S   ++RSRLS+M Q    ++  + + G  F+PK  VDV V+ L P  +P IE PF  +E+V   +F  ++K+    V  LFP + R++  E++L +  +        L +  F+K+   +RE+CD++  L  Y + E
Sbjct:   11 RLPPLPTIGEIVKLFNLRAEKQLSQNFLLDLKLTDKIVRRAGNLQNAYVCEVGPGPGGITRSILNAGVEELLVVEKDTRFIPGLKMLNEASGGKVRTVHGDILTYRMDRAFPKHLIKSWDD-EPPNVHIIGNLPFSVSTPLIIKWLEQVADRTGPFTYGRTQMTLTFQQEVAERLTASTKNKQRSRLSIMSQYLCNVKNCFTIPGRAFIPKPKVDVGVVHLTPFVQPKIEQPFKLVEKVVRCIFQFRRKYCHHGVSILFPEEIRIQLTEQMLRLADVDPTLRPTELTMTHFKKLCNVYREMCDQNPHLFSYNYRE 324
[Close]
BLAST of mitochondrial transcription factor b1 vs. SwissProt
Match: gi|74961647|sp|P91424.2|TFB1M_CAEEL (RecName: Full=Dimethyladenosine transferase 1, mitochondrial; AltName: Full=Mitochondrial 12S rRNA dimethylase 1; AltName: Full=Mitochondrial transcription factor B1; AltName: Full=S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 1; Flags: Precursor)

HSP 1 Score: 231.876 bits (590), Expect = 3.951e-72
Identity = 121/311 (38.91%), Postives = 182/311 (58.52%), Query Frame = 0 
Query:    1 MATCRRLPPLPTPRDILRLYGIRAQKKLSQNFILDPRTLDKLARSAGPLLGKTVLEVGPGPGGITRAILGQGARLVHVIEKDPRFLTSLQLLQEAAGNRITIQIGDILRANLARTFEEELRVP----WDHPNPPDIRQISNLPFSVTTPFLLGNIRDMEKRQNIYAYGRVPSVITVQKEVAERMVSSPGERERSRLSVMCQNFAQIRLKYFLKGGGFVPKANVDVAVITLLPLRKPYIELPFGFLERVFTTVFHGKQKHIRTTVGNLFPGKNRVEKAEELLNMCRLPFDRTAISLDLNDFEKIAYHFRELC 307
            MA+  RLPPLP  RD + +Y +RA+K LSQN+++D     K+A+ A  +    V+E+GPGPGGITRAIL  GA  + V+E D RF+  LQ L EAA +R+ I   D LR  +   ++ E   P    W   N P +  I NLPF++ +P ++  +RDM  R+ ++ YGRVP  +T Q EVA+R+ S      RSR+S+M Q  A+ ++ + + G  FVP+  VDV V+  +P + P +   F  LE+V   VFH +QK++   +  L+P +   E +++LL  CR+    T+I L +  F  +A  + E C
Sbjct:    1 MASASRLPPLPALRDFIHMYRLRAKKILSQNYLMDMNITRKIAKHAKVIEKDWVIEIGPGPGGITRAILEAGASRLDVVEIDNRFIPPLQHLAEAADSRMFIHHQDALRTEIGDIWKNETARPESVDWHDSNLPAMHVIGNLPFNIASPLIIKYLRDMSYRRGVWQYGRVPLTLTFQLEVAKRLCSPIACDTRSRISIMSQYVAEPKMVFQISGSCFVPRPQVDVGVVRFVPRKTPLVNTSFEVLEKVCRQVFHYRQKYVTKGLKTLYPEELEDELSDDLLKKCRIDPTTTSIRLGIEQFADLAEGYNEQC 311
[Close]
BLAST of mitochondrial transcription factor b1 vs. SwissProt
Match: gi|74870888|sp|Q9VTM5.2|TFB1M_DROME (RecName: Full=Dimethyladenosine transferase 1, mitochondrial; AltName: Full=Mitochondrial 12S rRNA dimethylase 1; AltName: Full=Mitochondrial transcription factor B1; AltName: Full=S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 1; AltName: Full=d-mtTFB1; Flags: Precursor)

HSP 1 Score: 203.371 bits (516), Expect = 1.264e-61
Identity = 120/300 (40.00%), Postives = 177/300 (59.00%), Query Frame = 0 
Query:    6 RLPPLPTPRDILRLYGIRAQKKLSQNFILDPRTLDKLARSAGPLLGKT-VLEVGPGPGGITRAILGQGARLVHVIEKDPRFLTSLQLLQEAAGN---RITIQIGDILRANLARTFEEELRVPWDHPNPPDIRQ----ISNLPFSVTTPFLLGNIRDMEKRQNIYAYGRVPSVITVQKEVAERMVSSPGERERSRLSVMCQNFAQIRLKYFLKGGGFVPKANVDVAVITLLPLRKPYIELPFGFLERVFTTVFHGKQKHIRTTVGNLFPGKNRVEKAEELLNMCRLPFDRTAISLDLNDFE 297
            RLPP+PT R++++LY ++A+K+LSQNF++D R  DK+ +SAG +  +  VLEVGPGPGGITR+IL +  + + ++EKDPRF  +LQLL+E A     +  I   DILR N+ +               PD  Q    I NLPF+++T  L+  + D+  R+  +        +T Q+EVAER+ +  G  +R RLSVM Q + +  +K+ + G  FVPK  VDV V+ L+PL++P  +LPF  +ERV   +F  +QK+ R   G L P ++R E AE+L       F R  +   L  FE
Sbjct:   14 RLPPMPTIRELVKLYRLQARKQLSQNFLMDERLTDKIVKSAGRIDPRDLVLEVGPGPGGITRSILRRHPQRLLLVEKDPRFGETLQLLKECASPLNIQFDIHYDDILRFNIEQHI-------------PDTSQRIHLIGNLPFAISTRLLINWLDDLAARRGAFRRIDTCMTLTFQQEVAERICAPVGGEQRCRLSVMSQVWTEPVMKFTIPGKAFVPKPQVDVGVVKLIPLKRPKTQLPFHLVERVVRHIFSMRQKYCRRGYGTLLPPEDREEVAEKL-------FQRAEVQDTLRPFE 293
[Close]
BLAST of mitochondrial transcription factor b1 vs. nr
Match: gi|83583584|gb|ABC24676.1| (mitochondrial transcription factor B1 [Tigriopus californicus])

HSP 1 Score: 484.182 bits (1245), Expect = 9.703e-169
Identity = 221/355 (62.25%), Postives = 292/355 (82.25%), Query Frame = 0 
Query:    2 ATCRRLPPLPTPRDILRLYGIRAQKKLSQNFILDPRTLDKLARSAGPLLGKTVLEVGPGPGGITRAILGQGARLVHVIEKDPRFLTSLQLLQEAAGNRITIQIGDILRANLARTFEEELRVPWDHPNPPDIRQISNLPFSVTTPFLLGNIRDMEKRQNIYAYGRVPSVITVQKEVAERMVSSPGERERSRLSVMCQNFAQIRLKYFLKGGGFVPKANVDVAVITLLPLRKPYIELPFGFLERVFTTVFHGKQKHIRTTVGNLFPGKNRVEKAEELLNMCRLPFDRTAISLDLNDFEKIAYHFRELCDKDARLAKYVFPEIKEQLLEYQMEHDLYHDHNSLFGGEEGNIVQDDAED 356
            +  RRLPPLP+ RD+LRLYGIR+++ LSQNFILDPRTLDK+AR+AGPL G+TV+E+GPGPGGITRA++G GAR V VIEKD RFL+ L+LLQEAA  RI I +GD+L+ NL++  + ELR PWD P  PDIR +SNLPF++T PFL+  IRDM    N+++YGRVP+V+T QKEVAER+++ PG+R RSRLSV+CQNFAQ RLKY LKGG FVP A+VDV V+TLLPLR+PYI+LPF FLE+VFT++FHGKQK +R T+G+LFP +NR+E+A+ LL+ CR+  +RTA+SLD+NDFEKIA+ ++++CDK+ RL KYV PE++E LL+YQ+EH L+ D + L  G   ++ Q + ++
Sbjct:    4 SAARRLPPLPSTRDLLRLYGIRSKRSLSQNFILDPRTLDKIARTAGPLAGQTVVEIGPGPGGITRALIGNGARQVVVIEKDARFLSPLRLLQEAAQGRIIINMGDVLKVNLSKFLDAELRQPWDSPQVPDIRLVSNLPFNITMPFLVRTIRDMAAHDNLFSYGRVPAVLTFQKEVAERIIAQPGDRNRSRLSVLCQNFAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFNFLEKVFTSLFHGKQKTVRKTIGHLFPNQNRLERADILLSTCRIHPNRTAVSLDMNDFEKIAFTYKDMCDKEPRLKKYVLPELRELLLDYQIEHGLFEDQDVLDSGSGFSLTQKEHDE 358
[Close]
BLAST of mitochondrial transcription factor b1 vs. nr
Match: gi|83025301|gb|ABB95743.1| (mitochondrial transcription factor B1, partial [Tigriopus californicus] >gi|83025303|gb|ABB95744.1| mitochondrial transcription factor B1, partial [Tigriopus californicus])

HSP 1 Score: 474.552 bits (1220), Expect = 4.299e-165
Identity = 217/348 (62.36%), Postives = 287/348 (82.47%), Query Frame = 0 
Query:    9 PLPTPRDILRLYGIRAQKKLSQNFILDPRTLDKLARSAGPLLGKTVLEVGPGPGGITRAILGQGARLVHVIEKDPRFLTSLQLLQEAAGNRITIQIGDILRANLARTFEEELRVPWDHPNPPDIRQISNLPFSVTTPFLLGNIRDMEKRQNIYAYGRVPSVITVQKEVAERMVSSPGERERSRLSVMCQNFAQIRLKYFLKGGGFVPKANVDVAVITLLPLRKPYIELPFGFLERVFTTVFHGKQKHIRTTVGNLFPGKNRVEKAEELLNMCRLPFDRTAISLDLNDFEKIAYHFRELCDKDARLAKYVFPEIKEQLLEYQMEHDLYHDHNSLFGGEEGNIVQDDAED 356
            PLP+ RD+LRLYGIR+++ LSQNFILDPRTLDK+AR+AGPL G+TV+E+GPGPGGITRA++G GAR V VIEKD RFL+ L+LLQEAA  RI I +GD+L+ NL++  + ELR PWD P  PDIR +SNLPF++T PFL+  IRDM    N+++YGRVP+V+T QKEVAER+++ PG+R RSRLSV+CQNFAQ RLKY LKGG FVP A+VDV V+TLLPLR+PYI+LPF FLE+VFT++FHGKQK +R T+G+LFP +NR+E+A+ LL+ CR+  +RTA+SLD+NDFEKIA+ ++++CDK+ RL KYV PE++E LL+YQ+EH L+ D + L  G   ++ Q + ++
Sbjct:    1 PLPSTRDLLRLYGIRSKRSLSQNFILDPRTLDKIARTAGPLAGQTVVEIGPGPGGITRALIGNGARQVVVIEKDARFLSPLRLLQEAAQGRIIINMGDVLKVNLSKFLDAELRQPWDSPQVPDIRLVSNLPFNITMPFLVRTIRDMAAHDNLFSYGRVPAVLTFQKEVAERIIAQPGDRNRSRLSVLCQNFAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFNFLEKVFTSLFHGKQKTVRKTIGHLFPNQNRLERADILLSTCRIHPNRTAVSLDMNDFEKIAFTYKDMCDKEPRLKKYVLPELRELLLDYQIEHGLFEDQDVLDSGSGFSLTQKEHDE 348
[Close]
BLAST of mitochondrial transcription factor b1 vs. nr
Match: gi|83025299|gb|ABB95742.1| (mitochondrial transcription factor B1, partial [Tigriopus californicus])

HSP 1 Score: 474.167 bits (1219), Expect = 5.713e-165
Identity = 220/350 (62.86%), Postives = 288/350 (82.29%), Query Frame = 0 
Query:    9 PLPTPRDILRLYGIRAQKKLSQNFILDPRTLDKLARSAGPLLGKTVLEVGPGPGGITRAILGQGARLVHVIEKDPRFLTSLQLLQEAAGNRITIQIGDILRANLARTFEEELRVPWDHPNPPDIRQISNLPFSVTTPFLLGNIRDMEKRQNIYAYGRVPSVITVQKEVAERMVSSPGERERSRLSVMCQNFAQIRLKYFLKGGGFVPKANVDVAVITLLPLRKPYIELPFGFLERVFTTVFHGKQKHIRTTVGNLFPGKNRVEKAEELLNMCRLPFDRTAISLDLNDFEKIAYHFRELCDKDARLAKYVFPEIKEQLLEYQMEHDLYHDHNSLFGGEEGNIVQDDA-EDA 357
            PLP+ RD+LRLYGIR+++ LSQNFILDPRTLDK+AR+AGPL G+TV+E+GPGPGGITRA++G GAR V VIEKD RFL  L+LLQEAA  RI I +GD+L+ NL++  + ELR PWD P  PDIR +SNLPF++T PFL+  IRDM    N+++YGRVP+V+T QKEVAER+++ PG+R RSRLSV+CQNFAQ RLKY LKGG FVP A+VDV V+TLLPLR+PYI+LPF FLE+VFT++FHGKQK +R T+G+LFP +NR+E+A+ LL+ CR+  +RTA+SLD+NDFEKIA+ ++++CDK+ RL KYV PE++E LL+YQ+EH L+ D + L  G   ++ Q++  EDA
Sbjct:    1 PLPSTRDLLRLYGIRSKRSLSQNFILDPRTLDKIARTAGPLAGQTVVEIGPGPGGITRALIGNGARQVLVIEKDARFLNPLRLLQEAAQGRIIINMGDVLKVNLSKFLDAELRQPWDSPQVPDIRLVSNLPFNITMPFLVRTIRDMAAHDNLFSYGRVPAVLTFQKEVAERIIARPGDRNRSRLSVLCQNFAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFNFLEKVFTSLFHGKQKTVRKTIGHLFPNQNRLERADILLSTCRIHPNRTAVSLDMNDFEKIAFTYKDMCDKEPRLKKYVLPELRELLLDYQIEHGLFEDQDVLDSGSGFSLTQNEHDEDA 350
[Close]
BLAST of mitochondrial transcription factor b1 vs. nr
Match: gi|83025297|gb|ABB95741.1| (mitochondrial transcription factor B1, partial [Tigriopus californicus])

HSP 1 Score: 473.781 bits (1218), Expect = 8.850e-165
Identity = 220/350 (62.86%), Postives = 287/350 (82.00%), Query Frame = 0 
Query:    9 PLPTPRDILRLYGIRAQKKLSQNFILDPRTLDKLARSAGPLLGKTVLEVGPGPGGITRAILGQGARLVHVIEKDPRFLTSLQLLQEAAGNRITIQIGDILRANLARTFEEELRVPWDHPNPPDIRQISNLPFSVTTPFLLGNIRDMEKRQNIYAYGRVPSVITVQKEVAERMVSSPGERERSRLSVMCQNFAQIRLKYFLKGGGFVPKANVDVAVITLLPLRKPYIELPFGFLERVFTTVFHGKQKHIRTTVGNLFPGKNRVEKAEELLNMCRLPFDRTAISLDLNDFEKIAYHFRELCDKDARLAKYVFPEIKEQLLEYQMEHDLYHDHNSLFGGEEGNIVQDDA-EDA 357
            PLP+ RD+LRLYGIR+++ LSQNFILDPRTLDK+AR+AGPL G+TV+E+GPGPGGITRA++G GAR V VIEKD RFL  L+LLQEAA  RI I +GD+L+ NL++  + ELR PWD P  PDIR +SNLPF++T PFL+  IRDM    N+++YGRVP+V+T QKEVAER+++ PG+R RSRLSV+CQNFAQ RLKY LKGG FVP A+VDV V+TLLPLR+PYI+LPF FLE+VFT++FHGKQK +R T+G+LFP +NR+E+A  LL+ CR+  +RTA+SLD+NDFEKIA+ ++++CDK+ RL KYV PE++E LL+YQ+EH L+ D + L  G   ++ Q++  EDA
Sbjct:    1 PLPSTRDLLRLYGIRSKRSLSQNFILDPRTLDKIARTAGPLAGQTVVEIGPGPGGITRALIGNGARQVLVIEKDARFLNPLRLLQEAAQGRIIINMGDVLKVNLSKFLDAELRQPWDSPQVPDIRLVSNLPFNITMPFLVRTIRDMAAXDNLFSYGRVPAVLTFQKEVAERIIARPGDRNRSRLSVLCQNFAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFNFLEKVFTSLFHGKQKXVRKTIGHLFPNQNRLERAXILLSTCRIHPNRTAVSLDMNDFEKIAFTYKDMCDKEPRLKKYVLPELRELLLDYQIEHGLFEDQDVLDSGSGFSLTQNEHDEDA 350
[Close]
BLAST of mitochondrial transcription factor b1 vs. nr
Match: gi|83025311|gb|ABB95748.1| (mitochondrial transcription factor B1, partial [Tigriopus californicus])

HSP 1 Score: 473.011 bits (1216), Expect = 1.356e-164
Identity = 219/350 (62.57%), Postives = 288/350 (82.29%), Query Frame = 0 
Query:    9 PLPTPRDILRLYGIRAQKKLSQNFILDPRTLDKLARSAGPLLGKTVLEVGPGPGGITRAILGQGARLVHVIEKDPRFLTSLQLLQEAAGNRITIQIGDILRANLARTFEEELRVPWDHPNPPDIRQISNLPFSVTTPFLLGNIRDMEKRQNIYAYGRVPSVITVQKEVAERMVSSPGERERSRLSVMCQNFAQIRLKYFLKGGGFVPKANVDVAVITLLPLRKPYIELPFGFLERVFTTVFHGKQKHIRTTVGNLFPGKNRVEKAEELLNMCRLPFDRTAISLDLNDFEKIAYHFRELCDKDARLAKYVFPEIKEQLLEYQMEHDLYHDHNSLFGGEEGNIVQDDA-EDA 357
            PLP+ RD+LRLYGIR+++ LSQNFILDPRTLDK+AR+AGPL G+TV+E+GPGPGGITRA++G GAR V VIEKD RFL+ L+LLQEAA  RI I +GD+L+ NL++  + ELR PWD P  PDIR +SNLPF++T PFL+  IRDM    N+++YGRVP+V+T QKEVAER+++ PG+R RSRLSV+CQN+AQ RLKY LKGG FVP A+VDV V+TLLPLR+PYI+LPF FLE+VFT++FHGKQK +R T+G+LFP +NR+E+A+ LL+ CR+  +RTA+SLD+NDFEKIA+ ++++CDK+ RL KYV PE++E LL+YQ+EH L+ D + L  G   ++ Q +  EDA
Sbjct:    1 PLPSTRDLLRLYGIRSKRSLSQNFILDPRTLDKIARTAGPLAGQTVVEIGPGPGGITRALIGNGARQVVVIEKDDRFLSPLRLLQEAAQGRIIINMGDVLKVNLSKFLDAELRQPWDSPQVPDIRLVSNLPFNITMPFLVRTIRDMAAHDNLFSYGRVPAVLTFQKEVAERIIAQPGDRNRSRLSVLCQNYAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFNFLEKVFTSLFHGKQKTVRKTIGHLFPNQNRLERADILLSTCRIHPNRTAVSLDMNDFEKIAFTYKDMCDKEPRLKKYVLPELRELLLDYQIEHGLFEDQDVLDSGSGFSLTQKEHDEDA 350
[Close]
BLAST of mitochondrial transcription factor b1 vs. nr
Match: gi|83025305|gb|ABB95745.1| (mitochondrial transcription factor B1, partial [Tigriopus californicus])

HSP 1 Score: 472.241 bits (1214), Expect = 3.218e-164
Identity = 216/348 (62.07%), Postives = 286/348 (82.18%), Query Frame = 0 
Query:    9 PLPTPRDILRLYGIRAQKKLSQNFILDPRTLDKLARSAGPLLGKTVLEVGPGPGGITRAILGQGARLVHVIEKDPRFLTSLQLLQEAAGNRITIQIGDILRANLARTFEEELRVPWDHPNPPDIRQISNLPFSVTTPFLLGNIRDMEKRQNIYAYGRVPSVITVQKEVAERMVSSPGERERSRLSVMCQNFAQIRLKYFLKGGGFVPKANVDVAVITLLPLRKPYIELPFGFLERVFTTVFHGKQKHIRTTVGNLFPGKNRVEKAEELLNMCRLPFDRTAISLDLNDFEKIAYHFRELCDKDARLAKYVFPEIKEQLLEYQMEHDLYHDHNSLFGGEEGNIVQDDAED 356
            PLP+ RD+LRLYGIR+++ LSQNFILDPRTLDK+AR+AGPL G+TV+E+GPGPGGITRA++G GAR V VIEKD RFL+ L+LLQEAA  RI I +GD+L+ NL++  + ELR PWD P  PDIR +SNLPF++T PF +  IRDM    N+++YGRVP+V+T QKEVAER+++ PG+R RSRLSV+CQNFAQ RLKY LKGG FVP A+VDV V+TLLPLR+PYI+LPF FLE+VFT++FHGKQK +R T+G+LFP +NR+E+A+ LL+ CR+  +RTA+SLD+NDFEKIA+ ++++CDK+ RL KYV PE++E LL+YQ+EH L+ D + L  G   ++ Q + ++
Sbjct:    1 PLPSTRDLLRLYGIRSKRSLSQNFILDPRTLDKIARTAGPLAGQTVVEIGPGPGGITRALIGNGARQVVVIEKDARFLSPLRLLQEAAQGRIIINMGDVLKVNLSKFLDAELRQPWDSPQVPDIRLVSNLPFNITMPFXVRTIRDMAAHDNLFSYGRVPAVLTFQKEVAERIIAQPGDRNRSRLSVLCQNFAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFNFLEKVFTSLFHGKQKTVRKTIGHLFPNQNRLERADILLSTCRIHPNRTAVSLDMNDFEKIAFTYKDMCDKEPRLKKYVLPELRELLLDYQIEHGLFEDQDVLDSGSGFSLTQKEHDE 348
[Close]
BLAST of mitochondrial transcription factor b1 vs. nr
Match: gi|83025307|gb|ABB95746.1| (mitochondrial transcription factor B1, partial [Tigriopus californicus])

HSP 1 Score: 471.855 bits (1213), Expect = 4.184e-164
Identity = 220/350 (62.86%), Postives = 287/350 (82.00%), Query Frame = 0 
Query:    9 PLPTPRDILRLYGIRAQKKLSQNFILDPRTLDKLARSAGPLLGKTVLEVGPGPGGITRAILGQGARLVHVIEKDPRFLTSLQLLQEAAGNRITIQIGDILRANLARTFEEELRVPWDHPNPPDIRQISNLPFSVTTPFLLGNIRDMEKRQNIYAYGRVPSVITVQKEVAERMVSSPGERERSRLSVMCQNFAQIRLKYFLKGGGFVPKANVDVAVITLLPLRKPYIELPFGFLERVFTTVFHGKQKHIRTTVGNLFPGKNRVEKAEELLNMCRLPFDRTAISLDLNDFEKIAYHFRELCDKDARLAKYVFPEIKEQLLEYQMEHDLYHDHNSLFGGEEGNIVQDDA-EDA 357
            PLP+ RD+LRLYGIR+++ LSQNFILDPRTLDK+AR+AGPL G+TV+E+GPGPGGITRA++G GAR V VIEKD RFL  L+LLQEAA  RI I +GD+L+ NL++  + ELR PWD P  PDIR +SNLPF++T PFL+  IRDM    N+++YGRVP+V+T QKEVAER+++ PG+R RSRLSV+CQNFAQ RLKY LKGG FVP A+VDV V+TLLPLR+PYI+LPF FLE+VFT++FHGKQK +R T+G+LFP +NR+E+A+ LL+ CR+  +RTA+SLD+NDFEKIA+ ++++CDK+ RL KYV PE++E LL+YQ+EH L+ D + L  G   ++ Q +  EDA
Sbjct:    1 PLPSTRDLLRLYGIRSKRSLSQNFILDPRTLDKIARTAGPLAGQTVVEIGPGPGGITRALIGNGARQVVVIEKDARFLGPLRLLQEAAPGRIIINMGDVLKVNLSKFLDAELRQPWDSPQVPDIRLVSNLPFNITMPFLVRTIRDMAAHDNLFSYGRVPAVLTFQKEVAERIIAPPGDRNRSRLSVLCQNFAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFNFLEKVFTSLFHGKQKTVRKTIGHLFPNQNRLERADILLSTCRIHPNRTAVSLDMNDFEKIAFTYKDMCDKEPRLKKYVLPELRELLLDYQIEHGLFEDQDVLDSGSGFSLTQKEHDEDA 350
[Close]
BLAST of mitochondrial transcription factor b1 vs. nr
Match: gi|83025313|gb|ABB95749.1| (mitochondrial transcription factor B1, partial [Tigriopus californicus])

HSP 1 Score: 470.315 bits (1209), Expect = 1.914e-163
Identity = 217/350 (62.00%), Postives = 287/350 (82.00%), Query Frame = 0 
Query:    9 PLPTPRDILRLYGIRAQKKLSQNFILDPRTLDKLARSAGPLLGKTVLEVGPGPGGITRAILGQGARLVHVIEKDPRFLTSLQLLQEAAGNRITIQIGDILRANLARTFEEELRVPWDHPNPPDIRQISNLPFSVTTPFLLGNIRDMEKRQNIYAYGRVPSVITVQKEVAERMVSSPGERERSRLSVMCQNFAQIRLKYFLKGGGFVPKANVDVAVITLLPLRKPYIELPFGFLERVFTTVFHGKQKHIRTTVGNLFPGKNRVEKAEELLNMCRLPFDRTAISLDLNDFEKIAYHFRELCDKDARLAKYVFPEIKEQLLEYQMEHDLYHDHNSLFGGEEGNIVQDDA-EDA 357
            PLP+ RD+LRLYGIR+++ LSQNF LDPRTLDK+AR+AGPL G+TV+E+GPGPGGITRA++G GAR V VIEKD RFL+ L+LLQEAA  RI I +GD+L+ NL++  + ELR PWD P  PDIR +SNLPF++T PFL+  IRDM    N+++YGRVP+V+T QKEVAER+++ PG+R RSRLSV+CQN+AQ RLKY LKGG FVP A+VDV V+TLLPLR+PYI+LPF FLE+VFT++FHGKQK +R T+G+LFP +NR+E+A+ LL+ CR+  +RTA+SLD+NDFEKIA+ ++++CDK+ RL K+V PE++E LL+YQ+EH L+ D + L  G   ++ Q +  EDA
Sbjct:    1 PLPSTRDLLRLYGIRSKRSLSQNFXLDPRTLDKIARTAGPLAGQTVVEIGPGPGGITRALIGNGARQVVVIEKDARFLSPLRLLQEAAQGRIIINMGDVLKVNLSKFLDAELRQPWDSPQVPDIRLVSNLPFNITMPFLVRTIRDMAAHDNLFSYGRVPAVLTFQKEVAERIIAQPGDRNRSRLSVLCQNYAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFNFLEKVFTSLFHGKQKTVRKTIGHLFPNQNRLERADILLSTCRIQPNRTAVSLDMNDFEKIAFTYKDMCDKEPRLKKFVLPELRELLLDYQIEHGLFEDQDVLDSGSGFSLTQKEHDEDA 350
[Close]
BLAST of mitochondrial transcription factor b1 vs. nr
Match: gi|83025309|gb|ABB95747.1| (mitochondrial transcription factor B1, partial [Tigriopus californicus])

HSP 1 Score: 469.544 bits (1207), Expect = 3.131e-163
Identity = 216/348 (62.07%), Postives = 285/348 (81.90%), Query Frame = 0 
Query:    9 PLPTPRDILRLYGIRAQKKLSQNFILDPRTLDKLARSAGPLLGKTVLEVGPGPGGITRAILGQGARLVHVIEKDPRFLTSLQLLQEAAGNRITIQIGDILRANLARTFEEELRVPWDHPNPPDIRQISNLPFSVTTPFLLGNIRDMEKRQNIYAYGRVPSVITVQKEVAERMVSSPGERERSRLSVMCQNFAQIRLKYFLKGGGFVPKANVDVAVITLLPLRKPYIELPFGFLERVFTTVFHGKQKHIRTTVGNLFPGKNRVEKAEELLNMCRLPFDRTAISLDLNDFEKIAYHFRELCDKDARLAKYVFPEIKEQLLEYQMEHDLYHDHNSLFGGEEGNIVQDDAED 356
            PLP+ RD+LRLYGIR+++ LSQNFILDPRTLDK+AR+AGPL G+TV+E+GPGPGGITRA++G GAR V VIEKD RFL+ L+LLQEAA  RI I +GD+L+ NL++  + ELR PWD P  PDIR +SNLPF++T PFL+  IRDM    N+++YGRVP+V+T QKEVAER+++ PG+R RSRLSV+CQNFAQ RLKY LKGG  VP A+VDV V+TLLPLR+PYI+LPF FLE+VFT++FHGKQK +R T+G+LFP  NR+E+A+ LL+ CR+  +RTA+SLD+NDFEKIA+ ++++CDK+ RL KYV PE++E LL+YQ+EH L+ D + L  G   ++ Q + ++
Sbjct:    1 PLPSTRDLLRLYGIRSKRSLSQNFILDPRTLDKIARTAGPLAGQTVVEIGPGPGGITRALIGNGARQVVVIEKDDRFLSPLRLLQEAAQGRIIINMGDVLKVNLSKFLDAELRQPWDSPQVPDIRLVSNLPFNITMPFLVRTIRDMAAHDNLFSYGRVPAVLTFQKEVAERIIAQPGDRNRSRLSVLCQNFAQARLKYTLKGGXXVPAASVDVGVMTLLPLRQPYIDLPFNFLEKVFTSLFHGKQKTVRKTIGHLFPNXNRLERADILLSTCRIHPNRTAVSLDMNDFEKIAFTYKDMCDKEPRLKKYVLPELRELLLDYQIEHGLFEDQDVLDSGSGFSLTQKEHDE 348
[Close]
BLAST of mitochondrial transcription factor b1 vs. nr
Match: gi|225714488|gb|ACO13090.1| (Mitochondrial dimethyladenosine transferase 1, mitochondrial precursor [Lepeophtheirus salmonis])

HSP 1 Score: 290.041 bits (741), Expect = 7.531e-93
Identity = 145/298 (48.66%), Postives = 203/298 (68.12%), Query Frame = 0 
Query:   25 QKKLSQNFILDPRTLDKLARSAGPLLGKTVLEVGPGPGGITRAILGQGARLVHVIEKDPRFLTSLQLLQEAAGNRITIQIGDILRANLARTFEEELRVPWDHPNPPDIRQISNLPFSVTTPFLLGNIRDMEKRQNIYAYGRVPSVITVQKEVAERMVSSPGERERSRLSVMCQNFAQIRLKYFLKGGGFVPKANVDVAVITLLPLRKPYIELPFGFLERVFTTVFHGKQKHIRTTVGNLFPGKNRVEKAEELLNMCRLPFDRTAISLDLNDFEKIAYHFRELCDKDARLAKYVFPEIK 322
            +KKLSQNFILDP+TL +L++  G L  KTV+EVGPGPGGITRAIL QGA+ V VIEKD RFL SL LL+EA+GNR++I+IGD L  N  +    +L+  W     P+IR I NLPF+V TP+++     M  R NI+++GRVPS++T Q EVA R+++ PG++ R RLSVM QN+A+I  KY L G  FVP   V+V V  L+PL  PYI++PF FLERV TT+   KQK +  T   LFP + R + A +LL++  +  D+  + L ++DF +I Y ++++  K   + +Y+  ++K
Sbjct:    6 RKKLSQNFILDPKTLSRLSKVTGSLYNKTVVEVGPGPGGITRAILEQGAQKVFVIEKDSRFLPSLDLLREASGNRLSIKIGDCLHFNTQKLLNSDLKSNWPD-QVPNIRLIGNLPFNVATPYVVKLFECMSDRSNIFSFGRVPSILTFQHEVAYRLIAPPGDKHRCRLSVMAQNYAKIDYKYTLPGAAFVPTPEVNVGVAVLIPLSVPYIDVPFKFLERVVTTIMMHKQKSVFRTSLRLFPSEVRGKMAMQLLDVAGVSKDKRPLDLTMDDFARITYTYQDMIQKYENVREYINRDVK 302
The following BLAST results are available for this feature:
BLAST of mitochondrial transcription factor b1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000123611.242e-10950.63supercontig:LSalAtl2s:LSalAtl2s903:216203:218634:1... [more]
EMLSAG000000062732.428e-1325.00supercontig:LSalAtl2s:LSalAtl2s341:673186:674124:1... [more]
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BLAST of mitochondrial transcription factor b1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|123893272|sp|Q28HM1.1|TFB1M_XENTR5.577e-8441.59RecName: Full=Dimethyladenosine transferase 1, mit... [more]
gi|122136705|sp|Q2PG46.1|TFB1M_MACFA2.833e-8342.19RecName: Full=Dimethyladenosine transferase 1, mit... [more]
gi|81871169|sp|Q811P6.1|TFB1M_RAT5.145e-8240.85RecName: Full=Dimethyladenosine transferase 1, mit... [more]
gi|74751555|sp|Q8WVM0.1|TFB1M_HUMAN3.676e-8141.56RecName: Full=Dimethyladenosine transferase 1, mit... [more]
gi|124053396|sp|Q2TBQ0.2|TFB1M_BOVIN4.563e-8040.62RecName: Full=Mitochondrial dimethyladenosine tran... [more]
gi|75054716|sp|Q5R4V9.1|TFB1M_PONAB5.118e-8041.59RecName: Full=Dimethyladenosine transferase 1, mit... [more]
gi|81878249|sp|Q8JZM0.1|TFB1M_MOUSE2.077e-7940.24RecName: Full=Dimethyladenosine transferase 1, mit... [more]
gi|82188081|sp|Q7T0W5.1|TFB1M_XENLA5.627e-7940.00RecName: Full=Dimethyladenosine transferase 1, mit... [more]
gi|74961647|sp|P91424.2|TFB1M_CAEEL3.951e-7238.91RecName: Full=Dimethyladenosine transferase 1, mit... [more]
gi|74870888|sp|Q9VTM5.2|TFB1M_DROME1.264e-6140.00RecName: Full=Dimethyladenosine transferase 1, mit... [more]

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BLAST of mitochondrial transcription factor b1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|83583584|gb|ABC24676.1|9.703e-16962.25mitochondrial transcription factor B1 [Tigriopus c... [more]
gi|83025301|gb|ABB95743.1|4.299e-16562.36mitochondrial transcription factor B1, partial [Ti... [more]
gi|83025299|gb|ABB95742.1|5.713e-16562.86mitochondrial transcription factor B1, partial [Ti... [more]
gi|83025297|gb|ABB95741.1|8.850e-16562.86mitochondrial transcription factor B1, partial [Ti... [more]
gi|83025311|gb|ABB95748.1|1.356e-16462.57mitochondrial transcription factor B1, partial [Ti... [more]
gi|83025305|gb|ABB95745.1|3.218e-16462.07mitochondrial transcription factor B1, partial [Ti... [more]
gi|83025307|gb|ABB95746.1|4.184e-16462.86mitochondrial transcription factor B1, partial [Ti... [more]
gi|83025313|gb|ABB95749.1|1.914e-16362.00mitochondrial transcription factor B1, partial [Ti... [more]
gi|83025309|gb|ABB95747.1|3.131e-16362.07mitochondrial transcription factor B1, partial [Ti... [more]
gi|225714488|gb|ACO13090.1|7.531e-9348.66Mitochondrial dimethyladenosine transferase 1, mit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold712_size108441supercontigscaffold712_size108441:33235..36034 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteP:rRNA methylation
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold712_size108441-snap-gene-0.36-mRNA-1maker-scaffold712_size108441-snap-gene-0.36-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold712_size108441:33235..36034-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold712_size108441-snap-gene-0.36 ID=maker-scaffold712_size108441-snap-gene-0.36|Name=mitochondrial transcription factor b1|organism=Tigriopus kingsejongensis|type=gene|length=2800bp|location=Sequence derived from alignment at scaffold712_size108441:33235..36034- (Tigriopus kingsejongensis)
CACAGTTTCATCGCCGTCAGCTGCCCACCGACCTTTGTCGCTCCGGTTCT
TACGTATATTGTTGCCGACTCCGTCAGCTGATGGAGGTGGCAGCTGTTGA
GGTCCCATTGGCCTGGCTTCGTTCCATGGATGGCTAGGATTGACCGATTG
ATGTTCCCATCCGGAGGGTATTGTGCTCGGAGAAAGTCTGTGATATGTCG
GGTCGCCTGTGGGCGTACATGAACAGCACTCCCTTTCTGAAGTACGGTGT
GCCCTTCATCTGTCTGACTGTGGGTAGTTCCTTCGTTGTGTCCGAGTTCA
CTCAGACCCGATTCCGCTACAACCGATACAAATTGGTCCAGGACGAGATC
GAGAAGTGAGTGTGGGTCTCTCAGCCTGGCCTCTAACTAAGGATGGATCA
ATAATTGGCCTGTTTCCTTTTCCAGAACCGGACGCGTTTTGCCCAACACC
CAATCTTTGGAGGAGGTTTACGAGGAGTATCAAAAGGAAAGCGAAACCGA
GAGCAAAGACGACTATCAAATGATCCGAGGCCCTCGACCCTGGGAGGAAG
GCAACGTGGAAATTCAGAAGCCCGTGTTTAAGGTCAACCCCACCGCCTAG
GCCCACATCATGCAGAGTTGTCACCGCATTTGGGCCTTGAGCCGCCTGGC
CTCGTCGCCTCAATACGCCGCCTATCGAATGGCCTCCAATACGCCCAAGG
TCATGCCCCAAATCGAGGTGGACGAACCCAAAGTGCAGAAAGACCTGGGC
CAAATCCAGATGGACTTTGTCAAGAAGGCCGAGCGTAACAATCAGTCCCG
AGCCAAGGAACACAAGCAATTTCGACGCACCGACTGGTACATCGCCGCAT
TTTGCTTCAGCCTCATCGGTGGCATCTATTCGTACACGATGATGGCCATC
AAGCAAGAGGACTTCCTGGACGATTTCGAAATCCCGGACCCCATGGAAGA
GAAGATGAACAAAAATTAATTCACTGAGGGCGTGATATCGCTCGGAAGAA
CCGGATCCGTGCCACCTGTCCGGAGTATAGATCCGTCATCCCCACCATGG
CTACGTGCCGCCGATTACCGCCCCTGCCCACGCCCAGGGACATTCTCAGA
CTTTACGGCATCCGGGCCCAAAAAAAACTATCACAAAATTTCATTCTCGA
CCCACGCACTCTGGATAAGTTGGCTCGATCGGCTGGACCACTCCTAGGGA
AAACCGTGTTGGAGGTGGGACCGGGTCCCGGGGGCATTACACGTGCCATT
CTGGGCCAAGGCGCCCGCTTGGTCCATGTGATCGAAAAGGATCCCCGCTT
CTTGACGTCGCTCCAATTGTTGCAAGAGGCAGCCGGCAATCGGATCACCA
TCCAGATTGGCGATATCCTGCGGGCTAATCTGGCGAGTAAGAGATTTTCT
AAGATTATGAACCATTCGATGGACCCTTTTTGCTGTACTTTTGAGTCACG
TTTAATCAATTTGGCGACGATAGCAAGCGTTCCTCAAGCGGTATCCAGCC
GTGTACATGCTTAGACAAGTAATAGACACTGTCGTAAGGGAAGCCATCAT
AGCTGGATAGTGGCTGCCTACGCTGGCGCTAAGTGGAATCCTGAGCTTTC
CAAGTTCACGGCCACTAGGGGTGTTTACTCACAGCAATTTTTGCTTCCTT
TGCGGGATTAAGTTAGAGTAAAATGTGGCAATTCTTCGAGGGTGAGCTAA
TAATTCATGATAAATTTGCAAAACCTGGCCCAACCGCATGTCTCAATTGA
GATTTCCGAGCTGGACAGGAATGTCCGGGGCCTTGCAAACAAACCAGACT
TTGTCGTGATAACTTGGTAAACATCATTACGACCACTTACTCGATGCACT
CTGCCAGAGTTATCCTATTCAGGTCCTTACCATATAGGGCCTCGGTGGGG
GAGGGGGGCATCTACAGTACATAGTGCCTCTAGGCCCATTTTTTGAGCGG
TCGCTCACCGATTCCTGTTAAGTGTTAACCGTTATTCTTATCTCTTAGGG
ACATTTGAAGAGGAGCTCCGCGTACCATGGGATCATCCCAATCCTCCGGA
CATTCGCCAAATATCCAATTTGCCCTTCAGTGTGACCACGCCCTTCTTGC
TGGGCAACATTCGCGACATGGAAAAACGTCAAAACATTTATGCCTATGGC
CGTGTTCCCTCGGTCATCACTGTCCAGAAGGAAGTTGCCGAGAGGATGGT
TTCCTCACCAGGGGAGAGGGAGCGCAGTCGACTGTCGGTCATGTGCCAGA
ACTTTGCGCAGATTCGCCTCAAGTATTTCCTGAAAGGCGGTGGATTTGTG
CCCAAGGCCAATGTGGACGTCGCTGTGATCACGCTCTTGCCCTTGAGGAA
GCCGTATATCGAGCTCCCATTTGGCTTCCTGGAGCGGGTGTTCACTACGG
TTTTCCACGGCAAGCAAAAGCACATCCGAACGACCGTCGGAAATCTGTTC
CCTGGTAAAAACCGAGTGGAAAAGGCCGAAGAGTTACTGAACATGTGCCG
ACTTCCATTTGACCGGACGGCCATCTCCTTGGACTTGAACGACTTTGAGA
AGATTGCCTATCATTTCCGAGAACTTTGCGACAAGGATGCTCGGTTGGCC
AAGTATGTTTTCCCGGAGATCAAAGAGCAACTCCTCGAATACCAGATGGA
GCACGATCTCTATCACGACCATAACTCTCTATTCGGTGGCGAAGAAGGCA
ACATAGTGCAAGACGACGCAGAAGATGCTCGAACAATTTGATCATATCGT
TTCGACATTTTCTTTCGTTGTCAATACTACGGATTCATTCGTTCTCTTTA
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Synonyms
The feature 'mitochondrial transcription factor b1' has the following synonyms
Synonym
Tk06088
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