GL17472, maker-scaffold735_size104922-snap-gene-0.29 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of GL17472 vs. L. salmonis genes
Match: EMLSAG00000000963 (supercontig:LSalAtl2s:LSalAtl2s1169:21080:22437:-1 gene:EMLSAG00000000963 transcript:EMLSAT00000000963 description:"maker-LSalAtl2s1169-snap-gene-0.17") HSP 1 Score: 99.7525 bits (247), Expect = 5.766e-26 Identity = 47/65 (72.31%), Postives = 55/65 (84.62%), Query Frame = 0 Query: 84 QSPVYNYQYGVNDPEYDGPVFSHNENREHYNTAGEYRVNLPDGRVQIVTYSAGPDGYNADVSYEG 148 ++PVYNY YGVNDP Y G +FSHNENR++ NTAGEYRVNLPDGRVQIV+Y+ +GY ADV YEG Sbjct: 34 KAPVYNYNYGVNDPSY-GSIFSHNENRDNLNTAGEYRVNLPDGRVQIVSYTVDGNGYLADVRYEG 97
BLAST of GL17472 vs. L. salmonis genes
Match: EMLSAG00000011541 (supercontig:LSalAtl2s:LSalAtl2s799:109993:110882:1 gene:EMLSAG00000011541 transcript:EMLSAT00000011541 description:"snap-LSalAtl2s799-processed-gene-1.13") HSP 1 Score: 94.3597 bits (233), Expect = 1.656e-25 Identity = 46/63 (73.02%), Postives = 53/63 (84.13%), Query Frame = 0 Query: 82 PTQSPVYNYQYGVNDPEYDGPVFSHNENREHYNTAGEYRVNLPDGRVQIVTYSAGPDGYNADV 144 P +PVYNY+YGVND EY GP+FS ENR++YNT GEYRVNLPDGRVQIV+YSA +GY ADV Sbjct: 31 PDTAPVYNYRYGVNDQEY-GPIFSQEENRDNYNTDGEYRVNLPDGRVQIVSYSADSNGYLADV 92
BLAST of GL17472 vs. L. salmonis genes
Match: EMLSAG00000012059 (supercontig:LSalAtl2s:LSalAtl2s85:1250196:1251194:1 gene:EMLSAG00000012059 transcript:EMLSAT00000012059 description:"snap-LSalAtl2s85-processed-gene-11.56") HSP 1 Score: 76.2554 bits (186), Expect = 1.533e-18 Identity = 55/128 (42.97%), Postives = 70/128 (54.69%), Query Frame = 0 Query: 27 ISKFLVVASVAVVAFGDHPTGPHHGAHHPGPHHPA-----HHPEPRYPAHRPKYDDHKEEPTQSPVYNYQYGVNDPEYDGPVFSHNENREHYNTAGEYRVNLPDGRVQIVTYSAGP-DGYNADVSYEG 148 + K LV + + +GDH + PH P P+HP H P P Y H PKY EEP Q Y +QYGV D +Y G FS EN + T G Y+V LPDGR+Q V+Y+ +G+ ADV YEG Sbjct: 1 MFKLLVASVLLASVYGDH-SAPHPS---PAPYHPPQPAPYHAPAPSY--HSPKY----EEPAQP--YAFQYGVAD-DYSGSNFSAEENADGKITTGSYKVALPDGRIQTVSYTVDAYNGFVADVQYEG 115
BLAST of GL17472 vs. L. salmonis genes
Match: EMLSAG00000004844 (supercontig:LSalAtl2s:LSalAtl2s2560:13440:35521:-1 gene:EMLSAG00000004844 transcript:EMLSAT00000004844 description:"augustus-LSalAtl2s2560-processed-gene-0.2") HSP 1 Score: 76.6406 bits (187), Expect = 4.298e-18 Identity = 49/99 (49.49%), Postives = 56/99 (56.57%), Query Frame = 0 Query: 52 AHHPGPHHPAHHPEPRYPAHRPKYDDHKEEPTQSPVYNYQYGVNDPEYDGPVFSHNENREHYNTAGEYRVNLPDGRVQIVTYSAGP--DGYNADVSYEG 148 H P P+HPA P H+ Y H E VY Y Y V D +Y G F+ NENR+ Y+TAGEYRV LPDGR QIV Y+ GY ADV YEG Sbjct: 126 VHQPTPYHPA-------PTHKSPY--HAESYDTPAVYQYGYAVAD-DYAGTNFAQNENRDGYSTAGEYRVGLPDGRTQIVNYNVADAYSGYVADVKYEG 214
BLAST of GL17472 vs. L. salmonis genes
Match: EMLSAG00000008937 (supercontig:LSalAtl2s:LSalAtl2s556:194619:195346:1 gene:EMLSAG00000008937 transcript:EMLSAT00000008937 description:"maker-LSalAtl2s556-augustus-gene-2.12") HSP 1 Score: 70.4774 bits (171), Expect = 3.035e-16 Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 0 Query: 86 PVYNYQYGVNDPEYDGPVFSHNENREHYNTAGEYRVNLPDGRVQIVTYS-AGPDGYNADVSYEG 148 P YN+++ VNDP Y G F HNE RE+ T+G Y V LPDGR+Q VTYS +G GY A+V+YEG Sbjct: 39 PKYNFRWNVNDP-YSGNNFQHNEQRENDVTSGSYSVQLPDGRLQKVTYSVSGEGGYQAEVTYEG 101
BLAST of GL17472 vs. L. salmonis genes
Match: EMLSAG00000006883 (supercontig:LSalAtl2s:LSalAtl2s389:598697:599345:-1 gene:EMLSAG00000006883 transcript:EMLSAT00000006883 description:"maker-LSalAtl2s389-augustus-gene-5.28") HSP 1 Score: 68.9366 bits (167), Expect = 4.912e-16 Identity = 47/125 (37.60%), Postives = 60/125 (48.00%), Query Frame = 0 Query: 26 MISKFLVVASVAVVAFGDHPTGPHHGAHHPGPHHPAHHPEPRYPAHRPKYDDHKEEPTQSPVYNYQYGVNDPEYDGPVFSHNENREHY-NTAGEYRVNLPDGRVQIVTYSA-GPDGYNADVSYEG 148 ++ K L+V +V VA D P P + P P+P + YQYGV D +Y G F NE ++ Y N G YRVNLPDGRVQIV Y+ +G+ ADV YEG Sbjct: 10 IMYKLLIVFAVLSVAIADKPYAPTY-------KEPELPPQP---------------------FAYQYGVKD-DYTGTNFDKNEEQDAYGNLKGSYRVNLPDGRVQIVKYTVDAVEGFIADVQYEG 105
BLAST of GL17472 vs. L. salmonis genes
Match: EMLSAG00000001415 (supercontig:LSalAtl2s:LSalAtl2s1241:84693:85124:1 gene:EMLSAG00000001415 transcript:EMLSAT00000001415 description:"augustus-LSalAtl2s1241-processed-gene-0.12") HSP 1 Score: 68.5514 bits (166), Expect = 8.960e-16 Identity = 46/100 (46.00%), Postives = 61/100 (61.00%), Query Frame = 0 Query: 53 HHPGPHHPA--HHPEPRYPAHRPKYDDHKEEPTQSPVYNYQYGVNDPEYDGPVFSHNENREHYNTAGEYRVNLPDGRVQIVTYSAGP--DGYNADVSYEG 148 + P P+HPA + P P +PA P Y KE+P +Y YQY V+D EY G F +E R+ Y+T G+Y V LPDGR+Q V+Y+ GY ADV+Y G Sbjct: 18 YRPAPYHPAPAYKPAPYHPA--PSY---KEDPA---IYQYQYAVSD-EYAGLNFGADEARDGYSTNGKYSVALPDGRIQTVSYNVADAYSGYVADVTYSG 108
BLAST of GL17472 vs. L. salmonis genes
Match: EMLSAG00000008499 (supercontig:LSalAtl2s:LSalAtl2s524:110868:111424:-1 gene:EMLSAG00000008499 transcript:EMLSAT00000008499 description:"maker-LSalAtl2s524-augustus-gene-1.42") HSP 1 Score: 66.2402 bits (160), Expect = 6.763e-15 Identity = 48/124 (38.71%), Postives = 62/124 (50.00%), Query Frame = 0 Query: 27 ISKFLVVASVAVVAFGDHPTGPHHGAHHPGPHHPAHHPEPRYPAHRPKYDDHKEEPTQSPVYNYQYGVNDPEYDGPVFSHNENREHY-NTAGEYRVNLPDGRVQIVTYSA-GPDGYNADVSYEG 148 + K +V++ + AF D P P + P + P Y E P Q + YQYGV D +Y G F+ NE ++ Y N G Y VNLPDGRVQ VTY A +G+ ADV YEG Sbjct: 1 MFKLIVLSVLIAAAFADQPYAPPPPVYK---QAPVYQPAKGY--------KDPELPPQP--FAYQYGVKD-DYTGAAFNKNEEQDSYGNLQGSYSVNLPDGRVQTVTYHADAENGFVADVKYEG 110
BLAST of GL17472 vs. L. salmonis genes
Match: EMLSAG00000009004 (supercontig:LSalAtl2s:LSalAtl2s5650:4067:4550:1 gene:EMLSAG00000009004 transcript:EMLSAT00000009004 description:"snap-LSalAtl2s5650-processed-gene-0.3") HSP 1 Score: 64.6994 bits (156), Expect = 1.667e-14 Identity = 45/130 (34.62%), Postives = 64/130 (49.23%), Query Frame = 0 Query: 27 ISKFLVVASVAVVAFGDHPTGPHHGAHHPGPHHPAH------HPEPRYPAHRPKYDDHKEEPTQSPVYNYQYGVNDPEYDGPVFSHNENREHYNTAGEYRVNLPDGRVQIVTYSAGP--DGYNADVSYEG 148 + F+ ++++ +AF DHP + HP P Y KE+PT VY Y+Y V+D EY G F +E R+ Y+T G+ V LPDGR+Q V+Y+ GY ADV+Y G Sbjct: 1 MKSFIALSALLAIAFADHPAPAPYHPAPAPYXPAPAYKPAPYHPAPSY----------KEDPT---VYQYRYAVSD-EYXGLNFEADEARDGYSTQGKXSVALPDGRIQTVSYNVADAYSGYVADVTYSG 116
BLAST of GL17472 vs. L. salmonis genes
Match: EMLSAG00000001414 (supercontig:LSalAtl2s:LSalAtl2s1241:78790:79435:1 gene:EMLSAG00000001414 transcript:EMLSAT00000001414 description:"augustus-LSalAtl2s1241-processed-gene-0.11") HSP 1 Score: 64.3142 bits (155), Expect = 3.709e-14 Identity = 43/98 (43.88%), Postives = 55/98 (56.12%), Query Frame = 0 Query: 53 HHPGPHHPAHHPEPRYPAHRPKYDDHKEEPTQSPVYNYQYGVNDPEYDGPVFSHNENREHYNTAGEYRVNLPDGRVQIVTYSAGP--DGYNADVSYEG 148 + P P+HPA P Y KE+P VY YQY V+D EY G F +E R+ Y+T G+Y V LPDGR+Q V+Y+ GY ADV+Y G Sbjct: 40 YKPAPYHPA-----------PSY---KEDPA---VYQYQYAVSD-EYAGLNFGADEARDGYSTQGKYSVALPDGRIQTVSYNVADAYSGYVADVTYSG 119
BLAST of GL17472 vs. nr
Match: gi|1325308974|ref|XP_023336108.1| (extensin-2-like [Eurytemora affinis]) HSP 1 Score: 105.145 bits (261), Expect = 3.999e-24 Identity = 62/123 (50.41%), Postives = 73/123 (59.35%), Query Frame = 0 Query: 26 MISKFLVVASVAVVAFGDHPTGPHHGAHHPGPHHPAHHPEPRYPAHRPKYDDHKEEPTQSPVYNYQYGVNDPEYDGPVFSHNENREHYNTAGEYRVNLPDGRVQIVTYSAGPDGYNADVSYEG 148 M SK L+ A V + + P P++PA + +P P +P YNYQYGVNDP Y GPVFS E R YNTAGEYRVNLPDGRVQIV+Y+AGP+GY ADV YEG Sbjct: 1 MASKVLIAALFGVASCSN-----------PAPYNPAPYADPY--------------PAIAPSYNYQYGVNDPHY-GPVFSQQEERNDYNTAGEYRVNLPDGRVQIVSYTAGPEGYVADVRYEG 97
BLAST of GL17472 vs. nr
Match: gi|225714206|gb|ACO12949.1| (Cuticle protein 7 [Lepeophtheirus salmonis]) HSP 1 Score: 76.2554 bits (186), Expect = 6.557e-15 Identity = 50/120 (41.67%), Postives = 65/120 (54.17%), Query Frame = 0 Query: 30 FLVVASVAVVAFGDHPTGPHHGAHHPGPHHPAHHPEPRYPAHRPKYDDHKEEPTQSPVYNYQYGVNDPEYDGPVFSHNENREHYNTAGEYRVNLPDGRVQIVTYSAGP-DGYNADVSYEG 148 F+V + FGDHP A HP P+H A PA++P D +P Y +QYGV+D +Y G F+ EN + AG Y+V LPDGR+Q VTY+A G+ ADV YEG Sbjct: 4 FIVACTFLASVFGDHP------APHPAPYHQA-------PAYKPAPYDESPKP-----YAFQYGVSD-DYSGTKFTAQENSDAKTVAGSYQVALPDGRIQTVTYTADDYAGFVADVKYEG 104
BLAST of GL17472 vs. nr
Match: gi|225713136|gb|ACO12414.1| (Cuticle protein 7 [Lepeophtheirus salmonis]) HSP 1 Score: 72.4034 bits (176), Expect = 2.470e-13 Identity = 47/123 (38.21%), Postives = 68/123 (55.28%), Query Frame = 0 Query: 27 ISKFLVVASVAVVAFGDHPTGPHHGAHHPGPHHPAHHPEPRYPAHRPKYDDHKEEPTQSPVYNYQYGVNDPEYDGPVFSHNENREHYNTAGEYRVNLPDGRVQIVTYSA-GPDGYNADVSYEG 148 + +F++ + + GDH H HHP P H P P Y +P D +P Y ++YGV+D +Y G F+ EN + T+G Y+V LPDGR+Q VTY+ G +G+ ADV+YEG Sbjct: 1 MFRFMIASILLASVLGDH-----HAPHHPA-LAPYHAPSPSY---KPTRYDESPQP-----YAFKYGVSD-DYSGAQFTAEENADGKITSGSYQVALPDGRIQTVTYTVDGYNGFVADVTYEG 108
BLAST of GL17472 vs. nr
Match: gi|290462725|gb|ADD24410.1| (Cuticle protein 18.6, isoform B [Lepeophtheirus salmonis]) HSP 1 Score: 72.0182 bits (175), Expect = 4.216e-13 Identity = 53/128 (41.41%), Postives = 70/128 (54.69%), Query Frame = 0 Query: 27 ISKFLVVASVAVVAFGDHPTGPHHGAHHPGPHHPA-----HHPEPRYPAHRPKYDDHKEEPTQSPVYNYQYGVNDPEYDGPVFSHNENREHYNTAGEYRVNLPDGRVQIVTYSAGP-DGYNADVSYEG 148 + K LV + + +GDH + PH P P+HP H P Y H PKY EEP + Y +QYGV D +Y G FS EN + T+G Y+V LPDGR+Q V+Y+ +G+ ADV YEG Sbjct: 1 MYKLLVASVLLASVYGDH-SAPHPS---PAPYHPPQPAPYHTPASSY--HSPKY----EEPAKP--YAFQYGVAD-DYSGSNFSAEENADGKITSGSYKVALPDGRIQTVSYTVDAYNGFVADVQYEG 115
BLAST of GL17472 vs. nr
Match: gi|1325260207|ref|XP_023329122.1| (cuticle protein 7-like [Eurytemora affinis]) HSP 1 Score: 70.0922 bits (170), Expect = 2.328e-12 Identity = 52/122 (42.62%), Postives = 67/122 (54.92%), Query Frame = 0 Query: 29 KFLVVASVAVVAFGDHPTGPHHGAHHPGPHHPAHHPEPRYPAHRPKYDDHKEEPTQSPVYNYQYGVNDPEYDGPVFSHNENREHYNTAGEYRVNLPDGRVQIVTYSA--GPDGYNADVSYEG 148 K L+V ++A VA GD+ P +G PA+ P P Y P Y D ++PVY + YGV D +Y G F+H ENR+ Y T+G Y V LPDGR+Q V Y GY ADV+Y G Sbjct: 2 KVLIVLALATVAAGDN--APRYGYAP----APAYAPAPSYGHAAPAYAD------ETPVYAFNYGVAD-DYSGATFNHGENRDGYATSGSYSVALPDGRIQTVNYKVDDAYSGYVADVTYSG 110
BLAST of GL17472 vs. nr
Match: gi|1061488138|gb|ODN05194.1| (Pro-resilin [Orchesella cincta]) HSP 1 Score: 70.8626 bits (172), Expect = 2.676e-12 Identity = 37/71 (52.11%), Postives = 47/71 (66.20%), Query Frame = 0 Query: 78 HKEEPTQSPV-YNYQYGVNDPEYDGPVFSHNENREHYNTAGEYRVNLPDGRVQIVTYSAGPDGYNADVSYE 147 H+ + SP Y ++YGV+D GP F H E R T G+YRV LPDGR+QIVTY+A +GY ADV+YE Sbjct: 39 HQNRDSSSPANYKFEYGVDDGA-AGPQFGHEEERNGQKTRGQYRVLLPDGRMQIVTYTADENGYKADVTYE 108
BLAST of GL17472 vs. nr
Match: gi|1067077041|ref|XP_018022125.1| (PREDICTED: cuticle protein 19-like [Hyalella azteca]) HSP 1 Score: 70.8626 bits (172), Expect = 2.767e-12 Identity = 54/132 (40.91%), Postives = 70/132 (53.03%), Query Frame = 0 Query: 26 MISK----FLVVASVAVVAFGDHPT----GPHHGAHHPGPHHPAHHPEPRYPAHRPKYDDHKEEPTQSPVYNYQYGVNDPEYDGPVFSHNENREHYNTAGEYRVNLPDGRVQIVTYSA-GPDGYNADVSYEG 148 M+SK FLVVA+VA GD PT P + A P P P P A RP Y D E+P Y++++ V + D F E+R+ +T G Y V+LPDGR Q VTYS G G+ A+V+YEG Sbjct: 1 MLSKVCVLFLVVATVA----GDRPTYRPPRPTYNAPRPAPTPTYSAPRP---APRPSYQDSFEDPK----YDFEWQVAE---DANNFQQQESRDGDDTRGSYVVDLPDGRRQTVTYSVDGDSGFIAEVNYEG 118
BLAST of GL17472 vs. nr
Match: gi|321472812|gb|EFX83781.1| (hypothetical protein DAPPUDRAFT_315550 [Daphnia pulex]) HSP 1 Score: 69.3218 bits (168), Expect = 3.062e-12 Identity = 45/105 (42.86%), Postives = 58/105 (55.24%), Query Frame = 0 Query: 49 HHGAHHPGPHHPAHHPEPRYPAHR---PKYDDHKEEPTQSPV-YNYQYGVNDPE-YDGPVFSHNENREHYNTAGEYRVNLPDGRVQIVTYSAGPDGYNADVSYEG 148 + + P + A + P+Y A + PKY+ EE T +P Y++ Y V D E Y+ F HNE ++ G YRV LPDGR QIVTY A GY ADV YEG Sbjct: 22 YEAPKYEAPKYEAQYEAPKYEAPKYEAPKYEAKYEEVTYAPQPYSFGYDVQDKESYND--FEHNEKSDYNVVTGSYRVALPDGRTQIVTYKADAYGYTADVKYEG 124
BLAST of GL17472 vs. nr
Match: gi|321472807|gb|EFX83776.1| (hypothetical protein DAPPUDRAFT_301652 [Daphnia pulex]) HSP 1 Score: 70.0922 bits (170), Expect = 3.601e-12 Identity = 41/80 (51.25%), Postives = 51/80 (63.75%), Query Frame = 0 Query: 71 HRPKYDDHKEEPTQSPV-YNYQYGVNDPE-YDGPVFSHNENREHYNTAGEYRVNLPDGRVQIVTYSAGPDGYNADVSYEG 148 + PKY+ EE T +P Y+++Y V D E Y+ F H+E ++ G YRV LPDGR QIVTY A DGYNADV YEG Sbjct: 23 YAPKYEAKYEEVTYAPQPYSFEYDVQDKESYND--FLHSEKSDYNVVTGSYRVALPDGRTQIVTYKADKDGYNADVKYEG 100
BLAST of GL17472 vs. nr
Match: gi|1325276927|ref|XP_023323118.1| (cuticle protein 7-like [Eurytemora affinis]) HSP 1 Score: 70.4774 bits (171), Expect = 8.032e-12 Identity = 35/65 (53.85%), Postives = 43/65 (66.15%), Query Frame = 0 Query: 84 QSPVYNYQYGVNDPEYDGPVFSHNENREHYNTAGEYRVNLPDGRVQIVTYSAGPDGYNADVSYEG 148 ++P Y + Y V D +Y F E R+ Y+TAG YRV LPDGR QIVTY+A DG+ ADV YEG Sbjct: 47 EAPKYAFTYAVKD-DYTYTNFDAAEQRDGYDTAGSYRVALPDGRTQIVTYTANKDGFVADVKYEG 110 The following BLAST results are available for this feature:
BLAST of GL17472 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of GL17472 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of GL17472 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold735_size104922:69830..70353- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold735_size104922-snap-gene-0.29 ID=maker-scaffold735_size104922-snap-gene-0.29|Name=GL17472|organism=Tigriopus kingsejongensis|type=gene|length=524bp|location=Sequence derived from alignment at scaffold735_size104922:69830..70353- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'GL17472' has the following synonyms
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