sortilin-related receptor isoform x2, maker-scaffold781_size98004-snap-gene-0.20 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of sortilin-related receptor isoform x2 vs. L. salmonis genes
Match: EMLSAG00000007936 (supercontig:LSalAtl2s:LSalAtl2s469:287745:294486:-1 gene:EMLSAG00000007936 transcript:EMLSAT00000007936 description:"augustus_masked-LSalAtl2s469-processed-gene-3.13") HSP 1 Score: 90.1225 bits (222), Expect = 5.748e-19 Identity = 60/172 (34.88%), Postives = 78/172 (45.35%), Query Frame = 0 Query: 404 IPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKE---VEETHIPP-----PPPPPQPNLPPPEENLDQAAAE--AC---DFQCRNGACQPMKNRCDGKNDCPEGIDEENC----------IP-YQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 + C G F+C N QC++ CD CRDGSDE+ C +E + E P N E+ LD+ E C F+C + C CDG+ DC + DE NC IP +Q CT +F C NG KCI +CDG +DC D SDE +C Sbjct: 1139 LECAEGHFKCKNDQCIKSEYRCDFDEDCRDGSDEEDCKMREKCMINEFKCSSSSKCFPISWQCDNFADCEDGLDEKNCEEKTCKEWQFKCNDQTCIYKDWVCDGQLDCADNSDEFNCSSTSTSMEHQIPSFQHNNCTEDKFKCANG-KCIPINWKCDGHNDCPDQSDEMNCG 1309 HSP 2 Score: 86.2705 bits (212), Expect = 9.000e-18 Identity = 52/161 (32.30%), Postives = 77/161 (47.83%), Query Frame = 0 Query: 404 IPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPP---PPQPNLPPPEENLDQAAAEAC---------DFQCRNGA-CQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 + C +F+CGNG+C+ CD C D +DEQ C E E H + E+ D + E C +F+C + + C P+ +CD DC +G+DE+NC + C +F C N + CI CDG+ DC D+SDEF+C+ Sbjct: 1100 VTCTNYQFKCGNGKCIPHGWRCDDEDDCYDNTDEQGCDSLECAEGHFKCKNDQCIKSEYRCDFDEDCRDGSDEEDCKMREKCMINEFKCSSSSKCFPISWQCDNFADCEDGLDEKNC---EEKTCKEWQFKC-NDQTCIYKDWVCDGQLDCADNSDEFNCS 1256 HSP 3 Score: 83.9593 bits (206), Expect = 4.895e-17 Identity = 55/164 (33.54%), Postives = 72/164 (43.90%), Query Frame = 0 Query: 388 TWLQKQIMSTQAPTMVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 T ++ QI S Q C +F+C NG+C+ N CDG C D SDE C H P+P E N F+C++G CDG NDCP+G DE + + + C E C +CI K C+GR DC D+SDE C Sbjct: 1260 TSMEHQIPSFQHNN----CTEDKFKCANGKCIPINWKCDGHNDCPDQSDEMNCGFNH-HYIHNGSTTFYPEPKKKYIELN---------KFECKSGKKIWQAWICDGYNDCPDGSDENHSLCQEKMRCKPHESRCEFSGECINLDKICNGRKDCVDESDEKGCG 1409 HSP 4 Score: 82.4185 bits (202), Expect = 1.721e-16 Identity = 50/145 (34.48%), Postives = 65/145 (44.83%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 C G F+C N C+ N CD C DGSDE C + V T+ F+C NG C P RCD ++DC + DE+ C EC F C+N ++CI+ RCD +DC+D SDE DC Sbjct: 1063 CGEGMFRCVNKLCIPLNWRCDDKNDCGDGSDELNC--RNVTCTNY--------------------------QFKCGNGKCIPHGWRCDDEDDCYDNTDEQGC---DSLECAEGHFKCKN-DQCIKSEYRCDFDEDCRDGSDEEDC 1175 HSP 5 Score: 75.8702 bits (185), Expect = 1.742e-14 Identity = 41/97 (42.27%), Postives = 52/97 (53.61%), Query Frame = 0 Query: 464 PEEN-------LDQAAAEACD---FQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 P+EN +D + C F+C N C P+ RCD KNDC +G DE NC + CT +F C NG KCI + RCD DDC D++DE C Sbjct: 1044 PDENPASGSICMDNSTHSTCGEGMFRCVNKLCIPLNWRCDDKNDCGDGSDELNC---RNVTCTNYQFKCGNG-KCIPHGWRCDDEDDCYDNTDEQGC 1136 HSP 6 Score: 65.4698 bits (158), Expect = 2.465e-11 Identity = 43/152 (28.29%), Postives = 68/152 (44.74%), Query Frame = 0 Query: 408 MGEFQCGNGQCLQENLICDGVYQCRDGSDEQ--MCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENC-----IPYQPAE--CTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 + +F+C +G+ + + ICDG C DGSDE +C K + H C+F +G C + C+G+ DC + DE+ C I P+ C F+C N +KC+ + C+G +C+D SDE +C Sbjct: 1333 LNKFECKSGKKIWQAWICDGYNDCPDGSDENHSLCQEKMRCKPH-----------------------ESRCEF---SGECINLDKICNGRKDCVDESDEKGCGHDHNIFPMPSSILCDPIHFSCDNNQKCLSHSFICNGIRECEDGSDEDNC 1458
BLAST of sortilin-related receptor isoform x2 vs. L. salmonis genes
Match: EMLSAG00000002033 (supercontig:LSalAtl2s:LSalAtl2s136:1281404:1312976:1 gene:EMLSAG00000002033 transcript:EMLSAT00000002033 description:"maker-LSalAtl2s136-augustus-gene-13.17") HSP 1 Score: 78.5666 bits (192), Expect = 2.483e-15 Identity = 59/165 (35.76%), Postives = 76/165 (46.06%), Query Frame = 0 Query: 399 APTMVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETH--------IPPPPPPPQPN-LPPPEENLDQAAAEAC---DFQC-RNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 APT C+ +FQCGNG+C+ + CDG C D SDE+ C E IP N + D A + C F C +G C P CDG NDC + DEE C P C+ ++F C N ++CI +CDG DC+D SDE C Sbjct: 2169 APT----CSENDFQCGNGRCIPKGYFCDGDKDCDDFSDERGCQNVTCESNQFSCTNGRCIPMTWKCDGENDCGDSSDEGDFCAEKTCAYFQFSCASSGHCIPQSWVCDGDNDCFDNADEEGC---PPITCSASQFKCNNQKQCIHESYKCDGIPDCEDASDELGC 2326 HSP 2 Score: 75.485 bits (184), Expect = 2.546e-14 Identity = 54/159 (33.96%), Postives = 71/159 (44.65%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMC--APKEVEETHIPPPPP--PPQPNLPPPEENLDQAAAEACD--------FQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGE-----KCIEYLKRCDGRDDCQDDSDE 547 C + CGNG C+ CDG + CRD SDE+ C ++EE EE D + + C+ F+C+N C P + RCDG DC +G DE NC C +F C G+ KCI+ K CDG DC D +DE Sbjct: 1241 CQKDDHHCGNGFCVPNEKKCDGYHNCRDKSDEEDCPGTSCDLEEFRCASGEKCIAQYQKCNHREECEDGSDEKDCNFPPCHSGQFRCQNHLCIPARWRCDGYRDCTDGTDEFNCTAIA---CPENKFNCPKGDSDLSPKCIDKSKLCDGHADCDDGADE 1396 HSP 3 Score: 73.1738 bits (178), Expect = 1.283e-13 Identity = 55/152 (36.18%), Postives = 73/152 (48.03%), Query Frame = 0 Query: 406 CNMGEFQC---GNGQCLQENLICDGVYQCRDGSDE--QMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCI-PYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 C G +C N +C+ E L CDG CRDGSDE + C P + E+TH F+C+N C P CD +NDC + DE+ I Q +C+ +EF C NG KCI+ +CD +DC D+SDE DC Sbjct: 4801 CTAGWKKCPGHANYRCIPEFLYCDGKDDCRDGSDELDENCVPCD-EKTH----------------------------FKCKNRRCIPKTWLCDFENDCGDKSDEKEKICDGQYRDCSESEFKCGNG-KCIQSRWKCDNENDCGDNSDEADCG 4922 HSP 4 Score: 72.0182 bits (175), Expect = 3.032e-13 Identity = 47/147 (31.97%), Postives = 67/147 (45.58%), Query Frame = 0 Query: 405 PCNMGEFQCG-NGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 CN +F+CG +G C+ E CD C G DE C + ++ D C NG C P + +CDG ++C + DEE+C C EF C +GEKCI ++C+ R++C+D SDE DC Sbjct: 1200 KCNNDQFECGTSGNCIPERWKCDYHRDCDGGEDEYDCQYRVCQKD----------------------------DHHCGNGFCVPNEKKCDGYHNCRDKSDEEDC---PGTSCDLEEFRCASGEKCIAQYQKCNHREECEDGSDEKDC 1315 HSP 5 Score: 70.8626 bits (172), Expect = 7.220e-13 Identity = 51/141 (36.17%), Postives = 62/141 (43.97%), Query Frame = 0 Query: 410 EFQCGNGQCLQENLICDGVYQCRDGSDE-QMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFD 549 +F C N +C+ + +CDG C D SDE Q C P EN DFQC NG C P CDG DC + DE C Q C +F+C NG +CI +CDG +DC D SDE D Sbjct: 2136 DFTCDNQRCIPKTWVCDGDDDCLDNSDENQNCTA-------------------PTCSEN---------DFQCGNGRCIPKGYFCDGDKDCDDFSDERGC---QNVTCESNQFSCTNG-RCIPMTWKCDGENDCGDSSDEGD 2244 HSP 6 Score: 68.5514 bits (166), Expect = 3.215e-12 Identity = 54/168 (32.14%), Postives = 73/168 (43.45%), Query Frame = 0 Query: 411 FQCGNGQCLQENLICDGVYQCRDGSDE---QMCAPKEV---EETHIPPPPPPPQPNLPP--------------PEENLDQA-------AAEACDFQCRNGACQPMKNRCDGKNDCPEGIDE-ENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 F C NG C+ + +CDG C D SDE + C+ + EE + P +E+L+ A +F+C G C +K +CD NDC +G DE + C + TEF C+N KCI RCD DDC D+SDEF C Sbjct: 4025 FTCDNGNCIPKIYVCDGDNDCNDNSDESPERECSKRTCDTEEEFECKKNIAWNRSGCIPKRYVCDGEADCVDGADESLEHANCTRPKRECSDTEFRCDTGKCINLKWKCDHANDCDDGSDEPKECKDHYRTCNPETEFTCQNS-KCINQNYRCDDEDDCGDNSDEFHC 4191 HSP 7 Score: 67.781 bits (164), Expect = 5.243e-12 Identity = 56/169 (33.14%), Postives = 67/169 (39.64%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAP-------------------------KEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDE--ENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C+ EF+CGNG+C+Q CD C D SDE C K+ + P N PEE F+C+N C +RCDGK DC +G DE E C + E R F C N KCI CDG D C D SDE Sbjct: 4887 CSESEFKCGNGKCIQSRWKCDNENDCGDNSDEADCGTWVCPADTFQCKSGHCIKLSDQCNGEKDCLDFSDELDCSPRFNNSYCPEEK----------FECKNHLCVNQNDRCDGKQDCGDGTDEDPEECKSFVCDEAHR--FKCINN-KCIPRYNVCDGIDQCGDGSDE 5042 HSP 8 Score: 67.781 bits (164), Expect = 6.723e-12 Identity = 51/146 (34.93%), Postives = 63/146 (43.15%), Query Frame = 0 Query: 406 CNMGEFQCGNG----QCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C + QCG G +C+ CDG C DGSDE PP P E FQC++ C + CDG NDC EG DEE C +EC +F C++ KCI +CDG +DC D SDE Sbjct: 4636 CRKNQHQCGPGGKDDRCIPHYEKCDGKTDCEDGSDE-----------------PPSCPERFCGENK----------FQCKDNQCLLLTTLCDGHNDCTEGEDEELC----DSECPDNQFKCKSTGKCIIDSWKCDGDNDCPDGSDE 4750 HSP 9 Score: 67.0106 bits (162), Expect = 1.134e-11 Identity = 45/142 (31.69%), Postives = 63/142 (44.37%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C+ EF+C G+C+ CD C DGSDE PKE ++ + P +F C+N C RCD ++DC + DE +C A C F C+ ++CI Y K CD DC D++DE Sbjct: 4114 CSDTEFRCDTGKCINLKWKCDHANDCDDGSDE----PKECKDHYRTCNPET--------------------EFTCQNSKCINQNYRCDDEDDCGDNSDEFHCDKASIA-CPEGHFKCQRSKECIPYEKVCDKVSDCTDNTDE 4230 HSP 10 Score: 65.4698 bits (158), Expect = 3.455e-11 Identity = 58/178 (32.58%), Postives = 73/178 (41.01%), Query Frame = 0 Query: 396 STQAPTMVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNL-------------------PPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRT----EFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 S +A C FQC +G C++ + C+G C D SDE C+P+ ++ P + +L PEE EA F+C N C P N CDG + C +G DE N E TR F C NG CI K CD DDC D SDE C Sbjct: 4916 SDEADCGTWVCPADTFQCKSGHCIKLSDQCNGEKDCLDFSDELDCSPR-FNNSYCPEEKFECKNHLCVNQNDRCDGKQDCGDGTDEDPEECKSFVCDEAHRFKCINNKCIPRYNVCDGIDQCGDGSDENN---ITRCESTRRFCPFMFTCSNG-NCISKSKICDLHDDCGDLSDERGC 5088 HSP 11 Score: 63.929 bits (154), Expect = 8.492e-11 Identity = 50/158 (31.65%), Postives = 63/158 (39.87%), Query Frame = 0 Query: 404 IPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDE-QMCAPKEVEETHIPPPPPP---PQPNLPPPEEN-LDQAAAEAC--------DFQCRN-GACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 + C +F C NG+C+ CDG C D SDE CA K PQ + + + D A E C F+C N C +CDG DC + DE C P +C +F C+ CI CDG DC D SDE Sbjct: 2209 VTCESNQFSCTNGRCIPMTWKCDGENDCGDSSDEGDFCAEKTCAYFQFSCASSGHCIPQSWVCDGDNDCFDNADEEGCPPITCSASQFKCNNQKQCIHESYKCDGIPDCEDASDELGCPSIAPDQCADQQFKCKTSGICIPIRWHCDGTSDCGDGSDE 2366 HSP 12 Score: 56.9954 bits (136), Expect = 1.329e-8 Identity = 51/187 (27.27%), Postives = 68/187 (36.36%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRN-GACQPMKNRCDGKNDCPEGIDE-------------------ENCIPY---------QPAECTRTEFACRNGE--------------KCIEYLKRCDGRDDCQDDSDEFD 549 C +FQC + QCL +CDG C +G DE++C + P Q F+C++ G C +CDG NDCP+G DE + CIP + F CRN +CI CDG+DDC+D SDE D Sbjct: 4680 CGENKFQCKDNQCLLLTTLCDGHNDCTEGEDEELCDSE----------CPDNQ-------------------FKCKSTGKCIIDSWKCDGDNDCPDGSDENKEMCENQECKDDEFQCNNKRCIPLLWKCDFDDDCGDDSDEVAFLCRNRNCTAGWKKCPGHANYRCIPEFLYCDGKDDCRDGSDELD 4837 HSP 13 Score: 55.8398 bits (133), Expect = 2.500e-8 Identity = 55/188 (29.26%), Postives = 72/188 (38.30%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCA-PKEVEET---------HIPPPPPPPQPNLPPPEENLDQA--------------------------------AAEAC---DFQCRNGACQPMKNRCDGKNDCPEGIDE-ENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C EF+CGNG+C+ E CD C D SDE+ C PK E ++ + N+DQ AA C F+C + C P CDG+ DC +G DE E+ + C F C NG CI + CDG +DC D+SDE Sbjct: 3865 CKPSEFRCGNGRCIFETWRCDHEDDCGDRSDEEECDYPKCAEGNKQMIVKILQYLMKTSNYDKDKKKDISCNVDQLICNSTTICVQHYWLCDGDDDCGDNSDESPVHCAARTCPPNTFRCPDQRCIPATWYCDGEKDCEDGSDEPEDACNAEDRTCFGDLFTCDNG-NCIPKIYVCDGDNDCNDNSDE 4051
BLAST of sortilin-related receptor isoform x2 vs. L. salmonis genes
Match: EMLSAG00000002785 (supercontig:LSalAtl2s:LSalAtl2s160:520470:523461:1 gene:EMLSAG00000002785 transcript:EMLSAT00000002785 description:"augustus_masked-LSalAtl2s160-processed-gene-4.3") HSP 1 Score: 77.0258 bits (188), Expect = 2.832e-15 Identity = 55/146 (37.67%), Postives = 68/146 (46.58%), Query Frame = 0 Query: 409 GEFQC-GNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEAC-DFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKR---CDGRDDCQDDSDEFD 549 EFQC G+G CL + L C+G+Y CRDGSDE +C + E+ E C + QC NG C P +C K DCPE DE +C CT EF +CI R CDG +DC D SDEF+ Sbjct: 21 NEFQCIGHGDCLPKQLRCNGIYDCRDGSDELLCDKEGFEK--------------------------ETCQELQCPNGQCIPSDRKCARKIDCPESYDELDC-HSTSLHCTDNEFYFVKDARCIASSFRCDVCDGVEDCPDLSDEFN 139
BLAST of sortilin-related receptor isoform x2 vs. L. salmonis genes
Match: EMLSAG00000011642 (supercontig:LSalAtl2s:LSalAtl2s80:264857:278656:-1 gene:EMLSAG00000011642 transcript:EMLSAT00000011642 description:"maker-LSalAtl2s80-augustus-gene-2.9") HSP 1 Score: 73.9442 bits (180), Expect = 5.684e-14 Identity = 48/147 (32.65%), Postives = 67/147 (45.58%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEE-NCIPYQPAECTRT-EFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 C EF+C + C+ +CDG++ C G DE+ C + P NL P + C P+ CDG+ DC +G DE C EC R +FAC +G++C E L+ CDG +C+D SDE DC Sbjct: 1569 CWSDEFRCLDATCINSRFVCDGIWDCSGGEDERSCDKSSCSSSSEFTCKPR---NLHFPH---------------KESICIPLHKYCDGEKDCVDGSDESFGC------ECHRIGKFACSSGDECTERLRVCDGTINCKDGSDEHDC 1691 HSP 2 Score: 73.559 bits (179), Expect = 7.556e-14 Identity = 49/142 (34.51%), Postives = 63/142 (44.37%), Query Frame = 0 Query: 411 FQCGNGQCLQE--NLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 ++C +G C+ + ++ CD + C DGSDE+ C+ PP FQC NG C RCDGK DC + DE C P C +F CR KCIE + CD + DC D SDE DC Sbjct: 1456 YRCDDGTCINKKWDVRCDFIQDCIDGSDERNCSCN-----------PPKH-------------------FQCTNGYCLESWKRCDGKADCNDMSDEAGC----PG-CLANQFQCRKSGKCIELSRTCDRKLDCPDGSDEHDC 1562 HSP 3 Score: 55.8398 bits (133), Expect = 2.797e-8 Identity = 34/77 (44.16%), Postives = 40/77 (51.95%), Query Frame = 0 Query: 476 CDFQCRNGACQPMK--NRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 C ++C +G C K RCD DC +G DE NC P F C NG C+E KRCDG+ DC D SDE C Sbjct: 1454 CAYRCDDGTCINKKWDVRCDFIQDCIDGSDERNCSCNPPK-----HFQCTNG-YCLESWKRCDGKADCNDMSDEAGC 1524
BLAST of sortilin-related receptor isoform x2 vs. L. salmonis genes
Match: EMLSAG00000003726 (supercontig:LSalAtl2s:LSalAtl2s1:3575139:3647958:-1 gene:EMLSAG00000003726 transcript:EMLSAT00000003726 description:"maker-LSalAtl2s1-augustus-gene-36.30") HSP 1 Score: 73.559 bits (179), Expect = 8.161e-14 Identity = 51/162 (31.48%), Postives = 70/162 (43.21%), Query Frame = 0 Query: 393 QIMSTQAPTMVI---PCN-MGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 QI + T+ + CN + EF+C +G+CL + C+ V C G DE C + F C +G C KN CDGK DC DE++CI Y + C +F C C+ K+CDG DC+D+SDE DC Sbjct: 376 QIFRSNDVTVTVNMQSCNGVFEFKCKSGRCLNISKKCNYVRDCLHGDDEFECGSI--------------------------SNCSTKTSFLCLDGTCISEKNICDGKPDCFSREDEKDCIKY-ISRCEYHQFMCLGNLNCVPLSKKCDGFIDCEDESDERDC 510 HSP 2 Score: 52.7582 bits (125), Expect = 2.346e-7 Identity = 70/333 (21.02%), Postives = 119/333 (35.74%), Query Frame = 0 Query: 227 QSGFYCQDGSVIGMDRVCNGMPDCMYGDDEAGCGTNIVEFQPPP------VQTIPMQQEQTPLVIVLTASNYEMTIRAHPRIVVKFFSTKCPKCQEFMPVYNQAVETAKSMNLGITFAKVDCDIEPLLKERFGVDTYPKILYYDASFPMGMPRQYYKSYGLTANGLLTWLQKQIMSTQAPTMVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQP--AECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 ++ F C DG+ I +C+G PDC +DE C I + + +P+ ++ + S+ + P I ++ + TK V+ E + + + D + + ++ + + + Y+ + N ++ TQ + C E C NGQC+ ++ +CDG C DGSDE +PN +++C N C +K +D +EN P + C E+ C + E+CI CDG DCQD SDE C Sbjct: 436 KTSFLCLDGTCISEKNICDGKPDCFSREDEKDCIKYISRCEYHQFMCLGNLNCVPLSKKCDGFIDCEDESDERDCLSHDPHIKIRLYPTKQTVISGQEVVFQCRDEGRHRLPVVWNKLRDDGSFDRVSSNNGRLEIFETSIRHAGV--------YFCEVDMFTNVSSISATLNVIETQVQSQKFDCQRDEATCSNGQCIPKDNVCDGRRDCFDGSDESS-----------CGGGGGCEPN----------------EYRCDNKRC-ILKTWVCDSDDDCGDGSDENYCAVNPPGSPCKFKEWMCHSKEQCIPKSFHCDGEIDCQDTSDEIGCT 732
BLAST of sortilin-related receptor isoform x2 vs. L. salmonis genes
Match: EMLSAG00000011270 (supercontig:LSalAtl2s:LSalAtl2s772:2760:23028:-1 gene:EMLSAG00000011270 transcript:EMLSAT00000011270 description:"maker-LSalAtl2s772-snap-gene-0.12") HSP 1 Score: 71.2478 bits (173), Expect = 5.596e-13 Identity = 48/156 (30.77%), Postives = 73/156 (46.79%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDE----QMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEAC--------DFQCRNGACQPMKNRCDGKNDCPEGIDE--ENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C++ + C NG C++E+ +CDG + C+D SDE Q+C P+E PP P + + +D + C F C + C + CDG+ C +G DE E C + C + C N +C+ + CDG DC D+SDE Sbjct: 3546 CSLHQVPCSNGNCIEESELCDGNFDCQDRSDELYCSQVCNPEEEFRCASPPTCIPKEWRCDGDRDCVDGSDENRCPQSHCRVGHFSCGSSECISSQWLCDGEAXCVDGSDEDDEACSRHL---CEPNRYRCDNRHQCVLWTSVCDGIPDCSDESDE 3698 HSP 2 Score: 63.929 bits (154), Expect = 9.133e-11 Identity = 47/145 (32.41%), Postives = 63/145 (43.45%), Query Frame = 0 Query: 410 EFQC-GNGQCLQENLICDGVYQCRDGSDEQM--CAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTE-FACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 EFQC N C+ L CDG+ C DGSDE + CA + + I C NG C P ++C+G +DC + DE C C + F C G C+E ++CDG DC+D SDE +C Sbjct: 2552 EFQCSANDVCILYTLTCDGLNHCPDGSDEDLKYCAIRHCKSGFI----------------------------HCTNGRCIPESSKCNGIDDCGDFSDETGCF------CPENKPFVCSIGGPCLEEHRKCDGVPDCEDTSDEINC 2662 HSP 3 Score: 63.5438 bits (153), Expect = 1.265e-10 Identity = 52/156 (33.33%), Postives = 70/156 (44.87%), Query Frame = 0 Query: 406 CNMGEFQC-GNGQCLQENLICDGVYQCRDGSDEQMCAP--KEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRN---------GACQPMKNRCDGKNDCPEGIDEENCIPYQP--AECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C +G FQC G+ +C+ E+ +CD C+D SDEQ C KE + P + + DQ+ C +C + G C P CDG +DCP+ DE C Y C +F C NG C++ CD DDC D SDE Sbjct: 2726 CPLGTFQCLGDNRCISESWVCDRDKDCKDESDEQNCHYYCKEHQFKCNNGQCIPKKWYCDRTPDCSDQSDEMDCKVECHSDSEFRCNSTGVCIPKLWVCDGNSDCPKNEDETGCPIYLAPLGNCHPNQFRCFNG-ICVDNSYYCDYNDDCLDGSDE 2880 HSP 4 Score: 61.6178 bits (148), Expect = 4.337e-10 Identity = 47/140 (33.57%), Postives = 63/140 (45.00%), Query Frame = 0 Query: 416 GQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENC-----IPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 G CL+E+ CDGV C D SDE C P N+ +E+ + E C + AC + RCDGKNDC + DE+NC + + C F C +CI CD DC+D+SDE +C Sbjct: 2638 GPCLEEHRKCDGVPDCEDTSDEINC-----------PKVNCAASNISSFDES--KILLENCAY---TTACILPEWRCDGKNDCWDNSDEKNCDNSSIVGSESDHCPLGTFQCLGDNRCISESWVCDRDKDCKDESDEQNC 2761 HSP 5 Score: 61.2326 bits (147), Expect = 6.374e-10 Identity = 56/173 (32.37%), Postives = 75/173 (43.35%), Query Frame = 0 Query: 391 QKQIMSTQAPTMVIPCNMGEFQCGNG-QCLQENLICDGVYQCRDGSDEQM------CAPKEVEETH----IPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDE--ENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 Q +++ T C+ +F C N +C+ CDG C DG DE + C E + + +P P PN EE F+C NG C P +CDG DC G DE + C C + F C+N + CI RCD +DDC D+SDE DC Sbjct: 3380 QSHVLNEDGLTCKSNCSKTDFVCENTLKCIPFWWKCDGQDDCGDGLDEPLDCPPFKCHAGEFQCNNGNCVLPIHEPINCPNRTCSEEL----------FKCPNGRCIPKVWKCDGDPDCELGEDESSDECSVDLITHCEGS-FICKN-KHCINERWRCDQQDDCGDNSDEIDC 3540 HSP 6 Score: 61.2326 bits (147), Expect = 6.653e-10 Identity = 50/161 (31.06%), Postives = 74/161 (45.96%), Query Frame = 0 Query: 404 IPCNMGEFQCGNGQC---LQENLIC------DGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEEN----LDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 C+ GEFQC NG C + E + C + +++C +G C PK + P L E + +D F C+N C + RCD ++DC + DE +C+ ++ C+ + C NG CIE + CDG DCQD SDE C+ Sbjct: 3434 FKCHAGEFQCNNGNCVLPIHEPINCPNRTCSEELFKCPNGR----CIPK------VWKCDGDPDCELGEDESSDECSVDLITHCEGSFICKNKHCINERWRCDQQDDCGDNSDEIDCMDFK--NCSLHQVPCSNG-NCIEESELCDGNFDCQDRSDELYCS 3581 HSP 7 Score: 55.8398 bits (133), Expect = 2.786e-8 Identity = 48/168 (28.57%), Postives = 71/168 (42.26%), Query Frame = 0 Query: 389 WLQKQIMSTQAPTMVIP---CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGA-CQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDC--QDDSDEFDC 550 +L+ +S +A +P C +F C NG C+ NL CDG C DGSDE + + N+ ++N F C N A C +++ CD +DC +G DE+ + C F C+ C+ Y C+ DC D SDE +C Sbjct: 891 FLKDDKVSCEAIEGWVPPPYCAKDQFTCSNGHCIDLNLKCDGEIDCEDGSDENLLIACQ---------------NITCDKDN---------QFMCANKASCIELESICDRYDDCMDGSDEDPGLCLSRT-CGDDMFQCKETGICLHYFSMCNSVYDCGGNDISDEGNC 1033 HSP 8 Score: 54.299 bits (129), Expect = 8.169e-8 Identity = 43/135 (31.85%), Postives = 56/135 (41.48%), Query Frame = 0 Query: 415 NGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQC-RNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAEC-TRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 + +C+ + CDG C DGSDE C+ L +F C R+G C N CDG C +G DE N + ++C T+ C NGE CI CDG DC D+SDE Sbjct: 1096 DSKCINASKKCDGALDCDDGSDENYCS--------------------------LSSTKCGKEEFMCARSGDCIDKANVCDGVVHCSDGSDEHNNVFCGLSDCDLSTQRKCANGE-CILKGYWCDGHLDCTDNSDE 1203
BLAST of sortilin-related receptor isoform x2 vs. L. salmonis genes
Match: EMLSAG00000011173 (supercontig:LSalAtl2s:LSalAtl2s760:102949:107319:-1 gene:EMLSAG00000011173 transcript:EMLSAT00000011173 description:"maker-LSalAtl2s760-snap-gene-1.19") HSP 1 Score: 67.3958 bits (163), Expect = 6.733e-12 Identity = 45/146 (30.82%), Postives = 63/146 (43.15%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQC-RNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 C+ F CGNG+C+ CDG+ +C + DE C P++ E +FQC ++ C P CDG DC +G DE C Q +C + + C + C+ L +CDG DC D SDE C Sbjct: 968 CSDSLFHCGNGECIPHRWKCDGIAECSNKMDESDC------------------PSV---------VTCEGTNFQCIKSKDCVPKLWVCDGFKDCEDGSDEHQC---QKIDCGQHKTLCDDKSTCVLDLWKCDGYPDCLDGSDELRC 1083 HSP 2 Score: 53.1434 bits (126), Expect = 1.568e-7 Identity = 34/107 (31.78%), Postives = 46/107 (42.99%), Query Frame = 0 Query: 404 IPCNMGE-FQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDE--ENC 507 I C E F+C +G+C+ + +CDG + C D SDE V N + E DF C +G C P + CD +DC +G DE ENC Sbjct: 64 ITCTGDEWFKCHDGECITSSFVCDGQFDCTDRSDESQSCQSSV-------------------SLNNKHSHCEEGDFHCHDGLCIPSEWTCDKAHDCLDGSDEFVENC 151 HSP 3 Score: 51.6026 bits (122), Expect = 4.495e-7 Identity = 42/146 (28.77%), Postives = 64/146 (43.84%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDE--QMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACD-FQCRNGACQPMKNRCDGKNDCPEG-IDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C G+F C +G C+ CD + C DGSDE + CA ++ P +N + ++ C+ + C+NG C + CD + C E I E C P+ + F C++ +CI CDG DC + DE Sbjct: 115 CEEGDFHCHDGLCIPSEWTCDKAHDCLDGSDEFVENCAG-----SNRPIIGKNASKIENTDVQNRNVSSDTNCEGYLCKNGECILNRWVCD--DVCNEKTIAEIECDPF------KGHFYCKDSNECIIASNVCDGHVDCSNAYDE 247
BLAST of sortilin-related receptor isoform x2 vs. L. salmonis genes
Match: EMLSAG00000001502 (supercontig:LSalAtl2s:LSalAtl2s1258:70737:78110:1 gene:EMLSAG00000001502 transcript:EMLSAT00000001502 description:"maker-LSalAtl2s1258-snap-gene-0.30") HSP 1 Score: 65.855 bits (159), Expect = 1.659e-11 Identity = 45/159 (28.30%), Postives = 70/159 (44.03%), Query Frame = 0 Query: 410 EFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPK---------EVEETHIPPPPPPPQPNLPP----PEENLDQAAAEACD----FQCRN-GACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 EF C +G+C+ + L+CDG C D +DE C + + P +E++DQ C+ F+C + C + CDG DC +G DE +C+ C +F C C++ ++CDG +DC D SDE +C Sbjct: 85 EFACNDGKCIDKALLCDGTPHCHDSTDEISCKSSNNCDGDDEWKCLSGDVCIDKRKRCDGYPDCHDLSDEDIDQCPERDCNEEWQFKCWDRKRCIDSRRLCDGYTDCLDGSDEVDCLS---VVCQYWQFKCLLDGXCVDSRRKCDGYNDCNDGSDETNC 240
BLAST of sortilin-related receptor isoform x2 vs. L. salmonis genes
Match: EMLSAG00000009473 (supercontig:LSalAtl2s:LSalAtl2s60:645074:747260:1 gene:EMLSAG00000009473 transcript:EMLSAT00000009473 description:"maker-LSalAtl2s60-snap-gene-6.10") HSP 1 Score: 63.929 bits (154), Expect = 4.627e-11 Identity = 55/163 (33.74%), Postives = 76/163 (46.63%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPK------EVEETHIPPPPPPPQPN-----LPPPEENLDQAAAEACD-------FQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 C +F+C N QC+ ++ C+G+ C D SDE C K E I P Q + + +EN D + + CD F C N C + CD ++DC +G DE++C P EF+C +G CI+ RCDG DC D SDE DC Sbjct: 26 CLTTKFECDNKQCIPQSWRCNGLDDCMDNSDEVNCIVKSNCTDSEFRCDEIRCVPKNWQCDGGEDCIDGSDENEDICSNQTCDRTCISNEFTCDNSKCIQNRWVCDQEDDCGDGSDEKSC-PDMSCN-ADNEFSCGDG-YCIKKYWRCDGDVDCPDASDERDC 185 HSP 2 Score: 59.6918 bits (143), Expect = 1.074e-9 Identity = 47/153 (30.72%), Postives = 61/153 (39.87%), Query Frame = 0 Query: 405 PCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPA----------ECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C EF C N +C+Q +CD C DGSDE+ C P++ +N +F C +G C RCDG DCP+ DE +C + +C TEF C + CI CD DC D SDE Sbjct: 110 TCISNEFTCDNSKCIQNRWVCDQEDDCGDGSDEKSC------------------PDMSCNADN---------EFSCGDGYCIKKYWRCDGDVDCPDASDERDCPEISSSGNFSDENIIVKCKDTEFQCLSRNHCIHRTWLCDKDTDCPDGSDE 235
BLAST of sortilin-related receptor isoform x2 vs. L. salmonis genes
Match: EMLSAG00000004273 (supercontig:LSalAtl2s:LSalAtl2s224:244283:302537:1 gene:EMLSAG00000004273 transcript:EMLSAT00000004273 description:"maker-LSalAtl2s224-augustus-gene-3.16") HSP 1 Score: 62.003 bits (149), Expect = 3.067e-10 Identity = 43/144 (29.86%), Postives = 56/144 (38.89%), Query Frame = 0 Query: 406 CNMGEFQCGNG--QCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C +F C +G C+ CDG +C D SDE C PE ++Q F+C+NG C N CD N C + DE NC C +F C ++CI C+ DC D SDE Sbjct: 1289 CQPDQFTCNSGTPSCIPFQWRCDGQPECSDHSDEMDC-----------------------PECGVNQ-------FRCQNGQCINGTNLCDKINHCSDNSDELNC-------CLGNQFQCVLSKECIPRNMTCNSFSDCSDGSDE 1395 HSP 2 Score: 58.9214 bits (141), Expect = 3.022e-9 Identity = 33/90 (36.67%), Postives = 46/90 (51.11%), Query Frame = 0 Query: 463 PPEENLDQAAAEACDFQCRNG--ACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 PP DQ F C +G +C P + RCDG+ +C + DE +C EC +F C+NG+ CI CD + C D+SDE +C Sbjct: 1286 PPXCQPDQ-------FTCNSGTPSCIPFQWRCDGQPECSDHSDEMDC-----PECGVNQFRCQNGQ-CINGTNLCDKINHCSDNSDELNC 1362
BLAST of sortilin-related receptor isoform x2 vs. SwissProt
Match: gi|8928392|sp|Q95209.1|SORL_RABIT (RecName: Full=Sortilin-related receptor; AltName: Full=Low-density lipoprotein receptor relative with 11 ligand-binding repeats; Short=LDLR relative with 11 ligand-binding repeats; Short=LR11; AltName: Full=SorLA-1; AltName: Full=Sorting protein-related receptor containing LDLR class A repeats; Short=SorLA; Flags: Precursor) HSP 1 Score: 95.9005 bits (237), Expect = 2.951e-19 Identity = 55/157 (35.03%), Postives = 74/157 (47.13%), Query Frame = 0 Query: 396 STQAPTMVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRN-GACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 +T AP+ +P ++CG G C+ + +CDG C DGSDE+ C P PN+ + +F+C C P RCDG DC +G DE NC + C EF C +GE CI +RCDG DC D+SDE C+ Sbjct: 1411 TTPAPSTCLP---NYYRCGGGACVIDTWVCDGYRDCADGSDEEAC---------------PSLPNVTATSSPSQPGRCDRFEFECHQPKKCIPNWRRCDGHQDCQDGQDEANCPTHSTLTCMSWEFKCEDGEACIVLSERCDGFLDCSDESDEKACS 1549 HSP 2 Score: 82.8037 bits (203), Expect = 3.666e-15 Identity = 53/147 (36.05%), Postives = 64/147 (43.54%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTR--TEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 C E+ C +G C++ + +CDG CRD SDE C EA +FQCRNG C P + CDG DC +G DE+ PA C + F C NG CI K CDG DC D SDE C Sbjct: 1157 CRSDEYNCSSGMCIRSSWVCDGDNDCRDWSDEANCTAI--------------------------YHTCEASNFQCRNGHCIPQRWACDGDADCQDGSDED------PANCEKKCNGFRCPNG-TCIPSTKHCDGLHDCSDGSDEQHC 1270 HSP 3 Score: 78.1814 bits (191), Expect = 1.090e-13 Identity = 49/143 (34.27%), Postives = 66/143 (46.15%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTR-TEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C FQC NG C+ + CDG C+DGSDE P E+ + F+C NG C P CDG +DC +G DE++C P CTR +F C+N ++C+ + CDG C+D SDE Sbjct: 1198 CEASNFQCRNGHCIPQRWACDGDADCQDGSDED---PANCEK--------------------------KCNGFRCPNGTCIPSTKHCDGLHDCSDGSDEQHCEPL----CTRFMDFVCKNRQQCLFHSMVCDGIIQCRDGSDE 1307 HSP 4 Score: 63.5438 bits (153), Expect = 3.596e-9 Identity = 47/156 (30.13%), Postives = 63/156 (40.38%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLP--------------PPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C +++C NG C+ CD C D SDE+ C P + + +P E + + + ++ C +G C CDG NDC + DE NC C + F CRNG CI CDG DCQD SDE Sbjct: 1077 CLRNQYRCSNGNCINSIWWCDFDNDCGDMSDEKNC-PTTICDLDTQFRCQESGTCIPLSYKCDLEDDCGDNSDERHCEMHQCRSDEYNCSSGMCIRSSWVCDGDNDCRDWSDEANCTAIYHT-CEASNFQCRNGH-CIPQRWACDGDADCQDGSDE 1229 HSP 5 Score: 62.3882 bits (150), Expect = 6.783e-9 Identity = 49/153 (32.03%), Postives = 64/153 (41.83%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENC-----IPYQ---PAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 C+ FQC NG C+ CDG+ C D SDE C P PN + F+C NG C P + +CD +NDC + DE++C +P P+ C + C G C+ CDG DC D SDE C Sbjct: 1324 CDEFGFQCQNGVCISLIWKCDGMDDCGDYSDEANC------------ENPTEAPN-----------CSRYFQFRCDNGHCIPNRWKCDRENDCGDWSDEKDCGDSHVLPSTTPAPSTCLPNYYRC-GGGACVIDTWVCDGYRDCADGSDEEAC 1452
BLAST of sortilin-related receptor isoform x2 vs. SwissProt
Match: gi|341942117|sp|O88307.3|SORL_MOUSE (RecName: Full=Sortilin-related receptor; AltName: Full=Gp250; AltName: Full=Low-density lipoprotein receptor relative with 11 ligand-binding repeats; Short=LDLR relative with 11 ligand-binding repeats; Short=LR11; AltName: Full=SorLA-1; AltName: Full=Sorting protein-related receptor containing LDLR class A repeats; Short=mSorLA; Flags: Precursor) HSP 1 Score: 93.2041 bits (230), Expect = 1.685e-18 Identity = 53/142 (37.32%), Postives = 66/142 (46.48%), Query Frame = 0 Query: 411 FQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRN-GACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 F C +G C+ +CDG C DGSDE+ C P T P Q + +F+C C P RCDG DC +G DE NC + CT EF C +GE CI +RCDG DC D+SDE C+ Sbjct: 1424 FHCSSGACVMGTWVCDGYRDCADGSDEEAC-PSLANSTAASTPTQFGQ--------------CDRFEFECHQPKKCIPNWKRCDGHQDCQDGQDEANCPTHSTLTCTSREFKCEDGEACIVLSERCDGFLDCSDESDEKACS 1550 HSP 2 Score: 81.6481 bits (200), Expect = 9.106e-15 Identity = 51/144 (35.42%), Postives = 67/144 (46.53%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACD-FQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTR-TEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C FQC NG C+ + CDG C+DGSDE P E + C+ F C NG C P CDG DCP+G DE++C P+ CTR +F C+N ++C+ + CDG C+D SDE Sbjct: 1199 CEASNFQCHNGHCIPQRWACDGDADCQDGSDED---PVSCE---------------------------KKCNGFHCPNGTCIPSSKHCDGLRDCPDGSDEQHCEPF----CTRFMDFVCKNRQQCLFHSMVCDGIVQCRDGSDE 1308 HSP 3 Score: 67.0106 bits (162), Expect = 2.860e-10 Identity = 51/162 (31.48%), Postives = 65/162 (40.12%), Query Frame = 0 Query: 397 TQAPTMVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQ--------PAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 +Q P C+ FQC NG C+ CDG+ C D SDE C P PN + F C NG C P + +CD +NDC + DE++C P+ C F C +G C+ CDG DC D SDE C Sbjct: 1316 SQDPEFHKECDEFGFQCQNGVCISLIWKCDGMDDCGDYSDEANC------------ENPTEAPN-----------CSRYFQFHCENGHCIPNRWKCDRENDCGDWSDEKDCGDSHVLPSPTPGPSTCLPNYFHCSSG-ACVMGTWVCDGYRDCADGSDEEAC 1453 HSP 4 Score: 63.929 bits (154), Expect = 2.733e-9 Identity = 51/156 (32.69%), Postives = 66/156 (42.31%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEV---------EETHIPPPPPPPQPNLPPPEENLDQAAAE-----ACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C +++C NG C+ CD C D SDE+ C P V +E+ P +N D++ E + +F C +G C CDG NDC + DE NC C + F C NG CI CDG DCQD SDE Sbjct: 1078 CLRNQYRCSNGNCINSIWWCDFDNDCGDMSDERNC-PTTVCDADTQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEFNCSSGMCIRSSWVCDGDNDCRDWSDEANCTAIYHT-CEASNFQCHNGH-CIPQRWACDGDADCQDGSDE 1230
BLAST of sortilin-related receptor isoform x2 vs. SwissProt
Match: gi|296452912|sp|Q92673.2|SORL_HUMAN (RecName: Full=Sortilin-related receptor; AltName: Full=Low-density lipoprotein receptor relative with 11 ligand-binding repeats; Short=LDLR relative with 11 ligand-binding repeats; Short=LR11; AltName: Full=SorLA-1; AltName: Full=Sorting protein-related receptor containing LDLR class A repeats; Short=SorLA; Flags: Precursor) HSP 1 Score: 92.8189 bits (229), Expect = 2.287e-18 Identity = 53/158 (33.54%), Postives = 72/158 (45.57%), Query Frame = 0 Query: 395 MSTQAPTMVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRN-GACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 ST P+ +P ++C +G C+ + +CDG C DGSDE+ C P N+ + +F+C C P RCDG DC +G DE NC + C EF C +GE CI +RCDG DC D+SDE C+ Sbjct: 1411 FSTPGPSTCLP---NYYRCSSGTCVMDTWVCDGYRDCADGSDEEAC---------------PLLANVTAASTPTQLGRCDRFEFECHQPKTCIPNWKRCDGHQDCQDGRDEANCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCSDESDEKACS 1550 HSP 2 Score: 80.8777 bits (198), Expect = 1.276e-14 Identity = 52/147 (35.37%), Postives = 63/147 (42.86%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTR--TEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 C E+ C +G C++ + +CDG CRD SDE C EA +FQCRNG C P + CDG DC +G DE+ P C + F C NG CI K CDG DC D SDE C Sbjct: 1158 CRSDEYNCSSGMCIRSSWVCDGDNDCRDWSDEANCTAI--------------------------YHTCEASNFQCRNGHCIPQRWACDGDTDCQDGSDED------PVNCEKKCNGFRCPNG-TCIPSSKHCDGLRDCSDGSDEQHC 1271 HSP 3 Score: 75.0998 bits (183), Expect = 9.035e-13 Identity = 49/144 (34.03%), Postives = 65/144 (45.14%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACD-FQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTR-TEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C FQC NG C+ + CDG C+DGSDE P E + C+ F+C NG C P CDG DC +G DE++C P CT +F C+N ++C+ + CDG C+D SDE Sbjct: 1199 CEASNFQCRNGHCIPQRWACDGDTDCQDGSDED---PVNCE---------------------------KKCNGFRCPNGTCIPSSKHCDGLRDCSDGSDEQHCEPL----CTHFMDFVCKNRQQCLFHSMVCDGIIQCRDGSDE 1308 HSP 4 Score: 67.781 bits (164), Expect = 1.622e-10 Identity = 51/162 (31.48%), Postives = 69/162 (42.59%), Query Frame = 0 Query: 397 TQAPTMVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENC-----IPYQ---PAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 +Q P C+ FQC NG C+ CDG+ C D SDE C P PN + F+C NG C P + +CD +NDC + DE++C +P+ P+ C + C +G C+ CDG DC D SDE C Sbjct: 1316 SQDPEFHKVCDEFGFQCQNGVCISLIWKCDGMDDCGDYSDEANC------------ENPTEAPN-----------CSRYFQFRCENGHCIPNRWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCSSG-TCVMDTWVCDGYRDCADGSDEEAC 1453 HSP 5 Score: 64.6994 bits (156), Expect = 1.538e-9 Identity = 50/156 (32.05%), Postives = 67/156 (42.95%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEV---------EETHIPPPPPPPQPNLPPPEENLDQAAAE-----ACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C +++C NG C+ CD C D SDE+ C P + +E+ P +N D++ E + ++ C +G C CDG NDC + DE NC C + F CRNG CI CDG DCQD SDE Sbjct: 1078 CLRNQYRCSNGNCINSIWWCDFDNDCGDMSDERNC-PTTICDLDTQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEYNCSSGMCIRSSWVCDGDNDCRDWSDEANCTAIYHT-CEASNFQCRNGH-CIPQRWACDGDTDCQDGSDE 1230
BLAST of sortilin-related receptor isoform x2 vs. SwissProt
Match: gi|8928354|sp|Q98930.1|SORL_CHICK (RecName: Full=Sortilin-related receptor; AltName: Full=Low-density lipoprotein receptor relative with 11 ligand-binding repeats; Short=LDLR relative with 11 ligand-binding repeats; Short=LR11; AltName: Full=SorLA-1; AltName: Full=Sorting protein-related receptor containing LDLR class A repeats; Short=SorLA) HSP 1 Score: 92.0485 bits (227), Expect = 4.013e-18 Identity = 58/153 (37.91%), Postives = 70/153 (45.75%), Query Frame = 0 Query: 410 EFQCGNGQCLQENLICDGVYQCRDGSDEQMC--APKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQP----------AECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 +FQCGNG C+ CDG C D SDE+ C +P T +PP P F+C +GAC CDG DC +G DE+ C P C+RTEF C+ KCI KRCDGR DCQD +DE C Sbjct: 1280 QFQCGNGHCIPNQWKCDGENDCGDWSDEKECEGSPLLPITTAVPPTCLPNH-------------------FRCGSGACITNSWVCDGYRDCADGSDEDACPTSHPNVTSSPPAPRGRCSRTEFECQQLHKCIPNWKRCDGRRDCQDGTDERSC 1413 HSP 2 Score: 89.7373 bits (221), Expect = 2.262e-17 Identity = 52/158 (32.91%), Postives = 74/158 (46.84%), Query Frame = 0 Query: 395 MSTQAPTMVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRN-GACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 ++T P +P F+CG+G C+ + +CDG C DGSDE C T PP P + +F+C+ C P RCDG+ DC +G DE +C + C + + C +GE C+ +RCDG DC D SDE +C Sbjct: 1318 ITTAVPPTCLP---NHFRCGSGACITNSWVCDGYRDCADGSDEDACPTSHPNVTSSPPAP---------------RGRCSRTEFECQQLHKCIPNWKRCDGRRDCQDGTDERSCPTHSSLSCPQG-YRCEDGEACLLATERCDGYLDCSDGSDERNCT 1456 HSP 3 Score: 72.4034 bits (176), Expect = 5.162e-12 Identity = 53/144 (36.81%), Postives = 69/144 (47.92%), Query Frame = 0 Query: 410 EFQCGNGQ-CLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENC-IPYQPAECTR-TEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 +F C N Q CL +++CDG QC DGSDE +E P DQ + FQC NG C + +CDG +DC + DE +C P C+R +F C NG CI +CDG +DC D SDE +C Sbjct: 1187 DFVCKNRQQCLSHSMVCDGDIQCEDGSDEDANYAGCAQE--------------PEFHRTCDQFS-----FQCANGVCISLVWKCDGMDDCGDYSDEASCENPTDAPTCSRYYQFQCGNGH-CIPNQWKCDGENDCGDWSDEKEC 1310 HSP 4 Score: 58.151 bits (139), Expect = 1.393e-7 Identity = 50/156 (32.05%), Postives = 62/156 (39.74%), Query Frame = 0 Query: 410 EFQCG-NGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIP-----------PPPPPPQPNLPPPEENLDQ-AAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTR--TEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 +F+C +G C+ + CD C D SDE C + + E N EA FQC NG C P + CDG DC +G DE+ P C + F C NG CI K C+G DC D SDE DC Sbjct: 1029 QFRCRESGTCIPLSYKCDLEDDCGDNSDESHCEAHQCRKDEFSCSSGMCIRLSWRCDDDNDCRDWSDEANCTMFRTCEASSFQCLNGHCIPQRWACDGDADCQDGSDED------PTICEKKCNGFQCPNG-TCISTSKHCNGITDCADASDEQDC 1177
BLAST of sortilin-related receptor isoform x2 vs. SwissProt
Match: gi|1172451|sp|Q05793.1|PGBM_MOUSE (RecName: Full=Basement membrane-specific heparan sulfate proteoglycan core protein; Short=HSPG; Contains: RecName: Full=Endorepellin; Contains: RecName: Full=LG3 peptide; Flags: Precursor) HSP 1 Score: 89.7373 bits (221), Expect = 2.480e-17 Identity = 59/162 (36.42%), Postives = 70/162 (43.21%), Query Frame = 0 Query: 397 TQAPTMVIP-------CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAE-CTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 T P ++P C E C +G C+ + +CDG CRDGSDE CA PPP +PN +F C NG C RCDG DC + DE NC QP E C T F C + +CI CD DC D SDEF C Sbjct: 269 THGPQFLLPSVPGPSACGPQEASCHSGHCIPRDYLCDGQEDCRDGSDELGCA-----------SPPPCEPN----------------EFACENGHCALKLWRCDGDFDCEDRTDEANCSVKQPGEVCGPTHFQCVSTNRCIPASFHCDEESDCPDRSDEFGC 403 HSP 2 Score: 63.929 bits (154), Expect = 2.439e-9 Identity = 58/171 (33.92%), Postives = 73/171 (42.69%), Query Frame = 0 Query: 406 CNMGEFQCGN-GQCLQENLICDGVYQCRDGSDEQMC---APKEVEET----HIPPPP--------------PPPQ---PNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 C EF C + +C+ CD CRD SDE C P+ T + P P PQ P++P P Q A+ C +G C P CDG+ DC +G DE C P C EFAC NG C L RCDG DC+D +DE +C+ Sbjct: 199 CTETEFACHSYNECVALEYRCDRRPDCRDMSDELNCEEPVPELSSSTPAVGKVSPLPLWPEAATTPPPPVTHGPQFLLPSVPGPSACGPQEAS------CHSGHCIPRDYLCDGQEDCRDGSDELGCA--SPPPCEPNEFACENGH-CALKLWRCDGDFDCEDRTDEANCS 360
BLAST of sortilin-related receptor isoform x2 vs. SwissProt
Match: gi|1730112|sp|P98156.1|VLDLR_MOUSE (RecName: Full=Very low-density lipoprotein receptor; Short=VLDL receptor; Short=VLDL-R; Flags: Precursor) HSP 1 Score: 88.5817 bits (218), Expect = 3.505e-17 Identity = 59/161 (36.65%), Postives = 77/161 (47.83%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNL-----PPPEENLDQAAAEACDFQ----------CRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 C+ +FQC NG+C+ CDG C DGSDE+ C K E+ PN P E+ + E C + R+ C P+ RCDG+NDC G DEENC C+ EF C +G +C+ C+G+DDC D SDE DCA Sbjct: 33 CDSSQFQCTNGRCITLLWKCDGDEDCADGSDEKNCVKKTCAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGENDCDNGEDEENC---GNITCSADEFTCSSG-RCVSRNFVCNGQDDCDDGSDELDCA 189 HSP 2 Score: 75.8702 bits (185), Expect = 3.557e-13 Identity = 56/165 (33.94%), Postives = 77/165 (46.67%), Query Frame = 0 Query: 404 IPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKE--VEETHIPPPPPPPQPNL--------PPPEENLDQAAAE--------ACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 I C+ EF C +G+C+ N +C+G C DGSDE CAP E P + +E+L+Q + + QC +G C K RCDG DC +G DE NC P + C +F C +G CI ++C+G DC D SDE +C Sbjct: 152 ITCSADEFTCSSGRCVSRNFVCNGQDDCDDGSDELDCAPPTCGAHEFQCSTSSCIPLSWVCDDDADCSDQSDESLEQCGRQPVIHTKCPTSEIQCGSGECIHKKWRCDGDPDCKDGSDEVNC-PSRT--CRPDQFECEDG-SCIHGSRQCNGIRDCVDGSDEVNC 312 HSP 3 Score: 70.0922 bits (170), Expect = 2.405e-11 Identity = 50/151 (33.11%), Postives = 70/151 (46.36%), Query Frame = 0 Query: 398 QAPTMVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTR-TEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 + P + C E QCG+G+C+ + CDG C+DGSDE C P +P+ F+C +G+C +C+G DC +G DE NC +C +F CR+GE CI+ K CD DC+D SDE Sbjct: 231 RQPVIHTKCPTSEIQCGSGECIHKKWRCDGDPDCKDGSDEVNC------------PSRTCRPD----------------QFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN--QCLGPGKFKCRSGE-CIDMSKVCDQEQDCRDWSDE 350 HSP 4 Score: 63.5438 bits (153), Expect = 2.790e-9 Identity = 32/78 (41.03%), Postives = 47/78 (60.26%), Query Frame = 0 Query: 470 QAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 +A ++ FQC NG C + +CDG DC +G DE+NC+ C ++F C+NG+ C+ +CDG DC+D SDE Sbjct: 30 KAKCDSSQFQCTNGRCITLLWKCDGDEDCADGSDEKNCV---KKTCAESDFVCKNGQ-CVPNRWQCDGDPDCEDGSDE 103 HSP 5 Score: 60.077 bits (144), Expect = 3.232e-8 Identity = 50/157 (31.85%), Postives = 62/157 (39.49%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDE--QMCAPKEVEETHIPPPPPPPQP-------------NLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C +F C NGQC+ CDG C DGSDE + C + I Q + EEN A +F C +G C C+G++DC +G DE +C P C EF C CI CD DC D SDE Sbjct: 72 CAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGENDCDNGEDEENCGNITCSADEFTCSSGRCVSRNFVCNGQDDCDDGSDELDC---APPTCGAHEFQCST-SSCIPLSWVCDDDADCSDQSDE 224
BLAST of sortilin-related receptor isoform x2 vs. SwissProt
Match: gi|317373384|sp|Q07954.2|LRP1_HUMAN (RecName: Full=Prolow-density lipoprotein receptor-related protein 1; Short=LRP-1; AltName: Full=Alpha-2-macroglobulin receptor; Short=A2MR; AltName: Full=Apolipoprotein E receptor; Short=APOER; AltName: CD_antigen=CD91; Contains: RecName: Full=Low-density lipoprotein receptor-related protein 1 85 kDa subunit; Short=LRP-85; Contains: RecName: Full=Low-density lipoprotein receptor-related protein 1 515 kDa subunit; Short=LRP-515; Contains: RecName: Full=Low-density lipoprotein receptor-related protein 1 intracellular domain; Short=LRPICD; Flags: Precursor) HSP 1 Score: 88.9669 bits (219), Expect = 4.258e-17 Identity = 55/164 (33.54%), Postives = 82/164 (50.00%), Query Frame = 0 Query: 405 PCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPK-EVEETHIPPPP-PPPQPNLPPPEENLDQAAAEAC----------DFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTR------TEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 PC+ EF C NG+C+ CDG + C DGSDE+ C P+ ++++ P + + +D + EAC +FQC N C+P+ +CDG++DC + DE P EC R F C+N C+ ++CDG D+C D +DE DC Sbjct: 3574 PCSESEFSCANGRCIAGRWKCDGDHDCADGSDEKDCTPRCDMDQFQCKSGHCIPLRWRCDADADCMDGSDEEACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCGDNSDE------NPEECARFVCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDC 3731 HSP 2 Score: 80.8777 bits (198), Expect = 1.535e-14 Identity = 54/149 (36.24%), Postives = 74/149 (49.66%), Query Frame = 0 Query: 404 IPCNMGEFQCGN-GQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 + C + EF+C + G+C+ CDG C DGSDE P+E D+ E F+C+N C P + +CD NDC + DEE+C P +P C+ +EF+C NG +CI +CDG DC D SDE DC Sbjct: 3492 MTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDE--------------------------PKEECDERTCEPYQFRCKNNRCVPGRWQCDYDNDCGDNSDEESCTP-RP--CSESEFSCANG-RCIAGRWKCDGDHDCADGSDEKDCT 3610 HSP 3 Score: 76.6406 bits (187), Expect = 3.432e-13 Identity = 50/146 (34.25%), Postives = 73/146 (50.00%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCR-NGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 C+ +F+C +G+C+ E+ CDG C D SDE TH Q PP + D+ FQCR +G C P++ RCDG DC + DE++C +F C++ +CI CDG +DC+D+SDE +C Sbjct: 1015 CSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDE----------TH---ANCTNQATRPPGGCHTDE-------FQCRLDGLCIPLRWRCDGDTDCMDSSDEKSCEGVTHVCDPSVKFGCKDSARCISKAWVCDGDNDCEDNSDEENC 1140 HSP 4 Score: 71.2478 bits (173), Expect = 1.664e-11 Identity = 49/144 (34.03%), Postives = 66/144 (45.83%), Query Frame = 0 Query: 410 EFQCGNGQCLQENLICDGVYQCRDGSDEQ--MCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 EF+C NG+C+ +L CDGV C+D SDE+ C + ++T QC NG C C+G +DC +G DE IP C EF CR+G CI RC+ DC+D SDE +C+ Sbjct: 2529 EFECANGECINFSLTCDGVPHCKDKSDEKPSYCNSRRCKKTF----------------------------RQCSNGRCVSNMLWCNGADDCGDGSDE---IPCNKTACGVGEFRCRDG-TCIGNSSRCNQFVDCEDASDEMNCS 2640 HSP 5 Score: 69.707 bits (169), Expect = 5.081e-11 Identity = 54/155 (34.84%), Postives = 70/155 (45.16%), Query Frame = 0 Query: 401 TMVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNG-ACQPMKNRCDGKNDCPEGIDEENCIP--YQPAECT-RTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 T V C + EFQC N C CDG C D SDE P+E PP P F+C+N C + +CDG ++C +G DEE+C P C + EF CRN ++C+ RC+ DDC D SDE DC+ Sbjct: 3649 TGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCGDNSDEN---PEECARFVCPPNRP----------------------FRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAHTTHCKDKKEFLCRN-QRCLSSSLRCNMFDDCGDGSDEEDCS 3777 HSP 6 Score: 69.3218 bits (168), Expect = 6.244e-11 Identity = 55/164 (33.54%), Postives = 71/164 (43.29%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPP---------------EENLDQAAAEAC---DFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 C GEF C N +C+QE CDG C D SDE AP + P + N P +E+ +A C F C +G C P+ CD +DC + DE Y P T+F C NG +CI RCD +DC D+SDE C+ Sbjct: 854 CQPGEFACANSRCIQERWKCDGDNDCLDNSDE---APALCHQHTCPSDRFKCENNRCIPNRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCIPISWTCDLDDDCGDRSDESASCAY-PTCFPLTQFTCNNG-RCININWRCDNDNDCGDNSDEAGCS 1012 HSP 7 Score: 68.5514 bits (166), Expect = 9.756e-11 Identity = 56/162 (34.57%), Postives = 70/162 (43.21%), Query Frame = 0 Query: 404 IPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDE-----QMCAPKEVEETHIPPPPPP-----PQPNLPPPEENLD--QAAAEACDFQCR-NGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRT-----EFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C G+FQC G C ICDG C+D SDE +C P + + T+ P Q N E+ D + FQC C P CD NDC +G DE PA CT+ EF C++ +CI +CDG DDC D SDE Sbjct: 3372 FKCRPGQFQCSTGICTNPAFICDGDNDCQDNSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCGDGEDERDCPEVTCAPNQFQCSITKRCIPRVWVCDRDNDCVDGSDE-------PANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDE 3526 HSP 8 Score: 68.1662 bits (165), Expect = 1.352e-10 Identity = 50/159 (31.45%), Postives = 67/159 (42.14%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDE------QMCAPKEVE--ETHIPPPPPPPQPNLPPPEENLDQAAAEAC---------DFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C+ +F+C N +C+ + +CDG C DGSDE + C P TH+ P + D++ A C +F C+N C P CD DC +G DE Y C +EF C NG CDG +DC D SDE Sbjct: 2734 CSEAQFECQNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAAGCLYNSTCDDREFMCQNRQCIPKHFVCDHDRDCADGSDESPECEY--PTCGPSEFRCANGRCLSSRQWECDGENDCHDQSDE 2890 HSP 9 Score: 66.6254 bits (161), Expect = 4.340e-10 Identity = 49/156 (31.41%), Postives = 65/156 (41.67%), Query Frame = 0 Query: 395 MSTQAPTMVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 + + T V C +F C N +C+ CD C D SDE PP P+ P + FQC G C CDG NDC + DE NC + C ++F C N +CI + RC+G+D+C D DE DC Sbjct: 3323 LGSDGRTCVSNCTASQFVCKNDKCIPFWWKCDTEDDCGDHSDE---------------PPDCPEFKCRPGQ------------FQCSTGICTNPAFICDGDNDCQDNSDEANCDIHV---CLPSQFKCTNTNRCIPGIFRCNGQDNCGDGEDERDC 3448 HSP 10 Score: 65.855 bits (159), Expect = 7.013e-10 Identity = 52/179 (29.05%), Postives = 73/179 (40.78%), Query Frame = 0 Query: 396 STQAPTMVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEET-HIPPPPPPPQPNLPPPEENLDQAAAEACD--------------------------FQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 S + P C +GEF+C +G C+ + C+ C D SDE C+ + + QP +L A + CD F C +G C PM CD ++DC G DE +C + C+ +F C+N +CI CDG DDC D SDE Sbjct: 2595 SDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDCEDASDEMNCSATDCSSYFRLGVKGVLFQP---CERTSLCYAPSWVCDGANDCGDYSDERDCPGVKRPRCPLNYFACPSGRCIPMSWTCDKEDDCEHGEDETHCNKF----CSEAQFECQN-HRCISKQWLCDGSDDCGDGSDE 2765 HSP 11 Score: 65.4698 bits (158), Expect = 9.386e-10 Identity = 48/148 (32.43%), Postives = 58/148 (39.19%), Query Frame = 0 Query: 408 MGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDE--ENCIPYQ---PAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 + +F C NG+C+ N CD C D SDE C+ + + F+C +G C P CDG NDC + DE NC P C EF CR CI RCDG DC D SDE C Sbjct: 979 LTQFTCNNGRCININWRCDNDNDCGDNSDEAGCS-----------------------------HSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSC 1097 HSP 12 Score: 62.003 bits (149), Expect = 1.105e-8 Identity = 47/150 (31.33%), Postives = 65/150 (43.33%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKN-RCDGKNDCPEGIDEE----NCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 C+ EF C N QC+ ++ +CD C DGSDE P P P E F+C NG C + CDG+NDC + DE +C + ++F C +G +C+ C+G+DDC D SDE C Sbjct: 2818 CDDREFMCQNRQCIPKHFVCDHDRDCADGSDES---------------PECEYPTCGPSE------------FRCANGRCLSSRQWECDGENDCHDQSDEAPKNPHCTSQEHKCNASSQFLCSSG-RCVAEALLCNGQDDCGDSSDERGC 2939
BLAST of sortilin-related receptor isoform x2 vs. SwissProt
Match: gi|547843|sp|P35953.1|VLDLR_RABIT (RecName: Full=Very low-density lipoprotein receptor; Short=VLDL receptor; Short=VLDL-R; Flags: Precursor) HSP 1 Score: 88.1965 bits (217), Expect = 4.721e-17 Identity = 60/168 (35.71%), Postives = 79/168 (47.02%), Query Frame = 0 Query: 399 APTMVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPP-----PPPPQPNLPPPEENLDQAAAEACDFQ----------CRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 A C +FQC NG+C+ + CDG C DGSDE+ C K E+ P Q + P E+ + E C + R+ C P+ RCDG++DC G DEENC C+ EF C +G +CI C+G+DDC D SDE DCA Sbjct: 26 ATGRKTKCEASQFQCTNGRCITQLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQCIPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGESDCDSGEDEENC---GNVTCSSDEFTCSSG-RCISRNFVCNGQDDCSDGSDELDCA 189 HSP 2 Score: 77.0258 bits (188), Expect = 1.518e-13 Identity = 56/165 (33.94%), Postives = 78/165 (47.27%), Query Frame = 0 Query: 404 IPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKE--VEETHIPPPPPPPQPNL--------PPPEENLDQAAAE--------ACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 + C+ EF C +G+C+ N +C+G C DGSDE CAP E P + +E+L+Q + A + QC +G C K RCDG DC +G DE NC P + C +F C +G CI ++C+G DC D SDE +C Sbjct: 152 VTCSSDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGAHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQCGRQPVIHTKCPASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNC-PSRT--CRPDQFECEDG-SCIHGSRQCNGIRDCVDGSDEVNC 312 HSP 3 Score: 68.1662 bits (165), Expect = 9.354e-11 Identity = 49/151 (32.45%), Postives = 70/151 (46.36%), Query Frame = 0 Query: 398 QAPTMVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTR-TEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 + P + C E QCG+G+C+ + CDG C+DGSDE C P +P+ F+C +G+C +C+G DC +G DE NC +C +F CR+GE CI+ K C+ DC+D SDE Sbjct: 231 RQPVIHTKCPASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNC------------PSRTCRPD----------------QFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN--QCLGPGKFKCRSGE-CIDISKVCNQEQDCRDWSDE 350 HSP 4 Score: 60.077 bits (144), Expect = 3.069e-8 Identity = 49/157 (31.21%), Postives = 62/157 (39.49%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDE--QMCAPKEVEETHIPPPPPPPQP-------------NLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C +F C NGQC+ CDG C DGSDE + C + I Q + EEN + +F C +G C C+G++DC +G DE +C P C EF C CI CD DC D SDE Sbjct: 72 CAESDFVCNNGQCIPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGESDCDSGEDEENCGNVTCSSDEFTCSSGRCISRNFVCNGQDDCSDGSDELDC---APPTCGAHEFQCSTS-SCIPISWVCDDDADCSDQSDE 224
BLAST of sortilin-related receptor isoform x2 vs. SwissProt
Match: gi|81867523|sp|Q91ZX7.1|LRP1_MOUSE (RecName: Full=Prolow-density lipoprotein receptor-related protein 1; Short=LRP-1; AltName: Full=Alpha-2-macroglobulin receptor; Short=A2MR; AltName: CD_antigen=CD91; Contains: RecName: Full=Low-density lipoprotein receptor-related protein 1 85 kDa subunit; Short=LRP-85; Contains: RecName: Full=Low-density lipoprotein receptor-related protein 1 515 kDa subunit; Short=LRP-515; Contains: RecName: Full=Low-density lipoprotein receptor-related protein 1 intracellular domain; Short=LRPICD; Flags: Precursor) HSP 1 Score: 88.5817 bits (218), Expect = 5.528e-17 Identity = 55/164 (33.54%), Postives = 82/164 (50.00%), Query Frame = 0 Query: 405 PCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPK-EVEETHIPPPP-PPPQPNLPPPEENLDQAAAEAC----------DFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTR------TEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 PC+ EF C NG+C+ CDG + C DGSDE+ C P+ ++++ P + + +D + EAC +FQC N C+P+ +CDG++DC + DE P EC R F C+N C+ ++CDG D+C D +DE DC Sbjct: 3575 PCSESEFSCANGRCIAGRWKCDGDHDCADGSDEKDCTPRCDMDQFQCKSGHCIPLRWRCDADADCMDGSDEEACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCGDNSDE------NPEECARFICPPNRPFRCKNDRVCLWIGRQCDGVDNCGDGTDEEDC 3732 HSP 2 Score: 80.8777 bits (198), Expect = 1.360e-14 Identity = 54/149 (36.24%), Postives = 74/149 (49.66%), Query Frame = 0 Query: 404 IPCNMGEFQCGN-GQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 + C + EF+C + G+C+ CDG C DGSDE P+E D+ E F+C+N C P + +CD NDC + DEE+C P +P C+ +EF+C NG +CI +CDG DC D SDE DC Sbjct: 3493 MTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDE--------------------------PKEECDERTCEPYQFRCKNNRCVPGRWQCDYDNDCGDNSDEESCTP-RP--CSESEFSCANG-RCIAGRWKCDGDHDCADGSDEKDCT 3611 HSP 3 Score: 75.8702 bits (185), Expect = 6.167e-13 Identity = 50/146 (34.25%), Postives = 72/146 (49.32%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCR-NGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 C+ +F+C +G+C+ E+ CDG C D SDE TH Q PP + D+ FQCR +G C P++ RCDG DC + DE++C +F C++ +CI CDG DC+D+SDE +C Sbjct: 1016 CSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDE----------TH---ANCTNQATRPPGGCHSDE-------FQCRLDGLCIPLRWRCDGDTDCMDSSDEKSCEGVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCEDNSDEENC 1141 HSP 4 Score: 72.4034 bits (176), Expect = 7.104e-12 Identity = 49/144 (34.03%), Postives = 66/144 (45.83%), Query Frame = 0 Query: 410 EFQCGNGQCLQENLICDGVYQCRDGSDEQ--MCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 EF+C NG+C+ +L CDGV C+D SDE+ C + ++T QC NG C C+G +DC +G DE IP C EF CR+G CI RC+ DC+D SDE +C+ Sbjct: 2530 EFECANGECISFSLTCDGVSHCKDKSDEKPSYCNSRRCKKTF----------------------------RQCNNGRCVSNMLWCNGVDDCGDGSDE---IPCNKTACGVGEFRCRDG-SCIGNSSRCNQFVDCEDASDEMNCS 2641 HSP 5 Score: 69.3218 bits (168), Expect = 5.780e-11 Identity = 55/164 (33.54%), Postives = 71/164 (43.29%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPP---------------EENLDQAAAEAC---DFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 C GEF C N +C+QE CDG C D SDE AP + P + N P +E+ +A C F C +G C P+ CD +DC + DE Y P T+F C NG +CI RCD +DC D+SDE C+ Sbjct: 855 CQPGEFACANNRCIQERWKCDGDNDCLDNSDE---APALCHQHTCPSDRFKCENNRCIPNRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCIPISWTCDLDDDCGDRSDESASCAY-PTCFPLTQFTCNNG-RCININWRCDNDNDCGDNSDEAGCS 1013 HSP 6 Score: 68.9366 bits (167), Expect = 7.477e-11 Identity = 55/155 (35.48%), Postives = 71/155 (45.81%), Query Frame = 0 Query: 401 TMVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNG-ACQPMKNRCDGKNDCPEGIDEENCIP--YQPAECT-RTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 T V C + EFQC N C CDG C D SDE P+E PP P F+C+N C + +CDG ++C +G DEE+C P Q C + EF CRN ++C+ RC+ DDC D SDE DC+ Sbjct: 3650 TGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCGDNSDEN---PEECARFICPPNRP----------------------FRCKNDRVCLWIGRQCDGVDNCGDGTDEEDCEPPTAQNPHCKDKKEFLCRN-QRCLSSSLRCNMFDDCGDGSDEEDCS 3778 HSP 7 Score: 68.9366 bits (167), Expect = 8.652e-11 Identity = 56/162 (34.57%), Postives = 70/162 (43.21%), Query Frame = 0 Query: 404 IPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDE-----QMCAPKEVEETHIPPPPPP-----PQPNLPPPEENLD--QAAAEACDFQCR-NGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRT-----EFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C G+FQC G C ICDG C+D SDE +C P + + T+ P Q N E+ D + FQC C P CD NDC +G DE PA CT+ EF C++ +CI +CDG DDC D SDE Sbjct: 3373 FKCRPGQFQCSTGICTNPAFICDGDNDCQDNSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCGDGEDERDCPEVTCAPNQFQCSITKRCIPRVWVCDRDNDCVDGSDE-------PANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDE 3527 HSP 8 Score: 66.6254 bits (161), Expect = 3.594e-10 Identity = 49/159 (30.82%), Postives = 65/159 (40.88%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDE------QMCAPKEVE--ETHIPPPPPPPQPNLPPPEENLDQAAAEAC---------DFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C+ +F+C N +C+ + +CDG C DGSDE + C P TH+ P + D++ C +F C+N C P CD DC +G DE Y C EF C NG CDG +DC D SDE Sbjct: 2735 CSEAQFECQNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGTHVCVPERWLCDGDKDCTDGADESVTAGCLYNSTCDDREFMCQNRLCIPKHFVCDHDRDCADGSDESPECEY--PTCGPNEFRCANGRCLSSRQWECDGENDCHDHSDE 2891 HSP 9 Score: 65.855 bits (159), Expect = 6.954e-10 Identity = 52/179 (29.05%), Postives = 73/179 (40.78%), Query Frame = 0 Query: 396 STQAPTMVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEET-HIPPPPPPPQPNLPPPEENLDQAAAEACD--------------------------FQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 S + P C +GEF+C +G C+ + C+ C D SDE C+ + + QP +L A + CD F C +G C PM CD ++DC G DE +C + C+ +F C+N +CI CDG DDC D SDE Sbjct: 2596 SDEIPCNKTACGVGEFRCRDGSCIGNSSRCNQFVDCEDASDEMNCSATDCSSYFRLGVKGVLFQP---CERTSLCYAPSWVCDGANDCGDYSDERDCPGVKRPRCPLNYFACPSGRCIPMSWTCDKEDDCENGEDETHCNKF----CSEAQFECQN-HRCISKQWLCDGSDDCGDGSDE 2766 HSP 10 Score: 65.855 bits (159), Expect = 7.908e-10 Identity = 48/148 (32.43%), Postives = 58/148 (39.19%), Query Frame = 0 Query: 408 MGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDE--ENCIPYQ---PAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 + +F C NG+C+ N CD C D SDE C+ + + F+C +G C P CDG NDC + DE NC P C EF CR CI RCDG DC D SDE C Sbjct: 980 LTQFTCNNGRCININWRCDNDNDCGDNSDEAGCS-----------------------------HSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHANCTNQATRPPGGCHSDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSC 1098 HSP 11 Score: 65.4698 bits (158), Expect = 8.114e-10 Identity = 49/156 (31.41%), Postives = 64/156 (41.03%), Query Frame = 0 Query: 395 MSTQAPTMVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 + T V C +F C N +C+ CD C D SDE PP P+ P + FQC G C CDG NDC + DE NC + C ++F C N +CI + RC+G+D+C D DE DC Sbjct: 3324 LGGDGRTCVSNCTASQFVCKNDKCIPFWWKCDTEDDCGDHSDE---------------PPDCPEFKCRPGQ------------FQCSTGICTNPAFICDGDNDCQDNSDEANCDIHV---CLPSQFKCTNTNRCIPGIFRCNGQDNCGDGEDERDC 3449
BLAST of sortilin-related receptor isoform x2 vs. SwissProt
Match: gi|1730113|sp|P98166.1|VLDLR_RAT (RecName: Full=Very low-density lipoprotein receptor; Short=VLDL receptor; Short=VLDL-R; Flags: Precursor) HSP 1 Score: 87.4261 bits (215), Expect = 9.591e-17 Identity = 59/161 (36.65%), Postives = 76/161 (47.20%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNL-----PPPEENLDQAAAEACDFQ----------CRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 C+ +FQC NG+C+ CDG C DGSDE+ C K E+ PN P E+ + E C + R+ C P RCDG+NDC G DEENC C+ EF C +G +C+ C+G+DDC D SDE DCA Sbjct: 33 CDSSQFQCTNGRCITLLWKCDGDEDCTDGSDEKNCVKKTCAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEISCGARSTQCIPESWRCDGENDCDNGEDEENC---GNITCSADEFTCSSG-RCVSRNFVCNGQDDCDDGSDELDCA 189 HSP 2 Score: 70.4774 bits (171), Expect = 1.672e-11 Identity = 50/151 (33.11%), Postives = 70/151 (46.36%), Query Frame = 0 Query: 398 QAPTMVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTR-TEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 + P + C E QCG+G+C+ + CDG C+DGSDE C P +P+ F+C +G+C +C+G DC +G DE NC +C +F CR+GE CI+ K CD DC+D SDE Sbjct: 231 RQPVIHTKCPTSEIQCGSGECIHKKWRCDGDPDCKDGSDEVNC------------PSRTCRPD----------------QFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN--QCLGPGKFKCRSGE-CIDITKVCDQEQDCRDWSDE 350 HSP 3 Score: 63.929 bits (154), Expect = 2.268e-9 Identity = 49/147 (33.33%), Postives = 64/147 (43.54%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQM--CAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 C EFQC C+ + +CD C D SDE + C + V T P + QC +G C K RCDG DC +G DE NC P + C +F C +G CI ++C+G DC D SDE +C Sbjct: 193 CGAHEFQCRTSSCIPLSWVCDDDADCSDQSDESLEQCGRQPVIHTKCPTS-----------------------EIQCGSGECIHKKWRCDGDPDCKDGSDEVNC-PSRT--CRPDQFECEDG-SCIHGSRQCNGIRDCVDGSDEVNC 312 HSP 4 Score: 63.1586 bits (152), Expect = 3.176e-9 Identity = 32/78 (41.03%), Postives = 47/78 (60.26%), Query Frame = 0 Query: 470 QAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 +A ++ FQC NG C + +CDG DC +G DE+NC+ C ++F C+NG+ C+ +CDG DC+D SDE Sbjct: 30 KAKCDSSQFQCTNGRCITLLWKCDGDEDCTDGSDEKNCV---KKTCAESDFVCKNGQ-CVPNRWQCDGDPDCEDGSDE 103 HSP 5 Score: 62.3882 bits (150), Expect = 5.911e-9 Identity = 51/157 (32.48%), Postives = 63/157 (40.13%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDE--QMCAPKEVEETHIPPPPPPPQP-------------NLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C +F C NGQC+ CDG C DGSDE + C + I Q + EEN A +F C +G C C+G++DC +G DE +C P C EF CR CI CD DC D SDE Sbjct: 72 CAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEISCGARSTQCIPESWRCDGENDCDNGEDEENCGNITCSADEFTCSSGRCVSRNFVCNGQDDCDDGSDELDC---APPTCGAHEFQCRT-SSCIPLSWVCDDDADCSDQSDE 224
BLAST of sortilin-related receptor isoform x2 vs. nr
Match: gi|1042289894|ref|XP_017341989.1| (PREDICTED: LOW QUALITY PROTEIN: basement membrane-specific heparan sulfate proteoglycan core protein [Ictalurus punctatus]) HSP 1 Score: 103.99 bits (258), Expect = 2.786e-19 Identity = 62/147 (42.18%), Postives = 78/147 (53.06%), Query Frame = 0 Query: 404 IPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 IPC EF CG+G+C+ +N +CD C D SDE CAP+ E T +PP P + L A+ C+NG C CDG+ DC +G DE C P+ C EF CRNG +C L RCDG +DC D+SDE DC Sbjct: 223 IPCTTDEFTCGSGECIPQNFVCDNRQDCLDMSDEINCAPE--EPTALPPIQIPSTTSEIKIPARLGPCRAD--QSTCQNGQCISRDYVCDGERDCSDGSDELKC--GTPSPCEPNEFKCRNG-RCALKLWRCDGDNDCHDNSDELDC 362 HSP 2 Score: 90.1225 bits (222), Expect = 6.513e-15 Identity = 54/155 (34.84%), Postives = 73/155 (47.10%), Query Frame = 0 Query: 398 QAPTMVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAE-CTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 + P + PC + C NGQC+ + +CDG C DGSDE C P P +PN +F+CRNG C RCDG NDC + DE +C +P + C +F C++ + CI +CD DC D SDE+ CA Sbjct: 280 KIPARLGPCRADQSTCQNGQCISRDYVCDGERDCSDGSDELKCGT-----------PSPCEPN----------------EFKCRNGRCALKLWRCDGDNDCHDNSDELDCPVKKPGDVCAPEQFTCQSVQTCIPASYQCDEEPDCPDRSDEYGCA 407
BLAST of sortilin-related receptor isoform x2 vs. nr
Match: gi|594040768|ref|XP_006044942.1| (PREDICTED: sortilin-related receptor isoform X2 [Bubalus bubalis] >gi|594040770|ref|XP_006044943.1| PREDICTED: sortilin-related receptor isoform X3 [Bubalus bubalis]) HSP 1 Score: 100.138 bits (248), Expect = 3.367e-18 Identity = 58/157 (36.94%), Postives = 79/157 (50.32%), Query Frame = 0 Query: 396 STQAPTMVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRN-GACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 ST P+M +P ++C +G C+ ++ +CDG C DGSDE+ C P P + P D+ +F+CR C P RCDG DC +G DE NC + CT EF C++GE CI +RCDG DC D+SDE C+ Sbjct: 1308 STPGPSMCLP---NYYRCSSGACVMDSWVCDGYRDCIDGSDEEAC----------PSPANVTAASTPTQLGRCDRF-----EFECRQPKKCIPNWRRCDGHQDCQDGQDEANCPTHSTLTCTALEFQCQDGEACIMLSERCDGFLDCSDESDERACS 1446 HSP 2 Score: 78.5666 bits (192), Expect = 2.414e-11 Identity = 52/147 (35.37%), Postives = 63/147 (42.86%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTR--TEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 C E+ C +G C++ + +CDG CRD SDE C EA +FQCRNG C P + CDG DC +G DE+ P C + F C NG CI K CDG DC D SDE C Sbjct: 1054 CRGDEYSCSSGMCIRPSWVCDGDNDCRDWSDEANCTAI--------------------------YHTCEASNFQCRNGHCIPQRWACDGDMDCQDGSDED------PLNCEKKCNGFRCPNG-TCIPSSKHCDGLHDCSDGSDEQHC 1167 HSP 3 Score: 76.2554 bits (186), Expect = 1.067e-10 Identity = 49/143 (34.27%), Postives = 65/143 (45.45%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTR-TEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C FQC NG C+ + CDG C+DGSDE P E+ + F+C NG C P CDG +DC +G DE++C P CTR +F C+N ++C+ CDG C+D SDE Sbjct: 1095 CEASNFQCRNGHCIPQRWACDGDMDCQDGSDED---PLNCEK--------------------------KCNGFRCPNGTCIPSSKHCDGLHDCSDGSDEQHCEPL----CTRFMDFVCKNRQQCLFQSMVCDGIIQCRDGSDE 1204 HSP 4 Score: 63.929 bits (154), Expect = 9.018e-7 Identity = 50/156 (32.05%), Postives = 65/156 (41.67%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEET------HIPPPPPPPQPNLPPPEENLDQAAAEAC--------DFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C +++C NG+C+ CD C D SDE+ C P V + H P ++ D + C ++ C +G C CDG NDC + DE NC C + F CRNG CI CDG DCQD SDE Sbjct: 974 CLRNQYRCSNGKCINSIWWCDFDNDCGDMSDERNC-PTTVCDLDTQFRCHESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRGDEYSCSSGMCIRPSWVCDGDNDCRDWSDEANCTAIYHT-CEASNFQCRNGH-CIPQRWACDGDMDCQDGSDE 1126
BLAST of sortilin-related receptor isoform x2 vs. nr
Match: gi|594040766|ref|XP_006044941.1| (PREDICTED: sortilin-related receptor isoform X1 [Bubalus bubalis]) HSP 1 Score: 100.138 bits (248), Expect = 4.162e-18 Identity = 58/157 (36.94%), Postives = 79/157 (50.32%), Query Frame = 0 Query: 396 STQAPTMVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRN-GACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDCA 551 ST P+M +P ++C +G C+ ++ +CDG C DGSDE+ C P P + P D+ +F+CR C P RCDG DC +G DE NC + CT EF C++GE CI +RCDG DC D+SDE C+ Sbjct: 1409 STPGPSMCLP---NYYRCSSGACVMDSWVCDGYRDCIDGSDEEAC----------PSPANVTAASTPTQLGRCDRF-----EFECRQPKKCIPNWRRCDGHQDCQDGQDEANCPTHSTLTCTALEFQCQDGEACIMLSERCDGFLDCSDESDERACS 1547 HSP 2 Score: 78.5666 bits (192), Expect = 2.310e-11 Identity = 52/147 (35.37%), Postives = 63/147 (42.86%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTR--TEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 C E+ C +G C++ + +CDG CRD SDE C EA +FQCRNG C P + CDG DC +G DE+ P C + F C NG CI K CDG DC D SDE C Sbjct: 1155 CRGDEYSCSSGMCIRPSWVCDGDNDCRDWSDEANCTAI--------------------------YHTCEASNFQCRNGHCIPQRWACDGDMDCQDGSDED------PLNCEKKCNGFRCPNG-TCIPSSKHCDGLHDCSDGSDEQHC 1268 HSP 3 Score: 76.6406 bits (187), Expect = 9.688e-11 Identity = 49/143 (34.27%), Postives = 65/143 (45.45%), Query Frame = 0 Query: 406 CNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTR-TEFACRNGEKCIEYLKRCDGRDDCQDDSDE 547 C FQC NG C+ + CDG C+DGSDE P E+ + F+C NG C P CDG +DC +G DE++C P CTR +F C+N ++C+ CDG C+D SDE Sbjct: 1196 CEASNFQCRNGHCIPQRWACDGDMDCQDGSDED---PLNCEK--------------------------KCNGFRCPNGTCIPSSKHCDGLHDCSDGSDEQHCEPL----CTRFMDFVCKNRQQCLFQSMVCDGIIQCRDGSDE 1305
BLAST of sortilin-related receptor isoform x2 vs. nr
Match: gi|1343956950|ref|XP_023812623.1| (basement membrane-specific heparan sulfate proteoglycan core protein isoform X4 [Oryzias latipes]) HSP 1 Score: 100.138 bits (248), Expect = 4.301e-18 Identity = 62/152 (40.79%), Postives = 78/152 (51.32%), Query Frame = 0 Query: 402 MVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMC---APKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 ++ PC EF+CG+G C+ N CD CRD SDE+ C AP I PP P PP DQA C++G C CDG+ DC +G DE C P+ C EF C+NG +C L RCDG +DC+D+SDE DC Sbjct: 211 IIRPCMANEFRCGDGTCIPLNYKCDNRADCRDLSDEETCGFIAPVYTTPAPITVPPMKVLPPAPPLRCRADQAT-------CQSGECISRDYICDGERDCADGSDEFRC--GTPSPCEPNEFRCKNG-RCALKLWRCDGDNDCEDNSDEMDC 352 HSP 2 Score: 82.8037 bits (203), Expect = 1.192e-12 Identity = 51/148 (34.46%), Postives = 66/148 (44.59%), Query Frame = 0 Query: 404 IPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAE-CTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 + C + C +G+C+ + ICDG C DGSDE C P P +PN +F+C+NG C RCDG NDC + DE +C P E C F C + KCI +CD DC D SDE+ C Sbjct: 276 LRCRADQATCQSGECISRDYICDGERDCADGSDEFRCG-----------TPSPCEPN----------------EFRCKNGRCALKLWRCDGDNDCEDNSDEMDCPTKGPEEQCASKHFECVSDRKCIPASYQCDEEPDCADRSDEYGC 396
BLAST of sortilin-related receptor isoform x2 vs. nr
Match: gi|1343956956|ref|XP_023812626.1| (basement membrane-specific heparan sulfate proteoglycan core protein isoform X7 [Oryzias latipes]) HSP 1 Score: 100.138 bits (248), Expect = 4.376e-18 Identity = 62/152 (40.79%), Postives = 78/152 (51.32%), Query Frame = 0 Query: 402 MVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMC---APKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 ++ PC EF+CG+G C+ N CD CRD SDE+ C AP I PP P PP DQA C++G C CDG+ DC +G DE C P+ C EF C+NG +C L RCDG +DC+D+SDE DC Sbjct: 211 IIRPCMANEFRCGDGTCIPLNYKCDNRADCRDLSDEETCGFIAPVYTTPAPITVPPMKVLPPAPPLRCRADQAT-------CQSGECISRDYICDGERDCADGSDEFRC--GTPSPCEPNEFRCKNG-RCALKLWRCDGDNDCEDNSDEMDC 352 HSP 2 Score: 82.8037 bits (203), Expect = 1.181e-12 Identity = 51/148 (34.46%), Postives = 66/148 (44.59%), Query Frame = 0 Query: 404 IPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAE-CTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 + C + C +G+C+ + ICDG C DGSDE C P P +PN +F+C+NG C RCDG NDC + DE +C P E C F C + KCI +CD DC D SDE+ C Sbjct: 276 LRCRADQATCQSGECISRDYICDGERDCADGSDEFRCG-----------TPSPCEPN----------------EFRCKNGRCALKLWRCDGDNDCEDNSDEMDCPTKGPEEQCASKHFECVSDRKCIPASYQCDEEPDCADRSDEYGC 396
BLAST of sortilin-related receptor isoform x2 vs. nr
Match: gi|1343956954|ref|XP_023812625.1| (basement membrane-specific heparan sulfate proteoglycan core protein isoform X6 [Oryzias latipes]) HSP 1 Score: 100.138 bits (248), Expect = 4.377e-18 Identity = 62/152 (40.79%), Postives = 78/152 (51.32%), Query Frame = 0 Query: 402 MVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMC---APKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 ++ PC EF+CG+G C+ N CD CRD SDE+ C AP I PP P PP DQA C++G C CDG+ DC +G DE C P+ C EF C+NG +C L RCDG +DC+D+SDE DC Sbjct: 211 IIRPCMANEFRCGDGTCIPLNYKCDNRADCRDLSDEETCGFIAPVYTTPAPITVPPMKVLPPAPPLRCRADQAT-------CQSGECISRDYICDGERDCADGSDEFRC--GTPSPCEPNEFRCKNG-RCALKLWRCDGDNDCEDNSDEMDC 352 HSP 2 Score: 82.8037 bits (203), Expect = 1.223e-12 Identity = 51/148 (34.46%), Postives = 66/148 (44.59%), Query Frame = 0 Query: 404 IPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAE-CTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 + C + C +G+C+ + ICDG C DGSDE C P P +PN +F+C+NG C RCDG NDC + DE +C P E C F C + KCI +CD DC D SDE+ C Sbjct: 276 LRCRADQATCQSGECISRDYICDGERDCADGSDEFRCG-----------TPSPCEPN----------------EFRCKNGRCALKLWRCDGDNDCEDNSDEMDCPTKGPEEQCASKHFECVSDRKCIPASYQCDEEPDCADRSDEYGC 396
BLAST of sortilin-related receptor isoform x2 vs. nr
Match: gi|1343956946|ref|XP_023812621.1| (basement membrane-specific heparan sulfate proteoglycan core protein isoform X2 [Oryzias latipes]) HSP 1 Score: 100.138 bits (248), Expect = 4.535e-18 Identity = 62/152 (40.79%), Postives = 78/152 (51.32%), Query Frame = 0 Query: 402 MVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMC---APKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 ++ PC EF+CG+G C+ N CD CRD SDE+ C AP I PP P PP DQA C++G C CDG+ DC +G DE C P+ C EF C+NG +C L RCDG +DC+D+SDE DC Sbjct: 211 IIRPCMANEFRCGDGTCIPLNYKCDNRADCRDLSDEETCGFIAPVYTTPAPITVPPMKVLPPAPPLRCRADQAT-------CQSGECISRDYICDGERDCADGSDEFRC--GTPSPCEPNEFRCKNG-RCALKLWRCDGDNDCEDNSDEMDC 352 HSP 2 Score: 82.8037 bits (203), Expect = 1.245e-12 Identity = 51/148 (34.46%), Postives = 66/148 (44.59%), Query Frame = 0 Query: 404 IPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAE-CTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 + C + C +G+C+ + ICDG C DGSDE C P P +PN +F+C+NG C RCDG NDC + DE +C P E C F C + KCI +CD DC D SDE+ C Sbjct: 276 LRCRADQATCQSGECISRDYICDGERDCADGSDEFRCG-----------TPSPCEPN----------------EFRCKNGRCALKLWRCDGDNDCEDNSDEMDCPTKGPEEQCASKHFECVSDRKCIPASYQCDEEPDCADRSDEYGC 396
BLAST of sortilin-related receptor isoform x2 vs. nr
Match: gi|1343956952|ref|XP_023812624.1| (basement membrane-specific heparan sulfate proteoglycan core protein isoform X5 [Oryzias latipes]) HSP 1 Score: 100.138 bits (248), Expect = 4.574e-18 Identity = 62/152 (40.79%), Postives = 78/152 (51.32%), Query Frame = 0 Query: 402 MVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMC---APKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 ++ PC EF+CG+G C+ N CD CRD SDE+ C AP I PP P PP DQA C++G C CDG+ DC +G DE C P+ C EF C+NG +C L RCDG +DC+D+SDE DC Sbjct: 211 IIRPCMANEFRCGDGTCIPLNYKCDNRADCRDLSDEETCGFIAPVYTTPAPITVPPMKVLPPAPPLRCRADQAT-------CQSGECISRDYICDGERDCADGSDEFRC--GTPSPCEPNEFRCKNG-RCALKLWRCDGDNDCEDNSDEMDC 352 HSP 2 Score: 82.8037 bits (203), Expect = 1.233e-12 Identity = 51/148 (34.46%), Postives = 66/148 (44.59%), Query Frame = 0 Query: 404 IPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAE-CTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 + C + C +G+C+ + ICDG C DGSDE C P P +PN +F+C+NG C RCDG NDC + DE +C P E C F C + KCI +CD DC D SDE+ C Sbjct: 276 LRCRADQATCQSGECISRDYICDGERDCADGSDEFRCG-----------TPSPCEPN----------------EFRCKNGRCALKLWRCDGDNDCEDNSDEMDCPTKGPEEQCASKHFECVSDRKCIPASYQCDEEPDCADRSDEYGC 396
BLAST of sortilin-related receptor isoform x2 vs. nr
Match: gi|1343956948|ref|XP_023812622.1| (basement membrane-specific heparan sulfate proteoglycan core protein isoform X3 [Oryzias latipes]) HSP 1 Score: 100.138 bits (248), Expect = 4.615e-18 Identity = 62/152 (40.79%), Postives = 78/152 (51.32%), Query Frame = 0 Query: 402 MVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMC---APKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 ++ PC EF+CG+G C+ N CD CRD SDE+ C AP I PP P PP DQA C++G C CDG+ DC +G DE C P+ C EF C+NG +C L RCDG +DC+D+SDE DC Sbjct: 200 IIRPCMANEFRCGDGTCIPLNYKCDNRADCRDLSDEETCGFIAPVYTTPAPITVPPMKVLPPAPPLRCRADQAT-------CQSGECISRDYICDGERDCADGSDEFRC--GTPSPCEPNEFRCKNG-RCALKLWRCDGDNDCEDNSDEMDC 341 HSP 2 Score: 82.8037 bits (203), Expect = 1.277e-12 Identity = 51/148 (34.46%), Postives = 66/148 (44.59%), Query Frame = 0 Query: 404 IPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAE-CTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 + C + C +G+C+ + ICDG C DGSDE C P P +PN +F+C+NG C RCDG NDC + DE +C P E C F C + KCI +CD DC D SDE+ C Sbjct: 265 LRCRADQATCQSGECISRDYICDGERDCADGSDEFRCG-----------TPSPCEPN----------------EFRCKNGRCALKLWRCDGDNDCEDNSDEMDCPTKGPEEQCASKHFECVSDRKCIPASYQCDEEPDCADRSDEYGC 385
BLAST of sortilin-related receptor isoform x2 vs. nr
Match: gi|1343956944|ref|XP_023812619.1| (basement membrane-specific heparan sulfate proteoglycan core protein isoform X1 [Oryzias latipes]) HSP 1 Score: 99.7525 bits (247), Expect = 4.657e-18 Identity = 62/152 (40.79%), Postives = 78/152 (51.32%), Query Frame = 0 Query: 402 MVIPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMC---APKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAECTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 ++ PC EF+CG+G C+ N CD CRD SDE+ C AP I PP P PP DQA C++G C CDG+ DC +G DE C P+ C EF C+NG +C L RCDG +DC+D+SDE DC Sbjct: 211 IIRPCMANEFRCGDGTCIPLNYKCDNRADCRDLSDEETCGFIAPVYTTPAPITVPPMKVLPPAPPLRCRADQAT-------CQSGECISRDYICDGERDCADGSDEFRC--GTPSPCEPNEFRCKNG-RCALKLWRCDGDNDCEDNSDEMDC 352 HSP 2 Score: 82.8037 bits (203), Expect = 1.266e-12 Identity = 51/148 (34.46%), Postives = 66/148 (44.59%), Query Frame = 0 Query: 404 IPCNMGEFQCGNGQCLQENLICDGVYQCRDGSDEQMCAPKEVEETHIPPPPPPPQPNLPPPEENLDQAAAEACDFQCRNGACQPMKNRCDGKNDCPEGIDEENCIPYQPAE-CTRTEFACRNGEKCIEYLKRCDGRDDCQDDSDEFDC 550 + C + C +G+C+ + ICDG C DGSDE C P P +PN +F+C+NG C RCDG NDC + DE +C P E C F C + KCI +CD DC D SDE+ C Sbjct: 276 LRCRADQATCQSGECISRDYICDGERDCADGSDEFRCG-----------TPSPCEPN----------------EFRCKNGRCALKLWRCDGDNDCEDNSDEMDCPTKGPEEQCASKHFECVSDRKCIPASYQCDEEPDCADRSDEYGC 396 The following BLAST results are available for this feature:
BLAST of sortilin-related receptor isoform x2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 13
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BLAST of sortilin-related receptor isoform x2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of sortilin-related receptor isoform x2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold781_size98004:62350..64624- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold781_size98004-snap-gene-0.20 ID=maker-scaffold781_size98004-snap-gene-0.20|Name=sortilin-related receptor isoform x2|organism=Tigriopus kingsejongensis|type=gene|length=2275bp|location=Sequence derived from alignment at scaffold781_size98004:62350..64624- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'sortilin-related receptor isoform x2' has the following synonyms
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