putative NPDC-1, maker-scaffold740_size104176-snap-gene-0.27 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of putative NPDC-1 vs. L. salmonis genes
Match: EMLSAG00000010014 (supercontig:LSalAtl2s:LSalAtl2s659:208051:233740:1 gene:EMLSAG00000010014 transcript:EMLSAT00000010014 description:"maker-LSalAtl2s659-snap-gene-2.11") HSP 1 Score: 169.859 bits (429), Expect = 6.373e-51 Identity = 95/184 (51.63%), Postives = 127/184 (69.02%), Query Frame = 0 Query: 110 FPQLTAAQRKFGVNPAYKSFYDPSFREIE----GVAKDDLAPKHKADPTDEVVEDFLTSEDARRQSAKKASIHQ-SSARSGVSRREMEQDKIDDIYFTTIVGVSSALAVFAVVGAGFCYHRIRRNSKASEDVEYPAYGVTGPGGKESSPTSGTDRKLAQNAQMYHYQHQKQQMIAFDSSMETKR 288 +PQL+ +FGVNP+Y SFY+PS ++IE D++ + + D DE V+ + E A + + KKA I A S +++++ DI+F +IV SALAV +VGAGFCYH++++NS+A E+VEYPAYGVTGP GKE SPTSG DRKLAQ+AQMYHYQHQKQQMIAFD S ++R Sbjct: 75 YPQLSREAAEFGVNPSYNSFYEPSLKKIELEERNPMSDEMLERKRLD--DENVDQYQL-EVAXKMNEKKAEISMLPRALSSTHEQDIQRS---DIFFISIVAGISALAVMTIVGAGFCYHKVQKNSRAGEEVEYPAYGVTGP-GKEISPTSG-DRKLAQSAQMYHYQHQKQQMIAFDRSSGSER 250
BLAST of putative NPDC-1 vs. SwissProt
Match: gi|22261810|sp|Q9NQX5.2|NPDC1_HUMAN (RecName: Full=Neural proliferation differentiation and control protein 1; Short=NPDC-1; Flags: Precursor) HSP 1 Score: 56.6102 bits (135), Expect = 6.644e-8 Identity = 32/97 (32.99%), Postives = 50/97 (51.55%), Query Frame = 0 Query: 197 DDIYFTTIVGVSSALAVFAVVGAGFCYHRIRRNSKASEDVEYPAYGVTGPGGKESSPTSGTDRKLAQNAQMYHYQHQKQQMIAFDSSME-TKRLQTS 292 D + I+ A A V A C+ R++R + ++ +Y PG + S D++LAQ+A+MYHYQHQ+QQM+ + E K L T+ Sbjct: 181 DGLALVLILAFCVAGAAALSV-ASLCWCRLQREIRLTQKADY--ATAKAPGSPAAPRISPGDQRLAQSAEMYHYQHQRQQMLCLERHKEPPKELDTA 274
BLAST of putative NPDC-1 vs. nr
Match: gi|675388427|gb|KFM81324.1| (Neural proliferation differentiation and control protein 1, partial [Stegodyphus mimosarum]) HSP 1 Score: 120.168 bits (300), Expect = 2.675e-28 Identity = 56/101 (55.45%), Postives = 70/101 (69.31%), Query Frame = 0 Query: 192 EQDKIDDIYFTTIVGVSSALAVFAVVGAGFCYHRIRRNSKASEDVEYPAYGVTGPGGKESSPTSGTDRKLAQNAQMYHYQHQKQQMIAFDSSMETKRLQTS 292 E+D DIYF IV A +F V+ AGFC++R+++N KA+ DV+YPAYGVTGP SSP DRKLAQ+AQMYHYQHQKQQ+IA + + TK S Sbjct: 130 EEDSFSDIYFVAIVAGCCAAGIFGVISAGFCFYRLQKNRKAALDVDYPAYGVTGPCKDVSSPNG--DRKLAQSAQMYHYQHQKQQIIAVEKAGSTKNASAS 228
BLAST of putative NPDC-1 vs. nr
Match: gi|1325312342|ref|XP_023337808.1| (uncharacterized protein LOC111708614 [Eurytemora affinis]) HSP 1 Score: 119.783 bits (299), Expect = 1.161e-27 Identity = 74/180 (41.11%), Postives = 101/180 (56.11%), Query Frame = 0 Query: 110 FPQLTAAQRKFGVNPAYKSFY--DP---SFREIEGVAKDDLAPKHKADPTDEVVEDFLTSEDARRQSAKKASIHQSSARSGVSRR-----EMEQDKIDDIYFTTIVGVSSALAVFAVVGAGFCYHRIRRNSKASEDVEYPAYGVTGPGGKESSPTSGTDRKLAQNAQMYHYQHQKQQMIA 279 FP+L+ ++FGV+P + +Y DP FR E A L + V E + +ED + + + AR GV+ R E+ K DD ++T V S+A V V GAG+CY R + K SE++EYP+YG+TGP K++SP G DRKLAQ+AQMYHYQHQK QMI Sbjct: 132 FPKLSFKMKQFGVHPETEEYYAKDPDFLGFRLQEREATQSLVEHVDHSVFEGVPEIEIDTEDPQSEEKR--------ARMGVASRLRWDGYTEETKDDDFFYTVFVASSTAFVVLGVAGAGYCYQRTMKRRKDSEELEYPSYGITGP-AKDASP--GGDRKLAQSAQMYHYQHQKSQMIG 300
BLAST of putative NPDC-1 vs. nr
Match: gi|1316168182|ref|XP_023229471.1| (protein cab-1-like [Centruroides sculpturatus]) HSP 1 Score: 120.939 bits (302), Expect = 3.600e-27 Identity = 71/173 (41.04%), Postives = 104/173 (60.12%), Query Frame = 0 Query: 130 YDPS-FREIEGVAK-DDLAPKHKADPTDEVVEDFLTSEDARRQSAKKASIHQSSARSGVSRRE-----MEQDK---IDDIYFTTIVGVSSALAVFAVVGAGFCYHRIRRNSKASEDVEYPAYGVTGPGGKESSPTSGTDRKLAQNAQMYHYQHQKQQMIAFDSSMETKRLQTS 292 Y PS +IEG K DD H +D + E+ + ++ + S+ S+ S V+ + E+D+ D+YF IV SA+A+F VV AG+C+++++++SKA+ DV+YPAYG+TGP + +SP DRKLAQ+AQMYHYQHQKQQMIA + + T TS Sbjct: 285 YKPSAIEDIEGEGKVDDFYKTHSVSNSDIIKEEKKSPTPVQQ---AEFSVTNSANNSPVAYHQKQLPNTEKDESKGFSDVYFVAIVAGCSAVAIFGVVAAGYCFYKLQKSSKAAADVDYPAYGITGPSKETTSPNG--DRKLAQSAQMYHYQHQKQQMIAVEKASSTHHASTS 452
BLAST of putative NPDC-1 vs. nr
Match: gi|926618673|ref|XP_013774552.1| (uncharacterized protein LOC106459475 [Limulus polyphemus]) HSP 1 Score: 115.546 bits (288), Expect = 6.511e-26 Identity = 56/115 (48.70%), Postives = 81/115 (70.43%), Query Frame = 0 Query: 179 QSSARSGVSRREME-QDKIDDIYFTTIVGVSSALAVFAVVGAGFCYHRIRRNSKASEDVEYPAYGVTGPGGKESSPTSGTDRKLAQNAQMYHYQHQKQQMIAFDSSMETKRLQTS 292 S +R+ V ++ E + + DIYF IV SA A+F V+GAG C++R ++ ++A+ D+EYPAYGVTGP KE + +G DRKLA +AQMYHYQHQKQQM+A + + + RL ++ Sbjct: 218 HSFSRNEVDLKDKESKSPLSDIYFVAIVAGCSAAAIFGVIGAGICFYRFQKKNQAAADIEYPAYGVTGPSNKEKTSPNG-DRKLAHSAQMYHYQHQKQQMLAVEKT-NSNRLTSA 330
BLAST of putative NPDC-1 vs. nr
Match: gi|926623657|ref|XP_013777255.1| (uncharacterized protein LOC106461935 [Limulus polyphemus]) HSP 1 Score: 112.464 bits (280), Expect = 8.721e-25 Identity = 49/87 (56.32%), Postives = 65/87 (74.71%), Query Frame = 0 Query: 196 IDDIYFTTIVGVSSALAVFAVVGAGFCYHRIRRNSKASEDVEYPAYGVTGPGGKESSPTSGTDRKLAQNAQMYHYQHQKQQMIAFDS 282 + DIYF IV ++A F V+ AG C++R ++ SKA+ +VEYPAYGVTGPG KE + +G DRKLA +AQMYHYQHQK QMI+ ++ Sbjct: 223 VSDIYFVAIVAGCCSVATFGVIAAGICFYRFQKKSKAARNVEYPAYGVTGPGNKEKTSPNG-DRKLAHSAQMYHYQHQKHQMISVEN 308
BLAST of putative NPDC-1 vs. nr
Match: gi|318087280|gb|ADV40232.1| (putative NPDC-1, partial [Latrodectus hesperus]) HSP 1 Score: 110.153 bits (274), Expect = 1.319e-24 Identity = 51/101 (50.50%), Postives = 68/101 (67.33%), Query Frame = 0 Query: 192 EQDKIDDIYFTTIVGVSSALAVFAVVGAGFCYHRIRRNSKASEDVEYPAYGVTGPGGKESSPTSGTDRKLAQNAQMYHYQHQKQQMIAFDSSMETKRLQTS 292 E D D+YF IV A+ +F V+ AG C++R++++ KA+ DV+YPAYGVTGP +SP DRKLAQ+AQMYH+Q QKQQMIA + + TK S Sbjct: 177 EDDSFSDVYFVAIVAGCCAVGIFGVISAGICFYRLQKHQKAAADVDYPAYGVTGPCKDVTSPNG--DRKLAQSAQMYHFQLQKQQMIAVEKAGSTKNTSAS 275
BLAST of putative NPDC-1 vs. nr
Match: gi|1005950758|ref|XP_015783711.1| (PREDICTED: protein cab-1-like isoform X1 [Tetranychus urticae]) HSP 1 Score: 110.153 bits (274), Expect = 7.460e-24 Identity = 52/99 (52.53%), Postives = 71/99 (71.72%), Query Frame = 0 Query: 198 DIYFTTIVGVSSALAVFAVVGAGFCYHRIRRNSKASEDVEYPAYGVTGPGGKESSPTSGT----DRKLAQNAQMYHYQHQKQQMIAFDSSMETKRLQTS 292 D+YF IV SS A+FAV+GAG+C++R +++SK++ DV+YPAYGV GP KES+ + DRKLAQ+AQMYHY HQKQQMIA + + ++ S Sbjct: 248 DLYFVAIVVGSSGAAIFAVIGAGYCFYRFQQHSKSAADVDYPAYGVVGPITKESANSGNISPVGDRKLAQSAQMYHYHHQKQQMIASEKVVASRHTSAS 346
BLAST of putative NPDC-1 vs. nr
Match: gi|1005950760|ref|XP_015783712.1| (PREDICTED: protein cab-1-like isoform X2 [Tetranychus urticae]) HSP 1 Score: 110.153 bits (274), Expect = 8.115e-24 Identity = 52/99 (52.53%), Postives = 71/99 (71.72%), Query Frame = 0 Query: 198 DIYFTTIVGVSSALAVFAVVGAGFCYHRIRRNSKASEDVEYPAYGVTGPGGKESSPTSGT----DRKLAQNAQMYHYQHQKQQMIAFDSSMETKRLQTS 292 D+YF IV SS A+FAV+GAG+C++R +++SK++ DV+YPAYGV GP KES+ + DRKLAQ+AQMYHY HQKQQMIA + + ++ S Sbjct: 245 DLYFVAIVVGSSGAAIFAVIGAGYCFYRFQQHSKSAADVDYPAYGVVGPITKESANSGNISPVGDRKLAQSAQMYHYHHQKQQMIASEKVVASRHTSAS 343
BLAST of putative NPDC-1 vs. nr
Match: gi|1009573428|ref|XP_015918623.1| (uncharacterized protein LOC107448048 [Parasteatoda tepidariorum]) HSP 1 Score: 108.612 bits (270), Expect = 1.221e-23 Identity = 50/101 (49.50%), Postives = 68/101 (67.33%), Query Frame = 0 Query: 192 EQDKIDDIYFTTIVGVSSALAVFAVVGAGFCYHRIRRNSKASEDVEYPAYGVTGPGGKESSPTSGTDRKLAQNAQMYHYQHQKQQMIAFDSSMETKRLQTS 292 E + D+YF IV A+ +F V+ AG C++R++++ KA+ DV+YPAYGVTGP +SP DRKLAQ+AQMYH+Q QKQQMIA + + TK S Sbjct: 183 EDESFSDVYFVAIVAGCCAVGIFGVISAGICFYRLQKSQKAAADVDYPAYGVTGPCKDVTSPNG--DRKLAQSAQMYHFQLQKQQMIAVEKAGSTKNTSAS 281
BLAST of putative NPDC-1 vs. nr
Match: gi|926633016|ref|XP_013782296.1| (uncharacterized protein LOC106466550 [Limulus polyphemus]) HSP 1 Score: 105.145 bits (261), Expect = 3.424e-22 Identity = 50/104 (48.08%), Postives = 67/104 (64.42%), Query Frame = 0 Query: 189 REMEQDKIDDIYFTTIVGVSSALAVFAVVGAGFCYHRIRRNSKASEDVEYPAYGVTGPGGKESSPTSGTDRKLAQNAQMYHYQHQKQQMIAFDSSMETKRLQTS 292 ++ ++ D+YF IV A A+F V+ G+C++ + +KA+ V YPAYGVT P KE + SG DRKLAQ+AQMYHYQHQKQQMIA + S +R S Sbjct: 200 KKRDESVFGDLYFVAIVAGCGAAAIFGVIAMGYCFYTYQNQTKAAASVGYPAYGVTQPHSKEEAFPSG-DRKLAQSAQMYHYQHQKQQMIAVEKSTSNRRTSVS 302 The following BLAST results are available for this feature:
BLAST of putative NPDC-1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of putative NPDC-1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 1
BLAST of putative NPDC-1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold740_size104176:7102..11761- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold740_size104176-snap-gene-0.27 ID=maker-scaffold740_size104176-snap-gene-0.27|Name=putative NPDC-1|organism=Tigriopus kingsejongensis|type=gene|length=4660bp|location=Sequence derived from alignment at scaffold740_size104176:7102..11761- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'putative NPDC-1' has the following synonyms
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