exosome complex exonuclease rrp45, maker-scaffold769_size100554-snap-gene-0.15 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of exosome complex exonuclease rrp45 vs. L. salmonis genes
Match: EMLSAG00000008750 (supercontig:LSalAtl2s:LSalAtl2s543:201996:206114:1 gene:EMLSAG00000008750 transcript:EMLSAT00000008750 description:"maker-LSalAtl2s543-augustus-gene-1.61") HSP 1 Score: 76.6406 bits (187), Expect = 3.870e-15 Identity = 73/282 (25.89%), Postives = 120/282 (42.55%), Query Frame = 0 Query: 36 KQFILDALSESRRLDGR--SLQDRRPLSLH---FGREEGSALVCVGVEHDDRTSMVFAQASASLTEPAVSRPNEGVLSIYVNYCASAAPRFCESAGVPGGGDEVVEVTRLLERCLKESRCLDLESLCVVAEEKVWQIRLDVSVLSAAAGGVADAASVAALAALAHFKRPDVTL----QGDKVTIHPVSERDPVGLAIHHYPVLSTLAFFQRQKSPKSAEKLVCVDPTWQEEQIMDGKIVFGVNPYREICTLHLAGQLLIDKSVVLRYAHVASQHAKSVVDLI 308 K++ + + RLDGR L PLS +GS+++ G ++V + + P PN G + +V+ PR +S G DE+ +++ + L+ S ++L++LC+V E W +++D S L+ G V DA A + AL K P V DK I V + L + PV T+A + K + VDPT +EE I ++ E+C G I ++ + ++A Q A +V LI Sbjct: 695 KEYFNQHVDKGLRLDGREGGLDSLXPLSXSXXSIXTADGSSIIKKG------NTIVICGITLQIATPTEEHPNRGFIVPHVDLPTMCNPRNYKSRG--QISDEIQVLSKFVMDVLENSGVINLDTLCIVPGEYAWVLKIDFSCLN-HDGNVKDAIITALILALKEVKMPKVETFEEEDSDKTLIKVVKNKYS-QLQLQCIPVSVTMAIMEGDK--------ILVDPTEEEESFAPDSITLVLDAEDEMCYFAKLGGNPISDELLDKITNLARQQALTVRKLI 958
BLAST of exosome complex exonuclease rrp45 vs. SwissProt
Match: gi|122140086|sp|Q3SWZ4.1|EXOS9_BOVIN (RecName: Full=Exosome complex component RRP45; AltName: Full=Exosome component 9) HSP 1 Score: 235.728 bits (600), Expect = 4.928e-72 Identity = 133/314 (42.36%), Postives = 194/314 (61.78%), Query Frame = 0 Query: 26 MKETPLSNLEKQFILDALSESRRLDGRSLQDRRPLSLHFGREEGSALVCVGVEHDDRTSMVFAQASASLTEPAVSRPNEGVLSIYVNYCASAAPRFCESAGVPG-GGDEVVEVTRLLERCLKESRCLDLESLCVVAEEKVWQIRLDVSVLSAAAGGVADAASVAALAALAHFKRPDVTLQGDKVTIHPVSERDPVGLAIHHYPVLSTLAFFQRQKSPKSAEKLVCVDPTWQEEQIMDGKIVFGVNPYREICTLHLAGQLLIDKSVVLRYAHVASQHAKSVVDLIKNKLHEDTEKRQMGAWDEIGLAHAFAKQNI 338 MKETPLSN E++F+L A+ E +RLDGR D R + + FG + G +V +G + V Q S L P ++R EG+L + AAP F PG D +V++ RLLERCL+ S+C+D ESLCVVA EKVWQIR+D+ +L+ G + DAAS+AA+ AL HF+RPDV++QGD+VT++ + ERDPV L+IHH P+ + AFFQ+ + VDP+ +EE++MDG +V +N +REICT+ +G +++ K VLR + +A + +LI+ L D + R+ G + G + A Q I Sbjct: 1 MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIKISFGTDYGCCIVELG------KTRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAF-----EPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHD-GNIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTLEERDPVPLSIHHMPICVSFAFFQQG-------TYLLVDPSEREERVMDGLLVIAMNKHREICTIQSSGGIMLLKDQVLRCSKIAGVKVVEITELIQKALENDQKVRKEGG--KFGFVESMANQRI 293
BLAST of exosome complex exonuclease rrp45 vs. SwissProt
Match: gi|147744559|sp|Q06265.3|EXOS9_HUMAN (RecName: Full=Exosome complex component RRP45; AltName: Full=Autoantigen PM/Scl 1; AltName: Full=Exosome component 9; AltName: Full=P75 polymyositis-scleroderma overlap syndrome-associated autoantigen; AltName: Full=Polymyositis/scleroderma autoantigen 1; AltName: Full=Polymyositis/scleroderma autoantigen 75 kDa; Short=PM/Scl-75) HSP 1 Score: 233.032 bits (593), Expect = 4.189e-71 Identity = 133/314 (42.36%), Postives = 192/314 (61.15%), Query Frame = 0 Query: 26 MKETPLSNLEKQFILDALSESRRLDGRSLQDRRPLSLHFGREEGSALVCVGVEHDDRTSMVFAQASASLTEPAVSRPNEGVLSIYVNYCASAAPRFCESAGVPG-GGDEVVEVTRLLERCLKESRCLDLESLCVVAEEKVWQIRLDVSVLSAAAGGVADAASVAALAALAHFKRPDVTLQGDKVTIHPVSERDPVGLAIHHYPVLSTLAFFQRQKSPKSAEKLVCVDPTWQEEQIMDGKIVFGVNPYREICTLHLAGQLLIDKSVVLRYAHVASQHAKSVVDLIKNKLHEDTEKRQMGAWDEIGLAHAFAKQNI 338 MKETPLSN E++F+L A+ E +RLDGR D R + + FG + G +V +G + V Q S L P ++R EG+L + AAP F PG D +V++ RL+ERCL+ S+C+D ESLCVVA EKVWQIR+D+ +L+ G + DAAS+AA+ AL HF+RPDV++QGD+VT++ ERDPV L+IHH P+ + AFFQ+ + VDP +EE++MDG +V +N +REICT+ +G +++ K VLR + +A + +LI L D + R+ G + G A + A Q I Sbjct: 1 MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELG------KTRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAF-----EPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHD-GNIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQG-------TYLLVDPNEREERVMDGLLVIAMNKHREICTIQSSGGIMLLKDQVLRCSKIAGVKVAEITELILKALENDQKVRKEGG--KFGFAESIANQRI 293
BLAST of exosome complex exonuclease rrp45 vs. SwissProt
Match: gi|81918190|sp|Q4QR75.1|EXOS9_RAT (RecName: Full=Exosome complex component RRP45; AltName: Full=Exosome component 9) HSP 1 Score: 231.876 bits (590), Expect = 1.095e-70 Identity = 132/314 (42.04%), Postives = 191/314 (60.83%), Query Frame = 0 Query: 26 MKETPLSNLEKQFILDALSESRRLDGRSLQDRRPLSLHFGREEGSALVCVGVEHDDRTSMVFAQASASLTEPAVSRPNEGVLSIYVNYCASAAPRFCESAGVPG-GGDEVVEVTRLLERCLKESRCLDLESLCVVAEEKVWQIRLDVSVLSAAAGGVADAASVAALAALAHFKRPDVTLQGDKVTIHPVSERDPVGLAIHHYPVLSTLAFFQRQKSPKSAEKLVCVDPTWQEEQIMDGKIVFGVNPYREICTLHLAGQLLIDKSVVLRYAHVASQHAKSVVDLIKNKLHEDTEKRQMGAWDEIGLAHAFAKQNI 338 MKETPLSN E++F+L A+ E +RLDGR D R + + FG + G +V +G + V Q S L P ++R EG+L + AAP F PG D +V++ RLLERCL+ S+C+D ESLCVVA EKVWQIR+D+ +L+ G + DAAS+AA+ AL HF+RPDV++QG++VT++ ERDPV L+IHH P+ + AFFQ+ + VDP +EE++MDG +V +N +REICT+ +G +++ K V R + +A + +LI+ L D R+ G + G A + A Q I Sbjct: 1 MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELG------KTRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAF-----EPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHD-GNIIDAASIAAIVALCHFRRPDVSVQGEEVTLYTPEERDPVPLSIHHMPICVSFAFFQQG-------TYLLVDPNEREERVMDGLLVIAMNKHREICTIQSSGGIMLLKDQVFRCSKIAGVKVAEITELIQKALENDQRVRKEGG--KFGFAESIANQRI 293
BLAST of exosome complex exonuclease rrp45 vs. SwissProt
Match: gi|14285679|sp|Q9JHI7.1|EXOS9_MOUSE (RecName: Full=Exosome complex component RRP45; AltName: Full=Autoantigen PM/Scl 1; AltName: Full=Exosome component 9; AltName: Full=P75 polymyositis-scleroderma overlap syndrome-associated autoantigen; AltName: Full=Polymyositis/scleroderma autoantigen 1; AltName: Full=Polymyositis/scleroderma autoantigen 75 kDa; Short=PM/Scl-75) HSP 1 Score: 231.491 bits (589), Expect = 1.582e-70 Identity = 132/314 (42.04%), Postives = 191/314 (60.83%), Query Frame = 0 Query: 26 MKETPLSNLEKQFILDALSESRRLDGRSLQDRRPLSLHFGREEGSALVCVGVEHDDRTSMVFAQASASLTEPAVSRPNEGVLSIYVNYCASAAPRFCESAGVPG-GGDEVVEVTRLLERCLKESRCLDLESLCVVAEEKVWQIRLDVSVLSAAAGGVADAASVAALAALAHFKRPDVTLQGDKVTIHPVSERDPVGLAIHHYPVLSTLAFFQRQKSPKSAEKLVCVDPTWQEEQIMDGKIVFGVNPYREICTLHLAGQLLIDKSVVLRYAHVASQHAKSVVDLIKNKLHEDTEKRQMGAWDEIGLAHAFAKQNI 338 MKETPLSN E++F+L A+ E +RLDGR D R + + FG + G +V +G + V Q S L P ++R EG+L + AAP F PG D +V++ RLLERCL+ S+C+D ESLCVVA EKVWQIR+D+ +L+ G + DAAS+AA+ AL HF+RPDV++QG++VT++ ERDPV L+IHH P+ + AFFQ+ + VDP +EE++MDG +V +N +REICT+ +G +++ K V R + +A + +LI+ L D R+ G + G A + A Q I Sbjct: 1 MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELG------KTRVLGQVSCELVSPKLNRATEGILFFNLELSQMAAPAF-----EPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHD-GNIIDAASIAAIVALCHFRRPDVSVQGEEVTLYTPEERDPVPLSIHHMPICVSFAFFQQG-------TYLLVDPNEREERVMDGLLVIAMNKHREICTIQSSGGIMLLKDQVFRCSKIAGVKVAEITELIQKALENDQRVRKEGG--KFGFAESIANQRI 293
BLAST of exosome complex exonuclease rrp45 vs. SwissProt
Match: gi|21759396|sp|O74918.1|RRP45_SCHPO (RecName: Full=Exosome complex component rrp45; AltName: Full=Ribosomal RNA-processing protein 45) HSP 1 Score: 190.66 bits (483), Expect = 1.778e-56 Identity = 107/293 (36.52%), Postives = 168/293 (57.34%), Query Frame = 0 Query: 28 ETPLSNLEKQFILDALSESRRLDGRSLQDRRPLSLHFGREEGSALVCVGVEHDDRTSMVFAQASASLTEPAVSRPNEGVLSIYVNYCASAAPRFCESAGVPGGGDEVVEVTRLLERCLKESRCLDLESLCVVAEEKVWQIRLDVSVLSAAAGGVADAASVAALAALAHFKRPDVTLQGDKVTIHPVSERDPVGLAIHHYPVLSTLAFFQRQKSPKSAEKLVCVDPTWQEEQIMDGKIVFGVNPYREICTLHLAGQLLIDKSVVLRYAHVASQHAKSVVDLIKNKLHEDTEKRQ 320 ET L+N K+F+L++L + RLDGR L D R L + FG+E G V G + V A+ + +T+P RP +G+ SI A F E+ V D+ + ++RL+E+ ++ S LD ESLC+++ +K W +R V ++ G + DAA +A +AAL HF+RP++T+ G++VT+HPV ER PV L+I H P+ T +FF +L VD T +EE + +G + +N RE+C ++ AG ++ID S ++ A A A SV +I+ L ED K++ Sbjct: 6 ETSLNN--KEFVLNSLEKGLRLDGRQLSDFRSLEIQFGKEYGQVDVSFG------HTRVMARITTEITKPYTDRPFDGIFSITTELTPLAYSAF-EAGRV---SDQEIVISRLIEKAVRRSNALDTESLCIISGQKCWHVRASVHFINHD-GNLVDAACIAVIAALCHFRRPELTVVGEEVTVHPVEERVPVPLSILHMPICVTFSFFNNG-------ELAIVDATLEEEDLCNGSMTITLNKNREVCQIYKAGGIIIDPSKIISCAKTAFDIAVSVCSVIQQALDEDLRKKE 278
BLAST of exosome complex exonuclease rrp45 vs. SwissProt
Match: gi|14285753|sp|Q05636.1|RRP45_YEAST (RecName: Full=Exosome complex component RRP45; AltName: Full=Ribosomal RNA-processing protein 45) HSP 1 Score: 182.956 bits (463), Expect = 2.492e-53 Identity = 104/299 (34.78%), Postives = 164/299 (54.85%), Query Frame = 0 Query: 27 KETPLSNLEKQFILDALSESRRLDGRSLQDRRPLSLHFGREEGSALVCVGVEHDDRTSMVFAQASASLTEPAVSRPNEGVLSIYVNYCASAAPRFCESAGVPGGGDEVVEVTRLLERCLKESRCLDLESLCVVAEEKVWQIRLDVSVLSAAAGGVADAASVAALAALAHFKRPDVTLQGDKVTIHPVSERDPVGLAIHHYPVLSTLAFFQRQKSPKSAE-----KLVCVDPTWQEEQIMDGKIVFGVNPYREICTLHLAGQLLIDKSVVLRYAHVASQHAKSVVDLIKNKLHEDTEKRQ 320 K+ +S E +FIL+AL ++ RLDGRS R + + FG+E G V +G + V + S + +P RP EG+ I A +F G G DEV+ +R++E+ ++ S LD+E LC+VA K W +R DV L GG DA+ +A +A L HFK+PD+T+ G+++ +HPV+ER+PV L I H P+ T +FF Q + ++ + ++ +D T +EE + DG + +N RE+ + AG L +D +++ H A + + D I L ED+EKR Sbjct: 3 KDIEISASESKFILEALRQNYRLDGRSFDQFRDVEITFGKEFGDVSVKMG------NTKVHCRISCQIAQPYEDRPFEGLFVISTEISPMAGSQF--ENGNITGEDEVL-CSRIIEKSVRRSGALDVEGLCIVAGSKCWAVRADVHFLDCD-GGFIDASCIAVMAGLMHFKKPDITVHGEQIIVHPVNEREPVPLGILHIPICVTFSFFNPQDTEENIKGETNSEISIIDATLKEELLRDGVLTVTLNKNREVVQVSKAGGLPMDALTLMKCCHEAYSIIEKITDQILQLLKEDSEKRN 291
BLAST of exosome complex exonuclease rrp45 vs. SwissProt
Match: gi|75273151|sp|Q9LDM2.1|CER7L_ARATH (RecName: Full=Exosome complex component RRP45A; AltName: Full=Protein ECERIFERUM 7; AltName: Full=RRP45 homolog A; AltName: Full=Ribosomal RNA-processing protein 45A; Short=AtRRPA5a) HSP 1 Score: 180.644 bits (457), Expect = 2.153e-52 Identity = 114/308 (37.01%), Postives = 173/308 (56.17%), Query Frame = 0 Query: 35 EKQFILDALSESRRLDGRSLQDRRPLSLHFGREEGSALVCVGVEHDDRTSMVFAQASASLTEPAVSRPNEGVLSIYVNYCASAAPRFCESAGVPGGGDEVVEVTRLLERCLKESRCLDLESLCVVAEEKVWQIRLDVSVLSAAAGGVADAASVAALAALAHFKRPDVTLQGDK---VTIHPVSERDPVGLAIHHYPVLSTLAFFQRQKSPKSAEKLVCVDPTWQEEQIMDGKIVFGVNPYREICTLHLAGQLLIDKSVVLRYAHVASQHAKSVVDLIKNKLHEDTEKRQMGAWDEIGLAHAFAKQNIL 339 E +F+ AL R+DGR L D R L++ FG+E GS+ V +G H V A +A L +P RP+EG SI+ + A P F G PG + VE+ R+++R L+ESR +D ESLCV+A + VW +R+D+ +L G + DAA+VAALAAL F+RPD T+ GD V IHP ER+P+ L IHH P+ T FF + ++ +DPT+ EE +M G++ VN +IC + G+ +++SV+L +AS A + +I++ + +R + ++ H AK +L Sbjct: 15 ESKFVESALQSELRVDGRGLYDYRKLTIKFGKEYGSSQVQLGQTH------VMAFVTAQLVQPYKDRPSEGSFSIFTEFSPMADPSF--EPGHPG--ESAVELGRIIDRALRESRAVDTESLCVLAGKLVWSVRIDLHILD-NGGNLVDAANVAALAALMTFRRPDCTVGGDNSQDVIIHPPEEREPLPLIIHHLPIAFTFGFFNKG-------SILVMDPTYVEEAVMCGRMTVTVNANGDICAIQKPGEEGVNQSVILHCLRLASSRASATTKIIRDAVEAYNRER---SSQKVKRHHTLAKSEVL 301
BLAST of exosome complex exonuclease rrp45 vs. SwissProt
Match: gi|75182408|sp|Q9M209.1|CER7_ARATH (RecName: Full=Exosome complex component RRP45B; AltName: Full=Protein ECERIFERUM 7; AltName: Full=RNA-processing protein CER7; AltName: Full=RRP45 homolog B; AltName: Full=Ribosomal RNA-processing protein 45B) HSP 1 Score: 183.341 bits (464), Expect = 5.081e-52 Identity = 109/281 (38.79%), Postives = 164/281 (58.36%), Query Frame = 0 Query: 35 EKQFILDALSESRRLDGRSLQDRRPLSLHFGREEGSALVCVGVEHDDRTSMVFAQASASLTEPAVSRPNEGVLSIYVNYCASAAPRFCESAGVPGGGDEVVEVTRLLERCLKESRCLDLESLCVVAEEKVWQIRLDVSVLSAAAGGVADAASVAALAALAHFKRPDVTL---QGDKVTIHPVSERDPVGLAIHHYPVLSTLAFFQRQKSPKSAEKLVCVDPTWQEEQIMDGKIVFGVNPYREICTLHLAGQLLIDKSVVLRYAHVASQHAKSVVDLIKNKL 312 E +F+ AL R+DGR L D R L++ FG+E GS+ V +G H V +A L +P RPNEG LSI+ + A P F G PG + VE+ R+++R L+ESR +D ESLCV+A + VW +R+D+ +L G + DAA++AALAAL F+RPD T+ G +V IHP+ ER+P+ L IHH P+ T FF + +V +DPT+ EE +M G++ VN +IC + G+ +++SV+L +AS A + +I+ ++ Sbjct: 15 ESKFVETALQSELRVDGRGLYDYRKLTIKFGKEYGSSEVQLGQTH------VMGFVTAQLVQPYKDRPNEGSLSIFTEFSPMADPSF--EPGRPG--ESAVELGRIIDRGLRESRAVDTESLCVLAGKMVWSVRIDLHILD-NGGNLVDAANIAALAALMTFRRPDCTVGGENGQEVIIHPLEEREPLPLIIHHLPIAFTFGFFNKG-------NIVVMDPTYVEEAVMCGRMTVTVNANGDICAIQKPGEEGVNQSVILHCLRLASSRAAATTKIIREEV 277
BLAST of exosome complex exonuclease rrp45 vs. SwissProt
Match: gi|29336897|sp|Q975G9.1|RRP42_SULTO (RecName: Full=Exosome complex component Rrp42) HSP 1 Score: 115.161 bits (287), Expect = 3.685e-28 Identity = 87/239 (36.40%), Postives = 125/239 (52.30%), Query Frame = 0 Query: 32 SNLEKQFILDALSESRRLDGRSLQDRRPLS--LHFGRE-EGSALVCVGVEHDDRTSMVFAQASASLTEPAVSRPNEGVLSIYVNYCASAAPRFCESAGVPGGGDE-VVEVTRLLERCLKESRCLDLESLCVVAEEKVWQIRLDVSVLSAAAGGVADAASVAALAALAHFKRPDVTLQGDKVTIHPVSERDPVGLAIHHYPVLSTLAFFQRQKSPKSAEKLVCVDPTWQEEQIMDGKIVF 266 S L+K+ IL+AL RLDGR D RP+S L++ ++ EGSALV +G +MV A EP PN+G L + V A F PG DE +E+ R+++R L++S+ +DL L ++ +KVW +DV VL G V DA ++AA+AAL + K P V ++GD V I + D +A YPV++ + K + VDP+ EE I D KI F Sbjct: 12 SLLKKESILNALERGIRLDGRKNSDYRPISVTLNYAKKAEGSALVKLG------DTMVLAGVKLEEEEPFPDTPNQGNLVVNVELLPLAYETFE-----PGPPDENAIELARVVDRSLRDSKAVDLSKLVIIPGKKVWTAWVDVYVLD-YGGNVLDACTLAAVAALYNTKLPKVEIEGDNVKIIKEEKTDVTPIA---YPVVTV--------TVAKIGKYLVVDPSLDEESIADVKISF 227
BLAST of exosome complex exonuclease rrp45 vs. SwissProt
Match: gi|29336823|sp|Q8U0M0.1|RRP42_PYRFU (RecName: Full=Exosome complex component Rrp42) HSP 1 Score: 114.775 bits (286), Expect = 5.057e-28 Identity = 85/288 (29.51%), Postives = 140/288 (48.61%), Query Frame = 0 Query: 31 LSNLEKQFILDALSESRRLDGRSLQDRRPLSLHFG---REEGSALVCVGVEHDDRTSMVFAQASASLTEPAVSRPNEGVLSIYVNYCASAAPRFCESAGVPGGGDE-VVEVTRLLERCLKESRCLDLESLCVVAEEKVWQIRLDVSVLSAAAGGVADAASVAALAALAHFKRPDVTLQGDKVTIHPVSERDPVGLAIHHYPVLSTLAFFQRQKSPKSAEKLVCVDPTWQEEQIMDGKIVFGVNPYREICTLHLAGQLLIDKSVVLRYAHVASQHAKSVVDLIKNKLHE 314 ++ + + +IL+ L E +R+D R +D RP+ + G + EGSALV +G + V A+L EP PN GV++ V A+P F PG DE +E+ R+++R ++ESR L+LE + + + V + +DV VL G + DA + A+AAL + + P V + + + E++P L + P+ T A K LV VDPT +EEQIMDG++ + I + + V+ A + A+ + +I N L + Sbjct: 7 VAGIMRDYILNLLKEKKRIDDRGFEDYRPIEVEVGVIEKAEGSALVKLG------NTQVLVGIKATLGEPFPDTPNMGVMTTNVELVPLASPTFE-----PGPPDERAIELARVIDRGIRESRALNLEKMVIAPGKIVRVVFIDVHVLD-HDGNLMDAIGIGAIAALLNARVPKVLYNEETGEVEILEEKEP--LPVEKIPISVTFA--------KIGNYLV-VDPTLEEEQIMDGRLTITTDETGHISAVQKSEGGAFKLEEVMYAVETAFKKAEEIRKIILNALEK 271
BLAST of exosome complex exonuclease rrp45 vs. nr
Match: gi|225713980|gb|ACO12836.1| (Exosome complex exonuclease RRP45 [Lepeophtheirus salmonis]) HSP 1 Score: 284.648 bits (727), Expect = 1.476e-89 Identity = 148/290 (51.03%), Postives = 196/290 (67.59%), Query Frame = 0 Query: 32 SNLEKQFILDALSESRRLDGRSLQDRRPLSLHFGREEGSALVCVGVEHDDRTSMVFAQASASLTEPAVSRPNEGVLSIYVNYCASAAPRFCESAGVPGGGDEVVEVTRLLERCLKESRCLDLESLCVVAEEKVWQIRLDVSVLSAAAGGVADAASVAALAALAHFKRPDVTLQGDKVTIHPVSERDPVGLAIHHYPVLSTLAFFQRQKSPKSAEKLVCVDPTWQEEQIMDGKIVFGVNPYREICTLHLAGQLLIDKSVVLRYAHVASQHAKSVVDLIKNKLHEDTEKRQM 321 SN E FIL ALSE +RLDGR L +RR L++HFGRE G+ V +G + V A S S+ EP SRPNEGVL I + A + + +VE+ R++ER LK+S+CLD+ESLC+ +EEKVW I L++++L+ A G AD ASVA LAAL HFKRPDVTL+GDK+ IHP ERDPV LA+HH+PVLST A + R + DP+ EE +MDGK+V G+NPYREIC LHLAGQ L+DK +VL+ A A+++AK++V+ +KN+L D + R+M Sbjct: 4 SNAEHSFILSALSEGKRLDGRKLDERRDLTIHFGREWGTTEVKLG------ETRVLASTSCSVGEPQSSRPNEGVLKIRMEPLAKRSM----------TTEALVELNRVIERVLKQSKCLDMESLCISSEEKVWIISLEMTILNDA-GNAADCASVAGLAALCHFKRPDVTLKGDKIRIHPFYERDPVSLAVHHHPVLSTFALYGR---------VALSDPSRDEEVVMDGKVVLGMNPYREICALHLAGQKLVDKRLVLQLASKAAEYAKNIVNKLKNELKLDEKARKM 267
BLAST of exosome complex exonuclease rrp45 vs. nr
Match: gi|225718348|gb|ACO15020.1| (Exosome complex exonuclease RRP45 [Caligus clemensi]) HSP 1 Score: 280.026 bits (715), Expect = 9.339e-88 Identity = 167/378 (44.18%), Postives = 236/378 (62.43%), Query Frame = 0 Query: 32 SNLEKQFILDALSESRRLDGRSLQDRRPLSLHFGREEGSALVCVGVEHDDRTSMVFAQASASLTEPAVSRPNEGVLSIYVNYCASAAPRFCESAGVPGGGDEVVEVTRLLERCLKESRCLDLESLCVVAEEKVWQIRLDVSVLSAAAGGVADAASVAALAALAHFKRPDVTLQGDKVTIHPVSERDPVGLAIHHYPVLSTLAFFQRQKSPKSAEKLVCVDPTWQEEQIMDGKIVFGVNPYREICTLHLAGQLLIDKSVVLRYAHVASQHAKSVVDLIKNKLHEDTEKRQMGAWDEIGLAHAFAKQ-NILQTAKAAQRVSRV----PGPDPPRIPEALPSTKMSIYESHGVVDLVKSAPEAKAAQPATSTLPTSDDSEE 404 SN E+ FIL AL E +RLDGR + +RR + +H GRE G+A V +G D R V A S S+ EP RPNEG+L ++ + + + +VE+ R++ER LKES+C+D+ESLC+ +EEKVW I L++++LS A G AD AS+A LAAL HFKRPDVTL+GDK+ IHP RDPV LAIHH+PVLST A + R + +DP+ +EE +MDGK+V G+NPYREIC LHLAGQ L+DK++VL+ A A++ AK++V+ +KN L D + R+ A ++ LA+A ++ ++L AK V +P + E LP+T +I S GV++L+ P AQ + + T D+ EE Sbjct: 4 SNAERSFILAALREGKRLDGRKVDERRDICIHLGREWGTAEVSLG---DTR---VLASTSCSVGEPRSVRPNEGILKTHIEPLSKRSMTT----------EALVELNRVIERVLKESKCVDMESLCISSEEKVWIISLEMTLLSDA-GNAADCASIAGLAALCHFKRPDVTLKGDKIRIHPFYGRDPVPLAIHHHPVLSTFALYGR---------VSLLDPSREEEAVMDGKVVPGMNPYREICALHLAGQKLVDKALVLQLASKAAEEAKNIVNQLKNILLRDAQSRK--AKEDPCLANALREEASLLTHAKKDHESLDVRKWASSKEPKALSEGLPATIENI--SEGVLELI---PNDSGAQ--DNNMETDDEEEE 346
BLAST of exosome complex exonuclease rrp45 vs. nr
Match: gi|225710860|gb|ACO11276.1| (Exosome complex exonuclease RRP45 [Caligus rogercresseyi]) HSP 1 Score: 278.1 bits (710), Expect = 6.842e-87 Identity = 143/289 (49.48%), Postives = 195/289 (67.47%), Query Frame = 0 Query: 32 SNLEKQFILDALSESRRLDGRSLQDRRPLSLHFGREEGSALVCVGVEHDDRTSMVFAQASASLTEPAVSRPNEGVLSIYVNYCASAAPRFCESAGVPGGGDEVVEVTRLLERCLKESRCLDLESLCVVAEEKVWQIRLDVSVLSAAAGGVADAASVAALAALAHFKRPDVTLQGDKVTIHPVSERDPVGLAIHHYPVLSTLAFFQRQKSPKSAEKLVCVDPTWQEEQIMDGKIVFGVNPYREICTLHLAGQLLIDKSVVLRYAHVASQHAKSVVDLIKNKLHEDTEKRQ 320 SN E+ FIL AL E +RLDGR L +RR +++H GRE G+A V +G D R V A S S+ EP RPNEG+L ++ + + + +VE+ R++ER LKES+C+D+ESLC+ +EEKVW I L++++L+ A G AD AS+A LAAL HFKRPDVTL+GDK+ IHP ERDPV LAIHH+PVLST A + R + +DP+ +EE +MDGK+V G+NPYREIC LHLAGQ L+DK++VL+ A A++ +K +VD +KN L D+ R+ Sbjct: 4 SNAERSFILAALQEGKRLDGRKLDERRDINIHLGREWGTAEVRLG---DTR---VLASTSCSVGEPRSVRPNEGILKTHIEPLSKRSI----------STETLVELNRVIERVLKESKCVDMESLCISSEEKVWIISLEMTLLNDA-GNAADCASIAGLAALCHFKRPDVTLKGDKIRIHPFYERDPVSLAIHHHPVLSTFALYGR---------VALLDPSKEEEIVMDGKVVLGMNPYREICALHLAGQKLVDKTLVLQLASKAAEESKRIVDQLKNALSRDSSARK 266
BLAST of exosome complex exonuclease rrp45 vs. nr
Match: gi|871237565|ref|XP_012938872.1| (PREDICTED: exosome complex component RRP45-like [Aplysia californica]) HSP 1 Score: 272.322 bits (695), Expect = 3.904e-84 Identity = 142/311 (45.66%), Postives = 201/311 (64.63%), Query Frame = 0 Query: 26 MKETPLSNLEKQFILDALSESRRLDGRSLQDRRPLSLHFGREEGSALVCVGVEHDDRTSMVFAQASASLTEPAVSRPNEGVLSIYVNYCASAAPRFCESAGVPGGGDEVVEVTRLLERCLKESRCLDLESLCVVAEEKVWQIRLDVSVLSAAAGGVADAASVAALAALAHFKRPDVTLQGDKVTIHPVSERDPVGLAIHHYPVLSTLAFFQRQKSPKSAEKLVCVDPTWQEEQIMDGKIVFGVNPYREICTLHLAGQLLIDKSVVLRYAHVASQHAKSVVDLIKNKLHEDTEKRQMGAWDEIGLAHAFAKQ 336 M+ETPLSN EK+FIL+ + E RRLDGR+ D R + + FG G V +G + V AQ S + +P +RP++GVL + V A+P F G P +E VE++RL+ERCLKESRC+DLESLC+V+ EKVW +R+D+ VL+ G + D +S+AA++ALAHFKRPDV++QG+++TIHP+ E+DPVGL+IHH P+L + +FF + K + VDP+ +EE++MDGK+V G+N +REICTL + GQ L+ K VLR + +A +LI L D + R G H FA+Q Sbjct: 1 MRETPLSNCEKEFILNNIKEHRRLDGRNAYDYRDIRISFGVSLGCCHVEMG------KTKVLAQVSCEVGQPKQTRPHDGVLFVNVELSPMASPAF--EQGRPS--EESVELSRLMERCLKESRCVDLESLCIVSGEKVWHVRVDIHVLNHE-GNILDCSSIAAISALAHFKRPDVSVQGEEITIHPLEEKDPVGLSIHHMPLLVSFSFFLQG-------KYLLVDPSEKEEKVMDGKMVIGMNKHREICTLQVTGQNLLLKDQVLRCSSIAVTKVTKTTELIVQALENDKQARLRGE------KHGFAEQ 287
BLAST of exosome complex exonuclease rrp45 vs. nr
Match: gi|676435263|ref|XP_009047500.1| (hypothetical protein LOTGIDRAFT_172374 [Lottia gigantea] >gi|556113168|gb|ESP01820.1| hypothetical protein LOTGIDRAFT_172374 [Lottia gigantea]) HSP 1 Score: 266.159 bits (679), Expect = 2.840e-82 Identity = 142/313 (45.37%), Postives = 198/313 (63.26%), Query Frame = 0 Query: 26 MKETPLSNLEKQFILDALSESRRLDGRSLQDRRPLSLHFGREEGSALVCVGVEHDDRTSMVFAQASASLTEPAVSRPNEGVLSIYVNYCASAAPRFCESAGVPGGGDEVVEVTRLLERCLKESRCLDLESLCVVAEEKVWQIRLDVSVLSAAAGGVADAASVAALAALAHFKRPDVTLQGDKVTIHPVSERDPVGLAIHHYPVLSTLAFFQRQKSPKSAEKLVCVDPTWQEEQIMDGKIVFGVNPYREICTLHLAGQLLIDKSVVLRYAHVASQHAKSVVDLIKNKLHEDTEKRQMGAWDEIGLAHAFAKQNI 338 M+ETPLSN EK+FIL A+++ +RLDGR D R L + FG + G V +G + V Q S +TEP +RP +G+L I V A+P F AG DE VE+TRLLERC+KESRCLD ESLCVVA +KVWQIR+D+ VL+ G + D AS+AA+ AL HF+RPDVT+ G+ VTIH + +RDP+ L++HH P+ + AF+ + K + VDP +EE++MDGK+V G+N +REICTL + G +L+ K VLR +++A + + +LI L D +KR + G A + K+ I Sbjct: 1 MRETPLSNCEKEFILSAIADRKRLDGRQTFDYRKLKICFGVDTGCCSVELG------QTRVLTQVSCEVTEPKQTRPTDGILYINVELSPMASPSF--EAGRLS--DEGVELTRLLERCIKESRCLDTESLCVVAGQKVWQIRVDIHVLNHE-GNILDCASIAAITALVHFRRPDVTVSGEDVTIHALEDRDPIPLSVHHMPICVSFAFYDQG-------KYLLVDPKLREEKVMDGKMVIGMNKHREICTLQITGDMLLLKEQVLRCSNIAVVKVQEITELI--LLAVDNDKRARKEGKKFGFAESIEKEKI 293
BLAST of exosome complex exonuclease rrp45 vs. nr
Match: gi|1139839944|ref|XP_019918074.1| (PREDICTED: exosome complex component RRP45-like isoform X2 [Crassostrea gigas]) HSP 1 Score: 262.692 bits (670), Expect = 4.270e-80 Identity = 136/323 (42.11%), Postives = 202/323 (62.54%), Query Frame = 0 Query: 26 MKETPLSNLEKQFILDALSESRRLDGRSLQDRRPLSLHFGREEGSALVCVGVEHDDRTSMVFAQASASLTEPAVSRPNEGVLSIYVNYCASAAPRFCESAGVPGGGDEVVEVTRLLERCLKESRCLDLESLCVVAEEKVWQIRLDVSVLSAAAGGVADAASVAALAALAHFKRPDVTLQGDKVTIHPVSERDPVGLAIHHYPVLSTLAFFQRQKSPKSAEKLVCVDPTWQEEQIMDGKIVFGVNPYREICTLHLAGQLLIDKSVVLRYAHVASQHAKSVVDLIKNKLHEDTEKRQMGAWDEIGLAHAFAKQNILQTAKAAQRV 348 M++TPLS EK FI+ AL + +RLDGR D R + + FG + G V +G + V AQ S +T P RP++GVL I V A+P F V D VE+ RLLERCL+ESRCLD ESLC+++ EKVWQIR+DV+V++ G + D +S+AA+AALAHF+RPDVT+ G +V +HP E+DP+ L++HH P+ T +F+++ K + VDPT +EE++MDGK+V G+N +REICTL ++G++L+ K VLR +++A + +LI+ L D + R G + G A + ++IL + + + Sbjct: 1 MRDTPLSACEKNFIIKALGDRKRLDGRQPYDYRKVKITFGADRGCCKVNLG------QTQVLAQVSCEITSPRAVRPSDGVLFINVELSPMASPAF----EVGRMSDLGVEINRLLERCLRESRCLDTESLCIISGEKVWQIRVDVNVMNHD-GNIIDCSSMAAIAALAHFRRPDVTVDGSEVIVHPSDEKDPIPLSVHHMPICVTFSFYEQG-------KYLLVDPTDKEEKVMDGKMVIGMNKHREICTLQVSGEMLLMKDQVLRCSNIAVVKVTEITELIQRALENDRQARLNGK--KFGFAESEPTESILTNQQEPEEI 303
BLAST of exosome complex exonuclease rrp45 vs. nr
Match: gi|1242766007|ref|XP_022322306.1| (exosome complex component RRP45-like isoform X1 [Crassostrea virginica]) HSP 1 Score: 261.536 bits (667), Expect = 1.088e-79 Identity = 135/314 (42.99%), Postives = 198/314 (63.06%), Query Frame = 0 Query: 26 MKETPLSNLEKQFILDALSESRRLDGRSLQDRRPLSLHFGREEGSALVCVGVEHDDRTSMVFAQASASLTEPAVSRPNEGVLSIYVNYCASAAPRFCESAGVPGGGDEVVEVTRLLERCLKESRCLDLESLCVVAEEKVWQIRLDVSVLSAAAGGVADAASVAALAALAHFKRPDVTLQGDKVTIHPVSERDPVGLAIHHYPVLSTLAFFQRQKSPKSAEKLVCVDPTWQEEQIMDGKIVFGVNPYREICTLHLAGQLLIDKSVVLRYAHVASQHAKSVVDLIKNKLHEDTEKRQMGAWDEIGLAHAFAKQNIL 339 MK+TPLS E+ FI+ AL + +RLDGR D R + + FG + G V +G ++V AQ S + P RP++G+L I V A+P F V D VE+ RLLERCL+ESRCLD ESLC+++ EKVWQIR+DV+V++ G + D SVAA+AALAHF+RPDVT+ G +V +HP E+DP+ L++HH P+ T +F+++ K + VDPT +EE++MDGK++ G+N +REICTL ++G++L+ K VLR +++A V +LI+ L D + R G + G A + ++IL Sbjct: 1 MKDTPLSVCERNFIIKALGDKKRLDGRQPYDYRKIRIQFGADRGCCKVSLG------QTLVLAQVSCEIISPRAVRPSDGILFINVELSPMASPAF----EVGRMSDLGVEINRLLERCLRESRCLDTESLCIISGEKVWQIRVDVNVMNHD-GNIIDCCSVAAIAALAHFRRPDVTVDGSEVIVHPSDEKDPIPLSVHHMPICVTFSFYEQG-------KYLLVDPTDKEEKVMDGKMIIGMNKHREICTLQVSGEMLLMKDQVLRCSNIAVVKVTEVTELIQRALENDRQARLSGQ--KFGFAESEFTESIL 294
BLAST of exosome complex exonuclease rrp45 vs. nr
Match: gi|1242765279|ref|XP_022321921.1| (exosome complex component RRP45-like isoform X2 [Crassostrea virginica]) HSP 1 Score: 261.536 bits (667), Expect = 1.088e-79 Identity = 136/314 (43.31%), Postives = 198/314 (63.06%), Query Frame = 0 Query: 26 MKETPLSNLEKQFILDALSESRRLDGRSLQDRRPLSLHFGREEGSALVCVGVEHDDRTSMVFAQASASLTEPAVSRPNEGVLSIYVNYCASAAPRFCESAGVPGGGDEVVEVTRLLERCLKESRCLDLESLCVVAEEKVWQIRLDVSVLSAAAGGVADAASVAALAALAHFKRPDVTLQGDKVTIHPVSERDPVGLAIHHYPVLSTLAFFQRQKSPKSAEKLVCVDPTWQEEQIMDGKIVFGVNPYREICTLHLAGQLLIDKSVVLRYAHVASQHAKSVVDLIKNKLHEDTEKRQMGAWDEIGLAHAFAKQNIL 339 MK+TPLS E+ FI+ AL + +RLDGR D R + + FG + G V +G ++V AQ S + P RP++G+L I V A+P F V D VE+ RLLERCL+ESRCLD ESLC+++ EKVWQIR+DV+V++ G + D SVAA+AALAHF+RPDVT+ G +V +HP E+DP+ L++HH P+ T +F+++ K + VDPT +EE++MDGK+V G+N +REICTL ++G++L+ K VLR +++A V +LI+ L D + R G + G A + ++IL Sbjct: 1 MKDTPLSVCERNFIIKALGDKKRLDGRQPYDYRKIRIQFGADRGCCKVSLG------QTLVLAQVSCEIISPRAVRPSDGILFINVELSPMASPAF----EVGRMSDLGVEINRLLERCLRESRCLDTESLCIISGEKVWQIRVDVNVMNHD-GNIIDCCSVAAIAALAHFRRPDVTVDGSEVIVHPSDEKDPIPLSVHHMPICVTFSFYEQG-------KYLLVDPTDKEEKVMDGKMVIGMNKHREICTLQVSGEMLLMKDQVLRCSNIAVVKVTEVTELIQRALENDRQARLSGQ--KFGFAESEFTESIL 294
BLAST of exosome complex exonuclease rrp45 vs. nr
Match: gi|1207926039|ref|XP_021352134.1| (exosome complex component RRP45-like [Mizuhopecten yessoensis]) HSP 1 Score: 260.766 bits (665), Expect = 2.661e-79 Identity = 135/313 (43.13%), Postives = 195/313 (62.30%), Query Frame = 0 Query: 26 MKETPLSNLEKQFILDALSESRRLDGRSLQDRRPLSLHFGREEGSALVCVGVEHDDRTSMVFAQASASLTEPAVSRPNEGVLSIYVNYCASAAPRFCESAGVPGGGDEVVEVTRLLERCLKESRCLDLESLCVVAEEKVWQIRLDVSVLSAAAGGVADAASVAALAALAHFKRPDVTLQGDKVTIHPVSERDPVGLAIHHYPVLSTLAFFQRQKSPKSAEKLVCVDPTWQEEQIMDGKIVFGVNPYREICTLHLAGQLLIDKSVVLRYAHVASQHAKSVVDLIKNKLHEDTEKRQMGAWDEIGLAHAFAKQNI 338 M++TPLSN E++FI A+ + +R+DGR D R + + FG + GS V +G + VFAQ S L P +RP++GVL I V A P F ES + G VE+ RLLERCLKESRC+D+ESLC+++ EKVWQ+R D+ VL+ G + D AS+AA+ AL HF+RPDVT+ G V +HPV E+DP+ L++HH P+ + +F+++ K + VDP+ +EE++MDGK+V G+N +REICTL + GQ+L+ K VLR +++A DLI L D + R G ++ G + A I Sbjct: 1 MRDTPLSNCEREFIRQAVIQKKRIDGRQPFDYRRIRIKFGTDRGSCYVELG------QTRVFAQVSCELCAPKPTRPSDGVLFINVELSPMACPSF-ESGRMSELG---VEINRLLERCLKESRCVDMESLCIISGEKVWQVRTDIHVLNHD-GNIIDCASIAAITALTHFRRPDVTVDGSNVIVHPVEEKDPIPLSVHHMPICVSFSFYEQG-------KFLLVDPSDKEEKVMDGKMVIGMNKHREICTLQVTGQMLLLKDQVLRCSNIAVVKVAETTDLIHKALDNDRQARAKG--EKFGYTDSVAMDTI 293
BLAST of exosome complex exonuclease rrp45 vs. nr
Match: gi|443726519|gb|ELU13639.1| (hypothetical protein CAPTEDRAFT_176766 [Capitella teleta]) HSP 1 Score: 256.144 bits (653), Expect = 8.807e-79 Identity = 133/299 (44.48%), Postives = 187/299 (62.54%), Query Frame = 0 Query: 26 MKETPLSNLEKQFILDALSESRRLDGRSLQDRRPLSLHFGREEGSALVCVGVEHDDRTSMVFAQASASLTEPAVSRPNEGVLSIYVNYCASAAPRFCESAGVPGG--GDEVVEVTRLLERCLKESRCLDLESLCVVAEEKVWQIRLDVSVLSAAAGGVADAASVAALAALAHFKRPDVTLQGDKVTIHPVSERDPVGLAIHHYPVLSTLAFFQRQKSPKSAEKLVCVDPTWQEEQIMDGKIVFGVNPYREICTLHLAGQLLIDKSVVLRYAHVASQHAKSVVDLIKNKLHEDTEKRQMG 322 M++ P SN E+ FI+ A+ + RLDGR + D R + L FG + G + +G S+V Q S +T P +RP+EG+L + V A+P F PGG D VE+ RLLERCLKESRC+D ESLC++A KVW IR+D VL+ G + D S +A+AALAHF+RPDV++ G++VTIH + ERDP+ L+IHH P+ T AFF S K + VDP+ +EE++MDGK+V G+N +REICTL ++G +LI K VLR +++A + +LI+ L D+ R G Sbjct: 1 MRDIPFSNCERDFIIQAIEQRSRLDGRGVYDYRKMQLTFGEDRGCCQMELG------NSIVMTQVSCEVTPPKQTRPSEGILFVNVELSPMASPTF-----EPGGRMSDFGVELNRLLERCLKESRCVDTESLCIMAGLKVWTIRVDCHVLNYD-GNLVDCCSASAIAALAHFRRPDVSVSGEEVTIHTLDERDPIPLSIHHMPLCVTFAFF-------SQGKYLLVDPSLKEEKVMDGKMVIGMNKHREICTLQMSGNMLIMKDQVLRCSNIAVVKVTEITELIQKSLQADSLARSKG 280 The following BLAST results are available for this feature:
BLAST of exosome complex exonuclease rrp45 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of exosome complex exonuclease rrp45 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of exosome complex exonuclease rrp45 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold769_size100554:773..2172+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold769_size100554-snap-gene-0.15 ID=maker-scaffold769_size100554-snap-gene-0.15|Name=exosome complex exonuclease rrp45|organism=Tigriopus kingsejongensis|type=gene|length=1400bp|location=Sequence derived from alignment at scaffold769_size100554:773..2172+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'exosome complex exonuclease rrp45' has the following synonyms
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