tho complex subunit 4, maker-scaffold802_size95064-snap-gene-0.17 (gene) Tigriopus kingsejongensis

Overview
Nametho complex subunit 4
Unique Namemaker-scaffold802_size95064-snap-gene-0.17
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of tho complex subunit 4 vs. L. salmonis genes
Match: EMLSAG00000006455 (supercontig:LSalAtl2s:LSalAtl2s353:12684:13380:-1 gene:EMLSAG00000006455 transcript:EMLSAT00000006455 description:"augustus_masked-LSalAtl2s353-processed-gene-0.0")

HSP 1 Score: 70.0922 bits (170), Expect = 6.000e-15
Identity = 53/145 (36.55%), Postives = 75/145 (51.72%), Query Frame = 0 
Query:   91 ELFSEFGILTSASLHHDHDGKTLGTAEIVFQAPGQAQAAIKKYHGVPLDNRTMNIQFAINDTSNAGAQPPWSARLGLREDQMVPPACNGFRGRPWNNSPQFRPPNGQNFKPKGGKKKFKRGPNQLGQNSS-LPSAEELDAEMDAY 234
            ELFSEFG L +A++H+D  G++LGTA ++F+    A  A  +  GVPLD R M IQ A   TS+ G     S R G              +G    N P+ R  NG+  K  G + +  R   + G   S +P+AE+LD ++D Y
Sbjct:   72 ELFSEFGRLKTAAVHYDRSGRSLGTAXVIFERKSDAVKAXXQXXGVPLDGRAMTIQLA---TSDFGKPSLGSPRRG------------SPKGVAKTNMPR-RRSNGRVVKVGGERGRGGRRGGKRGAKRSPVPTAEDLDKQLDTY 200
[Close]
BLAST of tho complex subunit 4 vs. L. salmonis genes
Match: EMLSAG00000001347 (supercontig:LSalAtl2s:LSalAtl2s1228:18575:23247:1 gene:EMLSAG00000001347 transcript:EMLSAT00000001347 description:"augustus_masked-LSalAtl2s1228-processed-gene-0.2")

HSP 1 Score: 51.9878 bits (123), Expect = 3.855e-8
Identity = 26/74 (35.14%), Postives = 38/74 (51.35%), Query Frame = 0 
Query:   74 KILLSNLAPTVTQSDVIELFSEFGILTSASLHHDHDGKTLGTAEIVFQAPGQAQAAIKKYHGVPLDNRTMNIQF 147
            K+++SNL   VTQ D++ELF + G L    +       + G AE+VF     A  A++ YH   LD + M  Q 
Sbjct:  298 KVIVSNLHNAVTQEDIVELFGDVGPLKRVKV------SSPGAAEVVFVNKEDAMKAVETYHNRQLDGKAMKCQL 365
[Close]
BLAST of tho complex subunit 4 vs. SwissProt
Match: gi|82236414|sp|Q6GLW1.1|THO4B_XENLA (RecName: Full=THO complex subunit 4-B; Short=Tho4-B; AltName: Full=Aly/REF export factor-B)

HSP 1 Score: 85.1149 bits (209), Expect = 1.097e-18
Identity = 37/75 (49.33%), Postives = 55/75 (73.33%), Query Frame = 0 
Query:   74 KILLSNLAPTVTQSDVIELFSEFGILTSASLHHDHDGKTLGTAEIVFQAPGQAQAAIKKYHGVPLDNRTMNIQFA 148
            K+L+SNL   V+ +D+ ELF+EFG L  A++H+D  G++LGTA++ F+    A  A+K+Y+GVPLD R+MNIQ  
Sbjct:  106 KLLVSNLDFGVSDADIQELFAEFGSLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRSMNIQLV 180
[Close]
BLAST of tho complex subunit 4 vs. SwissProt
Match: gi|48429165|sp|Q86V81.3|THOC4_HUMAN (RecName: Full=THO complex subunit 4; Short=Tho4; AltName: Full=Ally of AML-1 and LEF-1; AltName: Full=Aly/REF export factor; AltName: Full=Transcriptional coactivator Aly/REF; AltName: Full=bZIP-enhancing factor BEF)

HSP 1 Score: 84.3445 bits (207), Expect = 2.127e-18
Identity = 60/166 (36.14%), Postives = 83/166 (50.00%), Query Frame = 0 
Query:   74 KILLSNLAPTVTQSDVIELFSEFGILTSASLHHDHDGKTLGTAEIVFQAPGQAQAAIKKYHGVPLDNRTMNIQFAINDTSNAGAQPPWSARLGLREDQMVPPACNGFRGRPWNNSPQFRPPNGQNFKPKGGKKKFKRGPNQLGQNSSLPSAEELDAEMDAYMAEAE 239
            K+L+SNL   V+ +D+ ELF+EFG L  A++H+D  G++LGTA++ F+    A  A+K+Y+GVPLD R MNIQ     TS   AQ                PA +  RG    N        G   +         RG      +    SAEELDA++DAY A  +
Sbjct:  107 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLV---TSQIDAQR--------------RPAQSVNRGGMTRNRGAGGFGGGGGTRRGTRGGARGRGRGAGRNSKQQLSAEELDAQLDAYNARMD 255
[Close]
BLAST of tho complex subunit 4 vs. SwissProt
Match: gi|82230182|sp|Q58EA2.1|THO4A_XENLA (RecName: Full=THO complex subunit 4-A; Short=Tho4-A; AltName: Full=Aly/REF export factor-A)

HSP 1 Score: 83.9593 bits (206), Expect = 2.649e-18
Identity = 37/77 (48.05%), Postives = 55/77 (71.43%), Query Frame = 0 
Query:   74 KILLSNLAPTVTQSDVIELFSEFGILTSASLHHDHDGKTLGTAEIVFQAPGQAQAAIKKYHGVPLDNRTMNIQFAIN 150
            K+L+SNL   V+ +D+ ELF+EFG L  A++H+D  G++LGTA++ F+    A  A+K+Y+GVPLD R MNIQ   +
Sbjct:  107 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTS 183
[Close]
BLAST of tho complex subunit 4 vs. SwissProt
Match: gi|251765071|sp|B5FXN8.1|THOC4_TAEGU (RecName: Full=THO complex subunit 4; Short=Tho4; AltName: Full=Aly/REF export factor)

HSP 1 Score: 83.9593 bits (206), Expect = 2.727e-18
Identity = 37/75 (49.33%), Postives = 54/75 (72.00%), Query Frame = 0 
Query:   74 KILLSNLAPTVTQSDVIELFSEFGILTSASLHHDHDGKTLGTAEIVFQAPGQAQAAIKKYHGVPLDNRTMNIQFA 148
            K+L+SNL   V+ +D+ ELF+EFG L  A++H+D  G++LGTA++ F+    A  A+K+Y+GVPLD R MNIQ  
Sbjct:  104 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLV 178
[Close]
BLAST of tho complex subunit 4 vs. SwissProt
Match: gi|123915952|sp|Q28FB9.1|THOC4_XENTR (RecName: Full=THO complex subunit 4; Short=Tho4; AltName: Full=Aly/REF export factor)

HSP 1 Score: 83.9593 bits (206), Expect = 3.064e-18
Identity = 37/75 (49.33%), Postives = 54/75 (72.00%), Query Frame = 0 
Query:   74 KILLSNLAPTVTQSDVIELFSEFGILTSASLHHDHDGKTLGTAEIVFQAPGQAQAAIKKYHGVPLDNRTMNIQFA 148
            K+L+SNL   V+ +D+ ELF+EFG L  A++H+D  G++LGTA++ F+    A  A+K+Y+GVPLD R MNIQ  
Sbjct:  110 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLV 184
[Close]
BLAST of tho complex subunit 4 vs. SwissProt
Match: gi|48474242|sp|O08583.3|THOC4_MOUSE (RecName: Full=THO complex subunit 4; Short=Tho4; AltName: Full=Ally of AML-1 and LEF-1; AltName: Full=Aly/REF export factor; AltName: Full=REF1-I; AltName: Full=RNA and export factor-binding protein 1; AltName: Full=Transcriptional coactivator Aly/REF)

HSP 1 Score: 83.5741 bits (205), Expect = 3.846e-18
Identity = 37/75 (49.33%), Postives = 54/75 (72.00%), Query Frame = 0 
Query:   74 KILLSNLAPTVTQSDVIELFSEFGILTSASLHHDHDGKTLGTAEIVFQAPGQAQAAIKKYHGVPLDNRTMNIQFA 148
            K+L+SNL   V+ +D+ ELF+EFG L  A++H+D  G++LGTA++ F+    A  A+K+Y+GVPLD R MNIQ  
Sbjct:  106 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLV 180
[Close]
BLAST of tho complex subunit 4 vs. SwissProt
Match: gi|122145089|sp|Q3T0I4.1|THOC4_BOVIN (RecName: Full=THO complex subunit 4; Short=Tho4; AltName: Full=Ally of AML-1 and LEF-1; AltName: Full=Aly/REF export factor; AltName: Full=Transcriptional coactivator Aly/REF; AltName: Full=bZIP-enhancing factor BEF)

HSP 1 Score: 83.5741 bits (205), Expect = 4.774e-18
Identity = 37/75 (49.33%), Postives = 54/75 (72.00%), Query Frame = 0 
Query:   74 KILLSNLAPTVTQSDVIELFSEFGILTSASLHHDHDGKTLGTAEIVFQAPGQAQAAIKKYHGVPLDNRTMNIQFA 148
            K+L+SNL   V+ +D+ ELF+EFG L  A++H+D  G++LGTA++ F+    A  A+K+Y+GVPLD R MNIQ  
Sbjct:  107 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLV 181
[Close]
BLAST of tho complex subunit 4 vs. SwissProt
Match: gi|48474967|sp|Q9JJW6.1|ALRF2_MOUSE (RecName: Full=Aly/REF export factor 2; AltName: Full=Alyref; AltName: Full=RNA and export factor-binding protein 2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.083e-16
Identity = 52/164 (31.71%), Postives = 82/164 (50.00%), Query Frame = 0 
Query:    1 MSAYVDLTLEELISKKKIPTRSSFRKQGGGKVRKSFQSLHQSRRSPTATWPMGTWGPIASRRPPTLPN----------------LGMSNKILLSNLAPTVTQSDVIELFSEFGILTSASLHHDHDGKTLGTAEIVFQAPGQAQAAIKKYHGVPLDNRTMNIQFA 148
            M+  +D++L+++I   +   R +   +GGG            RR+  A    G   P    RP  LP+                +    K+L+SNL   V+ +D+ ELF+EFG L  A++ +D  G++LGTA++ F+    A  A+K+Y GVPLD R M+IQ  
Sbjct:    1 MADKMDMSLDDIIKLNRNQRRVN---RGGG-----------PRRNRPAIARGGRNRPAPYSRPKPLPDKWQHDLFDSGCGGGEGVETGAKLLVSNLDFGVSDADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQLV 150
[Close]
BLAST of tho complex subunit 4 vs. SwissProt
Match: gi|75329749|sp|Q8L773.1|THO4A_ARATH (RecName: Full=THO complex subunit 4A; AltName: Full=ALYREF homolog 1; Short=AtALY1)

HSP 1 Score: 77.411 bits (189), Expect = 6.439e-16
Identity = 53/172 (30.81%), Postives = 85/172 (49.42%), Query Frame = 0 
Query:    1 MSAYVDLTLEELISKKKI------PTRSSFRKQGGGKVRKSFQSLHQSRRSP--TATWPMGTWG-------PIASRRPPTLPNLGMSNKILLSNLAPTVTQSDVIELFSEFGILTSASLHHDHDGKTLGTAEIVFQAPGQAQAAIKKYHGVPLDNRTMNIQFAINDTSNAGA 157
            MS  +D++L+++I+K +       P R +    G G  R++  +   +R +P  +A  P  TWG           R   +   +    K+ +SNL   V   D+ ELF+E G L   ++H D  G++ GTAE+V+   G A AA+KKY+ V LD + M I+    +   A A
Sbjct:    1 MSTGLDMSLDDMIAKNRKSRGGAGPARGTGSGSGPGPTRRNNPNRKSTRSAPYQSAKAPESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTNLQTAAA 172
[Close]
BLAST of tho complex subunit 4 vs. SwissProt
Match: gi|75329741|sp|Q8L719.1|THO4B_ARATH (RecName: Full=THO complex subunit 4B; AltName: Full=ALYREF homolog 2; Short=AtALY2)

HSP 1 Score: 70.8626 bits (172), Expect = 2.605e-13
Identity = 33/75 (44.00%), Postives = 47/75 (62.67%), Query Frame = 0 
Query:   74 KILLSNLAPTVTQSDVIELFSEFGILTSASLHHDHDGKTLGTAEIVFQAPGQAQAAIKKYHGVPLDNRTMNIQFA 148
            K+ +SNL   V+  D+ ELFSE G L    +H+D  G++ GTAE+VF   G A AA+K+Y+ V LD + M I+  
Sbjct:  109 KLYISNLDYGVSNEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGKLMKIEIV 183
[Close]
BLAST of tho complex subunit 4 vs. nr
Match: gi|1059399449|ref|XP_017772664.1| (PREDICTED: THO complex subunit 4-like [Nicrophorus vespilloides])

HSP 1 Score: 118.627 bits (296), Expect = 1.243e-28
Identity = 71/167 (42.51%), Postives = 99/167 (59.28%), Query Frame = 0 
Query:   74 KILLSNLAPTVTQSDVIELFSEFGILTSASLHHDHDGKTLGTAEIVFQAPGQAQAAIKKYHGVPLDNRTMNIQFAINDTSNAGAQPPWSARLGLREDQMVPPACNGFRGRPWNNSP---QFRPPNGQNFKPKGGKKKFKRGPNQLGQNSSLPSAEELDAEMDAYMAE 237
            K+L+SNL   V+ SD+ ELF+EFG L SA++H+D  G++LGTA+++F+    A  A+K+Y+GVPLD R MNIQ   ++ S     P  S+R+G+R     PPA N F       SP   + RP  G     +GG+   +   N      S P+AEELDAE+DAY  E
Sbjct:  128 KLLVSNLDFGVSDSDIQELFAEFGPLKSAAVHYDRSGRSLGTADVIFERKMDAHKALKQYNGVPLDGRAMNIQITTSEVS-----PLRSSRIGVR----TPPAENKFTKPSTRKSPLAARSRPTRGT----RGGRGAAR---NAKAPRKSAPTAEELDAELDAYTKE 278
[Close]
BLAST of tho complex subunit 4 vs. nr
Match: gi|752877294|ref|XP_011256074.1| (PREDICTED: THO complex subunit 4 [Camponotus floridanus])

HSP 1 Score: 111.309 bits (277), Expect = 5.053e-26
Identity = 80/231 (34.63%), Postives = 116/231 (50.22%), Query Frame = 0 
Query:   19 PTRSSFRKQ--GGGKVRK------SFQSLHQSRRSPTATWPMGTWGPIASRRPPTLPNLGMSNKILLSNLAPTVTQSDVIELFSEFGILTSASLHHDHDGKTLGTAEIVFQAPGQAQAAIKKYHGVPLDNRTMNIQFAINDTSNAGAQPPWSARLGLREDQMVPPACNGFRGRPWNNSPQ--FRPPNGQNFKPKGGKKKFKRGPNQLGQNSSLPSAEELDAEMDAYMAEAE 239
            P R + R Q  GGG +R       +  SL  +R    + W    +  +       + N G + K+L+SNL   V+ SD+ ELFSEFG L SA++H+D  G++LG+A+++F+    A  A+K+YHGVPLD R MNIQ A ++       P  S R G R             G  +   PQ  FR   G       G    + G   + Q +  P+AEELDAE++AY+ E +
Sbjct:   37 PRRGARRAQRVGGGVMRGRNRGGIARSSLPYTRGDVNSAWKHDMFDGVKKVGRGVIGNAG-TTKLLVSNLDFGVSDSDIQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYHGVPLDGREMNIQVATSEL------PVTSVRGGPR-----------LSGTNYTQRPQTRFRGNRGTGSVRGRGGSGRRGGRGGIRQVTKTPTAEELDAELEAYVKEVK 249
[Close]
BLAST of tho complex subunit 4 vs. nr
Match: gi|307180346|gb|EFN68372.1| (THO complex subunit 4 [Camponotus floridanus])

HSP 1 Score: 110.923 bits (276), Expect = 5.257e-26
Identity = 80/231 (34.63%), Postives = 116/231 (50.22%), Query Frame = 0 
Query:   19 PTRSSFRKQ--GGGKVRK------SFQSLHQSRRSPTATWPMGTWGPIASRRPPTLPNLGMSNKILLSNLAPTVTQSDVIELFSEFGILTSASLHHDHDGKTLGTAEIVFQAPGQAQAAIKKYHGVPLDNRTMNIQFAINDTSNAGAQPPWSARLGLREDQMVPPACNGFRGRPWNNSPQ--FRPPNGQNFKPKGGKKKFKRGPNQLGQNSSLPSAEELDAEMDAYMAEAE 239
            P R + R Q  GGG +R       +  SL  +R    + W    +  +       + N G + K+L+SNL   V+ SD+ ELFSEFG L SA++H+D  G++LG+A+++F+    A  A+K+YHGVPLD R MNIQ A ++       P  S R G R             G  +   PQ  FR   G       G    + G   + Q +  P+AEELDAE++AY+ E +
Sbjct:   35 PRRGARRAQRVGGGVMRGRNRGGIARSSLPYTRGDVNSAWKHDMFDGVKKVGRGVIGNAG-TTKLLVSNLDFGVSDSDIQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYHGVPLDGREMNIQVATSEL------PVTSVRGGPR-----------LSGTNYTQRPQTRFRGNRGTGSVRGRGGSGRRGGRGGIRQVTKTPTAEELDAELEAYVKEVK 247
[Close]
BLAST of tho complex subunit 4 vs. nr
Match: gi|1229711641|ref|XP_022117840.1| (THO complex subunit 4-like [Pieris rapae])

HSP 1 Score: 108.997 bits (271), Expect = 3.343e-25
Identity = 65/164 (39.63%), Postives = 94/164 (57.32%), Query Frame = 0 
Query:   74 KILLSNLAPTVTQSDVIELFSEFGILTSASLHHDHDGKTLGTAEIVFQAPGQAQAAIKKYHGVPLDNRTMNIQFAINDTSNAGAQPPWSARLGLREDQMVPPACNGFRGRPWNNSPQFRPPNGQNFKPKGGKKKFKRGPNQLGQNSSLPSAEELDAEMDAYMAE 237
            K+L+SNL   V+ SD+ ELFSEFGIL SA++H+D  G++LGTA++VF+    A  A+K+Y+GVPLD R MNIQ A ++ S+  A+P           +  P     FR    N     +  N +    +GG  K       +     +P+AE+LDAE+DAY+ E
Sbjct:   99 KLLVSNLDFAVSDSDIQELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQYNGVPLDGRAMNIQLATSEISSLRAEP-----------RNKPIVGRAFRRHSGN-----KEGNDRKLNVRGGGGKRGGRGGGIRGKRPVPTAEQLDAELDAYVKE 246
[Close]
BLAST of tho complex subunit 4 vs. nr
Match: gi|759054119|ref|XP_011336252.1| (PREDICTED: THO complex subunit 4 [Ooceraea biroi] >gi|607361714|gb|EZA55989.1| RNA and export factor-binding protein [Ooceraea biroi])

HSP 1 Score: 108.997 bits (271), Expect = 3.454e-25
Identity = 75/211 (35.55%), Postives = 111/211 (52.61%), Query Frame = 0 
Query:   29 GGKVRKSFQSLHQSRRSPTATWPMGTWGPIASRRPPTLPNLGMSNKILLSNLAPTVTQSDVIELFSEFGILTSASLHHDHDGKTLGTAEIVFQAPGQAQAAIKKYHGVPLDNRTMNIQFAINDTSNAGAQPPWSARLGLREDQMVPPACNGFRGRPWNNSPQFRPPNGQNFKPKGGKKKFKRGPNQLGQNSSLPSAEELDAEMDAYMAEAE 239
            GG VR    SL  +R    + W    +  +       + + G + K+L+SNL   V+ SD+ ELFSEFG L SA++H+D  G++LG+A+++F+    A  A+K+YHGVPLD R MNIQ A ++       P  S R G R             G  +   PQ R    ++  P  G+   +RG     Q +  P+AEELDAE++AY+ E +
Sbjct:   60 GGIVR---SSLPYTRGDVNSAWKHDMFDGVKKVGRGAIGSAG-TTKLLVSNLDFGVSDSDIQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYHGVPLDGREMNIQVATSEL------PITSIRAGPR-----------LSGANYTQRPQTRFRGNRSTGPIRGRGTGRRGRGGTRQVTKTPTAEELDAELEAYVKEVK 249
[Close]
BLAST of tho complex subunit 4 vs. nr
Match: gi|815821906|ref|XP_012232208.1| (PREDICTED: THO complex subunit 4 [Linepithema humile])

HSP 1 Score: 107.842 bits (268), Expect = 1.154e-24
Identity = 78/229 (34.06%), Postives = 114/229 (49.78%), Query Frame = 0 
Query:   19 PTRSSFRKQ--GGGKVRK------SFQSLHQSRRSPTATWPMGTWGPIASRRPPTLPNLGMSNKILLSNLAPTVTQSDVIELFSEFGILTSASLHHDHDGKTLGTAEIVFQAPGQAQAAIKKYHGVPLDNRTMNIQFAINDTSNAGAQPPWSARLGLREDQMVPPACNGFRGRPWNNSPQFRPPNGQNFKPKGGKKKFKRGPNQLGQNSSLPSAEELDAEMDAYMAEAE 239
            P R + R Q  GGG +R       +  SL  +R    + W    +  +       + N G + K+L+SNL   V+ SD+ ELFSEFG L SA++H+D  G++LG+A+++F+    A  A+K+YHGVPLD R MNIQ A ++       P  S R G R             G  +   PQ R    +      G    + G     Q +  P+AEELDAE++AY+ E +
Sbjct:   52 PRRGARRSQRVGGGVIRGRNRGGIARSSLPYTRGDVNSAWKHDMFDGLKKVGRGAIGNAG-TTKLLVSNLDFGVSDSDIQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYHGVPLDGREMNIQVATSEL------PITSIRGGPR-----------LSGANYTQRPQTRFRGNRGSVRGRGNGGRRGGRGGTRQVTKTPTAEELDAELEAYVKEVK 262
[Close]
BLAST of tho complex subunit 4 vs. nr
Match: gi|1130237800|ref|XP_019762555.1| (PREDICTED: THO complex subunit 4-A [Dendroctonus ponderosae])

HSP 1 Score: 107.457 bits (267), Expect = 1.563e-24
Identity = 66/164 (40.24%), Postives = 92/164 (56.10%), Query Frame = 0 
Query:   74 KILLSNLAPTVTQSDVIELFSEFGILTSASLHHDHDGKTLGTAEIVFQAPGQAQAAIKKYHGVPLDNRTMNIQFAINDTSNAGAQPPWSARLGLREDQMVPPACNGFRGRPWNNSPQFRPPNGQNFKPKGGKKKFKRGPNQLGQNSSLPSAEELDAEMDAYMAE 237
            K+L+SNL   V+ SD+ ELF+EFG L SA++H+D  G++LGTA+++F+    A  A+K+Y+GVPLD R MNIQ     TS     P       + E + V  +  G RG       Q RP  GQ  +        +RG     QN   P+A++LDAE+DAY  E
Sbjct:  105 KLLVSNLDFGVSDSDIQELFAEFGPLKSAAVHYDRSGRSLGTADVIFERRNDAIKAMKQYNGVPLDGRAMNIQMT---TSEIPVPPRRVGGPAVGERRFVSRSPRGARG-------QARPVRGQPNR--------RRGAFNRNQNRKQPTAQDLDAELDAYSKE 250
[Close]
BLAST of tho complex subunit 4 vs. nr
Match: gi|304441001|gb|ADM33940.1| (ALY [Bombyx mori])

HSP 1 Score: 107.457 bits (267), Expect = 1.666e-24
Identity = 73/210 (34.76%), Postives = 107/210 (50.95%), Query Frame = 0 
Query:   37 QSLHQSRRSPTATWPMGTWGPIASRRPPTLPNLGMS--NKILLSNLAPTVTQSDVIELFSEFGILTSASLHHDHDGKTLGTAEIVFQAPGQAQAAIKKYHGVPLDNRTMNIQFAINDTSNAGAQPPWSARLG-------LREDQMVPPACNGFRGRPWNNSPQFRPPNGQNFKPKGGKKKFKRGPNQLGQNSSLPSAEELDAEMDAYMAE 237
            +S + SR    +TW    +     R+ P       +   K+L+SNL   V+ SD+ ELFSEFGIL SAS+H+D  G++LGTA++VF+    A  A+K+Y+GVPLD R MNIQ A ++ +    +P    R+G       +R +    P   G   R  +NS               GK+              +P+AE+LDAE+DAY+ E
Sbjct:   62 KSTNYSRGDVNSTWKHDMFNDFGERKLPRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILESASVHYDRSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINT--LRPEARNRIGGASVGGTIRNN----PKRGGGGIRNQSNSGARGGNRRGRGGAGRGKR-------------PVPTAEQLDAELDAYVKE 252
[Close]
BLAST of tho complex subunit 4 vs. nr
Match: gi|1009383875|gb|KYN06420.1| (RNA and export factor-binding protein 2 [Cyphomyrmex costatus])

HSP 1 Score: 107.071 bits (266), Expect = 2.053e-24
Identity = 68/204 (33.33%), Postives = 102/204 (50.00%), Query Frame = 0 
Query:   38 SLHQSRRSPTATWPMGTWGPIASRRPPTLPNLGMSNKILLSNLAPTVTQSDVIELFSEFGILTSASLHHDHDGKTLGTAEIVFQAPGQAQAAIKKYHGVPLDNRTMNIQFAINDTSNAGAQPPWSARLGLREDQMVPPACNGFRGRPWNNSPQ--FRPPNGQNFKPKGGKKKFKRGPNQLGQNSSLPSAEELDAEMDAYMAEAE 239
            SL  +R    + W    +  +       + N G + K+L+SNL   V+ SD+ ELFSEFG L SA++H+D  G++LG+A+++F+    A  A+K+YHGVPLD R MNIQ A ++   A  + P                     G  +   PQ  FR   G       G ++         Q +  P+AEELDAE++AY+ E +
Sbjct:   66 SLPYTRGDVNSAWKHDMFDGVKKVGRGAIGNAG-TTKLLVSNLDFGVSDSDIQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYHGVPLDGREMNIQVATSELPIASVRGPR------------------LSGVNYTQRPQTRFRGNRGTGSIRGRGSRRGGGRGGGTRQTTKTPTAEELDAELEAYVKEVK 250
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BLAST of tho complex subunit 4 vs. nr
Match: gi|1070588845|ref|XP_018406924.1| (PREDICTED: THO complex subunit 4 [Cyphomyrmex costatus])

HSP 1 Score: 107.071 bits (266), Expect = 2.121e-24
Identity = 68/204 (33.33%), Postives = 102/204 (50.00%), Query Frame = 0 
Query:   38 SLHQSRRSPTATWPMGTWGPIASRRPPTLPNLGMSNKILLSNLAPTVTQSDVIELFSEFGILTSASLHHDHDGKTLGTAEIVFQAPGQAQAAIKKYHGVPLDNRTMNIQFAINDTSNAGAQPPWSARLGLREDQMVPPACNGFRGRPWNNSPQ--FRPPNGQNFKPKGGKKKFKRGPNQLGQNSSLPSAEELDAEMDAYMAEAE 239
            SL  +R    + W    +  +       + N G + K+L+SNL   V+ SD+ ELFSEFG L SA++H+D  G++LG+A+++F+    A  A+K+YHGVPLD R MNIQ A ++   A  + P                     G  +   PQ  FR   G       G ++         Q +  P+AEELDAE++AY+ E +
Sbjct:   68 SLPYTRGDVNSAWKHDMFDGVKKVGRGAIGNAG-TTKLLVSNLDFGVSDSDIQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYHGVPLDGREMNIQVATSELPIASVRGPR------------------LSGVNYTQRPQTRFRGNRGTGSIRGRGSRRGGGRGGGTRQTTKTPTAEELDAELEAYVKEVK 252
The following BLAST results are available for this feature:
BLAST of tho complex subunit 4 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000064556.000e-1536.55supercontig:LSalAtl2s:LSalAtl2s353:12684:13380:-1 ... [more]
EMLSAG000000013473.855e-835.14supercontig:LSalAtl2s:LSalAtl2s1228:18575:23247:1 ... [more]
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BLAST of tho complex subunit 4 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
gi|82236414|sp|Q6GLW1.1|THO4B_XENLA1.097e-1849.33RecName: Full=THO complex subunit 4-B; Short=Tho4-... [more]
gi|48429165|sp|Q86V81.3|THOC4_HUMAN2.127e-1836.14RecName: Full=THO complex subunit 4; Short=Tho4; A... [more]
gi|82230182|sp|Q58EA2.1|THO4A_XENLA2.649e-1848.05RecName: Full=THO complex subunit 4-A; Short=Tho4-... [more]
gi|251765071|sp|B5FXN8.1|THOC4_TAEGU2.727e-1849.33RecName: Full=THO complex subunit 4; Short=Tho4; A... [more]
gi|123915952|sp|Q28FB9.1|THOC4_XENTR3.064e-1849.33RecName: Full=THO complex subunit 4; Short=Tho4; A... [more]
gi|48474242|sp|O08583.3|THOC4_MOUSE3.846e-1849.33RecName: Full=THO complex subunit 4; Short=Tho4; A... [more]
gi|122145089|sp|Q3T0I4.1|THOC4_BOVIN4.774e-1849.33RecName: Full=THO complex subunit 4; Short=Tho4; A... [more]
gi|48474967|sp|Q9JJW6.1|ALRF2_MOUSE1.083e-1631.71RecName: Full=Aly/REF export factor 2; AltName: Fu... [more]
gi|75329749|sp|Q8L773.1|THO4A_ARATH6.439e-1630.81RecName: Full=THO complex subunit 4A; AltName: Ful... [more]
gi|75329741|sp|Q8L719.1|THO4B_ARATH2.605e-1344.00RecName: Full=THO complex subunit 4B; AltName: Ful... [more]

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BLAST of tho complex subunit 4 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1059399449|ref|XP_017772664.1|1.243e-2842.51PREDICTED: THO complex subunit 4-like [Nicrophorus... [more]
gi|752877294|ref|XP_011256074.1|5.053e-2634.63PREDICTED: THO complex subunit 4 [Camponotus flori... [more]
gi|307180346|gb|EFN68372.1|5.257e-2634.63THO complex subunit 4 [Camponotus floridanus][more]
gi|1229711641|ref|XP_022117840.1|3.343e-2539.63THO complex subunit 4-like [Pieris rapae][more]
gi|759054119|ref|XP_011336252.1|3.454e-2535.55PREDICTED: THO complex subunit 4 [Ooceraea biroi] ... [more]
gi|815821906|ref|XP_012232208.1|1.154e-2434.06PREDICTED: THO complex subunit 4 [Linepithema humi... [more]
gi|1130237800|ref|XP_019762555.1|1.563e-2440.24PREDICTED: THO complex subunit 4-A [Dendroctonus p... [more]
gi|304441001|gb|ADM33940.1|1.666e-2434.76ALY [Bombyx mori][more]
gi|1009383875|gb|KYN06420.1|2.053e-2433.33RNA and export factor-binding protein 2 [Cyphomyrm... [more]
gi|1070588845|ref|XP_018406924.1|2.121e-2433.33PREDICTED: THO complex subunit 4 [Cyphomyrmex cost... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold802_size95064supercontigscaffold802_size95064:56441..58992 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold802_size95064-snap-gene-0.17-mRNA-1maker-scaffold802_size95064-snap-gene-0.17-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold802_size95064:56441..58992-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold802_size95064-snap-gene-0.17 ID=maker-scaffold802_size95064-snap-gene-0.17|Name=tho complex subunit 4|organism=Tigriopus kingsejongensis|type=gene|length=2552bp|location=Sequence derived from alignment at scaffold802_size95064:56441..58992- (Tigriopus kingsejongensis)
CGATTATGCAAACCCAAACAACTGGCGTCTCAATTCTTCCGGTCTGAGTC
AAAATCAGTAAACGCCCTGGCCCACGATGTCTGCCTACGTGGACCTGACT
TTGGAGGAGCTGATCAGCAAGAAGAAAATCCCCACAAGGTCTTCCTTCCG
GAAACAAGGAGGTGGGAAGGTTCGCAAATCGTTTCAGAGCCTTCATCAGT
CCAGGCGCTCCCCGACGGCTACTTGGCCCATGGGCACGTGGGGGCCTATT
GCCTCGAGAAGGCCACCGACTTTGCCGAACCTGGGCATGTCCAATAAGAT
ACTGCTGTCGAACTTGGCCCCGACTGTCACTCAATCGGACGTGATCGAGT
TGTTCTCCGAATTTGGCATCCTCACATCAGCCTCTCTGCACCATGGTGGG
TATTCTAACGGATGGGATTATGAGCCCAAATATTATGTGGATTGACTTTG
CATGTTCAATCACCCGGTATCGTATCCACCGGAGGTGATGGGCCCTTAAA
GGTCGCCAATGTAAGGAGTATAAAATATCCCTGTACTCCATGGAACTGCC
TTCCTAGCAGTTAAACGAGGTGTGAAGAAAAGCGCAATGTGGACTTGAAT
AGCGTATTATATATCTGACTATCCCAATAGAATGACCGAGTCCTCCTACC
TAAAAATGGTCGATAACCGGAATCCGGAATGACAAAGTGCAAGTAAAAAT
GGCAAGAAAACAAAAAATGGACATGAGAAATCAGACGGAAAATATAGTGC
ATTCAACAAGAATGTCGGAAATTCAATTTATTAATTTTCTCACATTCTAT
CAAAGTAAGGGGGGGACAAAAGCATGGTAATTAGGCGATACTCAGTTTTT
ACAGGTCCTTGCTTAAGTGTAACAATATTTAAAGACAAAAGACGCTCATT
TCATCTCTTGCGTCCGAAATTTGAGCAAATATTTTTGGGTCAAAAAGGGG
GAGGGAAAAGCGAAAGAGTTCTTCATGCCAAATAGAGCAACATGTTTTGC
TCTACTCGTGCAAGCACACTTTCGGCATCTTTACTCATCACGGAAATCAA
TCGCCAAGGAGACTATACCGTAACACTGTTAATTGTCCTTTTGTATGAAT
TTGCTTACTATGAGGACTGGACCTTGAGAATCAACGCGTGAACTCAGGTG
GACGTCAAAGGCCCGCCTCATTAGGTGTCAAAAATCTGGACATTTTTAAA
CTCGAACCCCATGGGATGTTAAAGAGCTGATTAGTTTAGAGAGGAGGCTC
CATAGGCAATGCCTGGTTGTCATTTTTTACATGGAATGATATCCCTTCAG
AGCAGAATTGTTCCAACTCCCAATCGCTTTTGGTGGGCGAGTGGACGAAC
AAATGAGAATCCCAATTGACTAACGAGTCTGGCCATCTGAGTTGAACCTG
AAAGATAATTTAAAACATTTGCCTTCCAGATCATGATGGAAAAACTCTTG
GAACAGCGGAAATCGTTTTCCAGGTAAGGAACTACAATATTTCTTTTTAT
TTTAGTGGTGTGTATTGTGAGCGAAGGCTCGAGTGGGATGGTACTGACTT
TATTCCCAAGGAATACATGTACTATATAGTGGGTGCTCTACACAAGTAGG
AGCACCTCATCACACGAGCATATCACAGATAGGACGGCCAGACTAAATCC
CTCACATGTATGTGTGTGTAATCCAGCTTATTCAAAGAGGGGAACGCTTT
AGTTGTAACAGCAACTGGTTGGGCAGGGATCATGATTTGTACCATTTGAT
TTTGAAGGGTTGGGAAGGTTTTAAATTATGCTCCCACTCAAAATGGTCCT
AATTTAATACAAATCACAATTTGTCCCAATGGCCCCATCTTTCACACTAG
CATCGTAATCGTTTCATCTTTTTTCATTTTAACTTACATTTTAATTGGCA
CCTTTCAGAATACTGCACCACTTGGGTGCAGTGCAATAATAAACTAATAC
AATACATCTAAATTTGTGGCTAAAAAAGGCCCCTCTCTCGCTTTGCGCTT
CGTGTCCCGTTTGTAAAGAGCTTCATACTTTACTTACAGCCTATTGAACT
CTTTAACTATTGTAGAGATCGTTGTACGCCACTATCTACATTTACCCTGT
CTTCCCCAGGCTCCTGGCCAAGCCCAGGCGGCGATCAAGAAATATCACGG
TGTACCCTTGGACAATCGGACTATGAACATCCAGTTTGCGATCAACGACA
CATCCAATGCAGGTGCTCAACCCCCTTGGTCGGCCCGACTGGGTCTCCGC
GAGGACCAAATGGTCCCTCCCGCCTGTAACGGTTTTAGAGGTCGTCCCTG
GAATAACTCGCCTCAATTCCGCCCACCCAATGGTCAGAATTTCAAACCCA
AGGGAGGCAAAAAGAAATTCAAGCGCGGCCCCAACCAACTGGGCCAAAAT
TCCAGCCTCCCATCGGCCGAGGAACTGGATGCTGAGATGGATGCCTACAT
GGCTGAGGCCGAATAAACTCGCTATTTGTTATGAGCCAAAGTGCGGAGCT
TTGCTCGCGATGTGGGCAAAGTTGTGAAAAATATATTATAATTGATACGC
CA
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Synonyms
The feature 'tho complex subunit 4' has the following synonyms
Synonym
Tk01706
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