ap-1 complex subunit sigma-1a, maker-scaffold754_size102093-snap-gene-0.10 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of ap-1 complex subunit sigma-1a vs. L. salmonis genes
Match: EMLSAG00000001508 (supercontig:LSalAtl2s:LSalAtl2s125:280180:281536:1 gene:EMLSAG00000001508 transcript:EMLSAT00000001508 description:"maker-LSalAtl2s125-augustus-gene-2.13") HSP 1 Score: 260.381 bits (664), Expect = 2.844e-90 Identity = 121/153 (79.08%), Postives = 142/153 (92.81%), Query Frame = 0 Query: 22 MIHFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQEEEIIGLALKD 174 MIHFI+LFSRQGKIRLQKW+EAR ++EKKKITRELT+ ++ARKPKMSNF+EW D IVYKRYASLFF FAID+ DNEL+ LE++HRYVEVLDKYFGSVCELDIIFNFE+AYFILDELI+ G++QETSKK ++KQIE+ADN+QE+EII LALKD Sbjct: 1 MIHFILLFSRQGKIRLQKWFEARTDKEKKKITRELTSIIIARKPKMSNFLEWHDKVIVYKRYASLFFCFAIDRNDNELLTLEIIHRYVEVLDKYFGSVCELDIIFNFERAYFILDELILAGDVQETSKKAILKQIEYADNYQEDEIISLALKD 153
BLAST of ap-1 complex subunit sigma-1a vs. L. salmonis genes
Match: EMLSAG00000007257 (supercontig:LSalAtl2s:LSalAtl2s408:42626:44752:1 gene:EMLSAG00000007257 transcript:EMLSAT00000007257 description:"maker-LSalAtl2s408-augustus-gene-0.13") HSP 1 Score: 218.009 bits (554), Expect = 1.762e-73 Identity = 100/145 (68.97%), Postives = 127/145 (87.59%), Query Frame = 0 Query: 22 MIHFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQEEE 166 MI +++LFSRQGK+RLQK++ A+ E+ KKK++REL +L+RKPKMS+F+EWKDL+IVYKRYASL+F AI++ DNEL+ LE++HRYVE+LDKYFGSVCELDIIFNFEKAYF+LDEL++GGE+QETSKK V+K I D QEEE Sbjct: 1 MIQYMLLFSRQGKLRLQKYFTAQSEKSKKKLSRELINNILSRKPKMSSFLEWKDLKIVYKRYASLYFCCAIEEEDNELVVLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELLLGGEIQETSKKNVLKAISAQDCLQEEE 145
BLAST of ap-1 complex subunit sigma-1a vs. L. salmonis genes
Match: EMLSAG00000009173 (supercontig:LSalAtl2s:LSalAtl2s57:41205:42872:1 gene:EMLSAG00000009173 transcript:EMLSAT00000009173 description:"maker-LSalAtl2s57-augustus-gene-0.2") HSP 1 Score: 199.134 bits (505), Expect = 6.139e-66 Identity = 94/158 (59.49%), Postives = 125/158 (79.11%), Query Frame = 0 Query: 22 MIHFIILFSRQGKIRLQKWYEA---RPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDK--TDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQEEEIIGLALKD 174 MIH + LFSRQGK+RL K+Y A + E++K KI +E+ + +L+R MS FIEW+D IVYKRYASL+FLF +DK DNELI LEL+HRYVEVLD+YFG+VCELDII+NFEKA+F+LDE+I+ GE+ E S+K V+K + F+D FQE+EI+ A+ + Sbjct: 1 MIHLVTLFSRQGKVRLCKFYNANLAKSEKDKTKIIKEMISNILSRTASMSCFIEWRDHTIVYKRYASLYFLFVVDKYGVDNELIILELIHRYVEVLDQYFGAVCELDIIYNFEKAHFLLDEMIMSGEIMEPSRKAVVKYVHFSDQFQEDEILFHAVSE 158
BLAST of ap-1 complex subunit sigma-1a vs. L. salmonis genes
Match: EMLSAG00000006382 (supercontig:LSalAtl2s:LSalAtl2s34:495818:496246:-1 gene:EMLSAG00000006382 transcript:EMLSAT00000006382 description:"augustus_masked-LSalAtl2s34-processed-gene-5.1") HSP 1 Score: 139.428 bits (350), Expect = 1.003e-42 Identity = 62/142 (43.66%), Postives = 97/142 (68.31%), Query Frame = 0 Query: 22 MIHFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQ 163 MI F+++ +R GK RL KWY + EK+K+ E+ V R K +NF+E++ +IVY+RYA L+F +D DN L LE +H +VEVL++YF +VCELD++FNF K Y ++DE+ + GE++ETS+ V+KQ+ ++ + Sbjct: 1 MIKFVMIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHACVTVRDAKHTNFVEFRHYKIVYRRYAGLYFCICVDVNDNNLYYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLTMLNSLE 142
BLAST of ap-1 complex subunit sigma-1a vs. L. salmonis genes
Match: EMLSAG00000001262 (supercontig:LSalAtl2s:LSalAtl2s1206:25785:30904:1 gene:EMLSAG00000001262 transcript:EMLSAT00000001262 description:"maker-LSalAtl2s1206-augustus-gene-0.19") HSP 1 Score: 115.546 bits (288), Expect = 7.736e-33 Identity = 57/151 (37.75%), Postives = 100/151 (66.23%), Query Frame = 0 Query: 22 MIHFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEW------KDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQEEE 166 MI I++F+ +GK R+ K+YE E ++++I +E V R + NF+E D +++Y+ YA+L+F+F +D +++EL L+L+ +VE LDK F +VCELD+IF+ +K +FIL+EL++GG + ET+ ++++IE ++EE Sbjct: 1 MIRAILVFNNRGKPRVNKFYEYYTETDQQQIIKETFQLVSKRDDNVCNFLEGGSLIGGSDFKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHFILNELVMGGMVLETNMTEILQRIEEQSKLEKEE 151
BLAST of ap-1 complex subunit sigma-1a vs. SwissProt
Match: gi|3023308|sp|P56377.1|AP1S2_HUMAN (RecName: Full=AP-1 complex subunit sigma-2; AltName: Full=Adaptor protein complex AP-1 subunit sigma-1B; AltName: Full=Adaptor-related protein complex 1 subunit sigma-1B; AltName: Full=Clathrin assembly protein complex 1 sigma-1B small chain; AltName: Full=Golgi adaptor HA1/AP1 adaptin sigma-1B subunit; AltName: Full=Sigma 1B subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 1B; AltName: Full=Sigma1B-adaptin) HSP 1 Score: 220.32 bits (560), Expect = 5.527e-73 Identity = 105/143 (73.43%), Postives = 124/143 (86.71%), Query Frame = 0 Query: 23 IHFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQEE 165 + F++LFSRQGK+RLQKWY ++EKKKITREL TVLARKPKM +F+EW+DL+IVYKRYASL+F AI+ DNELI LE++HRYVE+LDKYFGSVCELDIIFNFEKAYFILDE ++GGE+QETSKK V+K IE AD QEE Sbjct: 1 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSKKNVLKAIEQADLLQEE 143
BLAST of ap-1 complex subunit sigma-1a vs. SwissProt
Match: gi|21541960|sp|Q9DB50.1|AP1S2_MOUSE (RecName: Full=AP-1 complex subunit sigma-2; AltName: Full=Adaptor protein complex AP-1 subunit sigma-1B; AltName: Full=Adaptor-related protein complex 1 subunit sigma-1B; AltName: Full=Clathrin assembly protein complex 1 sigma-1B small chain; AltName: Full=Golgi adaptor HA1/AP1 adaptin sigma-1B subunit; AltName: Full=Sigma 1B subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 1B; AltName: Full=Sigma1B-adaptin >gi|122140822|sp|Q3ZBS3.1|AP1S2_BOVIN RecName: Full=AP-1 complex subunit sigma-2; AltName: Full=Adaptor protein complex AP-1 subunit sigma-1B; AltName: Full=Adaptor-related protein complex 1 subunit sigma-1B; AltName: Full=Clathrin assembly protein complex 1 sigma-1B small chain; AltName: Full=Golgi adaptor HA1/AP1 adaptin sigma-1B subunit; AltName: Full=Sigma 1B subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 1B; AltName: Full=Sigma1B-adaptin) HSP 1 Score: 219.55 bits (558), Expect = 1.514e-72 Identity = 104/143 (72.73%), Postives = 124/143 (86.71%), Query Frame = 0 Query: 23 IHFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQEE 165 + F++LFSRQGK+RLQKWY ++EKKKITREL TVLARKPKM +F+EW+DL+IVYKRYASL+F AI+ DNELI LE++HRYVE+LDKYFGSVCELDIIFNFEKAYFILDE ++GGE+QETSKK V+K IE AD QE+ Sbjct: 1 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSKKNVLKAIEQADLLQED 143
BLAST of ap-1 complex subunit sigma-1a vs. SwissProt
Match: gi|48428719|sp|P61966.1|AP1S1_HUMAN (RecName: Full=AP-1 complex subunit sigma-1A; AltName: Full=Adaptor protein complex AP-1 subunit sigma-1A; AltName: Full=Adaptor-related protein complex 1 subunit sigma-1A; AltName: Full=Clathrin assembly protein complex 1 sigma-1A small chain; AltName: Full=Clathrin coat assembly protein AP19; AltName: Full=Golgi adaptor HA1/AP1 adaptin sigma-1A subunit; AltName: Full=HA1 19 kDa subunit; AltName: Full=Sigma 1a subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 1A; AltName: Full=Sigma1A-adaptin >gi|48428720|sp|P61967.1|AP1S1_MOUSE RecName: Full=AP-1 complex subunit sigma-1A; AltName: Full=Adaptor protein complex AP-1 subunit sigma-1A; AltName: Full=Adaptor-related protein complex 1 subunit sigma-1A; AltName: Full=Clathrin assembly protein complex 1 sigma-1A small chain; AltName: Full=Clathrin coat assembly protein AP19; AltName: Full=Golgi adaptor HA1/AP1 adaptin sigma-1A subunit; AltName: Full=HA1 19 kDa subunit; AltName: Full=Sigma 1a subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 1A; AltName: Full=Sigma1A-adaptin) HSP 1 Score: 217.624 bits (553), Expect = 7.895e-72 Identity = 101/145 (69.66%), Postives = 125/145 (86.21%), Query Frame = 0 Query: 22 MIHFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQEEE 166 M+ F++LFSRQGK+RLQKWY A ++E+KK+ REL VLARKPKM +F+EW+DL++VYKRYASL+F AI+ DNELI LEL+HRYVE+LDKYFGSVCELDIIFNFEKAYFILDE ++GG++Q+TSKK V+K IE AD QEE+ Sbjct: 1 MMRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQEED 145
BLAST of ap-1 complex subunit sigma-1a vs. SwissProt
Match: gi|122134020|sp|Q1JQ98.1|AP1S1_BOVIN (RecName: Full=AP-1 complex subunit sigma-1A; AltName: Full=Adaptor protein complex AP-1 subunit sigma-1A; AltName: Full=Adaptor-related protein complex 1 subunit sigma-1A; AltName: Full=Clathrin assembly protein complex 1 sigma-1A small chain; AltName: Full=Clathrin coat assembly protein AP19; AltName: Full=Golgi adaptor HA1/AP1 adaptin sigma-1A subunit; AltName: Full=HA1 19 kDa subunit; AltName: Full=Sigma 1a subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 1A; AltName: Full=Sigma1A-adaptin) HSP 1 Score: 215.312 bits (547), Expect = 6.380e-71 Identity = 100/144 (69.44%), Postives = 124/144 (86.11%), Query Frame = 0 Query: 23 IHFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQEEE 166 + F++LFSRQGK+RLQKWY A ++E+KK+ REL VLARKPKM +F+EW+DL++VYKRYASL+F AI+ DNELI LEL+HRYVE+LDKYFGSVCELDIIFNFEKAYFILDE ++GG++Q+TSKK V+K IE AD QEE+ Sbjct: 1 MRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQEED 144
BLAST of ap-1 complex subunit sigma-1a vs. SwissProt
Match: gi|81912002|sp|Q7TN05.1|AP1S3_MOUSE (RecName: Full=AP-1 complex subunit sigma-3; AltName: Full=Adaptor protein complex AP-1 subunit sigma-1C; AltName: Full=Adaptor-related protein complex 1 subunit sigma-1C; AltName: Full=Clathrin assembly protein complex 1 sigma-1C small chain; AltName: Full=Golgi adaptor HA1/AP1 adaptin sigma-1C subunit; AltName: Full=Sigma 1C subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 1C; AltName: Full=Sigma1C-adaptin) HSP 1 Score: 212.616 bits (540), Expect = 5.155e-70 Identity = 100/143 (69.93%), Postives = 123/143 (86.01%), Query Frame = 0 Query: 22 MIHFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQE 164 MIHFI+LFSRQGK+RLQKWY P++E+KKITR++ TVL+R + S+FI+WK+L++VYKRYASL+F AI+ DNEL+ LE+VHRYVE+LDKYFG+VCELDIIFNFEKAYFILDE IIGGE+QETSKK +K IE +D QE Sbjct: 1 MIHFILLFSRQGKLRLQKWYTTLPDKERKKITRDIIQTVLSRGHRTSSFIDWKELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIGGEIQETSKKTAVKAIEDSDMLQE 143
BLAST of ap-1 complex subunit sigma-1a vs. SwissProt
Match: gi|21541959|sp|Q96PC3.1|AP1S3_HUMAN (RecName: Full=AP-1 complex subunit sigma-3; AltName: Full=Adaptor protein complex AP-1 subunit sigma-1C; AltName: Full=Adaptor-related protein complex 1 subunit sigma-1C; AltName: Full=Clathrin assembly protein complex 1 sigma-1C small chain; AltName: Full=Golgi adaptor HA1/AP1 adaptin sigma-1C subunit; AltName: Full=Sigma 1C subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 1C; AltName: Full=Sigma1C-adaptin) HSP 1 Score: 209.149 bits (531), Expect = 1.204e-68 Identity = 98/143 (68.53%), Postives = 122/143 (85.31%), Query Frame = 0 Query: 22 MIHFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQE 164 MIHFI+LFSRQGK+RLQKWY P++E+KKITRE+ +L+R + S+F++WK+L++VYKRYASL+F AI+ DNEL+ LE+VHRYVE+LDKYFG+VCELDIIFNFEKAYFILDE IIGGE+QETSKK +K IE +D QE Sbjct: 1 MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIGGEIQETSKKIAVKAIEDSDMLQE 143
BLAST of ap-1 complex subunit sigma-1a vs. SwissProt
Match: gi|75272482|sp|Q8LEZ8.1|AP1S1_ARATH (RecName: Full=AP-1 complex subunit sigma-1; AltName: Full=Adaptor AP-1 19 kDa protein; AltName: Full=Adaptor protein complex AP-1 sigma-1 subunit; AltName: Full=Adaptor-related protein complex 1 sigma-1 subunit; AltName: Full=Clathrin assembly protein complex 1 sigma-1 small chain; AltName: Full=Clathrin assembly small subunit protein AP19-1; Short=AtAP19-1; AltName: Full=Sigma 1 subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 1; AltName: Full=Sigma1-adaptin) HSP 1 Score: 191.045 bits (484), Expect = 2.112e-61 Identity = 86/143 (60.14%), Postives = 110/143 (76.92%), Query Frame = 0 Query: 22 MIHFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQE 164 MIHF++L SRQGK+RL KWY ++E+ K+ REL+ +L R PK+ NFIEW+ ++VYKRYASL+F ID+ DNEL LE++H YVE+LD+YFGSVCELD+IFNF KAY+ILDEL+I GELQE+SKK V + I D E Sbjct: 1 MIHFVLLVSRQGKVRLTKWYSPYTQKERSKVIRELSGVILNRGPKLCNFIEWRGYKVVYKRYASLYFCMCIDEADNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARIISAQDQLVE 143
BLAST of ap-1 complex subunit sigma-1a vs. SwissProt
Match: gi|75097963|sp|O23685.1|AP1S2_ARATH (RecName: Full=AP-1 complex subunit sigma-2; AltName: Full=Adaptor AP-1 19 kDa protein; AltName: Full=Adaptor protein complex AP-1 sigma-2 subunit; AltName: Full=Adaptor-related protein complex 1 sigma-2 subunit; AltName: Full=Clathrin assembly protein complex 1 sigma-2 small chain; AltName: Full=Clathrin assembly small subunit protein AP19-2; Short=AtAP19-2; AltName: Full=Sigma 2 subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 2; AltName: Full=Sigma2-adaptin) HSP 1 Score: 190.274 bits (482), Expect = 4.294e-61 Identity = 85/143 (59.44%), Postives = 110/143 (76.92%), Query Frame = 0 Query: 22 MIHFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQE 164 MIHF++L SRQGK+RL KWY ++E+ K+ REL+ +L R PK+ NF+EW+ ++VYKRYASL+F ID+ DNEL LE++H YVE+LD+YFGSVCELD+IFNF KAY+ILDEL+I GELQE+SKK V + I D E Sbjct: 1 MIHFVLLVSRQGKVRLTKWYSPYAQKERSKVIRELSGVILNRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARIISAQDQLVE 143
BLAST of ap-1 complex subunit sigma-1a vs. SwissProt
Match: gi|182627487|sp|B0G185.1|AP1S2_DICDI (RecName: Full=AP-1 complex subunit sigma-2; AltName: Full=Adaptor protein complex AP-1 subunit sigma-1B; AltName: Full=Adaptor-related protein complex 1 subunit sigma-1B; AltName: Full=Clathrin assembly protein complex 1 sigma-1B small chain; AltName: Full=Sigma 1B subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 1B; AltName: Full=Sigma1B-adaptin) HSP 1 Score: 182.956 bits (463), Expect = 2.775e-58 Identity = 83/141 (58.87%), Postives = 108/141 (76.60%), Query Frame = 0 Query: 24 HFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQE 164 HF++L SRQGK RL KWY +EK + TRE+ VL R PK+ NF+EWK+ +I++KRYASL+F+ D+ DNELI LE++H +VE+LD+YFG+VCELD+IFNF KAY+ILDELI+ GELQETSKK V++ I D E Sbjct: 4 HFLLLLSRQGKTRLTKWYSPFTNKEKSRFTREIGNMVLNRPPKLCNFLEWKEYKIIFKRYASLYFVVCCDREDNELIVLEIIHHFVEILDRYFGNVCELDLIFNFHKAYYILDELIMAGELQETSKKTVLRLISQQDTLLE 144
BLAST of ap-1 complex subunit sigma-1a vs. SwissProt
Match: gi|74625414|sp|Q9P7N2.1|AP1S1_SCHPO (RecName: Full=AP-1 complex subunit sigma-1; AltName: Full=Sigma1-adaptin; AltName: Full=Valproic acid-sensitive protein 2) HSP 1 Score: 174.096 bits (440), Expect = 1.001e-54 Identity = 77/138 (55.80%), Postives = 109/138 (78.99%), Query Frame = 0 Query: 23 IHFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFAD 160 I F +L SRQGK+RL KW+ +E+ KI R++++ V+ RKPKM NF+E+K +IVY+RYASLFF+ I++ DNELI LE++H++VE LDKYFG+VCELD+IFNFEKAY++++EL++ GELQE+SK V+ + D Sbjct: 3 IKFFLLVSRQGKVRLAKWFNTLSIKERAKIIRDVSSLVITRKPKMCNFVEYKGEKIVYRRYASLFFVCGIEQDDNELIILEVIHKFVECLDKYFGNVCELDLIFNFEKAYYVMEELLLAGELQESSKTNVLSAVLAGD 140
BLAST of ap-1 complex subunit sigma-1a vs. nr
Match: gi|1325305217|ref|XP_023334213.1| (AP-1 complex subunit sigma-2-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 263.848 bits (673), Expect = 1.160e-87 Identity = 128/153 (83.66%), Postives = 141/153 (92.16%), Query Frame = 0 Query: 22 MIHFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQEEEIIGLALKD 174 MIHFI+LFSRQGK+RLQKWYEAR EKKKI R+LT+T+L+RKPKMSNFIE++DLQIVYKRYASLFF FAID+ DNEL ALE++HRYVEVLDKYFGSVCELDIIFNFEKAYFILDELI+GGELQETSKK V+ QIE AD FQEEEII LALKD Sbjct: 1 MIHFILLFSRQGKLRLQKWYEARETSEKKKIVRDLTSTILSRKPKMSNFIEYRDLQIVYKRYASLFFCFAIDREDNELGALEVIHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELILGGELQETSKKAVLSQIEMADKFQEEEIIELALKD 153
BLAST of ap-1 complex subunit sigma-1a vs. nr
Match: gi|1325305219|ref|XP_023334214.1| (AP-1 complex subunit sigma-2-like isoform X3 [Eurytemora affinis]) HSP 1 Score: 261.151 bits (666), Expect = 1.197e-86 Identity = 127/152 (83.55%), Postives = 140/152 (92.11%), Query Frame = 0 Query: 22 MIHFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQEEEIIGLALK 173 MIHFI+LFSRQGK+RLQKWYEAR EKKKI R+LT+T+L+RKPKMSNFIE++DLQIVYKRYASLFF FAID+ DNEL ALE++HRYVEVLDKYFGSVCELDIIFNFEKAYFILDELI+GGELQETSKK V+ QIE AD FQEEEII LALK Sbjct: 1 MIHFILLFSRQGKLRLQKWYEARETSEKKKIVRDLTSTILSRKPKMSNFIEYRDLQIVYKRYASLFFCFAIDREDNELGALEVIHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELILGGELQETSKKAVLSQIEMADKFQEEEIIELALK 152
BLAST of ap-1 complex subunit sigma-1a vs. nr
Match: gi|1325305215|ref|XP_023334212.1| (AP-1 complex subunit sigma-2-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 261.922 bits (668), Expect = 1.720e-86 Identity = 127/152 (83.55%), Postives = 140/152 (92.11%), Query Frame = 0 Query: 22 MIHFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQEEEIIGLALK 173 MIHFI+LFSRQGK+RLQKWYEAR EKKKI R+LT+T+L+RKPKMSNFIE++DLQIVYKRYASLFF FAID+ DNEL ALE++HRYVEVLDKYFGSVCELDIIFNFEKAYFILDELI+GGELQETSKK V+ QIE AD FQEEEII LALK Sbjct: 1 MIHFILLFSRQGKLRLQKWYEARETSEKKKIVRDLTSTILSRKPKMSNFIEYRDLQIVYKRYASLFFCFAIDREDNELGALEVIHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELILGGELQETSKKAVLSQIEMADKFQEEEIIELALK 152
BLAST of ap-1 complex subunit sigma-1a vs. nr
Match: gi|290562383|gb|ADD38588.1| (AP-1 complex subunit sigma-1A [Lepeophtheirus salmonis]) HSP 1 Score: 260.381 bits (664), Expect = 2.663e-86 Identity = 121/153 (79.08%), Postives = 142/153 (92.81%), Query Frame = 0 Query: 22 MIHFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQEEEIIGLALKD 174 MIHFI+LFSRQGKIRLQKW+EAR ++EKKKITRELT+ ++ARKPKMSNF+EW D IVYKRYASLFF FAID+ DNEL+ LE++HRYVEVLDKYFGSVCELDIIFNFE+AYFILDELI+ G++QETSKK ++KQIE+ADN+QE+EII LALKD Sbjct: 1 MIHFILLFSRQGKIRLQKWFEARTDKEKKKITRELTSIIIARKPKMSNFLEWHDKVIVYKRYASLFFCFAIDRNDNELLTLEIIHRYVEVLDKYFGSVCELDIIFNFERAYFILDELILAGDVQETSKKAILKQIEYADNYQEDEIISLALKD 153
BLAST of ap-1 complex subunit sigma-1a vs. nr
Match: gi|1067073137|ref|XP_018020041.1| (PREDICTED: AP-1 complex subunit sigma-2-like isoform X5 [Hyalella azteca]) HSP 1 Score: 235.728 bits (600), Expect = 1.503e-76 Identity = 110/152 (72.37%), Postives = 134/152 (88.16%), Query Frame = 0 Query: 23 IHFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQEEEIIGLALKD 174 + F++LFSRQGK+RLQKWY A P++ KKKITREL TT+LARKPKMS+F+EW+DL+IVYKRYASL+F AID+ DNEL+ LE++HRYVE+LDKYFGSVCELDIIFNFEKAYF+LDEL++GGE+ ETSKK V+K I D QEEEI+ LAL+D Sbjct: 1 MQFMLLFSRQGKLRLQKWYVAHPDKAKKKITRELITTILARKPKMSSFLEWRDLKIVYKRYASLYFCCAIDQEDNELLTLEVIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELVVGGEVCETSKKNVLKAIAAQDLLQEEEIVELALRD 152
BLAST of ap-1 complex subunit sigma-1a vs. nr
Match: gi|345452843|gb|AEN94573.1| (clathrin coat assembly protein ap19 [Scylla paramamosain]) HSP 1 Score: 234.572 bits (597), Expect = 4.210e-76 Identity = 108/153 (70.59%), Postives = 136/153 (88.89%), Query Frame = 0 Query: 22 MIHFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQEEEIIGLALKD 174 M+ F++LFSRQGK+RLQKWYEA P++ KKKITREL +T+LARKPKMS+F+EW+DL+IVYKRYASL+F AI++ DNEL+ LE++HRYVE+LDKYFGSVCELDIIFNFEKAYF+LDEL++GGE+ ETSKK V+K I D QE+EI+ +AL+D Sbjct: 1 MMQFMLLFSRQGKLRLQKWYEAHPDKLKKKITRELISTILARKPKMSSFLEWRDLKIVYKRYASLYFCCAIEQQDNELLTLEVIHRYVELLDKYFGSVCELDIIFNFEKAYFMLDELMVGGEVCETSKKNVLKAIAAQDLLQEDEIVEMALRD 153
BLAST of ap-1 complex subunit sigma-1a vs. nr
Match: gi|909564936|ref|XP_013137751.1| (PREDICTED: AP-1 complex subunit sigma-1A isoform X2 [Papilio polytes] >gi|910312111|ref|XP_013167769.1| PREDICTED: AP-1 complex subunit sigma-1A isoform X2 [Papilio xuthus] >gi|943956422|ref|XP_014361072.1| PREDICTED: AP-1 complex subunit sigma-2 isoform X2 [Papilio machaon]) HSP 1 Score: 234.187 bits (596), Expect = 6.816e-76 Identity = 109/153 (71.24%), Postives = 133/153 (86.93%), Query Frame = 0 Query: 22 MIHFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQEEEIIGLALKD 174 M+ F++LFSRQGK+RLQKWY A P++ KKKITREL TTVLARKPKM +F+EWKD+++VYKRYASL+F A+++ DNEL+ LEL+HRYVE+LDKYFGSVCELDIIFNFEKAYFILDEL++GGELQETSKK V+K I D QE+E + AL+D Sbjct: 1 MMQFMLLFSRQGKLRLQKWYVAHPDKLKKKITRELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELVLGGELQETSKKNVLKAIAAQDLLQEDETVDAALRD 153
BLAST of ap-1 complex subunit sigma-1a vs. nr
Match: gi|393809285|gb|AFN25813.1| (adaptor protein complex-1 sigma subunit transcript b [Bombyx mori]) HSP 1 Score: 233.802 bits (595), Expect = 9.890e-76 Identity = 110/156 (70.51%), Postives = 134/156 (85.90%), Query Frame = 0 Query: 22 MIHFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQEEEIIGLALKD-GW 176 M+ F++LFSRQGK+RLQKWY A P++ KKKITREL TTVLARKPKM +F+EWKD+++VYKRYASL+F A+++ DNEL+ LEL+HRYVE+LDKY GSVCELDIIFNFEKAYFILDEL++GGELQETSKK V+K I D QE+E + AL+D GW Sbjct: 1 MMQFMLLFSRQGKLRLQKWYVAHPDKLKKKITRELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYLGSVCELDIIFNFEKAYFILDELVLGGELQETSKKNVLKAIAAQDLLQEDETVDAALRDVGW 156
BLAST of ap-1 complex subunit sigma-1a vs. nr
Match: gi|985390767|ref|XP_015380060.1| (PREDICTED: AP-1 complex subunit sigma-2 isoform X2 [Diuraphis noxia] >gi|1229881693|ref|XP_022160941.1| AP-1 complex subunit sigma-2 isoform X2 [Myzus persicae]) HSP 1 Score: 233.032 bits (593), Expect = 1.532e-75 Identity = 110/153 (71.90%), Postives = 134/153 (87.58%), Query Frame = 0 Query: 22 MIHFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQEEEIIGLALKD 174 M+HF++LFSRQGK+RLQKWY A P++ KKKITREL TT+LARKPKM +F+EWK+L+IVYKRYASL+F AI++ DNEL+ LE++HRYVE+LDKYFGSVCELDIIFNFEKAYFILDEL++GGE+QETSKK V+K I D QEEE + ALK+ Sbjct: 1 MMHFMLLFSRQGKLRLQKWYVAHPDKVKKKITRELITTILARKPKMCSFLEWKELKIVYKRYASLYFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELLLGGEIQETSKKNVLKAISAQDLLQEEEAVEGALKE 153
BLAST of ap-1 complex subunit sigma-1a vs. nr
Match: gi|1229723317|ref|XP_022124275.1| (AP-1 complex subunit sigma-2 isoform X2 [Pieris rapae]) HSP 1 Score: 233.032 bits (593), Expect = 1.971e-75 Identity = 109/153 (71.24%), Postives = 133/153 (86.93%), Query Frame = 0 Query: 22 MIHFIILFSRQGKIRLQKWYEARPEREKKKITRELTTTVLARKPKMSNFIEWKDLQIVYKRYASLFFLFAIDKTDNELIALELVHRYVEVLDKYFGSVCELDIIFNFEKAYFILDELIIGGELQETSKKGVIKQIEFADNFQEEEIIGLALKD 174 M+ F++LFSRQGK+RLQKWY A P++ KKKITREL TTVLARKPKM +F+EWKD+++VYKRYASL+F A+++ DNEL+ LEL+HRYVE+LDKYFGSVCELDIIFNFEKAYFILDEL++GGELQETSKK V+K I D QE+E + AL+D Sbjct: 1 MMQFMLLFSRQGKLRLQKWYVAHPDKLKKKITRELITTVLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELVLGGELQETSKKNVLKAIAAQDLLQEDETVDEALRD 153 The following BLAST results are available for this feature:
BLAST of ap-1 complex subunit sigma-1a vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 5
BLAST of ap-1 complex subunit sigma-1a vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of ap-1 complex subunit sigma-1a vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold754_size102093:22203..59972+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold754_size102093-snap-gene-0.10 ID=maker-scaffold754_size102093-snap-gene-0.10|Name=ap-1 complex subunit sigma-1a|organism=Tigriopus kingsejongensis|type=gene|length=37770bp|location=Sequence derived from alignment at scaffold754_size102093:22203..59972+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'ap-1 complex subunit sigma-1a' has the following synonyms
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