protein crumbs isoform x2, maker-scaffold828_size91184-snap-gene-0.13 (gene) Tigriopus kingsejongensis

Overview
Nameprotein crumbs isoform x2
Unique Namemaker-scaffold828_size91184-snap-gene-0.13
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of protein crumbs isoform x2 vs. L. salmonis genes
Match: EMLSAG00000004441 (supercontig:LSalAtl2s:LSalAtl2s231:582105:629669:-1 gene:EMLSAG00000004441 transcript:EMLSAT00000004441 description:"maker-LSalAtl2s231-augustus-gene-6.9")

HSP 1 Score: 101.679 bits (252), Expect = 3.776e-25
Identity = 61/183 (33.33%), Postives = 96/183 (52.46%), Query Frame = 0
Query:   42 RYSREGFFLYGSSYTVTSKTLELRPRTKVGFSFRTCTPGELLSQTGDSLDQLKVRLDEAGRVHFVLSNADQTVNKLAG--AGFLDGLWHTVLIEVGASQEDISLTVTSPNQFEVRAEADRGELGNMLTSMNLN---ASTPQLRVGAGMVACIREGPNVRFTDPDLSINSFGVNWDRCLLPFTC 219
            RY RE F   G+S+  ++ TL   P + + FS RTC PG +LSQ G + D+  + +   G +   +S  + +  +L       LD  WH V I  G     ISL++       V A A   ++ ++L+ ++L      +  LRV  GMVAC+R+GP + F++   +++S GV W  CLLP+ C
Sbjct:   65 RY-REAFAFSGASFIRSNATLSFIPGSTIAFSIRTCVPGTVLSQIGSNFDKATLVILGNGALVLSISVGENSPIRLTSRNVNVLDARWHRVSIATGLIPGSISLSIDG----NVEASAVNEDM-SILSRVDLTRGEGESHPLRVLIGMVACLRQGPGLEFSNNSTAVHSLGVIWGECLLPYQC 241          
BLAST of protein crumbs isoform x2 vs. nr
Match: gi|1325280989|ref|XP_023325166.1| (protein crumbs-like isoform X2 [Eurytemora affinis])

HSP 1 Score: 100.138 bits (248), Expect = 1.448e-20
Identity = 68/205 (33.17%), Postives = 99/205 (48.29%), Query Frame = 0
Query:   34 VGPPLSTPRYSREGFFLYGSSYTVTSKTLELRPRTKVGFSFRTC-TPGELLSQTGDSLDQLKVRLDEAGRVHFVLSNADQTVNKLAGAGFLDGLWHTVLIEVGASQEDISLTVTSPNQFEVRAEADRGELGNMLTSMNLNAST------------------PQLRVGAGMVACIREGPNVRFTDPDLSINSFGVNWDRCLLPFTC 219
            VG  L     + E     GSSY + S  L L   T +GFSFRTC + GELL Q G++ D L + L E   +   +   D   +  +G+   DG WHTV + V  ++  + L+V +       ++ + G    ++T  + N ST                   +LRVG+G++ CIREGP +RFT   +S +S G  W  C LP TC
Sbjct:   28 VGAQLIPTENNSEVLLKNGSSYVILSDNLRLSQGTLLGFSFRTCLSSGELLRQIGETNDLLILSLTETSGIRLTIERGDNRSSIESGSNLADGSWHTVRLGVSQNRTTLCLSVDALGPESECSQPNPGPA--VVTEQSENTSTRLENAESILSSLNLSGSSSELRVGSGLIGCIREGPGLRFTGGRVS-DSVGAEWSHCTLPDTC 229          
BLAST of protein crumbs isoform x2 vs. nr
Match: gi|1325280987|ref|XP_023325164.1| (protein crumbs-like isoform X1 [Eurytemora affinis])

HSP 1 Score: 100.138 bits (248), Expect = 1.449e-20
Identity = 68/205 (33.17%), Postives = 99/205 (48.29%), Query Frame = 0
Query:   34 VGPPLSTPRYSREGFFLYGSSYTVTSKTLELRPRTKVGFSFRTC-TPGELLSQTGDSLDQLKVRLDEAGRVHFVLSNADQTVNKLAGAGFLDGLWHTVLIEVGASQEDISLTVTSPNQFEVRAEADRGELGNMLTSMNLNAST------------------PQLRVGAGMVACIREGPNVRFTDPDLSINSFGVNWDRCLLPFTC 219
            VG  L     + E     GSSY + S  L L   T +GFSFRTC + GELL Q G++ D L + L E   +   +   D   +  +G+   DG WHTV + V  ++  + L+V +       ++ + G    ++T  + N ST                   +LRVG+G++ CIREGP +RFT   +S +S G  W  C LP TC
Sbjct:   28 VGAQLIPTENNSEVLLKNGSSYVILSDNLRLSQGTLLGFSFRTCLSSGELLRQIGETNDLLILSLTETSGIRLTIERGDNRSSIESGSNLADGSWHTVRLGVSQNRTTLCLSVDALGPESECSQPNPGPA--VVTEQSENTSTRLENAESILSSLNLSGSSSELRVGSGLIGCIREGPGLRFTGGRVS-DSVGAEWSHCTLPDTC 229          
BLAST of protein crumbs isoform x2 vs. nr
Match: gi|1238834637|ref|XP_013790082.2| (protein crumbs-like [Limulus polyphemus])

HSP 1 Score: 91.2781 bits (225), Expect = 1.422e-17
Identity = 62/173 (35.84%), Postives = 86/173 (49.71%), Query Frame = 0
Query:   46 EGFFLYGSSYTVTSKTLELRPRTKVGFSFRTCTPGELLSQTGDSLDQLKVRLDEAGRVHFVLSNADQTVNKLAGAGFLDGLWHTVLIEVGASQEDISLTVTSPNQFEVRAEADRGELGNMLTSMNLNASTPQLRVGAGMVACIREGPNVRFTDPDLSINSFGVNWDRCLLPFT 218
            EG+F     Y + S  + L  RT   FSFR+C+PGELL QTG + D L ++L  +G V         T +    +  LD  WH V  ++  +Q+  SLT      F V A        N + S+NL+ + P L +G     CI +GP V  ++P  SI S  VNW+ C LP T
Sbjct:   25 EGYF-EAEGYALLSNVIYLEGRTS--FSFRSCSPGELLHQTGLTGDFLNIQLLNSGAVQLQWHVGQTTDSIFLSSNTLDNKWHDV--DLMKNQD--SLTFHVDQNFVVVANK---TFRNYIFSINLSGNEPSLYIGRNYTGCILQGPGVVLSNP--SIQSISVNWEGCSLPAT 185          
BLAST of protein crumbs isoform x2 vs. nr
Match: gi|675368539|gb|KFM61441.1| (Protein crumb, partial [Stegodyphus mimosarum])

HSP 1 Score: 76.6406 bits (187), Expect = 1.719e-12
Identity = 61/174 (35.06%), Postives = 84/174 (48.28%), Query Frame = 0
Query:   46 EGFFLYGSSYTVTSKTL-ELRPRTKVGFSFRTCTPGELLSQTGDSLDQLKVRLDEAGRVHFVLSNADQTVNKLAGAGFLDGLWHTV--LIEVGASQEDISLTVTSPNQFEVRAEADRGELGNMLTSMNLNASTPQLRVGAGMVACIREGPNVRFTDPDLSINSFGVNWDRCLLP 216
            EGFF   SS  VT  TL ++R RT +  SFRTC+ G+LL Q G + D + + L  +G + F         +   G+  +D  WH V  L  +G+    +SL+VT        +        N +  + L  S P+L VG G   CI +G  V   D   SINS GV W +C LP
Sbjct:   26 EGFF--NSSSHVTLNTLFDVRSRTSL--SFRTCSSGQLLYQEGITGDFIDLTLLPSGSLEFSWRVKRLQHSVRVGSNLIDNHWHDVDLLYRLGS----VSLSVTRNTVLVANSSYQ-----NDIFDLRLEHSQPELIVGRGFTGCILQGAGVVLNDS--SINSSGVIWGKCPLP 184          
BLAST of protein crumbs isoform x2 vs. nr
Match: gi|1009594237|ref|XP_015925985.1| (protein crumbs [Parasteatoda tepidariorum])

HSP 1 Score: 75.0998 bits (183), Expect = 6.247e-12
Identity = 63/205 (30.73%), Postives = 93/205 (45.37%), Query Frame = 0
Query:   21 GLLTLLVLGSMGQVGPPLSTPRYSREGFFLYGSSYTVTSKTLELRPRTKVGFSFRTCTPGELLSQTGDSLDQLKVRLDEAGRVHFVLSNADQTVNKL-----AGAGFLDGLWHTV--LIEVGASQEDISLTVTSPNQFEVRAEADRGELGNMLTSMNLNASTPQLRVGAGMVACIREGPNVRFTDPDLSINSFGVNWDRCLLPFT 218
            G + + +L    Q+   LS      EG+F   SSY   S   ++R RT +  SFRTC+ G+LL Q G++ D + + L  +  + F        VN+L      GA  +D  WH V  + + G      S+T+              G   + L  + L +S PQL VG G   C+ +G  V   D   S+ S+ V+W RC LP T
Sbjct:   14 GTMLVFLLSLSSQIHQILSQ---GPEGYFT-SSSYASLSTMFDVRGRTSL--SFRTCSSGQLLYQEGNTGDFVNMTLLPSDTLEF-----SWQVNRLRHSVTVGANLIDNRWHDVDLIYQTG------SVTLYVSRS---SVVVSNGTHNSDLFDLRLESSHPQLLVGRGFTGCVLQGAGVLLNDS--SVYSYEVDWGRCPLPLT 196          
BLAST of protein crumbs isoform x2 vs. nr
Match: gi|1126218330|ref|XP_019643256.1| (PREDICTED: LOW QUALITY PROTEIN: protein crumbs-like [Branchiostoma belcheri])

HSP 1 Score: 70.4774 bits (171), Expect = 2.166e-10
Identity = 56/186 (30.11%), Postives = 86/186 (46.24%), Query Frame = 0
Query:   34 VGPPLSTPRYSREGFFLYGSSYTVTSKTLELRPRTKVGFSFRTCTPGELLSQTGDSLDQLKVRLDEAGRVHFVLSNA---DQTVNKLAGAGFLDGLWHTVLIEVGASQEDISLTVTSPNQFEVRAEADRGELGNMLTSMNLNASTPQ-LRVGAGMVACIREGPNVRFTDPDLSINSFGVNWDRCLL 215
            V      P  S   FF   +SY V   T+ +R R    FSFRTC  G+LL Q G + D +++ L ++G + F    A    +    L      + +WHTV +E   S  +++L+V    Q  V +    G +      +++N S  + ++VG G+  C+ EGP V+ T      N   V W RC L
Sbjct:   21 VAQTTQAPTPSANAFFNGFNSYAVLPNTINIRSRL-TSFSFRTCNAGQLLRQEGQNGDYIELALLDSGVLRFSFRKAGGRGEDYVDLGSGLTTNQMWHTVNLEY--SVGNLTLSVDG-EQITVASRTVNGYV------LDINLSGGEGVKVGQGLTGCVYEGPGVQLTTATSQSN---VEWGRCRL 193          
BLAST of protein crumbs isoform x2 vs. nr
Match: gi|1316133287|ref|XP_023219824.1| (protein crumbs-like [Centruroides sculpturatus])

HSP 1 Score: 69.3218 bits (168), Expect = 5.917e-10
Identity = 55/170 (32.35%), Postives = 74/170 (43.53%), Query Frame = 0
Query:   49 FLYGSSYTVTSKTLELRPRTKVGFSFRTCTPGELLSQTGDSLDQLKVRLDEAGRVHFVLSNADQTVNKLAGAGFLDGLWHTV--LIEVGASQEDISLTVTSPNQFEVRAEADRGELGNMLTSMNLNASTPQLRVGAGMVACIREGPNVRFTDPDLSINSFGVNWDRCLLP 216
            +L G S  + + T+ L+ RT   FSFRTC+ G LL Q G + D L + L E+G++ F      Q      G    +  WH V  +  VG        T+T    FE    A+     N+   +NL    P L VG     CI +G N+       S N   V WD C LP
Sbjct:   25 YLNGYSPVILNNTISLQERTS--FSFRTCSSGLLLYQKGKNGDFLSLDLKESGQIEFKWKINGQEQTIFGGTKLNNNHWHNVDLIHNVG--------TLTLYIDFESYIVANNTYHSNIF-KINLKDDIPNLYVGYNFSGCILQGINILLNS---STNGNLVQWDICPLP 180          
BLAST of protein crumbs isoform x2 vs. nr
Match: gi|1080055437|ref|XP_018569412.1| (protein crumbs [Anoplophora glabripennis])

HSP 1 Score: 64.3142 bits (155), Expect = 2.475e-8
Identity = 56/179 (31.28%), Postives = 83/179 (46.37%), Query Frame = 0
Query:   41 PRYSREGFFLYGSSYTVTSKTLELRPRTKVGFSFRTCTPGELLSQTGDSLDQLKVRLDEAGRVHFVLSNADQTVNKLAGAGFLDGLWHTVLIEVGASQEDISLTVTSPNQFEVRAEAD-RGELGNMLTSMNL-NASTPQLRVGAGMVACIREGPNVRFTDPDLSINSFGVNWDRCLLPF 217
            P    E +F  GSSY      + L+ +T  G SFRTC  G L SQ  +  D +K+ +D  G + F      +  + +    FLD  WHTV ++        +LT+    +  V A +  R EL   L S  L N     L +G     CI EGP+V F DP++   +  V ++ C +P+
Sbjct:   35 PSNQSEAYF-NGSSYLRLHTIISLKKQT--GLSFRTCYGGSLFSQKQNE-DLIKLAVDSEGII-FSAKTGGKVYDHVILGNFLDNKWHTVYLQYRLG----NLTIDVDGETSVIANSTYRNEL---LVSPGLYNEGAAVLLIGKQFNGCILEGPSVVF-DPNIISPNHNVVFEECPIPY 200          
BLAST of protein crumbs isoform x2 vs. nr
Match: gi|1101332696|ref|XP_018896752.1| (PREDICTED: protein crumbs isoform X2 [Bemisia tabaci])

HSP 1 Score: 64.3142 bits (155), Expect = 2.939e-8
Identity = 53/187 (28.34%), Postives = 86/187 (45.99%), Query Frame = 0
Query:   30 SMGQVGPPLSTPRYSREGFFLYGSSYTVTSKTLELRPRTKVGFSFRTCTPGELLSQ-TGDSLDQLKVRLDEAGRVHFVLSNADQTVNKLAGAGFLDGLWHTVLIEVGASQEDISLTVTSPNQFEVRAEADRGELGNMLTSMNLNASTPQLRVGAGMVACIREGPNVRFTDPDLSINSFGVNWDRCLL 215
            S+    P LS P   REGFF   S   +T   L       +  SF++C  G+L +Q +  +  Q+ + +   G V F+   A +          LD  WHTV +   +   ++S++V+  +Q    A  +  E+  +  + N N   P+  VG G V CI+EGP++       S+ SF V W  C++
Sbjct:   46 SLTSSAPSLSLPH--REGFFNVTSYARLTPIALN----QHIALSFKSCVGGQLFTQRSALNNQQIILEVHREGVV-FIAIVASKRFETRLNVNLLDNTWHTVTLLYRSG--NLSISVSGHSQLIANATFNP-EILKIAFNANDN---PEFLVGKGFVGCIQEGPSIVLNST--SVQSFNVIWGPCIM 217          
BLAST of protein crumbs isoform x2 vs. nr
Match: gi|1101332694|ref|XP_018896671.1| (PREDICTED: protein crumbs isoform X1 [Bemisia tabaci])

HSP 1 Score: 64.3142 bits (155), Expect = 2.943e-8
Identity = 53/187 (28.34%), Postives = 86/187 (45.99%), Query Frame = 0
Query:   30 SMGQVGPPLSTPRYSREGFFLYGSSYTVTSKTLELRPRTKVGFSFRTCTPGELLSQ-TGDSLDQLKVRLDEAGRVHFVLSNADQTVNKLAGAGFLDGLWHTVLIEVGASQEDISLTVTSPNQFEVRAEADRGELGNMLTSMNLNASTPQLRVGAGMVACIREGPNVRFTDPDLSINSFGVNWDRCLL 215
            S+    P LS P   REGFF   S   +T   L       +  SF++C  G+L +Q +  +  Q+ + +   G V F+   A +          LD  WHTV +   +   ++S++V+  +Q    A  +  E+  +  + N N   P+  VG G V CI+EGP++       S+ SF V W  C++
Sbjct:   46 SLTSSAPSLSLPH--REGFFNVTSYARLTPIALN----QHIALSFKSCVGGQLFTQRSALNNQQIILEVHREGVV-FIAIVASKRFETRLNVNLLDNTWHTVTLLYRSG--NLSISVSGHSQLIANATFNP-EILKIAFNANDN---PEFLVGKGFVGCIQEGPSIVLNST--SVQSFNVIWGPCIM 217          
The following BLAST results are available for this feature:
BLAST of protein crumbs isoform x2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000044413.776e-2533.33supercontig:LSalAtl2s:LSalAtl2s231:582105:629669:-... [more]
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BLAST of protein crumbs isoform x2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of protein crumbs isoform x2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 17
Match NameE-valueIdentityDescription
gi|1325280989|ref|XP_023325166.1|1.448e-2033.17protein crumbs-like isoform X2 [Eurytemora affinis... [more]
gi|1325280987|ref|XP_023325164.1|1.449e-2033.17protein crumbs-like isoform X1 [Eurytemora affinis... [more]
gi|1238834637|ref|XP_013790082.2|1.422e-1735.84protein crumbs-like [Limulus polyphemus][more]
gi|675368539|gb|KFM61441.1|1.719e-1235.06Protein crumb, partial [Stegodyphus mimosarum][more]
gi|1009594237|ref|XP_015925985.1|6.247e-1230.73protein crumbs [Parasteatoda tepidariorum][more]
gi|1126218330|ref|XP_019643256.1|2.166e-1030.11PREDICTED: LOW QUALITY PROTEIN: protein crumbs-lik... [more]
gi|1316133287|ref|XP_023219824.1|5.917e-1032.35protein crumbs-like [Centruroides sculpturatus][more]
gi|1080055437|ref|XP_018569412.1|2.475e-831.28protein crumbs [Anoplophora glabripennis][more]
gi|1101332696|ref|XP_018896752.1|2.939e-828.34PREDICTED: protein crumbs isoform X2 [Bemisia taba... [more]
gi|1101332694|ref|XP_018896671.1|2.943e-828.34PREDICTED: protein crumbs isoform X1 [Bemisia taba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold828_size91184supercontigscaffold828_size91184:56885..58616 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold828_size91184-snap-gene-0.13-mRNA-1maker-scaffold828_size91184-snap-gene-0.13-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold828_size91184:56885..58616-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold828_size91184-snap-gene-0.13 ID=maker-scaffold828_size91184-snap-gene-0.13|Name=protein crumbs isoform x2|organism=Tigriopus kingsejongensis|type=gene|length=1732bp|location=Sequence derived from alignment at scaffold828_size91184:56885..58616- (Tigriopus kingsejongensis)
TGAGAAATTCCATGTTTGGAGTGCATGCCAATACACCAACGCCATACACA CTTAAAAAGAAGACCTAACCACGGCTGAGAAGCCTCTCAACTCCAGTGAT TAGAAATATTATGTGCAGTGATCAAGAAGAGAATTGATTTGAATCCCAAA ACCTAATTAGAGTCTTTCCATTCGAGTCCATGCGGTGGGCGAGCTGGAGC CCAAGTGTTAGTGTGAGCCGCCAGCCCTGATCAACATGGTGGTTTTACCC CAACCCGCTCGCTATCGAGGTAAGCCAAAGGACCACCGCTCCTCAAAGCC TTCAATCCCAATTGGGACCCAGTGGACTTAGCCCCGACACTCCAACAGGA GGTCACGGTGGTTTTCCAGCTCCGAGGTCTGCTGTCTTGGGATGCGGATT CGCGGGCCTGCACTGCCTTGGGTCTAACTATTGAAGGAGACACTTGAGAG GCGCTAAATCGCCCGCAACCAACGACTAACAGCGACAAAATCTGTGATGA TTATCGCCATTTCCTATCCGCTCGTTTCCTACTGGGGAAATGGTCGCCTT TTTTTGTTCAAACCAACTTCAATCCAACGACCATTTTCCATCATTTTGGT CCGGAAAGGAAGCAATTCGATCGAGACGCAATTGTCCTGGGCCTGCAATT ACCACCGCTGACCTCAGGTGTCCATATATGCAAAGCATTAGGAAATCATC CTGGGAAAGAGAAATGTGTCCGTCGGTCGAAAGTGTCCCAAGACATTATT CACGTCCAAGCCGAGTCCAATATTGACAGGAAGCTAATCTTCCCTGTATT TGGCCCTTGTTCATGTCGATGTTTGCTCACTTGGCCGGGAGGATTATCTC ACCCAGTGGACGGAGCAATTTAGTGTAGGAGATTTACTTTCTTTTAAGGC TTCTTTCTTCATAAGCCACAAGATGTTCGCCTCGTAGAAATCTATTGATC GCTCGGACAAAAAAACACGAGCATCCGAGATTTTTCCTCGTCAAACCGTG TCTTCGGAGCCCAAGGAAATTGATGGGAACCTTCCCAGGATGTTCAGCTC CCTTAATCGAGCATTGATCAAATCATGGGACACGCGGTATTTCAGTTTGA ATCTCAACTTTCCAGATGCCCTCCTCGTTTTGGGTCTCCTTACCCTCCTG GTCCTAGGCTCGATGGGCCAAGTGGGGCCGCCCTTGAGCACTCCTCGCTA CAGTCGCGAAGGCTTCTTCCTCTATGGATCCTCATACACAGTGACTTCAA AGACATTGGAGTTGAGGCCCAGGACCAAGGTGGGTTTCTCGTTCCGGACG TGCACTCCGGGTGAACTCCTCAGTCAGACGGGCGACAGTCTGGACCAGCT CAAAGTGAGACTGGACGAGGCCGGGCGTGTCCATTTCGTCCTGTCCAATG CCGACCAGACCGTGAACAAACTGGCCGGTGCCGGCTTCCTCGACGGCCTT TGGCACACGGTCCTCATCGAGGTCGGGGCCAGCCAAGAGGACATCTCGCT CACCGTGACCTCGCCCAATCAGTTTGAGGTCCGCGCTGAAGCTGACAGGG GGGAATTGGGCAACATGCTCACCTCCATGAACCTGAACGCAAGCACGCCT CAGCTTCGCGTTGGCGCCGGTATGGTGGCCTGCATTCGGGAAGGCCCCAA TGTGAGATTCACGGATCCGGATCTGAGCATCAATAGCTTTGGAGTCAATT GGGACCGATGCCTGCTGCCATTCACTTGCCAA
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Synonyms
The feature 'protein crumbs isoform x2' has the following synonyms
Synonym
Tk04683
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