isoform r, maker-scaffold831_size90909-snap-gene-0.19 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of isoform r vs. L. salmonis genes
Match: EMLSAG00000012705 (supercontig:LSalAtl2s:LSalAtl2s965:256105:263948:-1 gene:EMLSAG00000012705 transcript:EMLSAT00000012705 description:"maker-LSalAtl2s965-snap-gene-2.9") HSP 1 Score: 160.999 bits (406), Expect = 4.715e-43 Identity = 132/262 (50.38%), Postives = 154/262 (58.78%), Query Frame = 0
Query: 155 SNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDG------DGIPGP---KGDAGPRGPKGEPGLHGSKGERGKRGRKGDK------------GDMGLVGPPGLDAPCPVGPDGLPLP 395
++G PGKNGFPG G+ G KGE +L+ + + Q+LMLKGEPG G GP G QGEPGLPGYDG+QGRPG G KGE G G+ KG+ G V SVGG DFP+AIIEGPPG PG +G PG G DGKPG G P +GIPG GKRGK+GRDG G PG KG+ G G G PGL GSKG++G G G G++G GPPGLDAPCP+GPDGLP+P
Sbjct: 98 ASGLPGKNGFPGPFGIDGPKGE------KLLSL--GFSIDSNQVLMLKGEPGLIGKPGPKGPQGEPGLPGYDGIQGRPGEPGKKGEIGKAGM------------------KGNNGYVLSVGG--GDFPSAIIEGPPGAPGPKGSPGVNGNDGKPGKLGIPGKNGIPGSPGKRGKRGRDGPPGKGEKGYPGQAAMKGNPGDPGKTGIPGLPGSKGQKGDNGESGKNGERGKRGKKGEKGELGSSGPPGLDAPCPLGPDGLPMP 331
BLAST of isoform r vs. L. salmonis genes
Match: EMLSAG00000004352 (supercontig:LSalAtl2s:LSalAtl2s229:218536:238930:1 gene:EMLSAG00000004352 transcript:EMLSAT00000004352 description:"maker-LSalAtl2s229-augustus-gene-2.24") HSP 1 Score: 107.842 bits (268), Expect = 3.931e-24 Identity = 100/238 (42.02%), Postives = 123/238 (51.68%), Query Frame = 0
Query: 151 GSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPK---GDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAP 384
G +G G G G PG G KG+ G+IG PG L+G GAPG GP+G G PG G G G+ G IGP+G G+PG PGN GD G G PG+ G G G G G D +EGP GP G G PG+ G PG G+ GIPG+ GK G+ G+DG+ G+PGP GD G +G +G PG GS G G G +G+ G G GPPG++ P
Sbjct: 1382 GPAGPKGQSGDRGSPGPLGPKGKHGDIGRPGAX----------------GLQGLRGAPGRRGPIGRPGSPGKRGDPGADGKNGDIGPQGLQGLPGPPGNMGDKGPRGEPGQEGNPGMHGPPGPRGDAGKDG----LEGPQGPIGYAGSPGE---RGSPGPSGSRGFQGIPGEPGKPGQPGKDGEAGLPGPSGMMGDQGKQGARGFPGERGSLGPPGPPGVRGETGGTGSDGPPGINGP 1596 HSP 2 Score: 104.375 bits (259), Expect = 5.097e-23 Identity = 109/270 (40.37%), Postives = 132/270 (48.89%), Query Frame = 0
Query: 128 PPGPAGKRGKRGR---KGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELI----DQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLP------GYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD----GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPG 380
P GP GK G GR GL G+ G PG G G PG G G+ G G+ G+IG GL+ + GD P +G PG GP GP G+ G+ GL GY G G G GP G G G+PG PG G+PG GE G G GM+ G GA G PG+RG G PG G G G +DG PG +G +G GR G G+PG +G +GP G KGE G G G G +G+ GD+G G +GP G
Sbjct: 1398 PLGPKGKHGDIGRPGAXGLQGLRGAPGRRGPIGRPGSPGKRGDPGADGKNGDIGPQGLQGLPGPPGNMGDK--GPRGEPGQEGNPGMHGPPGPRGDAGKDGLEGPQGPIGYAGSPGERGSPGPSGSRGFQGIPGEPGKPGQPGKDGEAGLPGPSGMMGDQGKQGAR----------GFPGERGSLGPPGPPGVRGETGGTGSDGPPGINGPKGSPGRKGPPGLVGLPGKRGISGPAGVKGERGSPGKPGPEGPQGKIGDRGPQGTIGPIG 1655 HSP 3 Score: 88.5817 bits (218), Expect = 3.616e-18 Identity = 106/297 (35.69%), Postives = 141/297 (47.47%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGS---------------------------NGTPGKNGFPGEGGLKGQKGEIGSPGL--------------ELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAI--IEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDG-DGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGL 381
PG +GK G G+ G++G G PGS G+ +G+PG +G GE G+KG+ G++G GL + +G PG+ GP GP G G+ G PG G +G+ G IG G G+ GL G PG G G PG PG++GD G G +G P + + GPPG GD+G G+PG++G PGM G P G G+DG G +G G G PG +G GP G + G G GE GK G+ G G+ GL GP G+
Sbjct: 1261 PGQSGKMGPPGKDGVNGEKGSPGSPGAHGPPGFPGPRGKPGLNGSPGPPGPKGLSGSPGSDGPKGESGMKGEMGQMGPRGLPGPTGPAGRRGSRGIRGPSGPPGPLGEPGPPGGRGLPGSDGPAGPKGQSGDRGSPGPLGPKGKHGDIGRPGAXGLQGLRGAPGRRGPIGRPGSPGKRGDPGADGKNGDIG---PQGLQGLPGPPGNMGDKGPRGEPGQEGNPGMHGPPGPRGDAGKDGLEGPQGPIGYAGSPGERGSPGPSGSR---GFQGIPGEPGKPGQPGKDGEAGLPGPSGM 1551 HSP 4 Score: 76.6406 bits (187), Expect = 1.612e-14 Identity = 118/351 (33.62%), Postives = 150/351 (42.74%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGS---------------SGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGP---------------LGPLGNQGEPGLPG------------YDGVQGRPGPIGP------------------KGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFP--TAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD----GIPGPKGDA------------------------------GPRGPKGEPGLHGSKGERGKRGRKGDKGDM---GLVGPPG 380
PGP+G G +G++G G PG GS +GS+G PG NG G G KG G +G PG ++G I P + +G PG PGP +GP+G GE G PG G+ G GP GP KG G PG G G+ G G PGEPG G G++ + G G P + + GPPG PG G G+PGR G G PG GI G G RG +G+ G+ G+PGP+G GP GP G G GS+GERG+ G+ G +G + GL+GPPG
Sbjct: 1546 PGPSGMMGDQGKQGARGFPGERGSLGPPGPPGVRGETGGTGSDGPPGINGPKGSPGRKGPPGLVGLPG-----KRG--ISGPAGVKGERGSPGKPGPEGPQGKIGDRGPQGTIGPIGRPGEVGSPGDHGPPGPAGEPGATGMMGERGPSGPQGLAGFPGPPGIPGPSGSKGSRGFPGGKGLQGNPGPAGGPGEPGPPGLTGLMGAKGSRGESGPRGESGMMGPPGRPGQAGLNGEPGRQGTSGPPG---LHGIKGSSGSRGAEGKRGNPGAPGMPGPEGQKGGVGADGPPGPSGPPGPGGPPGDRGSPGLPGPTGPIGARGPQGSQGERGESGKPGKEGPIGPQGLLGPPG 1886 HSP 5 Score: 76.6406 bits (187), Expect = 1.944e-14 Identity = 113/279 (40.50%), Postives = 133/279 (47.67%), Query Frame = 0
Query: 130 GPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKG--EPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEP------------GSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDG-DGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDGLP 393
GP G G +G +G SG PG PG SG G PGK+G GE G G G G PG K +P PG+ GP G G +GE G G G+ G GP G +G G+ G G PG GEP G G G+ GDRG +G G G PG G +G G PGR G G PG+P G PG DGK G G G G+PGP G+ G +GP+GEPG G+ G G G +GD G GL GP G P+G G P
Sbjct: 1241 GPKGSPGLQGPRGESGKPGGPGQSGKMGPPGKDGVNGEKGSPGSPGAHGPPGFPGPRGKPGLNGSPGPPGPKGLSGSPGSDGPKGESGMKGEMGQMGPRGLPGPTGPAGRRGSRGIRGPSGPPGPLGEPGPPGGRGLPGSDGPAGPKGQSGDRGSPGPLGPKGKHGDI----GRPGAXGLQGLRGAPGRRGPIGRPGSPGKRGDPGADGKNGDIGPQGLQGLPGPPGNMGDKGPRGEPGQEGNPGMHGPPGPRGDAGKDGLEGPQG-----PIGYAGSP 1510 HSP 6 Score: 75.8702 bits (185), Expect = 2.619e-14 Identity = 103/299 (34.45%), Postives = 123/299 (41.14%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMG---------ADFPTAII--EGPPGP------------------PGDRGDPGDPGRDGKP------------------GMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPG 380
PGP+G RG +G G G PG+PG G G PG +G G+ G +G +G G G L + G PG GP G G +G PGL G G +G GP G KGE G PG PG G G+ G G G G G VG G T ++ GP GP G RG PG G G P G G+ G G+ G G GR G G G+ G +G G PGLHG KG G RG +G +G+ G G PG
Sbjct: 1516 PGPSGSRGFQGIPGEPGKPGQPGKDGEAGLPGPSGMMGDQGKQGARGFPGERG-SLGPPGPPGVRGETGGTGSDGPPGINGPKGSPGRKGPPGLVGLPGKRGISGPAGVKGERGSPGKPGPEGPQGKIGDRGPQGTIGPIGRPGEVGSPGDHGPPGPAGEPGATGMMGERGPSGPQGLAGFPGPPGIPGPSGSKGSRGFPGGKGLQGNPGPAGGPGEPGPPGLTGLMGAKGSRGESGPRGESGMMGPPGRPGQA--GLNGEPGRQGTSGPPGLHGIKGSSGSRGAEGKRGNPGAPGMPG 1811 HSP 7 Score: 73.1738 bits (178), Expect = 2.220e-13 Identity = 111/328 (33.84%), Postives = 130/328 (39.63%), Query Frame = 0
Query: 140 RKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGE---PGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGI------------------------------PGQDGKRGKKGRDGD-------GIPGPKGDA---------------------------------GPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLD-APCPVGPDGLP 393
++GL G+PG PG G G PG L G KG +GS G KGE GAPGP+GP G G G G G +G PG G +G G+ G PG PG G+ G PG PG KGD G V G G P G PG PG G G PG+DG G G+P + G PG DG +G+ G G+ G+PGP G A GP GPKG+ G GS G G +G+ GD G G G GL AP GP G P
Sbjct: 1134 KRGLPGMPGLPGPKGHRGFPG---------LDGAKGNVGSSGE-------------------KGEDGAPGPMGPSGPMGPAGPRGERGREGPPGAPGLRGIDGITGPPGEPGSIGKSGPPGFPGIPGAKGDMGSVGPKGSPGLQGPRG-ESGKPGGPGQSGKMGPPGKDGVNGEKGSPGSPGAHGPPGFPGPRGKPGLNGSPGPPGPKGLSGSPGSDGPKGESGMKGEMGQMGPRGLPGPTGPAGRRGSRGIRGPSGPPGPLGEPGPPGGRGLPGSDGPAGPKGQSGDRGSPGPLGPKGKHGDIGRPGAXGLQGLRGAPGRRGPIGRP 1432 HSP 8 Score: 55.0694 bits (131), Expect = 7.965e-8 Identity = 104/299 (34.78%), Postives = 128/299 (42.81%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGT---------PGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPG------LPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPP--------GPPGDRGDPGDPGRDGKPGMPGN---------PATDGIPGQDGKRGKKGRDG-DGIPGPKGDAGPRGPKGE------------------------PGLHGSKGERGKRGRKGDK 370
PG AG G+ GR+G SG PG G GS+G+ PG G PG +GQKG +G+ P G PG GP+G G QG G G G G+ GPIGP+G G PG G G G+PG+PG GR GD+G S G MG+ I P G G+RG G G G PGM G P DG G G +G +G G G+ GP G G +GP+GE PGL G+ G RG +G +G +
Sbjct: 1765 PGQAGLNGEPGRQGTSGPPGLHGIKGSSGSRGAEGKRGNPGAPGMPGP---EGQKGGVGA-DGPPGPSGPPGPGGPPGDRGSPGLPGPTGPIGARGPQGSQGERGESGKPGKEGPIGPQGLLGPPGPSGERGERGEEGPMGKPGAPGIGGRPGDKGPPGSAGLMGSPGGPGIPGPPGKTGPSGPTGERGERGSIGPAGVIGPPGMIGKTGPPGLQGPPGLDGGSGAKGSKGHRGLIGLQGLTGPSGPPGDKGPRGESGTNGKPGEPGPRGPPGLDGAIGPPGLLGAPGPRGSQGEEGKR 2059
BLAST of isoform r vs. L. salmonis genes
Match: EMLSAG00000010332 (supercontig:LSalAtl2s:LSalAtl2s684:19416:35139:1 gene:EMLSAG00000010332 transcript:EMLSAT00000010332 description:"maker-LSalAtl2s684-augustus-gene-0.7") HSP 1 Score: 102.449 bits (254), Expect = 1.824e-22 Identity = 124/326 (38.04%), Postives = 145/326 (44.48%), Query Frame = 0
Query: 130 GPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGK---------------NGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGN--------------PATD-------------GIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDGLP----LPGCGWRKSTEAFPG 408
GPAG+ G G++G SGI G G G G+PG +G PG G +G +GE GS G+ G GPLGP G G+ G PG G +G GP GPKG G PG PGNPG+ G+ G GEPGR G+ G V G G + GP G PG G G PG+ G G+PG PA D G PG G+ G G G G PG G+ GPRG KG+ G G KG RG G G+KGDMG G G P GP GL PG K +E PG
Sbjct: 1020 GPAGQIGLTGKRGESGIKGEMGDHGKVGSPGPSGLPGDPGPPGSKGADGIPGAPGPEGSQGEKGS----------SGAPGFPGPPGTDGKHGIQGPLGPKGEDGKAGAPGSPGARGIMGPEGPKGNPGAPGFPGNPGEQGKQGIKGEPGRPGEDGKVGDAGSPGEPGLRGDV-GPSGSPGKEGPTGPPGKQGNTGLPGEKGDRGPLGPLGETGPAGDQGPPGVEGGPGLRGSPGPAGEVGSSGEMGKPGFPGKPGEIGPRGLKGKRGRRGIKGHRGSIGLSGEKGDMGEKGEHGSKG--PQGPSGLKGETGGPGAXGLKGSEGPPG 1332 HSP 2 Score: 87.0409 bits (214), Expect = 1.106e-17 Identity = 100/254 (39.37%), Postives = 121/254 (47.64%), Query Frame = 0
Query: 135 RGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGY------DGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGL 381
GK G +G G G G +G+ G+PG G G G KG G G PG K +KGEPG PG G +G+ G PG PG G G+ GP GP G+ G GLPG GD G G GE G GD+G G + G PGP G+ G G+ G+ G PG PG G+ G+ G+RG KG G G+ G KGD G +G G G G G +G+ G G G G GPPGL
Sbjct: 1097 DGKHGIQGPLGPKGEDGKAGAPGSPGARGIMGPEGPKGNPGAPGFPGNPGEQGK----------QGIKGEPGRPGEDGKVGDAGSPGEPGLRGDVGPSGSPGKEGPTGPPGKQGNTGLPGEKGDRGPLGPLGETGPAGDQGPPGVEG-------GPGLRGSPGPAGEVGSSGEMGKPGFPGKPGEIGPRGLKGKRGRRGIKGHRGSIGLSGEKGDMGEKGEHGSKGPQGPSGLKGETGGPGAXGLKGSEGPPGL 1333 HSP 3 Score: 75.0998 bits (183), Expect = 5.083e-14 Identity = 95/246 (38.62%), Postives = 113/246 (45.93%), Query Frame = 0
Query: 133 GKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPG------------LPGNPGDSGE---------PGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHG 356
G G +G G G PG PG G G G+ G PGE G G G G PGL +GD V P G PG GP GP G QG GLPG G +G P+GP GE+G G L G+PG +GE PG PG+PG G RG+ G G I G G++GD G+ G G G G G G G G KG +G G+PG +G GP+G +G GL G
Sbjct: 1128 GPEGPKGNPGAPGFPGNPGEQGKQGIKGEPGRPGEDGKVGDAGSPGEPGL-----RGD--VGPS------GSPGKEGPTGPPGKQGNTGLPGEKGDRG---PLGPLGETGPAGDQGPPGVEGGPGLRGSPGPAGEVGSSGEMGKPGFPGKPGEIGPRGLKGKRGRRGIKGHRGSI----GLSGEKGDMGEKGEHGSKGPQGPSGLKGETGGPGAXGLKGSEGPPGLPGLEGPPGPKGTRGTSGLKG 1353 HSP 4 Score: 74.3294 bits (181), Expect = 8.336e-14 Identity = 89/224 (39.73%), Postives = 111/224 (49.55%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLE-LIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPG------LPGYDGVQGRPGP---IGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVG--------GMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD 334
PG G G++G++G+ G PGRPG +G G G PGE GL+G G GSPG E G T L GE G GPLGPLG G G + G G++G PGP +G GE G PG PG PG+ G G G+ GR+G +G S+G G + + +GP G G+ G PG G G G PG P +G PG G RG G G+
Sbjct: 1139 PGFPGNPGEQGKQGIKGEPGRPGE---DGKVGDAGSPGEPGLRGDVGPSGSPGKEGPTGPPGKQGNT-----GLPGEKGDRGPLGPLGETGPAGDQGPPGVEGGPGLRGSPGPAGEVGSSGEMGKPGFPGKPGEIGPRGLKGKRGRRGIKGHRGSIGLSGEKGDMGEKGEHGSKGPQGPSGLKGETGGPGAXGLKGSEGPPGLPGLEGPPGPKGTRGTSGLKGE 1354 HSP 5 Score: 72.7886 bits (177), Expect = 2.360e-13 Identity = 110/297 (37.04%), Postives = 138/297 (46.46%), Query Frame = 0
Query: 147 PGRPGSSGSNGTPGKNGFPGEGGLKGQKGEI-------GSPG------LELIDQKGDYIVTPEQILML---------------KGEPGAPGPLGPLGNQGEPGLPGYDGVQGRP---------GPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPG---------------RDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGP---KGDAGPRGPKGEPGLHGSKGE---RGKRGRKGDKGDMGLVGPPGLDAP 384
PG+PG G +G PG++G G G++G G + GS E+I Q ++ P + L KGE G G +GP G +G G PG +G +GRP GP+GPKGESG+ GLPG PGD G+ G G G+KG G G+ D G PG G RG PG G G GMPGNP G G G +G G +G G PGP KGD G RG GE G+ G +G +G G KGD+G+ G VG PG + P
Sbjct: 348 PGQPGHPGLSGEPGRDGLDGMQGIQGPPGNVLIIPTSMGSTKGPDNSLQEMISQAMTNLIGPRGPMGLTGLPGLTGMIGTSGIKGEEGQQGDMGPRGIRGMVGSPGLEGKRGRPGRDGERGLSGPVGPKGESGIRGLPGLPGDKGDRGYKGSQGQKGSSGPS----GLAGDDGPPGXPGVPGEMGARGFPGPRGFAGLPGPPGKPGLPGLPGSDGMPGNPGNPGNSGSKGSKGPPGHNGPVGFPGPRGVKGDRGERGIHGETGMKGEQGVEGLKGDMGEKGDRGNPGTVGKPGSEGP 640 HSP 6 Score: 70.8626 bits (172), Expect = 9.970e-13 Identity = 109/288 (37.85%), Postives = 131/288 (45.49%), Query Frame = 0
Query: 142 GLSGIPGRPGSSGSNGT---PGKNG---FPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILM-LKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPG---------NPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAII--------EGPPGPPGDRGDPGDPGRDGKPGMPGNP---------------ATDGIPGQDGKRGKKGRDG----------DGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPG 380
G+ G PG PG+SGS G+ PG NG FPG G+KG +GE G G KG+ V + M KG+ G PG +G G++G G G +G +G G IGP GE G G PG + GD G+ GS G PG KG+RG G G +G GP GD G PG G G+PGM G DGI G G+RG G G G PGP GD G G G PG G GE G+ G G +G +G GP G
Sbjct: 558 GMPGNPGNPGNSGSKGSKGPPGHNGPVGFPGPRGVKGDRGERGIHGE--TGMKGEQGVEGLKGDMGEKGDRGNPGTVGKPGSEGPQGAKGSEGPRGEAGAIGPFGEKGKIGPPGFAGYPGGPGDKGDKGQQGSDGTPGLKGERGRDGQPGERGQTGSRGFRGKRGRRGSQGFTGPKGDTGQPGPSGPAGEPGMDGPXGPRGXPGEPGLPGISGKDGIKGPPGERGAPGEQGPTGPTGLIGQSGPPGPSGDTGAVGEPGNPGSPGVPGESGRPGETGKEGPIGAPGPQG 843 HSP 7 Score: 67.781 bits (164), Expect = 9.458e-12 Identity = 115/350 (32.86%), Postives = 142/350 (40.57%), Query Frame = 0
Query: 129 PGPAGKRGKRGR---KGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILML-----------------------------KGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPK---GESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAII--EGPPGPPGDRGDPGDPGRDGKPGMPG------------NPATDGIPGQDGKRGKKGRDGD-------------------GIPGPKGDA---GPRGPKGEPGL------------------------HGSKGERGKRGRKGDKGDMGLV---GPPG 380
PG GKRG+ GR +GLSG G G SG G PG G G+ G KG +G+ GS G + P + G PG PG G G++G G PG++G G PGP G K GE G+ G G G+ G G G+ G KGDRG +VG G++ P EGP G G G G+ G+ G PG G +DG PG G+RG+ G+ G+ G GPKGD GP GP GEPG+ G GERG G +G G GL+ GPPG
Sbjct: 452 PGLEGKRGRPGRDGERGLSGPVGPKGESGIRGLPGLPGDKGDRGYKGSQGQKGSSGPSGLAGDDGPPGXPGVPGEMGARGFPGPRGFAGLPGPPGKPGLPGLPGSDGMPGNPGNPGNSGSKGSKGPPGHNGPVGFPGPRGVKGDRGERGIHGETGMKGEQGVEGLKGDMGEKGDRGNPGTVGKPGSEGPQGAKGSEGPRGEAGAIGPFGEKGKIGPPGFAGYPGGPGDKGDKGQQGSDGTPGLKGERGRDGQPGERGQTGSRGFRGKRGRRGSQGFTGPKGDTGQPGPSGPAGEPGMDGPXGPRGXPGEPGLPGISGKDGIKGPPGERGAPGEQGPTGPTGLIGQSGPPG 801 HSP 8 Score: 62.3882 bits (150), Expect = 4.291e-10 Identity = 100/309 (32.36%), Postives = 122/309 (39.48%), Query Frame = 0
Query: 130 GPAGKRGKRGRKGLSGIP------------GRPGSSGSNGTPGKNGFPGE------------------GGLKGQKGEIGSPGLEL--------IDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-------------------------------GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGD 369
GP G++GK G G +G P G G+ G G G++G PGE G G KG+ G PG + + G+ G GP G G GE G G G+ G+ GP GP G++G G PGNPG G PG G PG G G + + G G G PGPPG G G+ G G PGMPG G G G +G KG+ GD G PGP G G GP+G PG G GE G+ G KG+
Sbjct: 657 GPFGEKGKIGPPGFAGYPGGPGDKGDKGQQGSDGTPGLKGERGRDGQPGERGQTGSRGFRGKRGRRGSQGFTGPKGDTGQPGPSGPAGEPGMDGPXGPRGXPGEPGLPGISGKDGIKGPPGERGAPGEQGPTGPTGLIGQSGPPGPSGDTGAVGEPGNPGSPGVPGESGRPGETGKEGPIGAPGPQGKT-------GKPGPPGILGFVGERGLAGLPGMPGLKGETGPKGPSGPQGDKGQQGDTGNEGPAGQQGRIGPPGGPGIPGAKGGMGIPGFPGPTGRDGVIGPRGLPGPAGPLGEPGEDGAKGE 958 HSP 9 Score: 59.3066 bits (142), Expect = 3.280e-9 Identity = 94/285 (32.98%), Postives = 120/285 (42.11%), Query Frame = 0
Query: 130 GPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGV------------------QGRPGPIG---------------PKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGL 381
G +G +G+ G++G G G G GS G GK G PG G +G G +G G I L G PG G G G+QG+ G G G+ +G PGP G G G+PG PGNPG+SG GS G PG G G PGP G +GD G+ G G+ GM G +G+ G G++G +G PG G G GP+ G GS+G RG+ G G G+ G +GPPG
Sbjct: 426 GTSGIKGEEGQQGDMGPRGIRGMVGSPGLEGKRGRPGRDGERGLSGPVGPKGE-------------SGIRGLPGLPGDKGDRGYKGSQGQKGSSGPSGLAGDDGPPGXPGVPGEMGARGFPGPRGFAGLPGPPGKPGLPGLPGSDGMPGNPGNPGNSGSKGSKGPPGHNGPVGF-------------------PGPRGVKGDRGERGIHGETGMKGEQGVEGLKGDMGEKGDRGN-----PGTVGKPGSEGPQ---GAKGSEGPRGEAGAIGPFGEKGKIGPPGF 670 HSP 10 Score: 59.3066 bits (142), Expect = 3.422e-9 Identity = 105/288 (36.46%), Postives = 125/288 (43.40%), Query Frame = 0
Query: 130 GPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKG---QKGEIGSPGLE----LIDQKGDYIVTP-------------EQILMLKGEPGAPGPLGPLGNQGEPGL------------PGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPC 385
GP G +G G +G +G G G G G PG G+PG G KG Q+G G+PGL+ Q G+ T + KG+ G PGP GP GEPG+ PG G+ G+ G GP GE G PG G G +G G G PG GD G V G PG+ G PG PG G+PG G G PG GK GK G PG G G RG G PG+ G KGE G +G G +GD G G G + P
Sbjct: 639 GPQGAKGSEGPRGEAGAIGPFGEKGKIGPPGFAGYPGGPGDKGDKGQQGSDGTPGLKGERGRDGQPGERGQTGSRGFRGKRGRRGSQGFTGPKGDTGQPGPSGPA---GEPGMDGPXGPRGXPGEPGLPGISGKDGIKGPPGERGAPGEQGPTGPTGLIGQSGPPGPSGDTGAV-------------------GEPGNPGSPGVPGESGRPGETGKEGPIGAPGPQGKTGKP-----GPPGILGFVGERGLAGLPGMPGLKGETGPKGPSGPQGDKGQQGDTGNEGPA 899 HSP 11 Score: 58.5362 bits (140), Expect = 5.606e-9 Identity = 103/277 (37.18%), Postives = 128/277 (46.21%), Query Frame = 0
Query: 128 PPGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGA-DFPTAI----IEGPPGPPGDRGDPGDPGRDGKPG---------------------MPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVG 377
P G G+ G G G +G G PG+ GS G PG++G PGE G++G IG+PG + G+PG PG LG +G +G GLPG G++G GP GP G G G G+ G+ G G G G G G+ + GGMG FP + GP G PG G G+PG DG G G G G G G+KG G G G KG+ GPRG G G G G+RG+ G KG+ GD G VG
Sbjct: 790 PTGLIGQSGPPGPSGDTGAVGEPGNPGSPGVPGESGRPGE---TGKEGPIGAPGPQ----------------GKTGKPGPPGILGFVGERGLAGLPGMPGLKGETGPKGPSGPQGDKGQQGDTGNEGPAGQQGRIGPPGGPGIPGAKGGMGIPGFPGPTGRDGVIGPRGLPGPAGPLGEPGEDGAKGEIGGSGEKGFKGGKGSMGPPGPLGPRGPLGAKGSIGPVGEKGPPGMLGRQGSKGEEGPRGVTGPAGQIGLTGKRGESGIKGEMGDHGKVG 1047
BLAST of isoform r vs. L. salmonis genes
Match: EMLSAG00000007459 (supercontig:LSalAtl2s:LSalAtl2s427:195023:201893:-1 gene:EMLSAG00000007459 transcript:EMLSAT00000007459 description:"augustus_masked-LSalAtl2s427-processed-gene-2.0") HSP 1 Score: 100.523 bits (249), Expect = 6.773e-22 Identity = 133/349 (38.11%), Postives = 160/349 (45.85%), Query Frame = 0
Query: 134 KRGKRGRKGLSGIPGRP------------------GSSGSNGTPGKNGFPGE---GGLKGQKGEIGSPGLE-------LIDQKGDYIVT--------PEQILML--KGEPGAPGPLGPLGN---------QGEPGLPGYD-----------GVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAI--IEGPPGPPGDRGDPGDPGRDGKPGMP---------------GNPATDGIPGQDGKRGKKGRDGD----GIPGPKGDAGPRGPKGEPGLHGSKGERGKR------GRKGDKGDMGLVGPPGLDAPCPVGPDGLP-LPG 396
+ G+ G KG SG+PG+P G+SGS+G PGK+GFPG GL G KGE G GL L KGD + P +I +G+PG PG G GN +GEPGLPG G+ G+ G G G+ G PGLPG PG G PG+PG+ G G G+ G G + +EGP G PG G PG GRDG G P G+ G+PG +G +G G GD G+PG KGD G GP+G+PG G G G R G KGD GD G G PGLD G GLP LPG
Sbjct: 933 EFGREGPKGFSGLPGKPGVPGIRGLDGLPGQKGDKGTSGSSGFPGKDGFPGSPGAPGLNGMKGEFGMNGLPGQDGIPGLPGMKGDTGMRGPDGPRGLPGRIAEKGDRGQPGLPGLQGQDGNPGFDGLTGLKGEPGLPGIGQQGLKGEKGEPGLSGKDGFPGQSGQKGSPGLPGMPGQKGNPGNPGQSGLPGLPGLDGRSGQKGERGLPGLPGLEGPKGNPGFPGKPGLSGRDGASGSPGQKGYPGQSGLSGEKGDTGLPGMPGLNGAKGDMGPQGDTGLTGLPGLKGDRGFSGPQGKPGFPGENGREGPRGMAGIPGEKGDLGDKGNSGXPGLDGIMVKGEKGLPGLPG 1281 HSP 2 Score: 90.8929 bits (224), Expect = 7.526e-19 Identity = 112/254 (44.09%), Postives = 135/254 (53.15%), Query Frame = 0
Query: 130 GPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLEL-IDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDG-DGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGL 381
G G G +G GL+G+PG G G +G GK GFPGE G +G +G G PG + + KG+ +M+KGE G PG G G G PGL G G G PG G +G+ G G G GD G PG PG G+ G GMV + G G + I GD+G PG PG G+ G G P DG+PG G+RG+KG G GIPGP AG RG KG+ GL G G G G KG+ GL GPPGL
Sbjct: 1198 GAKGDMGPQGDTGLTGLPGLKGDRGFSGPQGKPGFPGENGREGPRGMAGIPGEKGDLGDKGNSGXPGLDGIMVKGEKGLPGLPGKQGRSGPPGLMGEKGDDGLPGLDGRQGDKGDRGFNGVKGDRGYPGPPGMRGQPGLNGMVGAKGDYGLPGLSGIK-------GDQGPPGLPGIIGEKGNTGFPGKDGVPGIPGQRGEKGNPGLSGIPGP---AGQRGLKGDVGLPGQFGPPGI---PGPKGNTGLFGPPGL 1438 HSP 3 Score: 89.7373 bits (221), Expect = 1.558e-18 Identity = 110/267 (41.20%), Postives = 130/267 (48.69%), Query Frame = 0
Query: 128 PPGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDY----------IVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDG-DGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDA 383
PPG AG G +G KG SG+PG G G +G GFPGE KG KG G PGL I +GD P + G+ G GP G +G+ G PG PG G +G G GPKG SG+PG PG PG G G PG+ KGD+G S G PG+DG PG PG P +G+ G+ G G G+DG G+PG KGD G RGP G GL G E+G RG+ G G G G PG D
Sbjct: 828 PPGYAGAPGMKGNKGESGLPGLQGEQGRSGP---AGFPGE---KGDKGMEGLPGLNGI--RGDKGNPGPLGPQGPPGPPGPSGIDGQKGNRGPTGRVGSPGMPGRPGMKGDKGEFGREGPKGFSGLPGKPGVPGIRGLDGLPGQ---KGDKGTSGSS-------------------------GFPGKDGFPGSPGAPGLNGMKGEFGMNGLPGQDGIPGLPGMKGDTGMRGPDGPRGLPGRIAEKGDRGQPGLPGLQGQDGNPGFDG 1058 HSP 4 Score: 75.485 bits (184), Expect = 3.743e-14 Identity = 115/328 (35.06%), Postives = 137/328 (41.77%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGR---PGSSGSNGTPGKNGFPGEGG------LKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKG---EPGAPGPLGPLGNQGEPGLPGYDGVQGRPG--------------------------------PIGPKGESG--------------------------VPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGPKGE---PGLHGSKGERGKRGRKGDKGDMGLVGPPGLDA 383
PG G +G+RG G G+PGR PG SG +GTPG G G LKG KG+ GS G + P + KG G+PG GP G +G PG+ GY G GRPG +GPKGE+G + G G G+ GE G PGE G+KGDRG G G I GP GDRG PG G G PG+ G G G +G G G G PG G G +G KGE PGL G +G G G G+KGD G+ G PGL+
Sbjct: 568 PGSLGAKGERGDDGSPGVPGRIGDPGQSGRDGTPGTKGDKGADAIVPDYLLKGPKGDKGSMGFS-------GVPGPPGLSGAKGMDGPSGSPGLPGPKGEKGPPGIDGYPGRNGRPGVMGIQGPPGKPVKGNIGPPGPLGPMGEVGDKGDVGPKGEAGRCPENLALTAGGKGIKGDKGDFGQKGIAGAKGERGEKGERGFPGEIGQKGDRGQPGPFGNPGVSGQKGNI----GPAGDRGYPGSKGDRGIPGL------HGRIGDKGDKGTAGLPGVGPPGYAGAPGMKGNKGESGLPGLQGEQGRSGPAGFPGEKGDKGMEGLPGLNG 878 HSP 5 Score: 70.4774 bits (171), Expect = 1.275e-12 Identity = 86/211 (40.76%), Postives = 108/211 (51.18%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPP---GDRGDPGDPGRDGKPGMP------GNPATDGIPGQDGKRGKKG 330
PG G+ G+ G +G++GIPG G G G +G PG G+ KGE G PGL G+ G GP G +G +G+ GLPG DG QG G G G G G PG PG G+PG G G KGD G+ + G+ D +GPPG P G++G+ G PG+DG PG+P GNP GIPG G+RG KG
Sbjct: 1230 PGFPGENGREGPRGMAGIPGEKGDLGDKGN---SGXPGLDGIM-VKGEKGLPGLP-------------------GKQGRSGPPGLMGEKGDDGLPGLDGRQGDKGDRGFNGVKGDRGYPGPPGMRGQPGLNGMVGAKGDYGL-PGLSGIKGD------QGPPGLPGIIGEKGNTGFPGKDGVPGIPGQRGEKGNPGLSGIPGPAGQRGLKG 1410 HSP 6 Score: 69.3218 bits (168), Expect = 3.173e-12 Identity = 118/287 (41.11%), Postives = 143/287 (49.83%), Query Frame = 0
Query: 130 GPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKG--------QKGEIGSPGLELIDQKGDYIVTPEQIL---MLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPI------------GPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQ---DGKRGKKGRDG-DGIPGPKGDAGPR---GPKGEPGLHGSKGERGK------RGRKGDKGDMGLVGPPG 380
GP G +G++G GLSGI G PG G G+PG G+PG G KG + G G PG + KG+ T E+ + L+G PG PGP+GP+G +G G PG G+ G G G KG+ GVPGL G G GE G PG G KG+RG +G PG PG GDPG GRDG PG G+ D I G +G KG G G+PGP G +G + GP G PGL G KGE+G GR G G MG+ GPPG
Sbjct: 418 GPPGIKGEKGTPGLSGITGSPGQIGEKGSPGDPGYPGSRGQKGLSIPGPRGKDGYNGRPGNAGL--KGERGYTGERGVPGDSLEGTPGPPGPVGPIGEKGRDGQPGRPGLSGGKGDKGFKGGECQLCAPGMKGQKGVPGLNGLDGPPGERGMPGSLGAKGERG----------------DDGSPGVPGRIGDPGQSGRDGTPGTKGDKGADAIVPDYLLKGPKGDKGSMGFSGVPGPPGLSGAKGMDGPSGSPGLPGPKGEKGPPGIDGYPGRNGRPGVMGIQGPPG 686 HSP 7 Score: 65.4698 bits (158), Expect = 4.557e-11 Identity = 103/286 (36.01%), Postives = 122/286 (42.66%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKG------QKGEIG------------------SPGLELIDQKG-DYIVT--PEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPG---------------NPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGD 372
PG G++G+ G GL G G PG G G G GFPG G KG QKGE+G E + G D T P KG+ G G GP+G +GE G GY+G+ G GE G+PG PG GD G G G PGR G +G + EGPPG G++G PG G G PG G + G PG G RG+KG IPGP+G G G PG G KGERG G +G GD
Sbjct: 226 PGAMGQKGEPGLDGLPGSMGNPGVPGPMGIKGDRGFPGRDGPKGNQAPKGQKGEMGLAFYGPKGVPGLPGPPGPPGSYEAVTGSGTDXTATTGPPGQRGEKGDMGERGSPGPMGAKGEKGEFGYNGLNGL------NGEKGLPGHPGPRGREGPFGPPGPAGQKGDQGRDGYDGFPGRAGGKGEAVGGP---GLPGLSGPEGPPGIKGEKGTPGLSGITGSPGQIGEKGSPGDPGYPGSRGQKGLS---IPGPRGKDGY---NGRPGNAGLKGERGYTGERGVPGD 496 HSP 8 Score: 63.929 bits (154), Expect = 1.366e-10 Identity = 111/364 (30.49%), Postives = 138/364 (37.91%), Query Frame = 0
Query: 141 KGLSGIPGRPGSS------------------------------GSNGTPGKNGFPGEGGLKGQKGEIGSPGLE----------------LIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPP-----------------GDRGDPGDPGRDGK-----------------------------PGMPGNPATDGIPGQDGKRGKKGRDG----DGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDGLPLPGCGWRKSTEAFPG 408
KG G PGRPG S G +G PG+ G PG G KG++G+ GSPG+ KG + P+ +L G G G +G G PG PG G +G GP SG PGLPG G+ G PG G PGR G G++ I+GPPG P GD+GD G G G+ G G G PG+ G++G +G+ G G+ G KG+ GP G +G PG G +G G GR GDKGD G G PG+ P G PG K PG
Sbjct: 514 KGRDGQPGRPGLSGGKGDKGFKGGECQLCAPGMKGQKGVPGLNGLDGPPGERGMPGSLGAKGERGDDGSPGVPGRIGDPGQSGRDGTPGTKGDKGADAIVPDYLLK-----GPKGDKGSMGFSGVPGPPGLSGAKGMDGP------SGSPGLPGPKGEKGPPGIDGYPGRNGRPGVMG-------------IQGPPGKPVKGNIGPPGPLGPMGEVGDKGDVGPKGEAGRCPENLALTAGGKGIKGDKGDFGQKGIAGAKGERGEKGERGFPGEIGQKGDRGQPGPFGNPGVSGQKGNIGPAGDRGYPGSKGDRGIPGLHGRIGDKGDKGTAGLPGVGPPGYAG-----APGMKGNKGESGLPG 848 HSP 9 Score: 57.7658 bits (138), Expect = 1.090e-8 Identity = 63/154 (40.91%), Postives = 75/154 (48.70%), Query Frame = 0
Query: 129 PGPAGKRGKR------GRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLE-LIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVG 275
PG GK+G+ G KG G+PG G G G G NG G+ G G G G PGL ++ KGDY G PG G G+QG PGLPG G +G G G+ GVPG+PG G+ G PG G PG G RG+ VG
Sbjct: 1277 PGLPGKQGRSGPPGLMGEKGDDGLPGLDGRQGDKGDRGFNGVKGDRGYPGPPGMRGQPGLNGMVGAKGDY--------------GLPGLSGIKGDQGPPGLPGIIGEKGN---TGFPGKDGVPGIPGQRGEKGNPGLSGIPGPAGQRGLKGDVG 1413 HSP 10 Score: 56.6102 bits (135), Expect = 2.363e-8 Identity = 120/346 (34.68%), Postives = 143/346 (41.33%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELID------------QKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEP---GLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPG--------------RKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKP---------------GMPGNPATDGIPGQDGKRGK---------------KGRDG-DGIPGP---KGDA----------------GPRGPKGEPGLH---GSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDGL 392
PGP G +G+ G +G G G G G G PG NG PG G G KG++G G D + P I +KGEP P G +G +GEP GLPG G G PGP+G KG+ G PG G G+ G GE G G G +V G G D TA GPPG RG+ GD G G P G+ G G+PG G RG+ +GRDG DG PG KG+A G +G KG PGL GS G+ G++G GD G G G GL P P G DG
Sbjct: 134 PGPKGTKGETGPQGTMGYKGDRGKMGVPGYPGVNGVPGLLGPSGPKGDLGRDGCNGTDGLSGGPGMPGLPGPRGFPGLP-GIKGIKGEPAYARP-GAMGQKGEPGLDGLPGSMGNPGVPGPMGIKGDRGFPGRDGPKGNQAPKGQKGEMGLAFYGPKGVPGLPGPPGPPGSYEAVTGSGTDX-TATT----GPPGQRGEKGDMGERGSPGPMGAKGEKGEFGYNGLNGLNGEKGLPGHPGPRGREGPFGPPGPAGQKGDQGRDGYDGFPGRAGGKGEAVGGPGLPGLSGPEGPPGIKGEKGTPGLSGITGSPGQIGEKGSPGDPGYPGSRGQKGLSIPGPRGKDGY 472
BLAST of isoform r vs. L. salmonis genes
Match: EMLSAG00000010726 (supercontig:LSalAtl2s:LSalAtl2s70:521491:527469:-1 gene:EMLSAG00000010726 transcript:EMLSAT00000010726 description:"augustus_masked-LSalAtl2s70-processed-gene-6.0") HSP 1 Score: 91.6633 bits (226), Expect = 2.165e-19 Identity = 139/413 (33.66%), Postives = 163/413 (39.47%), Query Frame = 0
Query: 41 SILLLDQNQSQTINDVFVLRSHLALANAQASMYAEKLLTLQEELVRISLLVTNREESPTGWNVNLGEKQPWLLTRPKRQILGGECNCPPGPAGKRGKRGRKGLSGIPGR------PGSSGSNGTPGKNGFPGEG---GLKGQKGEIGSPGLE----------LIDQKGDY-------------IVTPEQILMLKGEPGAPGPLGPLGNQGEP------GLPGYDGVQGRPGPIGPK---------------GESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPG----------------MPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDA 383
+I+ L Q + LR L + + + + L+ EL N +E G GEK GE G G RG RG KG G PG PG SG G PG++G PG GLKG+KG IGSPG+ L KGD I E L KGEPG PGP+G G+ GE G PG+ G QG PG G K G+ G+ GL G G G PG PG G G +G+ G G D P G G G RG PG GR G G P G PG G G KG G+ GI GP G GP GP G+PG+ G G G GD G GPPGL+
Sbjct: 161 NIVELTQRLEEKSRIESELRKQLQNLELNSKIRNDMIRDLKFELDNARRETFNCDEYNKGAPGERGEK--------------GEI----GAKGPRGHRGEKGFKGPPGARGDRGFPGVSGPPGLPGEHGIPGTDGRPGLKGEKGLIGSPGITGSMGSQGRHGLNGMKGDRGDAGLPGSPGPHGIPGHEGPLGRKGEPGIPGPIGMEGSDGEKGEMGPVGKPGHYGHQGSPGLKGIKGTIGPPGNQGPPGLIGKKGIVGLTGPKGVQGRPGYPGYNGDHGPQGLKGETGMPGEDGPV----GSEGSIGPRGPPGRIGRRGSSGRRVSAYILYFKGLIVSQNTGPGERGQPGYPGVLGPKGDAGEPGIEGPFGXQGPTGPMGQPGVEGPIGS------TGPVGDSGNPGPPGLEG 545 HSP 2 Score: 87.4261 bits (215), Expect = 5.352e-18 Identity = 119/309 (38.51%), Postives = 138/309 (44.66%), Query Frame = 0
Query: 128 PPGPAGKRGKRGRKGLSGIPGRPGSSGSNG---------TPGKNGFPGEGGLKGQKGEI----GSPGLELIDQKGDYIVT-PEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGN----------------------PGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAI-----IEGP---PGPPGDRGDPGDPGRDGK------------PGMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPG 380
P G G G GRKG GIPG G GS+G PG G G GLKG KG I LI +KG +T P+ + G PG G GP G +GE G+PG DG G G IGP+G G G G+ PG+ G+PG PG G KGD G G G PT +EGP GP GD G+PG PG +G+ G G DG G+ G+R G+PGP D GPRGPKG+ G G G GK G G KGD GL G PG
Sbjct: 323 PHGIPGHEGPLGRKGEPGIPGPIGMEGSDGEKGEMGPVGKPGHYGHQGSPGLKGIKGTIGPPGNQGPPGLIGKKGIVGLTGPKGVQGRPGYPGYNGDHGPQGLKGETGMPGEDGPVGSEGSIGPRGPPGRIGRRGSSGRRVSAYILYFKGLIVSQNTGPGERGQPGYPGVLGPKGDAGEPGIEGPFGXQGPTGPMGQPGVEGPIGSTGPVGDSGNPGPPGLEGRQGLPGLPGPRGLRGRRGKRGPDGDSGEIGQR--------GVPGPMSDPGPRGPKGDRGRPGLDG--GKPGEFGKKGDSGLPGVPG 621 HSP 3 Score: 84.3445 bits (207), Expect = 4.540e-17 Identity = 100/270 (37.04%), Postives = 125/270 (46.30%), Query Frame = 0
Query: 133 GKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGL-------ELIDQKGD-------YIVTPEQILML-------KGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRK---------------------GDRGMVSSVGGMGADFPTAIIE-GPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGPKGEPGLHGSKG 359
GK+G G G G+ GRPG G NG G G GE G+ G+ G +GS G I ++G YI+ + +++ +G+PG PG LGP G+ GEPG+ G G QG GP+G G G G G GDSG PG PG GR+ GD G + G P + + GP GP GDRG PG G GKPG G G+PG G+ GIPG G+ G GP+G PG GS G
Sbjct: 394 GKKGIVGLTGPKGVQGRPGYPGYNGDHGPQGLKGETGMPGEDGPVGSEGSIGPRGPPGRIGRRGSSGRRVSAYILYFKGLIVSQNTGPGERGQPGYPGVLGPKGDAGEPGIEGPFGXQGPTGPMGQPGVEGPIGSTGPVGDSGNPGPPGLEGRQGLPGLPGPRGLRGRRGKRGPDGDSGEIGQRG-----VPGPMSDPGPRGPKGDRGRPGLDG--GKPGEFGKKGDSGLPGVPGEM--------GIPGAPGNKGSDGPRGWPGEKGSPG 648
BLAST of isoform r vs. L. salmonis genes
Match: EMLSAG00000007460 (supercontig:LSalAtl2s:LSalAtl2s427:202770:210042:1 gene:EMLSAG00000007460 transcript:EMLSAT00000007460 description:"maker-LSalAtl2s427-augustus-gene-2.11") HSP 1 Score: 87.0409 bits (214), Expect = 1.163e-17 Identity = 116/292 (39.73%), Postives = 137/292 (46.92%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGL---ELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGN---QGEPGLPGYDGVQGRPGPIGPK-----GESGVPGLPGNPGDSGEPGSPGEPGRKGDRG--MVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKP-------------GMPGNPATDGIPGQDGKRGKKGRDGD----------GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAP 384
PGPAG G +G KG SG GRPG G G G+ G PG G++GE+G G+ L ++ V + GE G+PG G GN +GEPG PG GVQGR G G + G+ G G PG PG G G+PG PG +GD G + G G D I PG G RGD G PG G P G G P G+PG DG G KG GD G+ G KG+ G G G G+ G G G RG KG KG MG+ G PG P
Sbjct: 298 PGPAGPVGPKGLKGSSGKYGRPGIPGKEGMIGEQGIPGR---PGRQGEVGPTGIFDPNLAEEGKVGAVGAQGSEGFPGEDGSPGANGLSGNXGLKGEPGEPGTPGVQGRRGIPGIRIKGEAGDDGPKGYPGFPGAKGMKGNPGLPGDQGDEGETVYGPPGLAGXDGSDGI----PGEDGVRGDIGFPGLKGYPGRGRPITGPTGEQGRQGYPGPSGLPGLDGLEGLKGSFGDKGDDCPFCQNGLVGEKGEEGTNGSXGYKGVQGFPGWPGFRGNKGIKGYMGIKGWPGQSGP 582 HSP 2 Score: 85.1149 bits (209), Expect = 3.534e-17 Identity = 101/234 (43.16%), Postives = 123/234 (52.56%), Query Frame = 0
Query: 164 FPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGP---IGPK------GESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKP---GMPGNPATDGIPGQDGKRGKKGRDGDGIPG--PKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMG--LVGPPGL 381
+ GE GL G KGEIG L +KG+ +G+ G G +G G +G G PGY G G+PGP +GPK G+ G PG+PG G GE G PG PGR+G+ VG G P EG G G +G G PG DG P G+ GN G PG+ G G +GR GIPG KG+AG GPKG PG G+KG +G G GD+GD G + GPPGL
Sbjct: 243 YKGEKGLIGYKGEIG-----LYGRKGNQ--------GWEGDRGESGGVGFNGAKGVIGAPGYRGKPGKPGPAGPVGPKGLKGSSGKYGRPGIPGKEGMIGEQGIPGRPGRQGE------VGPTGIFDPNLAEEGKVGAVGAQGSEGFPGEDGSPGANGLSGNXGLKGEPGEPGTPGVQGR--RGIPGIRIKGEAGDDGPKGYPGFPGAKGMKGNPGLPGDQGDEGETVYGPPGL 455 HSP 3 Score: 80.4925 bits (197), Expect = 9.472e-16 Identity = 103/287 (35.89%), Postives = 133/287 (46.34%), Query Frame = 0
Query: 133 GKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPG-LELIDQKGDYIVT-------PEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGES-----------------------------GVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVG--GMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGD---AGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVG 377
G RG+ G G+ G GR G G NG PG G+ G+ G+ G KG G PG + ++GDY P L+G PG PG G +G +GE G G+ G +G G +G +G S GV G+ GN G G PG PG G KG +G + G G+ P ++G PG G G+ G PG G G PG + G DG +G KG GDG G +GD G G G+ GL G +G+RG G G KG+MG +G
Sbjct: 1070 GSRGQNGYFGMPGTTGRKGEMGENGLPGLQGYRGDDGIPGLKGYPGLPGQMGTKGEEGDYGFEGLKGRPGPYGEPGLEGIPGKPGIFGQVGLRGEAGNDGFKGRRGMEGDVGERGLSAGADEGEKGNIGLPGPDGFPGMXGDEGFPGVQGVKGNSGTYGRPGLPGYMGMKGTKGDRGAYGDRGIPGSSPNYKVDGEPGENGRNGNYGRPGLKGMKGKPG------LFGMDGLQGNKGERGDGADGERGDDGFPGIPGXAGQDGLPGYQGDRGDFGMPGLKGEMGRMG 1350 HSP 4 Score: 80.1073 bits (196), Expect = 1.608e-15 Identity = 119/334 (35.63%), Postives = 140/334 (41.92%), Query Frame = 0
Query: 137 KRGRKGLSGIPGRPGSSGSNGTPG---------KNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLK-------------------GEPGAPGPLGPLGNQGEPGLPGY------------------DGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVG----GMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-------GIPGPK------------------GDAGPRGPKGEPGLHGSKGERGKRGRKGD--KGDMGLVGPPGLDAPCPVGPDGLP 393
K+G G+ G PG PG G G PG + GFPG G+ G+ G G PGL + YI+ Q + GE G PG G G+ G PGL GY +G++GRPGP G G G+PG PG G G G G G KG RGM VG GAD G PGP G G GD G G G+ GN T G PG G G KG GD GIPG G G +G KG+PGL G G +G +G +GD G+ G G PG+ P G DGLP
Sbjct: 997 KQGFNGMKGYPGDPGEIGRRGAPGTALQKGETGERGFPGNPGMAGRPGPDGMPGLMGMKGDDAYIIAGNQGIKGSRGQNGYFGMPGTTGRKGEMGENGLPGLQGYRGDDGIPGLKGYPGLPGQMGTKGEEGDYGFEGLKGRPGPYGEPGLEGIPGKPGIFGQVGLRGEAGNDGFKGRRGMEGDVGERGLSAGADEGEKGNIGLPGPDGFPGMXGDEGFPGVQGVKGNSGTYGRPGLPGYMGMKGTKGDRGAYGDRGIPGSSPNYKVDGEPGENGRNGNYGRPGLKGMKGKPGLFGMDGLQGNKGERGDGADGERGDDGFPGI--PGXAGQDGLP 1328 HSP 5 Score: 77.411 bits (189), Expect = 9.090e-15 Identity = 96/276 (34.78%), Postives = 134/276 (48.55%), Query Frame = 0
Query: 133 GKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDY----IVTPEQILMLKGEPGAPGPLGPLGNQG---EPGLPGYDGVQGRPGPIGPKGESGVPG------LPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGD--------------PGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGL 381
G+ G G GL GIPG+PG G G G+ G G G +G +G++G GL +G+ + P+ + G+ G PG G GN G PGLPGY G++G G G G+ G+PG + G PG++G G+ G PG KG +G G ++G G G+RGD PG G+DG PG G+ G+PG G+ G+ G +G + G G++ G PGL+G G G +G GD G G+ G PG+
Sbjct: 1136 GRPGPYGEPGLEGIPGKPGIFGQVGLRGEAGNDGFKGRRGMEGDVGERGLSAGADEGEKGNIGLPGPDGFPGMXGDEGFPGVQGVKGNSGTYGRPGLPGYMGMKGTKGDRGAYGDRGIPGSSPNYKVDGEPGENGRNGNYGRPGLKGMKGKPGLFG----------MDGLQGNKGERGDGADGERGDDGFPGIPGXAGQDGLPGYQGDRGDFGMPGLKGEMGRMGINGPSLRGMNGES------GRPGLYGGPGFEGMKGFMGDPGFPGIPGIPGM 1395 HSP 6 Score: 77.0258 bits (188), Expect = 1.312e-14 Identity = 112/301 (37.21%), Postives = 139/301 (46.18%), Query Frame = 0
Query: 130 GPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLE-LIDQKGDYIVT------------------------------PEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGD---RGDPG---DPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD------GIPGPKGDAGPRGPKGEPGLHGSKGERGK------RGRKGDKGDMGLVGPPGL 381
G G +G G KG GIPGR G GS+G G G+ G LKG G G PG +I GD E L+G+PG PG +G +G +G+ G+PG +G +G PG G +G++G+ GLPG PG G+PG G G G++G G G ++G PG PG+ RG PG G G+ G PGNP G PG DG G G GD G G KG G G G PG G KGE G+ +G +GD G GL G PGL
Sbjct: 820 GQTGNKGAIGPKGDYGIPGRKGYPGSDGIEGSAGYKG---LKGAPGTTGQPGNRGIIGDVGDIRPGYGGVGGPPGRAGLPGIFGDPGAPGTTGEPGKEGFAGLRGDPGTPGRMGLVGLKGKQGIPGSNGREGLPGIKGMQGDNGMQGLPGLPGVIGQPGLVGRMGIDGEKGGPGLFGLPGKQGFNG-MKGYPGDPGEIGRRGAPGTALQKGETGERGFPGNPGMAGRPGPDGMPGLMGMKGDDAYIIAGNQGIKGSRGQNGYFGMPGTTGRKGEMGENGLPGLQGYRGDDGIPGLKGYPGL 1116 HSP 7 Score: 72.0182 bits (175), Expect = 4.108e-13 Identity = 119/334 (35.63%), Postives = 139/334 (41.62%), Query Frame = 0
Query: 143 LSGIPGRPGSSGSNGTPGKNGF---------PGEGGLKGQKGEIGSPGLE-------LIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGE---------------------PGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGR-----------------KGDRGMVSSVGGMGADFPTAII--EGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGL---VGPPGLDAPCPV---------GPDGLPLPGCGWRKSTEAFPG 408
L GI G PG+ G+ G PGK GF PG GL G KG+ G PG + +GD + + + L G G PG +G +G GE PG PG G +G PG KGE+G G PGNPG +G PG G PG KG RG G G + G PG G RGD G PG G PG+PG T G G G G KGR PGP G+ G G G+PG+ G G RG+ G G KG G+ VG GL A GPDG P E FPG
Sbjct: 895 LPGIFGDPGAPGTTGEPGKEGFAGLRGDPGTPGRMGLVGLKGKQGIPGSNGREGLPGIKGMQGDNGM--QGLPGLPGVIGQPGLVGRMGIDGEKGGPGLFGLPGKQGFNGMKGYPGDPGEIGRRGAPGTALQKGETGERGFPGNPGMAGRPGPDGMPGLMGMKGDDAYIIAGNQGIKGSRGQNGYFGMPGTTGRKGEMGENGLPGLQGYRGDDGIPGLKGYPGLPGQMGTKGEEGDYGFEGLKGR-----PGPYGEPGLEGIPGKPGIFGQVGLRGEAGNDGFKGRRGMEGDVGERGLSAGADEGEKGNIGLPGPDGFP-----GMXGDEGFPG 1216 HSP 8 Score: 70.8626 bits (172), Expect = 1.058e-12 Identity = 112/329 (34.04%), Postives = 140/329 (42.55%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGN------QGEPGLPGYDGVQGRPGPIG--PKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGM---VSSVGGMGADFPTAI----------IEGPPGPPGDRGDPGDPGRDGKPGMPGNPATD---------------GIPGQDGKRGKKGRDG-DGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDGLPLPGCGWRKSTEAFPGSGTGIATTDAPG 420
PGP G G G +G G+ G G+SG+ G PG G+ G G KG +G G G I + GEPG G G G +G+PGL G DG+QG G G GE G G PG PG +G+ G PG G +GD GM +G MG + P+ + G PG G +G GDPG G PG+PG G+PG G G+ G G G+PG G G GP+ PGL G G +GK G G G G+ G +PG + FPG G I + PG
Sbjct: 1200 PGPDGFPGMXGDEGFPGVQGVKGNSGTYGRPGLPGYMGMKGTKGDRGAYGDRG----------IPGSSPNYKVDGEPGENGRNGNYGRPGLKGMKGKPGLFGMDGLQGNKGERGDGADGERGDDGFPGIPGXAGQDGLPGYQGDRGDFGMPGLKGEMGRMGINGPSLRGMNGESGRPGLYGGPGFEGMKGFMGDPGFPGIPGIPGMKGXPGYFGPPGLEGLLGKPGLPGSSGLMGQPGEIGSQGVPGAPGFIGQPGPQNMPGLPGVDGFKGKNGDNGRDGFPGIQG----------------VPGTKGKSGDVGFPGEGGAIGSPGIPG 1502 HSP 9 Score: 70.0922 bits (170), Expect = 1.794e-12 Identity = 108/306 (35.29%), Postives = 127/306 (41.50%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGR-------PGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRG-----------MVSSVGGMG-ADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDG-------------------------DGIPGPKGDAGPRGPKGEP----------GLHGSKGERGKRGRKGDKGDMGLVGPPG 380
PG G RG G GL G PGR G G G PG +G PG GL+G KG G D+ D ++ KGE G G G G QG PG PG+ G KG G G+ G PG SG PG G G KG +G + +G +G FP ++G G G G+PG PG G GM G P T G PG+ G G+ G G GI G KG G G KG+P G GSKGE G+ G +KGD G G PG
Sbjct: 465 PGEDGVRGDIGFPGLKGYPGRGRPITGPTGEQGRQGYPGPSGLPGLDGLEGLKGSFG-------DKGDDCPFCQNGLVGEKGEEGTNGSXGYKGVQGFPGWPGFRGN---------KGIKGYMGIKGWPGQSGPPGMSGLEGGKGYKGDQGSLLGLENTIAGEIGDLGVGGFPG--LQGSKGLQGPFGNPGIPGLPGFKGMKGGPGTYGAPGRPGMNGQPGPQGPVGADIYLNPYEITELTGDIGFEGQKGIKGQKGPYGEWGAKGDPMPPSIMASIVGEKGSKGEMGQPGNSNNKGDRGFAGEPG 752 HSP 10 Score: 69.707 bits (169), Expect = 2.182e-12 Identity = 106/296 (35.81%), Postives = 139/296 (46.96%), Query Frame = 0
Query: 130 GPAGKRGKRGRKGLSGIPGRPGSSGSNGT---------PGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEP---GAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPG-----------NPGD----SGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAII---------EGPPGPP------GDRGDPGDPGRDGKPGMPG--NPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPG 380
G G G G KG+ G PG PG G+ G PG++G PG GL+G KG G G L + + I L + G P G+ G GP GN G PGLPG+ G++G PG G G G+ G PG NP + +G+ G G+ G KG +G G G P +I+ +G G P GDRG G+PG G+ G G P G+PG +G G G +G G G +GD+G G +G GL G GERG+ +G G+ G +GP G
Sbjct: 539 GEEGTNGSXGYKGVQGFPGWPGFRGNKGIKGYMGIKGWPGQSGPPGMSGLEGGKGYKGDQGSLLGLE--NTIAGEIGDLGVGGFPGLQGSKGLQGPFGNPGIPGLPGFKGMKGGPGTYGAPGRPGMNGQPGPQGPVGADIYLNPYEITELTGDIGFEGQKGIKGQKGPYGEWGAKGDPMPPSIMASIVGEKGSKGEMGQPGNSNNKGDRGFAGEPGEKGQLGYEGEQGPPQWGLPGLEGYAGDPGINGMIGYLGERGDSGIDGEQGLKGLKGMPGERGRDILRGQTGNKGAIGPKG 832 HSP 11 Score: 62.3882 bits (150), Expect = 3.697e-10 Identity = 88/214 (41.12%), Postives = 110/214 (51.40%), Query Frame = 0
Query: 136 GKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGP 348
G G +G G PG PG +G +G PG G G+ G+ G KGE+G G+ +G + L G PG G G +G+ G PG+PG G++G PG GP G G+ G PG PG SG G PGE G +G G +G G + G PG G +G GD GRDG PG+ G P T G G G G+ G G GIPG +G P GP
Sbjct: 1305 GADGERGDDGFPGIPGXAGQDGLPGYQGDRGDFGMPGLKGEMGRMGINGPSLRG--MNGESGRPGLYGGPGFEGMKGFMGDPGFPGIPGIPGMKGXPGYFGPPGLEGLLGKPGLPGSSGLMGQPGEIGSQGVPGAPGFIGQPGPQ----NMPGLPGVDGFKGKNGDNGRDGFPGIQGVPGTKGKSGDVGFPGEGGAIGSPGIPGRRGSDAPLGP 1512 HSP 12 Score: 60.8474 bits (146), Expect = 1.107e-9 Identity = 96/245 (39.18%), Postives = 108/245 (44.08%), Query Frame = 0
Query: 169 GLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEP--GLPGYDGVQGRPG---PIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD---------------GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDGLP 393
G KG KGE+G PG + KGD GEPG G LG G QG P GLPG +G G PG IG GE G G+ G G G G PGE GR RG + G +G I PG +G PG G +G G G G GQ G RG G GD G+PG GD G G GEPG G G RG G G G +GL G G+ P G +GLP
Sbjct: 725 GEKGSKGEMGQPGNS--NNKGD--------RGFAGEPGEKGQLGYEGEQGPPQWGLPGLEGYAGDPGINGMIGYLGERGDSGIDGEQGLKGLKGMPGERGRDILRGQTGNKGAIGPKGDYGI-------PGRKGYPGSDGIEGSAGYKGLKGAPGTTGQPGNRGIIGDVGDIRPGYGGVGGPPGRAGLPGIFGDPGAPGTTGEPGKEGFAGLRGDPGTPGRMGLVGLKGKQGI--PGSNGREGLP 950 HSP 13 Score: 58.9214 bits (141), Expect = 4.466e-9 Identity = 103/286 (36.01%), Postives = 123/286 (43.01%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGE-----------------SGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDG----------------DGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGL 381
PG G G G +G SGI G G G G PG+ G L+GQ G G+ I KGDY I KG PG+ G G G +G G PG G G G IG G+ G+ G PG PG +GEPG G G +GD G +G +G I PG G G PG G G GM G P G+ GQ G G+ G DG +G+ G GD G G +G PG KGE G+RG G+ G G GP G+
Sbjct: 780 PGINGMIGYLGERGDSGIDGEQGLKGLKGMPGER---GRDILRGQTGNKGA-----IGPKGDY-----GIPGRKGYPGSDGIEGSAGYKGLKGAPGTTGQPGNRGIIGDVGDIRPGYGGVGGPPGRAGLPGIFGDPGAPGTTGEPGKEGFAGLRGDPGTPGRMGLVGLKGKQGI----PGSNGREGLPGIKGMQGDNGMQGLPGLPGVIGQPGLVGRMGIDGEKGGPGLFGLPGKQGFNGMKGYPGDPGEIGRRGAPGTALQKGETGERGFPGNPGMAGRPGPDGM 1048 HSP 14 Score: 56.9954 bits (136), Expect = 1.697e-8 Identity = 99/280 (35.36%), Postives = 118/280 (42.14%), Query Frame = 0
Query: 126 NCPPGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQ------------GEPGLPGYDGVQGRPGPIGPKGESGVPGLP-------GNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPP--GPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDG----DGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPG 380
N G G G G GL G G G G+ G P G PG G+KG G G+PG ++ G PGP GP+G G+ G G G++G+ GP G G G P P G G GE G PG KGDRG G G +GPP G PG G GDPG +G G G GI G+ G +G KG G D + G G+ G GPKG+ G+ G KG G G +G G GL G PG
Sbjct: 606 NTIAGEIGDLGVGGFPGLQGSKGLQGPFGNPGIP---GLPGFKGMKGGPGTYGAPGRPGMN-------------------GQPGPQGPVGADIYLNPYEITELTGDIGFEGQKGIKGQKGPYGEWGAKGDPMPPSIMASIVGEKGSKGEMGQPGNSNNKGDRGFAGEPGEKG-QLGYEGEQGPPQWGLPGLEGYAGDPGINGMIGYLGERGDSGIDGEQGLKGLKGMPGERGRDILRGQTGNKGAIGPKGDYGIPGRKGYPGSDGIEGSAGYKGLKGAPG 862 HSP 15 Score: 53.5286 bits (127), Expect = 1.911e-7 Identity = 116/316 (36.71%), Postives = 143/316 (45.25%), Query Frame = 0
Query: 141 KGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPG-LELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPG--EPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGD-----------------AGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGL------------VGPPGLDAPC-PVGPDGLPLPGCGWRKSTEAFPGSGTGIATTDAPGSP 422
KG++G PG G G G PG+ G G G KGQKG+ GS G + +GD V + G PG G +GP G +G G G +G G PG G G G G+ G PG +GE G G PG KG+RG+ G G D + G G GD G PG PG G+PG G+ D IP + + KG G+ GIPGP+GD G G KGE GL+G KG +G G +G+ G +G G PG P PVGP G L G + PG I PG P
Sbjct: 28 KGVTGHPGLSGMRGQTGPPGEVGPDGPSGPKGQKGDYGSSGNMGEKGIRGDTGVP--GFRGMPGIPGVSGDIGPKGIEGLSGCNGTNGCDGIPGFSGSHGARGPQGIRGFPGIAGEAGDGGLNSPGIKGERGVNGQPGPHGIDGRQSGSTGSKGERGDFGLPGRPGPPGEPGYHGD-FGDTIPNSESYK-YKGEQGEVGIPGPRGDDTITEIVADVSVIYKGEKGLIGYKGEIGLYGRKGNQGWEGDRGESGGVGFNGAKGVIGAPGYRGKPGKPGPAGPVGPKG--LKGSSGKYGRPGIPGKEGMIGEQGIPGRP 337
BLAST of isoform r vs. L. salmonis genes
Match: EMLSAG00000008697 (supercontig:LSalAtl2s:LSalAtl2s53:1054459:1060191:-1 gene:EMLSAG00000008697 transcript:EMLSAT00000008697 description:"maker-LSalAtl2s53-augustus-gene-10.10") HSP 1 Score: 84.7297 bits (208), Expect = 5.518e-17 Identity = 109/332 (32.83%), Postives = 138/332 (41.57%), Query Frame = 0
Query: 138 RGRKGLSGIPGRPGSSGS------------NGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGS---------------PGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPG---------------------------RDGKPGMPGN---------PATDGIPGQDGKRGKKGRDGD-GIP---GPKGDAGPRGP---------------------KGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGL 381
+G +GLSG+PG G G+ +G G++G G G GQ G G PG D + P + PGAPGP G GN G PG+P G +G G G +G+ G PGL G PG G+ G+ PG PG+ G G + G +G +EGPPG PGD G G PG + G+ GMPG P + G PG G +G G+ GD G+P GP+G AGP GP G PG G G RGK+G +G +G G GP GL
Sbjct: 910 KGSEGLSGLPGLDGIPGAKGERGEEGELGLSGKDGRDGSRGPKGDIGQPGPTGLPGRSGRDGQPGPPGIPGALAAGDSVPGAPGPRGQDGNPGSPGIPAAKGERGERGDQGERGDDGSPGLRGKPGPPGKDGTVGERGPPGEGGARGDPGIPGKNGPPGPTGASGAVG----QPGLEGPPGLPGDSGPSGRPGEKGEAGRDGKDGDGGQPGLPGPPGNRGKSGEDGMPGVQGLTGEKGPPGSQGSPGMTGHKGPPGKQGDTGLPGTIGPRGKAGPTGPIGVTGKPGPRGGRGFPGIEGQTGLPGRQGPVGPRGKQGPQGIQGKSGNSGPQGL 1237 HSP 2 Score: 83.9593 bits (206), Expect = 8.985e-17 Identity = 122/396 (30.81%), Postives = 156/396 (39.39%), Query Frame = 0
Query: 126 NCPPGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGK------------------------------NGFPGEGGLKGQKGEIGSPGLE-LIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPG------------------LPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPG------------------EPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRD------------GKPGMPGNPATDGIPGQDGKRGKKGRD-----------------------------------GDGIPGPKGDAGPRGPKGEPGLHGSKGERG------------KRGRKGDKGDMGLVGPPGLDAPCPVGPDGLPLP 395
N PPGP G G G+ GL G PG PG SG +G PG+ +G PG GL G+KG GS G + KG P + +G+ G PG +GP G G G + G G+ GR GP+GP+G+ G G+ G G+SG G PG E + SS G G + + GP GPPG+RG G+ G G PG+ G P G PGQ+GK G+ GR+ G+PG +GPRGP G+PG+ G G+RG G KGD+GD G GPPG+ P+GP G P P
Sbjct: 1064 NGPPGPTGASGAVGQPGLEGPPGLPGDSGPSGRPGEKGEAGRDGKDGDGGQPGLPGPPGNRGKSGEDGMPGVQGLTGEKGPPGSQGSPGMTGHKG----PPGK----QGDTGLPGTIGPRGKAGPTGPIGVTGKPGPRGGRGFPGIEGQTGLPGRQGPVGPRGKQGPQGIQGKSGNSGPQGLPGLPGQSGKPGPPGPPGPPGETITVMPNAISSSNGSPGPEGRQGSM-GPSGPPGERGASGERGPSGGMGMPGIPGSPGSPGISGPPGIQGRPGQNGKDGRPGREYSEEDLRDICASVLRDRLSELTSGLRGPPGPPGRGYRGVPG---KSGPRGPIGDPGIQGEHGQRGFPGLPGMPGPYGSSGPKGDRGDRGDHGPPGIGESGPMGPRGNPGP 1447 HSP 3 Score: 72.4034 bits (176), Expect = 3.437e-13 Identity = 123/339 (36.28%), Postives = 144/339 (42.48%), Query Frame = 0
Query: 124 ECNCPPGPAGKRGKRGRK------GLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELID----QKGDY-IVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPI----------------GPKGESGVPGLPGNP---------------------------GDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRG---------------PKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDGLP 393
E CP GP G +G GR G G PGRPG++G G K GFPG G G+ G GSPGL KG+ + P +G+ G G GP G QG PGLPG G G GP G +G SG+PGL G P GD G+PG G PGR G G G GA A + PG PG R G+DG PG PG PA G G+ G +G++G DG PG +G GP G +G+PG+ G G G G G G GL GPPGL P GP G P
Sbjct: 775 EKTCPAGPPGSQGLPGRGGRPGEVGERGAPGRPGNTGETG---KQGFPGLPGEIGRPGVQGSPGLRGPSGPEGLKGEIGLPGPLGPPGARGKEGPXGKPGPSGEQGRPGLPGQQGKTGERGPAGDITTVVGPVGPPGPKGSEGLSGLPGLDGIPGAKGERGEEGELGLSGKDGRDGSRGPKGDIGQPGPTGLPGRSGRDGQPGPPGIPGA---LAAGDSVPGAPGPR------GQDGNPGSPGIPAAKGERGERGDQGERGDDGS--PGLRGKPGPPGKDGTVGERGPPGEGGARGDPGIPGKNGPPGPTGASGAVGQPGLEGPPGL--PGDSGPSGRP 1097 HSP 4 Score: 61.6178 bits (148), Expect = 7.106e-10 Identity = 100/341 (29.33%), Postives = 124/341 (36.36%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGL------------------------------------------------PGYDGVQGRPGPIGPKGESGVPG---------------LPGNPGDSGEPGSPGEPGRKGDRG----------MVSSVGGMGADFPTAIIE--------------------GPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDG------DGIPGPKGDAGPRGPKG--EPGLHGSKGERGKRGRKG 368
PG G G++G G G PG G G G G G PG G +G+ G G G+ I G PG GP+GP G QG G+ PG +G QG GP GP GE G G PG+PG SG PG G PG+ G G + + D + + GP GP GD G G+ G+ G PG+PG P G G G RG +G G G GP+G+ GP GP+G E G G +G GKRG++G
Sbjct: 1133 PGVQGLTGEKGPPGSQGSPGMTGHKGPPGKQGDTGLPGTIGPRGKAGPTGPIGVTGKPGPRGGRGF-PGIEGQTGLPGRQGPVGPRGKQGPQGIQGKSGNSGPQGLPGLPGQSGKPGPPGPPGPPGETITVMPNAISSSNGSPGPEGRQGSMGPSGPPGERGASGERGPSGGMGMPGIPGSPGSPGISGPPGIQGRPGQNGKDGRPGREYSEEDLRDICASVLRDRLSELTSGLRGPPGPPGRGYRGVPGKSGPRGPIGDPGIQGEHGQRGFPGLPGMPGPYGSSGPKGDRGDRGDHGPPGIGESGPMGPRGNPGPIGPRGVGEQGPMGERGAPGKRGKQG 1472 HSP 5 Score: 54.299 bits (129), Expect = 1.085e-7 Identity = 76/197 (38.58%), Postives = 92/197 (46.70%), Query Frame = 0
Query: 128 PPGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYI---VTPEQILMLKGE---------------PGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDG 306
P GP G+RG G +G SG G PG GS G+PG +G PG G GQ G+ G PG E ++ I V +++ L PG GP GP+G+ G G G G G PG GP G SG G G+ GD G PG GE G G RG +G G G GP G+RG PG G+ G
Sbjct: 1285 PSGPPGERGASGERGPSGGMGMPGIPGSPGSPGISGPPGIQGRPGQNGKDGRPGREYSEEDLRDICASVLRDRLSELTSGLRGPPGPPGRGYRGVPGKSGPRGPIGDPGIQGEHGQRGFPGLPGMPGPYGSSGPKGDRGDRGDHGPPGI-GESGPMGPRGNPGPIGPRGV--------GEQGPMGERGAPGKRGKQG 1472
BLAST of isoform r vs. L. salmonis genes
Match: EMLSAG00000009278 (supercontig:LSalAtl2s:LSalAtl2s593:178144:179871:-1 gene:EMLSAG00000009278 transcript:EMLSAT00000009278 description:"augustus_masked-LSalAtl2s593-processed-gene-1.0") HSP 1 Score: 75.0998 bits (183), Expect = 2.734e-14 Identity = 102/252 (40.48%), Postives = 121/252 (48.02%), Query Frame = 0
Query: 202 KGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGD---------------PGD-----PGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-------------GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGP---------------------PGLDAPCPVGPDGLPLPGCGW 399
KGE G GP+GP G +GE GL G G G G G +G+ G G G PG G+ G GE G GD G +G G P G GDRG+ P D P R+G PG PG P DG PGQ G RG+ G G+ G+PGP G+ G RGP+G GL GS G +G G+KG++GD G +GP GLDAPCP+GPDGLP PGCGW
Sbjct: 293 KGELGPVGPMGPSGEKGEHGLLGKTGKTGPRGVQGFQGKDGDSGPQGPPGLPGQSGPIGEKGEYGDMGPPGLMGPPGLPGPPGYPGSK-GNKGDRGESRMSKKKRRRHGIYGPMDDSEYMPNREGSPGPPGPPGHDGPPGQKGDRGECGLKGELGDKGEIGLSGPMGLPGPMGEVGMRGPEGPSGLPGSIGLQGFDGKKGERGDRGYMGPSGPKGQKGDEGPRGRRGRKGPAGLDAPCPIGPDGLPDPGCGW 543
BLAST of isoform r vs. L. salmonis genes
Match: EMLSAG00000010578 (supercontig:LSalAtl2s:LSalAtl2s702:218313:223892:-1 gene:EMLSAG00000010578 transcript:EMLSAT00000010578 description:"augustus_masked-LSalAtl2s702-processed-gene-1.6") HSP 1 Score: 68.1662 bits (165), Expect = 1.816e-12 Identity = 67/160 (41.88%), Postives = 77/160 (48.12%), Query Frame = 0
Query: 232 PGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD----GIPGPKGDAGPRGPKGEPGLH---GSKGER---GKRGRKGDKGDMGLVGPPGL 381
PG G KGE G PG+ G G G G PG G +G RG + G G + G G PG DG+ G+PG P DGIPG+ G G G DG GIPG G G G KGE G GS+GER G RGR G G+ G G PG+
Sbjct: 111 PGREGKKGEVGNPGVIGEKGKRGRAGRPGSKGSRGHRGAIGPPGPRGPKG-------------ENGAAGLPGLDGRDGLPGEPGLDGIPGRSGLDGLPGVDGTPGTPGIPGHPGIDGKNGVKGEIGSRGPMGSRGERGITGPRGRSGQNGNDGDPGEPGI 257 HSP 2 Score: 60.8474 bits (146), Expect = 4.309e-10 Identity = 70/193 (36.27%), Postives = 82/193 (42.49%), Query Frame = 0
Query: 127 CPPGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGI 319
CPPG GK+G+ G PG G G G+ G PG G +G +G I P KGE GA G G G G PG PG DG+ GR SG+ GLPG G G PG PG PG G G+ +G GP G G+RG G GR G+ G G+P GI
Sbjct: 109 CPPGREGKKGEVGN---------PGVIGEKGKRGRAGRPGSKGSRGHRGAI----------------GPPGPRGPKGENGAAGLPGLDGRDGLPGEPGLDGIPGR---------SGLDGLPGVDGTPGTPGIPGHPGIDGKNGVKGEIGS----------RGPMGSRGERGITGPRGRSGQNGNDGDPGEPGI 257
BLAST of isoform r vs. SwissProt
Match: gi|816380041|sp|A6H584.4|CO6A5_MOUSE (RecName: Full=Collagen alpha-5(VI) chain; AltName: Full=Collagen alpha-1(XXIX) chain; Flags: Precursor) HSP 1 Score: 134.806 bits (338), Expect = 4.331e-31 Identity = 111/285 (38.95%), Postives = 133/285 (46.67%), Query Frame = 0
Query: 125 CNCP--PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGD----RGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDG-DGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDG-LPLPGCGWRK 401
C CP PGP G RG + KG SG G G G +G PG+ GE GL+G +G +G PG +G+ G G G G GE GL G DG +G G G KG+ G PG G PG G G GE G FP G PG PG +G G+ G G+ G+ G T G P G RG +G+ G G G G+ GP+G +G GL GS+G G RG KGDKG G GP G +P P GP G + PG G RK
Sbjct: 1423 CKCPGIPGPHGTRGLQASKGSSGPKGSRGHRGEDGDPGRR---GEIGLQGDRGVVGCPG-------------------TRGQKGVKGFSGAQGEHGEDGLDGLDGEEGFYGFRGGKGQKGDPGNQGYPGIRGAAGEDGEKG-----------------FP-----GDPGDPGKDSNIKGQKGEKGERGRQGITGQKGTHGRPSSKGSRGMEGQRGPQGPSGQAGNPGPQGTQGPEGLQGSQGSSGNRGGKGDKGSQGYQGPQG--SPGPAGPRGDIGRPGFGGRK 1661 HSP 2 Score: 99.7525 bits (247), Expect = 3.711e-20 Identity = 112/320 (35.00%), Postives = 140/320 (43.75%), Query Frame = 0
Query: 123 GECNCPPGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGL--------------------------ELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPG---RDGKPGMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGPKGEPGLHG---------------------SKGERGKRGRKGDKGDMGLVGPPG-----LDAPCPV 387
G CP G RG++G KG SG G G G +G G+ GF G G KGQKG+ G+ G + QKG+ KGE G G G G G P G G++G+ GP GP G++G PG G G G GS G G +G +G S G G +G PGP G RGD G PG R G+PG+PG P G PGQ GK+G G G G G KG GP G G+PG G S+G +G+ G +G +G G GP G + +PC +
Sbjct: 1472 GVVGCP----GTRGQKGVKGFSGAQGEHGEDGLDGLDGEEGFYGFRGGKGQKGDPGNQGYPGIRGAAGEDGEKGFPGDPGDPGKDSNIKGQKGE-----------KGERGRQGITGQKGTHGRPSSKGSRGMEGQRGPQGPSGQAGNPGPQGTQGPEGLQGSQGSSGNRGGKGDKGSQGYQGP-------QGSPGPAGPRGDIGRPGFGGRKGEPGVPGGPGPVGPPGQRGKQGDYGIPGYGQTGRKGVKGPTGFPGDPGQKGDAGNPGIPGGPGPKGFKGLTLSQGLKGRSGLQGSQGPPGRRGPKGTAGQPIYSPCEL 1769
BLAST of isoform r vs. SwissProt
Match: gi|82234134|sp|Q641F3.1|COLA1_XENLA (RecName: Full=Collagen alpha-1(XXI) chain; Flags: Precursor) HSP 1 Score: 123.635 bits (309), Expect = 9.831e-28 Identity = 121/321 (37.69%), Postives = 151/321 (47.04%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLE-------LIDQKGDY----------IVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAII--EGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQD------------------GKRGKKGRDGD----GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPG-LDAPCPVGPDGLPLP-GCGWRKSTEAF 406
PGP GK G +G G GIPG PG G G G G G+ G KG +G G PGL + KGD + G+PG G G G G PG PG G +G+PGP G +G G+PG+PG PG+ G G GE G G+ G G G P I +GP GP G++G+ G PG+ GM G GIPGQ G+RG +G G+ G+PG KG+ G G KGE G G G RG G +G+ G+MGL+G PG G GLP P G ++ +EAF
Sbjct: 472 PGPDGKHGFQGTSGSPGIPGSPGVQGPRGFAGLKGNTGQDGEKGDRGMPGFPGLHGQPGIKGEMGPKGDKGDIGIDGKKGTKGDKGGNGATGKPGRHGEPGSYGKDGIPGYPGQKGEEGKPGPPGMEGLRGLPGIPGIPGNDGANGLKGETGLSGEPGARGPTGTPGISGPEGISGPQGPVGPKGNKGETGPPGKASPAGMKGEKGEMGIPGQQGYTGIPGLMGPKGDKGNLGERGMQGHKGEHGSSGMPGLKGEHGVTGSKGEKGEIGEHGHRGITGPRGEPGNMGLIGAPGPRGMSGERGTQGLPGPKGQQGKEQSEAF 792 HSP 2 Score: 90.8929 bits (224), Expect = 1.499e-17 Identity = 111/317 (35.02%), Postives = 135/317 (42.59%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMG--ADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDG--------------------------------------------------DGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDGLP 393
PGP G G RG L GIPG PG+ G+NG G+ G GE G +G G G G E I V P+ G PG P G G +GE G+PG G G PG +GPKG+ G G G G GE GS G PG KG+ G+ S G G + I GP G PG+ G G PG G M G T G+PG G++GK+ + G PG G G G G+PGL G G +G G+ G KG+ G + P +P GP GLP
Sbjct: 592 PGPPGMEGLRG---LPGIPGIPGNDGANGLKGETGLSGEPGARGPTGTPGISGPEGISGP-QGPVGPKGNKGETGPPGKASPAGMKGEKGEMGIPGQQGYTGIPGLMGPKGDKGNLGERGMQGHKGEHGSSGMPGLKGEHGVTGSKGEKGEIGEHGHRGITGPRGEPGNMGLIGAPGPRG---MSGERGTQGLPGPKGQQGKEQSEAFIRQICLDVLKAQLPSLIQNDIRQNCNQCKTQEGSPGLPGPPGPVGPEGTRGHPGLPGRNGFSGLVGQPGLPGIPGTKGLPGKPGAKGNKGDIEPGPQGSPGVPGPAGLP 901 HSP 3 Score: 86.2705 bits (212), Expect = 3.711e-16 Identity = 93/237 (39.24%), Postives = 107/237 (45.15%), Query Frame = 0
Query: 183 ELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGD---SGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGD------------------PGDPGRDGKPGMPGNPATDGIPGQDGKRGKKG-------RDGDGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDG 391
E ++ D TP + GE G PGP G G G PG PG G G+ G G G G+PG PG G +G G+ G+ G KGDRGM G G I+G GP GD+GD G PGR G+PG G G PGQ G+ GK G R GIPG G+ G G KGE GL G G RG G G G G+ GP G PVGP G
Sbjct: 429 ECLNGPSDVGGTPAPCICPPGEKGDPGPKGDSGQPGNPGSPGQPGPDGKHGFQGTSGSPGIPGSPGVQGPRGFAGLKGNTGQDGEKGDRGMPGFPGLHGQPG----IKGEMGPKGDKGDIGIDGKKGTKGDKGGNGATGKPGRHGEPGSYGKDGIPGYPGQKGEEGKPGPPGMEGLRGLPGIPGIPGNDGANGLKGETGLSGEPGARGPTGTPGISGPEGISGPQG-----PVGPKG 656 HSP 4 Score: 83.9593 bits (206), Expect = 2.035e-15 Identity = 104/284 (36.62%), Postives = 134/284 (47.18%), Query Frame = 0
Query: 128 PPGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGF---PGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSS--------VGGMGADFPTAI----------------------IEGPPGPPGDRGDPGDPGRD------GKPGMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGPKGEPGL--HGSKGERGKRGRKGDK 370
P GP G +G+ G G + G G G G PG+ G+ PG G KG KG +G G++ KG++ + G PG G G G++GE G G G +G GP G G G+ G PG G SGE G+ G PG KG +G S + + A P+ I GP GP G RG PG PGR+ G+PG+PG P T G+PG+ G +G K GD PGP+G G GP G PG+ G G G GR+GD+
Sbjct: 651 PVGPKGNKGETGPPGKASPAGMKGEKGEMGIPGQQGYTGIPGLMGPKGDKGNLGERGMQ--GHKGEHGSS--------GMPGLKGEHGVTGSKGEKGEIGEHGHRGITGPRGEPGNMGLIGAPGPRGMSGERGTQGLPGPKGQQGKEQSEAFIRQICLDVLKAQLPSLIQNDIRQNCNQCKTQEGSPGLPGPPGPVGPEGTRGHPGLPGRNGFSGLVGQPGLPGIPGTKGLPGKPGAKGNK---GDIEPGPQGSPGVPGPAGLPGVGKDGRTGPLGPPGREGDR 921
BLAST of isoform r vs. SwissProt
Match: gi|189082905|sp|A2AX52.2|CO6A4_MOUSE (RecName: Full=Collagen alpha-4(VI) chain; Flags: Precursor) HSP 1 Score: 124.02 bits (310), Expect = 1.144e-27 Identity = 117/301 (38.87%), Postives = 146/301 (48.50%), Query Frame = 0
Query: 130 GPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPG----EG--------GLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPG-DSGEPGSPGEPGRKGDR---GMVSSVGGMGADFPTAII--EGPPGPPGDRGDPGDPGRDGKPGMPGNP---ATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDGLPLPGCGWRKSTEAFPG 408
G G RG++G +GL G+PG PG G +G G G PG EG G +G GE G+PG E + L GE G G GP GE G G G+ G PGP GP+GE G+ G PG+PG D+ G GE GR+G + G +G G+ P + G PG G G+ G+ G G+PG PG G PG G++G G G+ G+PGP G GP GP+G G G GERG RG++G +G GL GPDG PG RK FPG
Sbjct: 1417 GEPGSRGEQGERGLDGLPGHPGEEGDHGQRGPRGLPGLRGEEGCPGVRGPKGARGFSGEKGNPG-------------EEGVGGLDGEQGDRGAAGP---SGEKGSSGSRGLTGLPGPAGPRGEPGLRGDPGDPGIDNLIQGPKGEKGRRGHQGSPGFHGPLGEAGSVGPRGSLGRHGLPGLKGVLGETGELGSRGEPGHPGPQGPRGRQGPPGFFGQKGDPGTQGNPGLPGPSGSKGPDGPRGLKGEVGPAGERGPRGQQGPRGQPGL-----------FGPDGHGYPGRKGRKGEPGFPG 1690 HSP 2 Score: 116.701 bits (291), Expect = 2.278e-25 Identity = 101/265 (38.11%), Postives = 131/265 (49.43%), Query Frame = 0
Query: 130 GPAGKRGKRGRKGLSGIPG------RPGSSGSNGTPG-KNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPG---SPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAP 384
GP+G++G G +GL+G+PG PG G G PG N G G KG++G GSPG G G G +GP G+ G GLPG GV G G +G +GE G PG G G G PG G+PG +G+ G+ G G D P + +G GP G+RG G G G+PG+ G P G PG+ G++G+ PG G G +G G PG G KG +G RG++G+ G GL G PG P
Sbjct: 1498 GPSGEKGSSGSRGLTGLPGPAGPRGEPGLRGDPGDPGIDNLIQGPKGEKGRRGHQGSPGFH-------------------GPLGEAGSVGPRGSLGRHGLPGLKGVLGETGELGSRGEPGHPGPQGPRGRQGPPGFFGQKGDPGTQGNPGLPGPSGSKGPDGPRGL-KGEVGPAGERGPRGQQGPRGQPGLFG-PDGHGYPGRKGRKGE--------PGFPGYPGVQGEDGNPGRGGEKGAKGIRGKRGNSGFPGLAGTPGDQGP 1733 HSP 3 Score: 82.8037 bits (203), Expect = 7.520e-15 Identity = 68/179 (37.99%), Postives = 94/179 (52.51%), Query Frame = 0
Query: 224 GYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDG-DGIPGPKGDAGPRGPKGEPG-------LHGSKGERGKRGRKGDKGDMGLVGPPGLDAPC-PVGPDGLP 393
G DG++G PG G +GE G+ GLPG+PG+ G+ G++G RG+ G G P + GP G G G+ G+PG +G G+ G G G G++G G G G+PGP G G G +G+PG + G KGE+G+RG +G G G +G G P +G GLP
Sbjct: 1411 GDDGIRGEPGSRGEQGERGLDGLPGHPGEEGD------HGQRGPRGLPGLRGEEGC--PG--VRGPKGARGFSGEKGNPGEEGVGGLDGEQGDRGAAGPSGEKGSSGSRGLTGLPGPAGPRGEPGLRGDPGDPGIDNLIQGPKGEKGRRGHQGSPGFHGPLGEAGSVGPRGSLGRHGLP 1579 HSP 4 Score: 77.7962 bits (190), Expect = 2.055e-13 Identity = 64/155 (41.29%), Postives = 81/155 (52.26%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGP-----LGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMG 278
PGP G RG++G G G G PG+ G+ G PG +G G G +G KGE+G G ++G P +G+PG GP G G +GEPG PGY GVQG G G GE G G+ G G+SG PG G PG +G G + + G G
Sbjct: 1600 PGPQGPRGRQGPPGFFGQKGDPGTQGNPGLPGPSGSKGPDGPRGLKGEVGPAG-----ERG-----PRGQQGPRGQPGLFGPDGHGYPGRKGRKGEPGFPGYPGVQGEDGNPGRGGEKGAKGIRGKRGNSGFPGLAGTPGDQGPPGKMGTKGSKG 1744
BLAST of isoform r vs. SwissProt
Match: gi|341940379|sp|Q30D77.2|COOA1_MOUSE (RecName: Full=Collagen alpha-1(XXIV) chain; Flags: Precursor) HSP 1 Score: 122.094 bits (305), Expect = 3.701e-27 Identity = 122/292 (41.78%), Postives = 150/292 (51.37%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKN---GFPGEGGLKGQKGEIGSPGLE-LIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGD---PGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDA----PCPVGPDGLPLPGCGWRKSTEAFPG 408
PGP G+RG RG GL+G G G+ G G GK G PG+ G G++G G PG + L GD V P +G PG G G +G +G PG G G+QG PG G G +G G G PG GEPG+PGE G +G G+ + GG G PG GD+G+ PG G G+PG G P +GI G G+RG+ G+ GD G GP G+AG RGP G G +G KG RG RG G G MG G PG+ GP GLP P K + +PG
Sbjct: 939 PGPKGQRGPRGPDGLAGDQGGHGAKGEKGNQGKRGLPGLPGKAGSPGERGVQGKPGFQGLPGSSGD--VGPAGEPGPRGLPGIAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDGGPAGSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGL----------PGEDGDKGEMGLPGTAGPVGRPGQMGLPGPEGIVGTPGQRGRLGKKGDKGQVGPTGEAGSRGPPGSVGENGPKGARGTRGAVGPLGLMGPEGEPGIPGYRGHQGQPGPSGLPGP-----KGEKGYPG 1213 HSP 2 Score: 102.449 bits (254), Expect = 5.968e-21 Identity = 122/356 (34.27%), Postives = 157/356 (44.10%), Query Frame = 0
Query: 130 GPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGN---------QGEPGLPGYDGVQGR------------PGPIGPKGESGVP------------GLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAII--EGPPGPPGDRGDPGDPGR---DGKPGMP------GNPATDGIPGQDGKRGKKGRDGD--------------------------------GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDGLP-LPGCGWRKSTEAFPG 408
G G+RG +G+ G G+PG G G G PG G PG GL G+ G G PG E GD L+GEPGA G GP G+ +GEPG PG +G+QG+ PG G KGE G+P GLPG G G PG G G+KGD+G V G G+ P + GP G G RG G G +G+PG+P G P G+PG G++G G D G+PG +G G +GP GEPG G +G +G+RG +G +G G+ P P G G+P +PG K + +PG
Sbjct: 982 GSPGERGVQGKPGFQGLPGSSGDVGPAGEPGPRGLPGIAGLPGEMGVEGPPGTE-----GDS--------GLQGEPGAKGDGGPAGSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGEDGDKGEMGLPGTAGPVGRPGQMGLPGPEGIVGTPGQRGRLGKKGDKGQVGPTGEAGSRGPPGSVGENGPKGARGTRGAVGPLGLMGPEGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPPGEPGPMGEQGETGEHGEEGYKGHMGVPGLRGATGQQGPPGEPGDQGGQGPKGERGSEGPQGKRGV--------PGPSGKPGIPGVPGFPGPKGLQGYPG 1316 HSP 3 Score: 99.3673 bits (246), Expect = 4.304e-20 Identity = 126/328 (38.41%), Postives = 156/328 (47.56%), Query Frame = 0
Query: 126 NCPPGPAGKRGKR---------GRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDY--IVTPEQILML-----KGEPGAPGPLGPLGNQG---------------EPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD----GIPGPKGDAGPR---------GPKGEPGLHGSKGERGKRGRK------------GDKGDMGLVGPPGLDAPCPVG-PDGLPLPG 396
N P GP G G R G +G G G G GS G PG+ G+ GE G +G KGE+G G I + G+ + P ++ + KGE G+PGPLGP G +G GLPG G +G PG GPKG+ G G G GD G G+ GE G +G RG+ G G+ ++G PG G G GD G G+PG G P G+PG+ G G G +GD G PG KGD GP GP+GEPG G +G +GK G K GDKG+MGL G G PVG P + LPG
Sbjct: 801 NGPEGPKGHLGNRGPPGPPGLKGTQGEEGPIGPFGELGSRGKPGRKGYMGEPGPEGLKGEVGDQG--DIGKTGETGPVGLPGEVGITGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGAPGPMGPLGLPGLVGARGAPGSPGPKGQRGPRGPDGLAGDQGGHGAKGEKGNQGKRGLPGLPGKAGSPGERG-VQGKPGFQGLPGSSGDVGPAGEPGPRGLPGIAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDGGPAGSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGEDGDKGEMGLPGTAG-----PVGRPGQMGLPG 1120 HSP 4 Score: 96.2857 bits (238), Expect = 4.676e-19 Identity = 119/340 (35.00%), Postives = 147/340 (43.24%), Query Frame = 0
Query: 128 PPGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPI---GPKGESGVP-------------------------------------GLPGNPGDSGEPGSPGEPGR------KGDRGMVSSVGGMGADFPTAI--IEGPPGPPGDRGDPGDPGRD------GKPGMPGNPATDGIPGQDGKRGKKGRDG----------------------DGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDG 391
P G G+ G G +G+ G PG+ G G G G+ G GE G +G G +G G KG +G GA GPLG +G +GEPG+PGY G QG+PGP GPKGE G P G+PG G +G+ G PGEPG KG+RG G G P+ I G PG PG +G G PG D GKPG+PG G+PG G+ G G G G+PG G G RG +G PG G +G G +G+ G+ GD GL G G P P GP+G
Sbjct: 1109 PVGRPGQMGLPGPEGIVGTPGQRGRLGKKGDKGQVGPTGEAGSRGPPGSVGENG-----PKG-----------ARGTRGAVGPLGLMGPEGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPPGEPGPMGEQGETGEHGEEGYKGHMGVPGLRGATGQQGPPGEPGDQGGQGPKGERGSEGPQGKRGVPGPSGKPGIPGVPGFPGPKGLQGYPGVDGMSGYPGKPGLPGKQGLLGVPGSPGRTGVAGSPGPQGGKGASGPPGSPGAPGPKGEQGLPGQPGVPGQRGHRGTPGDQGLRGAPGLKGQPGEHGDQGLAGFQGF--PGPRGPEG 1430 HSP 5 Score: 87.8113 bits (216), Expect = 1.722e-16 Identity = 97/235 (41.28%), Postives = 122/235 (51.91%), Query Frame = 0
Query: 141 KGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMG 374
KG G+PG G++G G PG+ PG+ G +G KGE GS G + G+ G PGP G G G PG PG G+QG P G G SG PG PG PG G G PG PGR G G GG GA G PGP G++G PG PG G+ G G P G+ G G +G+ G GD G+ G +G GPRGP+G+ G+ G G +G G++G+ G +G
Sbjct: 1246 KGHMGVPGLRGATGQQGPPGE---PGDQGGQGPKGERGSEGPQ-------------------GKRGVPGPSGKPGIPGVPGFPGPKGLQGYP---GVDGMSGYPGKPGLPGKQGLLGVPGSPGRTGVAGSPGPQGGKGASG-PPGSPGAPGPKGEQGLPGQPGVPGQRGHRGTPGDQGLRGAPGLKGQPGEHGDQGLAGFQGFPGPRGPEGDAGIVGIVGPKGPIGQRGNTGPLG 1454 HSP 6 Score: 85.5001 bits (210), Expect = 9.939e-16 Identity = 110/265 (41.51%), Postives = 134/265 (50.57%), Query Frame = 0
Query: 130 GPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMG-ADFPTAI-IEGPPGPPGDRGDPGDPGRDGKPGM---------PGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGP---KGEPGLHGSKGERGKRGRKGDKGDMGLVGPPG 380
GP+G +G +G +G++G PG PG G G G G PG G G G+ G PG + P I + G+ G GP G LGN+G PG PG G QG GPIGP GE G G PG G GEPG G G GD+G + G G P + I G G G+RG PG G G+ G+ PG G+PG G RG G PGPKG GPRGP G+ G HG+KGE+G +G++G G G G PG
Sbjct: 727 GPSGIKGDKGEQGVAGEPGEPGYPGDKGNIGSPGPPGIRGKSGPSGQPGDPGPQGPSGPPGPEGFPGDI-GIPGQNGPEGPKGHLGNRGPPGPPGLKGTQGEEGPIGPFGELGSRGKPGRKGYMGEPGPEGLKGEVGDQGDIGKTGETGPVGLPGEVGITGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGAPGPMGPLGLPGLVGARGAPGS-----PGPKGQRGPRGPDGLAGDQGGHGAKGEKGNQGKRGLPGLPGKAGSPG 985 HSP 7 Score: 83.9593 bits (206), Expect = 2.968e-15 Identity = 107/288 (37.15%), Postives = 136/288 (47.22%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILML--KGEPGAPGPLGPLGNQGEPGLPGYDG------VQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPP------------------GDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGD---------AGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPG 380
PGP G+ G G +GL G G G+ G +G PG++G GE GL G G +G PG + + TP Q L KG+ G GP G G++G PG G +G +G GP+G G G PG+PG G G+PG G PG KG++G G D GPPG P G G PG G G+ G PG P G G G+RG +G G G+PGP G GP+G +G PG+ G G GK G G +G +G+ G PG
Sbjct: 1062 PGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGEDGDKGEMGLPGTAGPVGRPGQMGLPGPEGIVGTPGQRGRLGKKGDKGQVGPTGEAGSRGPPGSVGENGPKGARGTRGAVGPLGLMGPEGEPGIPGYRGHQGQPGPSGLPGPKGEKGYP------GEDSTVLGPPGPPGEPGPMGEQGETGEHGEEGYKGHMGVPGLRGATGQQGPPGEPGDQGGQGPKGERGSEGPQGKRGVPGPSGKPGIPGVPGFPGPKGLQGYPGVDGMSGYPGKPGLPGKQGLLGVPGSPG 1343 HSP 8 Score: 78.1814 bits (191), Expect = 1.787e-13 Identity = 95/252 (37.70%), Postives = 118/252 (46.83%), Query Frame = 0
Query: 154 GSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGN------PGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFP-----TAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNP-------------ATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGL 381
G G PG +G PG GL G KG G PGL +P Q GE G PG LG + G PGL G G++G PG G +GE G+PGL GN PG G G G PG KG RG + S G +G P T + G GP G +G PGD G G G+ G+P T + G+ G +G +G +G KGE G+ GE G+ G GDKG++G GPPG+
Sbjct: 532 GPRGIPGPHGNPGLPGLPGPKGPKGDPGL-----------SPGQ--AASGEKGDPGLLGLV---GPPGLQGAKGLKGHPGLPGLRGEHGLPGLAGNIGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPGEVGQLGPEGERGTPGVRGKKGPKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGVTGSVGPAGPTGPPGAPGPMGLSGSRGPSGIKGDKGEQGV---AGEPGEPGYPGDKGNIGSPGPPGI 764 HSP 9 Score: 70.4774 bits (171), Expect = 3.877e-11 Identity = 106/302 (35.10%), Postives = 127/302 (42.05%), Query Frame = 0
Query: 128 PPGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAII-----------EGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD----------------------GIPGPKGDAGP---------------RGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGL 381
PPG G +G +G GL G+ G G G G G G+PG GL G +G GS G ++G G+PG +G LG +GE G PG G + GPKG G PG G+ G +G GSPG G G G G +G PT GP G GD+G+ G G G+PG PG+ G PG G RGK G G GIPG G GP +G +GE G G GE G RG+ G KG MG GP GL
Sbjct: 581 PPGLQGAKGLKGHPGLPGLRGEHGLPGLAGNIGSPGYPGRQGLAGPEGNPGSKG-------------------VRGFIGSPGEVGQLGPEGERGTPGVRGKK------GPKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGVTGSVGPAGPTGPPGAPGPMGLSGSRGPSGIKGDKGEQGVAGEPGEPGYPGDKGNIGSPGPPGIRGKSGPSGQPGDPGPQGPSGPPGPEGFPGDIGIPGQNGPEGPKGHLGNRGPPGPPGLKGTQGEEGPIGPFGELGSRGKPGRKGYMGEPGPEGL 857 HSP 10 Score: 68.1662 bits (165), Expect = 2.261e-10 Identity = 83/180 (46.11%), Postives = 99/180 (55.00%), Query Frame = 0
Query: 209 GPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPG-SPGEP--GRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGD---MGLVGPPGL 381
GP GP G G PG G G +G P GP G G+PGLPG G G+PG SPG+ G KGD G++ VG G ++G PG PG RG+ G PG G G PG P G+ G +G G KG G G PG G GP G +G PG+ G KG +G++G GD GD GL G PGL
Sbjct: 514 GPPGPPGPMGIPGPSGKRGPRGIP---GPHGNPGLPGLPGPKGPKGDPGLSPGQAASGEKGDPGLLGLVGPPGLQGAKG-LKGHPGLPGLRGEHGLPGLAGNIGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPGEVGQLGPEGERGTPGVRGKKGPKGRQGFPGDFGDRGPAGLDGSPGL 689
BLAST of isoform r vs. SwissProt
Match: gi|74752071|sp|Q96P44.1|COLA1_HUMAN (RecName: Full=Collagen alpha-1(XXI) chain; Flags: Precursor) HSP 1 Score: 121.324 bits (303), Expect = 5.445e-27 Identity = 120/326 (36.81%), Postives = 151/326 (46.32%), Query Frame = 0
Query: 125 CNCPPGPAGKRGKRGRKGL------------------------SGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLE-------LIDQKGD------YIVTPEQILMLK-GEPGAPGPLGPLGNQGE------PGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGM------------PGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGL---HGSKGERGKRGRKGDKGDMGLVGPPGLDAPC-PVGP 389
C CPPG G +G +G GL G+PG PG G+ G PG G PG G KG +G G PGL + KGD Y + G PG PGP G G G+ PG G G G PG G +GE G+PG PGN G G+ G G PG++G +G G MG++ G PG PG +G G+PG G PG PG P G+PG GK+G KG G+ GI G KG+ G +G G+ G+ HG+KGERG++G G +G +G G G+D P GP
Sbjct: 444 CICPPGKPGLQGPKGDPGLPGNPGYPGQPGQDGKPGYQGIAGTPGVPGSPGIQGARGLPGYKGEPGRDGDKGDRGLPGFPGLHGMPGSKGEMGAKGDKGSPGFYGKKGAKGEKGNAGFPGLPGPAGEPGRHGKDGLMGSPGFKGEAGSPGAPGQDGTRGEPGIPGFPGNRGLMGQKGEIGPPGQQGKKGAPGMPGLMGSNGSP----GQPGTPGSKGSKGEPGIQGMPGASGLKGEPGATGSPGEPGYMGLPGIQGKKGDKGNQGEKGIQGQKGENGRQGIPGQQGIQGHHGAKGERGEKGEPGVRGAIGSKGESGVDGLMGPAGP 765 HSP 2 Score: 92.4337 bits (228), Expect = 5.021e-18 Identity = 94/240 (39.17%), Postives = 112/240 (46.67%), Query Frame = 0
Query: 183 ELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDR------------GMVSSVGGMGAD--------------FPTAIIEGPPGPPGDRGDPGDPGRD---GKPGMPGNPATDGIPGQDGKRGKKGRDG----DGIPGPKGDAGP---RGPKGEPGL------HGSKGERGKRGRKGDKGDMGLVGPPG 380
E ++ D TP + G+PG GP G G G PG PG G G+PG G G GVPG PG G G PG GEPGR GD+ GM S G MGA G PG PG G+PG G+D G PG G + G PGQDG RG+ G G G+ G KG+ GP +G KG PG+ +GS G+ G G KG KG+ G+ G PG
Sbjct: 429 ECLNGPSDVGSTPAPCICPPGKPGLQGPKGDPGLPGNPGYPGQPGQDGKPGYQGIAGTPGVPGSPGIQGARGLPGYKGEPGRDGDKGDRGLPGFPGLHGMPGSKGEMGAKGDKGSPGFYGKKGAKGEKGNAGFPGLPGPAGEPGRHGKDGLMGSPGFKGEAGSPGAPGQDGTRGEPGIPGFPGNRGLMGQKGEIGPPGQQGKKGAPGMPGLMGSNGSPGQPGTPGSKGSKGEPGIQGMPG 668 HSP 3 Score: 59.6918 bits (143), Expect = 7.002e-8 Identity = 124/315 (39.37%), Postives = 143/315 (45.40%), Query Frame = 0
Query: 128 PPGPAGKRGKRGRKGLSGI------PGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLE-------LIDQKGDYIVTPEQ-ILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPG---PIGPKGESGVPGLPGNPG---------DSGEPGSPGEPGRKGDRGMVSSVGG--MGADFPTAIIEG----------------------PPGPPGDRGDPGDPGRDGKPGM---PGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGPKGEPGLH-----GSKGERGKRGRKGDKGDMGLVGPPGLDAP 384
PPG GK+G G GL G PG PGS GS G PG G PG GLKG+ G GSPG + +KGD E+ I KGE G G G G QG G G G +G PG IG KGESGV GL G G G PG G+PGR+ + V + A P + G P GP G RG PG PGRDG PG+ PG P G+ G G+ G+KG G G PG +G GP GP+G PG+ G G GK G G G G GPPG+ P
Sbjct: 624 PPGQQGKKGAPGMPGLMGSNGSPGQPGTPGSKGSKGEPGIQGMPGASGLKGEPGATGSPGEPGYMGLPGIQGKKGDKGNQGEKGIQGQKGENGRQGIPGQQGIQGHHGAKGERGEKGEPGVRGAIGSKGESGVDGLMGPAGPKGQPGDPGPQGPPGLDGKPGREFSEQFIRQVCTDVIRAQLPVLLQSGRIRNCDHCLSQHGSPGIPGPPGPIGPEGPRGLPGLPGRDGVPGLVGVPGRPGVRGLKGLPGRNGEKGSQGFGYPGEQGPPGPPGPEGPPGISKEGPPGDPGLPGKDGDHGKPGIQGQPGPPGICDP 938
BLAST of isoform r vs. SwissProt
Match: gi|189082691|sp|A8TX70.1|CO6A5_HUMAN (RecName: Full=Collagen alpha-5(VI) chain; AltName: Full=Collagen alpha-1(XXIX) chain; AltName: Full=von Willebrand factor A domain-containing protein 4; Flags: Precursor) HSP 1 Score: 119.013 bits (297), Expect = 4.383e-26 Identity = 115/302 (38.08%), Postives = 141/302 (46.69%), Query Frame = 0
Query: 105 LGEK-QPWLLTRPKRQILGGECNCP--PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKG-------DYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDS----GEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDG 391
LG+K +L +R C CP PGP G RG + KG G+ G G G +G P G G+ G +G KG G PG QKG + I L GE G G G G +G+PG G G +G PG GE G PG PGNPG + G+ GS GE GR+G G ++G P G RG G G G G PGNP G G +G +G +G G+ G G KG G +GP+G PGL G+KG G+ G G KG+ GL G G PVG G
Sbjct: 1370 LGKKLSQYLGNIAERTCCCTFCKCPGIPGPHGTRGLQAMKGSQGLKGSRGHRGEDGNP---GVRGDTGPQGDKGIAGCPG--AWGQKGLKGFSGPKGGHGDDGIDGLDGEEGCHGFPGIKGEKGDPGSQGSPGSRGAPGQY---GEKGFPGDPGNPGQNNNIKGQKGSKGEQGRQGRSGQKG-------------VQGSPSSRGSRGREGQRGLRGVSGEPGNPGPTGTLGAEGLQGPQGSQGNPGRKGEKGSQGQKGPQGSPGLMGAKGSTGRPGLLGKKGEPGLPGDLG-----PVGQTG 1645 HSP 2 Score: 105.916 bits (263), Expect = 4.456e-22 Identity = 102/265 (38.49%), Postives = 123/265 (46.42%), Query Frame = 0
Query: 145 GIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGE---------PGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGDGIP--GPKGDAGPRGPKGEPGLHGSKGERGKR------------------GRKGDKGDMGLVGPPG 380
G G PG G G PG G PG G GQ GE G PG G+ P Q +KG+ G+ G G G G+ G+ G +G G G +G GV G PGNPG +G GS G PGRKG++G S G G +G PG G +G G PG GK G PG P G GQ G+RG++G GIP G G G +GP+G PG G KG+ G G KG++G GL GPPG
Sbjct: 1476 GCHGFPGIKGEKGDPGSQGSPGSRGAPGQYGEKGFPG-----DPGN----PGQNNNIKGQKGSKGEQGRQGRSGQKGVQGSPSSRGSRGREGQRGLRGVSGEPGNPGPTGTLGAEGLQGPQGSQGNPGRKGEKG---SQGQKGP-------QGSPGLMGAKGSTGRPGLLGKKGEPGLPGDLGPVGQTGQRGRQG--DSGIPGYGQMGRKGVKGPRGFPGDAGQKGDIGNPGIPGGPGPKGFRGLALTVGLKGEEGSRGLPGPPG 1719 HSP 3 Score: 102.834 bits (255), Expect = 3.983e-21 Identity = 95/271 (35.06%), Postives = 125/271 (46.13%), Query Frame = 0
Query: 150 PGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPK---------------GESGVPGLPGNPGDSGEPGSPGE---PGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGP---RGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLD-APCPVGPDGLP-LPG 396
PG G +GT G G GLKG +G G G PG G GP G++G G PG G +G G GPK G G PG+ G GD G GSPG PG+ G++G G G + G G +G+ G GR G+ G+ G+P++ G G++G+RG +G G+ G PGP G G +GP+G G G KGE+G +G+KG +G GL+G G P +G G P LPG
Sbjct: 1394 PGIPGPHGTRGLQAMKGSQGLKGSRGHRGEDG----------------------NPGVRGDTGPQGDKGIAGCPGAWGQKGLKGFSGPKGGHGDDGIDGLDGEEGCHGFPGIKGEKGDPGSQGSPGSRGAPGQYGEKGFPGDPGNPGQN------NNIKGQKGSKGEQGRQGRSGQKGVQGSPSSRGSRGREGQRGLRGVSGEPGNPGPTGTLGAEGLQGPQGSQGNPGRKGEKGSQGQKGPQGSPGLMGAKGSTGRPGLLGKKGEPGLPG 1636 HSP 4 Score: 96.6709 bits (239), Expect = 4.079e-19 Identity = 94/242 (38.84%), Postives = 120/242 (49.59%), Query Frame = 0
Query: 123 GECNCPPGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGP------IGPKGESGVPGL------PGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGPKGEP 352
G+ N G G +G++GR+G SG G GS S G+ G+ G+ GL+G GE G+PG P G GA G GP G+QG PG G G QG+ GP +G KG +G PGL PG PGD G G G+ GR+GD G + G MG ++GP G PGD G GD G G PG PG G+ G +G++G G+PGP G G +G G+P
Sbjct: 1518 GQNNNIKGQKGSKGEQGRQGRSGQKGVQGSPSSRGSRGR---EGQRGLRGVSGEPGNPG-------------P------TGTLGAEGLQGPQGSQGNPGRKGEKGSQGQKGPQGSPGLMGAKGSTGRPGLLGKKGEPGLPGDLGPVGQTGQRGRQGDSG-IPGYGQMG----RKGVKGPRGFPGDAGQKGDIGNPGIPGGPGPKGFRGLALTVGLKGEEG--SRGLPGPPGQRGIKGMAGQP 1730
BLAST of isoform r vs. SwissProt
Match: gi|81999689|sp|Q5UNS9.1|COLL7_MIMIV (RecName: Full=Collagen-like protein 7) HSP 1 Score: 118.242 bits (295), Expect = 7.408e-26 Identity = 98/253 (38.74%), Postives = 129/253 (50.99%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPG 380
G +G++G G KG G G G G+ G G G G+ G KG KG+IG+ G KGD +KG+ G G G +G +G+ G G G +G G G KG G GL G+ G G+ G G G +GD+G + + G G D T G G GD+GD G+ G G G+ G+ G G +G KG GD G+ G KGD G +G KG+ G++GSKG +G +G KG KGD G G G
Sbjct: 686 KGTSGEKGDLGSKGEKGDTGEKGDKGNKGDRGDKGIKGDIGSKGDKGDIGNKG-----DKGD-----RGDKGIKGDAGLKGDKGDIGQKGDKGTKGDRGDKGEKGDAGLKGNKGDIGLKGDKGTKGDRGDKGTKGDRGDKGDIGNKGDKG-DKGTKGDRGDKGVKGDKGDKGNKGDKGNIGIKGDKGDRSDKGLKGDKGDKGDTGDIGLKGDKGDIGEKGIKGDKGINGSKGYKGDKGDKGSKGDKGNKGDKG 927 HSP 2 Score: 112.079 bits (279), Expect = 5.826e-24 Identity = 108/304 (35.53%), Postives = 140/304 (46.05%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGS------PGEPGRKGDRGM--VSSVGGMGADFPTAIIEGP---------------------PGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-------------GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPD 390
G G RG +G KG +G PG G G+ G G++G G G KG KG+IG G + KGD E+ KG+ G G G LG +GE G PG G +G G G KG+ G G G+ GD G+ G GE G KGD+G+ S + G G P ++G G++GD G+ G DG+ G G+ GI G G +G G GD G G KGD G +G KGE G+ G KG+ G++G KGD GD G G G+D + D
Sbjct: 107 KGEKGDRGLKGEKGNNGDPGEKGEKGAKGDKGESGEKGAKGDKGDKGDIGEKGEK--GDKGDIGEKGEK--GDKGDIGEKGDKGDLGEKGEKGDPGQKGEKGDKGDFGDKGDKGDIGEKGDKGDIGDKGEIGNKGDVGEKGSKGDKGIDGTSILFGFGIPSPDLGVDGDLYLDANTDELYGKVNGQWIPITNLKGEKGDKGNKGIDGEKGNKGDTGDKGIDGSKGDKGDTGNKGDIGDKGDQGIKGDIGDKGEKGDIGEKGDKGEKGIKGDKGDIGEKGNKGDIGDKGEKGDKGIDGDKGIKGD 406 HSP 3 Score: 111.694 bits (278), Expect = 7.949e-24 Identity = 94/256 (36.72%), Postives = 125/256 (48.83%), Query Frame = 0
Query: 133 GKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD----GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAP 384
G +G++G KG +G G G G G+ G+ G GE G KG KG+ G G+ KG+ G+ G G +GN+G+ G G G++G G G KG+ G G G GD G+ G G+ G KG++G + G+ D T G G GDRGD GD G G G G G G G +G KG GD GI G KGD +G KG+ G G G+ G +G KGD G+ G+ G G++
Sbjct: 672 GDKGEKGDKGNAGDKGTSGEKGDLGSKGEKGDTGEKGDKGNKGDRGDKGI-------------------KGDIGSKGDKGDIGNKGDKGDRGDKGIKGDAGLKGDKGDIGQKGDKGTKGDRGDKGEKGDAGLKGNKGDI----GLKGDKGTKGDRGDKGTKGDRGDKGDIGNKGDKGDKGTKGDRGDKGVKGDKGDKGNKGDKGNIGIKGDKGDRSDKGLKGDKGDKGDTGDIGLKGDKGDIGEKGIKGDKGINGS 904 HSP 4 Score: 107.457 bits (267), Expect = 1.378e-22 Identity = 101/281 (35.94%), Postives = 135/281 (48.04%), Query Frame = 0
Query: 135 RGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGL---------ELIDQKGD-YIVTPEQILM------------LKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPK---------GESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD----GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPG 380
+G +G KG++G G G G G PG N GE G KG KG+ G+ L + +D GD YI T L +KG+ G G G G++G G G G +G G G K G+ G+ G G+ GD G+ G+ G+ G +GD+G+ G+ D +G G GDRGD G+ G G G G+ G G G RG KG GD G G KGD G +G KG+ G G KG++G +G KGDKG++G+ G G
Sbjct: 584 KGDKGDKGINGNKGDKGEKGDKGNPGTNAGKGEKGDKGDKGDAGTSILFGQGAPDPNQGVD--GDIYIDTLTGELYRKVNGLWVPEIDIKGDKGEKGDKGNAGDKGTSGEKGDLGSKGEKGDTGEKGDKGNKGDRGDKGIKGDIGSKGDKGDIGNKGDKGDRGDKGIKGDA-GLKGDKGDIGQKGDKGTKGDRGDKGEKGDAGLKGNKGDIGLKGDKGTKGDRGDKGTKGDRGDKGDIGNKGDKGDKGTKGDRGDKGVKGDKGDKGNKGDKGNIGIKGDKG 861 HSP 5 Score: 104.375 bits (259), Expect = 1.236e-21 Identity = 104/299 (34.78%), Postives = 137/299 (45.82%), Query Frame = 0
Query: 130 GPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQ--------KGDYIVTPEQILM-------------------------------------LKGEPGAPGPLG---PLGNQGEPGLPGYDGVQGRPGPIGPKGE---SGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLV 376
G G +G G KG G PG+ G G G G G G+ G KG KG+IG G E+ ++ KGD + IL LKGE G G G GN+G+ G G DG +G G G KG+ G G+ G+ GD GE G GE G KG++G+ G +G +G G GD+G+ GD G DG G+ G+ G G G G+KG G+ G G KGD G +G KG+ G G KG++G++G KGDKG+ G +
Sbjct: 180 GEKGDKGDLGEKGEKGDPGQKGEKGDKGDFGDKGDKGDIGEKGDKGDIGDKG-EIGNKGDVGEKGSKGDKGIDGTSILFGFGIPSPDLGVDGDLYLDANTDELYGKVNGQWIPITNLKGEKGDKGNKGIDGEKGNKGDTGDKGIDGSKGDKGDTGNKGDIGDKGDQGIKGDIGDKGEKGDIGEKGDKGEKGIKGDKGDIGE-------KGNKGDIGDKGEKGDKGIDGDKGIKGDKGDIGEKGDKGDIGEKGNKGEKGDKGDKGDIGEKGDKGDTGSKGDKGDKGEKGDKGDKGEKGDI 470 HSP 6 Score: 89.7373 bits (221), Expect = 4.208e-17 Identity = 79/194 (40.72%), Postives = 95/194 (48.97%), Query Frame = 0
Query: 202 KGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPP---GLDAPCP-VGPDG 391
KGE G GP G G +G+ GL G G G PG E G G G+ G+SGE G+ G+ G KGD G G +G G G++GD GD G G G G G PGQ G++G KG GD G KGD G +G KG+ G G G +G G KG KGD G+ G G P P +G DG
Sbjct: 95 KGEKGETGPKGIKGEKGDRGLKGEKGNNGDPG------EKGEKGAKGDKGESGEKGAKGDKGDKGDIGEKGEKG----------DKGDIGEKGEKGDKGDIGEKGDKGDLGEKGEKGDPGQKGEKGDKGDFGD--KGDKGDIGEKGDKGDIGDKGEIGNKGDVGEKGSKGDKGIDGTSILFGFGIPSPDLGVDG 270 HSP 7 Score: 85.8853 bits (211), Expect = 7.066e-16 Identity = 94/279 (33.69%), Postives = 119/279 (42.65%), Query Frame = 0
Query: 145 GIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGK------------------------------------------RGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPG 380
G P G G G G G G+ GLKG+KG G PG +KG+ + KGE G G G G++G+ G G G +G G G KG+ G G G+ GD GE G G+PG+KG++G DF +G G GD+GD GD G G G G + G G DG +G+KG G+ GI G KG+ G G KG G G KG+ G +G GDKGD G+ G G
Sbjct: 90 GNPHTKGEKGETGPKGIKGEKGDRGLKGEKGNNGDPG-----EKGEKGAKGD-----KGESGEKGAKGDKGDKGDIGEKGEKGDKGDIGEKGEKGDKGDIGEKGDKGDLGEKGEKGDPGQKGEKGDK-------GDFGDKGDKGDIGEKGDKGDIGDKGEIGNKGDVGEKGSKGDKGIDGTSILFGFGIPSPDLGVDGDLYLDANTDELYGKVNGQWIPITNLKGEKGDKGNKGIDGEKGNKGDTGDKGIDGSKGDKGDTGNKGDIGDKGDQGIKGDIG 351 HSP 8 Score: 81.2629 bits (199), Expect = 1.991e-14 Identity = 99/321 (30.84%), Postives = 125/321 (38.94%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVG-----GMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-------------------------------------GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRK---------------------------------GDKGDMG 374
G G +G +G +G GI G G G G G+ G G G +G KGE G GL+ KGD + LKG+ G G G G +G+ G G G +G G G KG+ G G+ G+ GD G G G G KGD+G S G G D ++G G G++G GD G +G G G+ G G G +G KG GD G G KGD G +G KG G GSKG++G +G K GDKGD G
Sbjct: 731 KGDIGNKGDKGDRGDKGIKGDAGLKGDKGDIGQKGDKGTKGDRGDKGEKGDAGLK--GNKGD--------IGLKGDKGTKGDRGDKGTKGDRGDKGDIGNKGDKGDKGTKGDRGDKGVKGDKGDKGNKGDKGNIGIKGDKGDRSDKGLKGDKGDKGDTGDIGLKGDKGDIGEKGIKGDKGINGSKGYKGDKGDKGSKGDKGNKGDKGSKGDKGDIGIKGSKGDKGDKGDKGSKGDKGDIGSKGDKGDKGDIGTKGDKGTKGDKGIKGDIGSKGDKGSKGDKGSKGDKGDIGSKGDKGDKGDKGSKGDKGSKGIKGDKGDKG 1041 HSP 9 Score: 70.8626 bits (172), Expect = 3.338e-11 Identity = 89/259 (34.36%), Postives = 114/259 (44.02%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLE-LIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPP--GPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGPKGEPGLHGS------------------KGERGKRGR 366
G G RG +G KG G G G+ G G G G G+ G+KG KG+ G+ G + I KGD ++ LKG+ G G G +G +G+ G G G++G G G KG G G G+ GD G G G G KGD G+ S G G G GD+GD GD G G G G+ GI G G +G KG KGD G +G KG+ G G KG++G +G
Sbjct: 797 KGTKGDRGDKGTKGDRGDKGDIGNKGDKGDKGTKGDRGDKGVKGDKGDKGNKGDKGNIGIKGDKGDRSDK--GLKGDKGDKGDTGDIGLKGDKGDIGEKGIKGDKGINGSKGYKGDKGDKGSKGDKGNKGDKGSKGDKGDIGIKGSKGDKGDKGDKGSKGDKGDIGSKGDKGDKGDIGTKGDKGTKGDK---GIKGDIGSKGDKG--------SKGDKGSKGDKGDIGSKGDKGDKGDKGSKGDKGSKGIKGDKGDKGT 1042 HSP 10 Score: 68.5514 bits (166), Expect = 1.640e-10 Identity = 62/172 (36.05%), Postives = 77/172 (44.77%), Query Frame = 0
Query: 238 KGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGD------------------------PGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD----GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGL 381
KG+ G G+ GN GD GE G G PG +G G G D T+I+ G P ++G GD G G+ G GN G G+ G G KG GD G G KGD G +G KG+ G G KG+ G +G KGD+GD G+ G GL
Sbjct: 584 KGDKGDKGINGNKGDKGEKGDKGNPGTNAGKGEKGDKGDKG-DAGTSILFGQGAPDPNQGVDGDIYIDTLTGELYRKVNGLWVPEIDIKGDKGEKGDKGNAGDKGTSGEKGDLGSKGEKGDTGEKGDKGNKGDRGDKGIKGDIGSKGDKGDIGNKGDKGDRGDKGIKGDAGL 754
BLAST of isoform r vs. SwissProt
Match: gi|81912968|sp|Q80ZF0.1|CORA1_RAT (RecName: Full=Collagen alpha-1(XXVII) chain; Flags: Precursor) HSP 1 Score: 114.775 bits (286), Expect = 7.356e-25 Identity = 115/267 (43.07%), Postives = 136/267 (50.94%), Query Frame = 0
Query: 130 GPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDGLPLP 395
GP G RG RG G G PG+ G G G PG+ G PG G +G+ G GS G E KG+PG G G G QG GLPG GV GR GP G G+ G PG G PG GE G+ G+PG G G + G A + G GPPG +G+ G PG+ G PG G G+PG G+ G KG+ GD G G G AG GPKG PG G KG +G RG G G G++GPPG+ +GP GLP P
Sbjct: 1343 GPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEE----------------GPKGKPGKAGASGRRGTQGLQGLPGPRGVVGRQGPEGMAGQDGNPGRDGRPGYQGEQGNDGDPGPVGPAGRRGNPG-------VAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPGM-----LGPSGLPGP 1581 HSP 2 Score: 102.449 bits (254), Expect = 4.749e-21 Identity = 117/310 (37.74%), Postives = 140/310 (45.16%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAII--EGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGK---KGRDGDGIP----------------GPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDK---------------GDMGLVGPPGLDA----------PCPVGPDGL 392
PGP G++G +G G +G PG G G G+PG G+PG G G G+ G G YI G PG G G G +G PG+PG G GRPG G GE G PGL GNPG+ G PG PG G GD G + VG G ++ G PG GD+G+ G PG G PG G+ + G+PG G RGK G+ GD GP GD GP G KG+PG G G G+ G +GD+ G G G PGLD P PVG GL
Sbjct: 696 PGPMGRKGHKGHPGAAGHPGEQGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSR------GYI----------GLPGLFGLPGSDGERGLPGIPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPGPPGVLGLLGDMGALGPVGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGLPGFPGARGKPGPMGKAGDKGSLGLPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGL 989 HSP 3 Score: 95.9005 bits (237), Expect = 6.164e-19 Identity = 107/264 (40.53%), Postives = 125/264 (47.35%), Query Frame = 0
Query: 135 RGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGPKGEPGLHGSKGER------GKRGRKGDKGDMGLVGPPGLDA-PCPVGPDG 391
+G++G GLS G+ G+ G PG G PG G KG KG G+ G GE G PGP G G +G PG G+ G G PGP G +G G+PGL G PG GE G PG PG++G+ G PG PGD G+ G PG DG PG G P G+ G G G G G PGPKG G G GEPGL G KGE+ G G +GDKG GL G PG P P+G G
Sbjct: 666 KGQKGDPGLSPGQAHDGAKGNMGLPGLAGNPGPMGRKGHKGHPGAAGHP-------------------GEQGQPGPEGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGIPGKRGEMGR-------------------PGFPGDFGERGPPGLDGNPGEIGLPGPPGVLGLLGDMGALGP--VGYPGPKGMKGLMGGVGEPGLKGDKGEQGVPGVSGDPGFQGDKGSHGLPGFPGARGKPGPMGKAG 889 HSP 4 Score: 90.5077 bits (223), Expect = 2.514e-17 Identity = 110/277 (39.71%), Postives = 139/277 (50.18%), Query Frame = 0
Query: 136 GKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLK----GEPGAP---------GPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGM--GADFPTAIIEGPPGPPG------------DRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGP---KGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGL 381
G+ GRKG G PG GS G G PG+ G GE GL G G +G PG+ + +KGD V G PG P GP GP G++G PG+ G G +G GP GP GE G GL G G G PG PG+ G G+RG + G + +G PG PG + G G PG G+PG+PG+ G G G G++G G G PG +GD GP GP KG+ G G GE G++G++G KG+ GL GPPG+
Sbjct: 955 GQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFVGLVGEPGI--VGEKGDRGVMGPPGAPGPKGSMGHPGTPGGVGDPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRGRPGQPGQQGAAGERGHSGAKGFLGIPGPSGPPGAKGLPGEPGSQGPQGPVGPPGEMGPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGEPGLEGDLGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEEGLPGPPGI 1229 HSP 5 Score: 90.5077 bits (223), Expect = 2.535e-17 Identity = 109/297 (36.70%), Postives = 131/297 (44.11%), Query Frame = 0
Query: 136 GKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGN---------------------------------------------PGDSGEPGSPGEPGRKGDRGMVSSV---------GGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDG-DGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVG 377
G +G G G PG PG SG G G G PGE GL GQ+GE PGLE GD + P LKG+ G PGP G G +G+ GL G +G+ G PG G +G G PG G PG G G PG G G +G+ + G G D T GPPG G GD GD G G PG PG G+ G+ G++G+ G G G PGPKG G GPKG+PG G+ G RG +G +G G G+VG
Sbjct: 1141 GPKGPPGAVGEPGLPGDSGMKGDLGPLGPPGEQGLIGQRGE---PGLE-----GD--LGPVGPDGLKGDRGDPGPDGEHGEKGQEGLKGEEGLPGPPGITGVRGREGKPGSQGEKGQRGAKGAKGYQGQLGEMGIPGDPGPPGTPGPKGSRGTLGPMGAPGRMGAQGEPGLAGYNGHKGITGPLGPPGPKGEKGEQGEDGKTEGAPGPPGERGPVGDRGDRGEPGDPGYPGQEGVQGLRGEPGQQGQPGHPGPRGRPGPKGSKGEEGPKGKPGKAGASGRRGTQGLQGLPGPRGVVG 1427 HSP 6 Score: 89.3521 bits (220), Expect = 6.666e-17 Identity = 91/237 (38.40%), Postives = 116/237 (48.95%), Query Frame = 0
Query: 129 PGPAGK---RGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKG------EIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGL---------PGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRG 347
PGP G+ +G +G +G G PG+ G+SG GT G G PG G+ G++G + G+PG D + Y +G G PGP+GP G +G PG+ PG+ G G PG +GP G+ G G G PG+ GEPGS G+PG G+ G G + GP GPPGD G G G G PG+ G G PG G G+PGPKGD G RG
Sbjct: 1381 PGPRGRPGPKGSKGEEGPKGKPGKAGASGRRGTQGLQGLPGPRGVVGRQGPEGMAGQDGNPGR---DGRPGYQGE-------QGNDGDPGPVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPGNQGEPGSKGQPGDSGEMGFPGVAG----------LFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPGMLGP--------SGLPGPKGDRGSRG 1589 HSP 7 Score: 77.7962 bits (190), Expect = 2.445e-13 Identity = 114/318 (35.85%), Postives = 136/318 (42.77%), Query Frame = 0
Query: 130 GPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPG---LPGYDGVQGRPGP------------------------IGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAG----------------PRGP-----------------KGEPGLHGSKGERGKR------GRKGDKGDMGLVGPPG 380
GP G G G GL G PG G G G G G+PG G+KG G +G PGL KGD KGE G PG G G QG+ G LPG+ G +G+PGP IGP G++G G+ G PG G PG PG+ G +GD G + G G + G PG +G PG PG DG G PG+P G G+ G G G G+ GI G KGD G P P +G PG+ G+KG RG R G +G KG G VGP G
Sbjct: 793 GPPGLDGNPGEIGLPGPPGVLGLLGDMGALGPVGYPGPKGMKGLMGGVGEPGL-----KGD-----------KGEQGVPGVSGDPGFQGDKGSHGLPGFPGARGKPGPMGKAGDKGSLGLPGPPGPEGFPGDIGPPGDNGPEGMKGKPGARGLPGPPGQLGPEGDEGPMGPPGVPGLE----------GQPGRKGFPGRPGLDGSKGEPGDPGRPGPVGEQGLMGFVGLVGEPGIVGEKGDRGVMGPPGAPGPKGSMGHPGTPGGVGDPGEPGPWGPPGSRGLPGMRGAKGHRGPRGPDGPAGEQGSKGLKGRVGPRG 1084 HSP 8 Score: 62.7734 bits (151), Expect = 8.018e-9 Identity = 64/149 (42.95%), Postives = 77/149 (51.68%), Query Frame = 0
Query: 128 PPGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGE------GGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGM 270
P GPAG+RG G GL G G PG G +G PG+ G PG+ GL G +GE GS G Q GD GE G PG G G +G PG G+ G+QG GP G G+ G+ G PG G SG PG G+ G +GD G+
Sbjct: 1461 PVGPAGRRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGTGLPGNQGEPGSKG-----QPGD-----------SGEMGFPGVAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIIGPPGMLGPSGLPGPKGDRGSRGDWGL 1593
BLAST of isoform r vs. SwissProt
Match: gi|82000041|sp|Q5UQ13.1|COLL2_MIMIV (RecName: Full=Collagen-like protein 2) HSP 1 Score: 114.005 bits (284), Expect = 1.331e-24 Identity = 103/258 (39.92%), Postives = 133/258 (51.55%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKG------DKGDMGLVGPPG 380
G G +G +G KG GI G G G NGT G NG G+ G KG KG+IG G+ KGD + +KG+ G G G GN+G+ G G G++G G IG KG+ G G+ G+ GD G+ G G+ KGD+G D T +G G GD+GD G G +G G G+ +GI G G +G KG GD G KGD G +G KG+ G+ G KG+ G +G KG DKGD G+ G G
Sbjct: 247 KGNKGDKGIKGDKGSEGIKGDNGIKGDNGTKGDNGTKGDNGTKGDKGDIGDNGI-----KGDKGDIGDN--GIKGDKGNKGDNGDKGNKGDKGDIGDKGMKGDKGDIGDKGDIGDKGMKGDKGDIGDKGMKGDNSTKGDKG----------DNGTKGDKGDNGIKGDKGDNGTKGDNGDNGTKGDKGDNGIKGDKGDKGTKGDKGD--KGTKGDNGDKGTKGDNGIKGYKGDIGDKGIKGESGANADKGDKGIKGDKG 485 HSP 2 Score: 100.523 bits (249), Expect = 2.219e-20 Identity = 103/266 (38.72%), Postives = 137/266 (51.50%), Query Frame = 0
Query: 128 PPGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEI--GSPGLEL-IDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRD------GKPGMPGNPATDGIPGQDGKRGKKGRDG----DGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPG 380
G G +G +G KG G G GS+G G G G GE G KG KG+ GS G + + KGD ++ +KG+ G+ G G G +G+ G G +G +G G G KG+ G G+ G+ GD G+ G G+ G KGD G + G G D ++G G GD+GD GD G G GM G+ +T G G +G +G KG +G G G KGD G G KG+ G +G KG++G +G KGDKGD G G G
Sbjct: 181 SQGDQGYKGDQGSKGDKGQKGEFGSAGFKGDKGDMGQKGETGAKGDKGDKGEGSKGSKGDVGNKGDKGNKGDK--GIKGDKGSEGIKGDNGIKGDNGTKGDNGTKGDNGTKGDKGDIGDNGIKGDKGDIGDNGIKGDKGNKGDNGDKGNKGDKG-DIGDKGMKGDKGDIGDKGDIGDKGMKGDKGDIGDKGMKGDNSTKGDKGDNGTKGDKGDNGIKGDKGDNGTKGDNGDNGTKGDKGDNGIKGDKGDKGTKGDKGDKGTKGDNG 443 HSP 3 Score: 99.3673 bits (246), Expect = 4.226e-20 Identity = 99/258 (38.37%), Postives = 132/258 (51.16%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMG--ADFPTAIIEGPPGPPGDRGDPGD---PGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGL 381
G G++G+ G KG G G GS GS G G G G G KG KG+ GS G+ KGD + + G G G G G +G+ G G +G++G G IG ++G+ G GN GD+G+ G+ G+ G GD+GM G +G D ++G G GD+G GD G G G G+ +GI G G G KG +GD G KGD G G KG+ G G+KG++G +G KGD GD G G G+
Sbjct: 212 KGDMGQKGETGAKGDKGDKG-EGSKGSKGDVGNKGDKGNKGDKGIKGDKGSEGI-----KGDNGIKGDN-----GTKGDNGTKGDNGTKGDKGDIGDNGIKGDKGDIG---DNGIKGDKGNKGDNGDKGNKGDKGDIGDKGMKGDKGDIGDKGDIGDKGMKGDKGDIGDKGMKGDNSTKGDKGDNGTKGDKGDNGIKGDKGDNGTKGDNGD--NGTKGDKGDNGIKGDKGDKGTKGDKGDKGTKGDNGDKGTKGDNGI 453 HSP 4 Score: 98.2117 bits (243), Expect = 1.106e-19 Identity = 108/332 (32.53%), Postives = 143/332 (43.07%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGE------PGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-------GIPGPKGDAGPRGPKGEPGLHGSKGERGKRG------------------------------------RKGDKGDMGLVGPPGLDAPCPVGPD---GLPLPGCGWRKSTEAFPG 408
G G G +G KG G G GS G+ G G+ GF GE G KG+KG G+ G KGD KG+ G G +G G++G+ G+ G +G++G G G KG+ G G G+ G+ GE G+ G+ G KGD+G+ S G G I+G G GD+G+ G+ G G G GN G G G +G KG GD G G KGD G G KG+ G+ G+ G++G +G KGDKGD G G GL G GL + G K + + G
Sbjct: 823 KGIKGNTGSKGDKGSKGDKGEKGSKGNKGEKGEKGFKGEKGSKGEKGSKGNKG-----DKGD--------KGFKGDNGIKGNIGVKGDKGDSGIKGENGLKGDVGDKGIKGDKGNEGDKGDKGNKGEKGNRGDEGDKGIKGNKGDKGIKGSEGDKG-------IKGESGSKGDKGEKGNKGYKGDKGDKGNLGIKGDKGDKGIKGVKGTKGDKGTKGVKGTKGDKGDKGTNGDKGDKGIKGTNGDKGNKGLEGDKGNIGGKGDKGDKGDKGDKGDKGDKGVNGDKGSKGDKGDQGTKGETGLSIKGDKGDKGEFGLSIKGDKGVKGDQGYKG 1134 HSP 5 Score: 96.6709 bits (239), Expect = 3.019e-19 Identity = 99/278 (35.61%), Postives = 138/278 (49.64%), Query Frame = 0
Query: 130 GPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQ--KGDYIVTPEQILM----LKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVG-----GMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDGLPLP 395
G G +G G G+ G G G +G G G G G+ G+KG KG+IG G ++ D+ KGD ++ + KG+ G G G G+ G G G +G +G G G KG+ G G+ G+ GD G G G+ G KGD G + G G D I+G G D+GD G G G G+ G+ + G G +G+ G+KG +G+ G G KGD G +G KGE G G KG+ G++G G+KG+ G G G + G+P P
Sbjct: 299 GIKGDKGDIGDNGIKGDKGNKGDNGDKGNKGDKGDIGDKGMKGDKGDIGDKG-DIGDKGMKGDKGDIGDKGMKGDNSTKGDKGDNGTKGDKGDNGIKGDKGDNGTKGDNGDNGTKGDKGDNGIKGDKGDKGTKGDKGDKGTKGDNGDKGTKGDNGIKGYKGDIGDKGIKGESGANADKGDKGIKGDKGDKGIKGDDGSKGDKGYNGEIGQKGDNGEKGDNGEKGDNGEKGDKGEKGDIGEKGDNGEKGDIGEKGNKGSKGDKGEIGSSILFGQGIPSP 575 HSP 6 Score: 87.8113 bits (216), Expect = 1.545e-16 Identity = 97/287 (33.80%), Postives = 126/287 (43.90%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILM----LKGEPGAPGPLGPLGNQGEPGLPG---------------------------YDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD----GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPG 380
G G +G +G KG G G GS G G G F G+ G KG KG G G KGD ++ KG+ G G G G++G+ G G Y G +G G G KG+ G G+ GN G G+ GS G+ G KG +G G G +G G G++GD GD G G G+ GN G G G +G+ G GD GI G KG+ G +G KG G G++G+ G +G KG+KGD G+ G G
Sbjct: 682 KGDEGIKGDKGNKGDKGDKGDIGSQGIKGESGSAVFKGDKGTKGDKGNKGDKG-----NKGDKGTNGDKGNKGDKGSKGDKGTKGDKGIKGDKGDKGSKGNKGSKGDKGDKGDSGDKGDKGDKGSKGYKGDKGDKGSKGYKGDKGDKGIKGNTGSKGDKGSKGDKGEKGSKGNKGEKGEKGFKGEKG-SKGEKGSKGNKGDKGDKGFKGDNGIKGNIGVKGDKGDSGIKGENGLKGDVGDKGIKGDKGNEGDKGDKGNKGEKGNRGDEGDKGIKGNKGDKGIKGSEG 962 HSP 7 Score: 86.2705 bits (212), Expect = 4.990e-16 Identity = 95/260 (36.54%), Postives = 118/260 (45.38%), Query Frame = 0
Query: 135 RGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELI----------DQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD----GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPG 380
RG++G KG GI G G G G+ G+KG KG G G ++ + GD + +M K G P +G +G G GY G QG G G KGE G G G+ GD G+ G G G KGD+G S G D +G G G +GD G G G G+ G+ T G G G G KG GD GI G KGD G G KG+ G G G++G +G KGD GD G+ G G
Sbjct: 98 RGEKGEKGQLGIMGYKGEKGEIGSQ---------GIKGMKGSDGLNGSTILFGQGLPRPYEGENGDVYIDKNTGIMYKKINGIWIP--QVGLKGSQGDQGYKGDQGSKGDKGQKGEFGSAGFKGDKGDMGQKGETGAKGDKGDKGEGSK--GSKGDVGNKGDKGNKGDKGIKGDKGSEGIKGDNGIKGDNGTKGDNGTKGDNGTKGDKGDIGDNGIKGDKGDIGDNGIKGDKGNKGDNGDKGNKGDKGDIGDKGMKGDKG 344 HSP 8 Score: 85.1149 bits (209), Expect = 1.311e-15 Identity = 95/251 (37.85%), Postives = 115/251 (45.82%), Query Frame = 0
Query: 138 RGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPV 387
+G KG G G G G G G G G G KG KG+IGS G I + KG+ G G G G++G G G +G +G G G KG+ G G G GD G+ GS G G KGD+G D +G G GD+GD G G G+ GI G G +G KG GD G G KG+ G +G KG G GSKGE+G +G KGDKGD G G G+ V
Sbjct: 664 KGDKGSKGDKGSKGDKGDKGDEGIKGDKGNKGDKGDKGDIGSQG----------IKGESGSAVFKGDKGTKGDKGNKGDKGNKGDKGTNGDKGNKGDKGSKGDKGTKGDKGIKGDKGDKGSKGNKGSKGDKGDKGDS----GDKGDKGDKGSKGYKGDKGDK------GSKGYKGDKGDKGIKGNTGSKGDKGSKGDKGEKGSKGNKGEKGEKGFKGEKGSKGEKGSKGNKGDKGDKGFKGDNGIKGNIGV 894 HSP 9 Score: 79.7221 bits (195), Expect = 5.583e-14 Identity = 87/259 (33.59%), Postives = 116/259 (44.79%), Query Frame = 0
Query: 129 PGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAI--------------IEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDG-----IPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRK 367
G G++G RG +G GI G G G G+ G G GE G KG KGE G+ G KG+ G G LG G++G+ G+ G G +G G G KG G G G GD G+ G G G KG++G+ G +G + G G GD+GD G G G + G+ G I G G +G +G GD G G KGD G +G KG+ G+ G+KG++G +G
Sbjct: 931 KGNKGEKGNRGDEGDKGIKGNKGDKGIKGSEGDKGIKGESGSKGDKGEKGNKGY-------------------KGDKGDKGNLGIKGDKGDKGIKGVKGTKGDKGTKGVKGTKGDKGDKGTNGDKGDKGIKGTNGDKGNKGLEGDKGNIGGKGDKGDKGDKGDKGDKGDKGVNGDKGSKGDKGDQGTKGETGLS-IKGDKGDKGEFGLSIKGDKGVKGDQGYKGDKGDKGIKGDKGDKGIKGDQGIKGNKGDKGDKGNL 1169 HSP 10 Score: 78.5666 bits (192), Expect = 1.334e-13 Identity = 106/323 (32.82%), Postives = 134/323 (41.49%), Query Frame = 0
Query: 126 NCPPGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGS--------PGLELIDQKGDYIVTPEQILM------------LKGEPGAPGPLGP---------------LGNQGEPGLPG------------YDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGP---------------------KGEPGLHGSKGERGKRGRKGDKGDMGLVGPPG 380
N G G++G G KG G G G G NG G G G G KG KGEIGS P +L + YI IL +KGE G G G +GN+G+ G G G++G G G KG+ G G G+ GD G G G G KGD+G + S G+ + +A+ +G G GD+G+ GD G G G G+ G G G +G KG GI G KGD G +G KG G G KG++G +G KGDKGD G+ G G
Sbjct: 511 NGEKGDNGEKGDNGEKGDKGEKGDIGEKGDNGEKGDIGEKGNKGSKGDKGEIGSSILFGQGIPSPDLGNDGDIYIDDNTGILYKKLNGIWVPQTDIKGEKGDKGESGQSANKGDKGDKGNGGEIGNKGDKGSKGDIGDKGNKGDKGDGGIKGNKGDKGSKGDKGSKGDKGDKGDEGIKGDKGNKGDKGDKGDIGSQ-GIKGESGSAVFKGDKGTKGDKGNKGDKGNKGDKGTNGDKGNKGDKGSKGDKGTKGD--KGIKGDKGDKGSKGNKGSKGDKGDKGDSGDKGDKGDKGSKGYKGDKGDKGSKGYKGDKGDKGIKGNTG 830 HSP 11 Score: 75.0998 bits (183), Expect = 1.584e-12 Identity = 102/317 (32.18%), Postives = 134/317 (42.27%), Query Frame = 0
Query: 138 RGRKGLSGIPGRPGSSGSN------------------------------------------------GTPGKNGFPGEGGL---KGQKGEIGSPGLEL----IDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRK---GDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD----------------GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPG 380
+G KG G G G GS+ G+ G G+ G+ G KGQKGE GS G + + QKG+ ++ KGE G+ G G +GN+G+ G G G++G G G KG++G+ G G GD+G G G G K GD G+ G +G D +G G GD+G+ GD G G GM G+ G G G +G KG GD G G KGD G G KG+ G +G+KG+ G G KGDKGD G+ G G
Sbjct: 113 KGEKGEIGSQGIKGMKGSDGLNGSTILFGQGLPRPYEGENGDVYIDKNTGIMYKKINGIWIPQVGLKGSQGDQGYKGDQGSKGDKGQKGEFGSAGFKGDKGDMGQKGETGAKGDK--GDKGE-GSKGSKGDVGNKGDKGNKGDKGIKGDKGSEGIKGDNGIKGDNGTKGDNGTKGDNGTKGDKGDIGDNGIKGDKGDIG-DNGIKGDKGNKGDNGDKGNKGDKGDIGDKGMKGDKGDIGDKGDIGDKGMKGDKGDIGDKGMKGDNSTKGDKGDNGTKGDKGDNGIKGDKGDNGTKGDNGDNGTKGDKGDNGIKGDKG 425 HSP 12 Score: 71.633 bits (174), Expect = 1.531e-11 Identity = 84/240 (35.00%), Postives = 106/240 (44.17%), Query Frame = 0
Query: 126 NCPPGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGV---PGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGPKGEPGLHGSKGERG 362
N G G G +G KG +GI G G +G+ G G NG G+ G G KG+ G G KGD KG+ G G G G +G+ G+ GY +G G G KGESG G G GD G+ G G+ G KGD+G + G GD G+ GD G G +G++G KG GD G KGD G +G GE G GSKG++G
Sbjct: 373 NSTKGDKGDNGTKGDKGDNGIKGDKGDNGTKGDNGDNGTKGDKGDNGIKGDKGDKGT-----KGD-----------KGDKGTKGDNGDKGTKGDNGIKGY---KGDIGDKGIKGESGANADKGDKGIKGDKGDKGIKGDDGSKGDKGYNGEI----------------GQKGDNGEKGDNGE---------------KGDNGEKGDKGEKGD--IGEKGDNGEKGDIGEKGNKGSKGDKG 560 HSP 13 Score: 60.4622 bits (145), Expect = 4.667e-8 Identity = 95/287 (33.10%), Postives = 132/287 (45.99%), Query Frame = 0
Query: 126 NCPPGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGA-----DFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGN-------PATDGIPGQDGKRGKKGRDGDGIP----------GPKGDAGPRGP---------KGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGL 381
N G G G +G KG G G G G+ G G G G+ G+KG KG+IG G+ KG+ ++ KG G G G G+ G G GY+G G+ G G KG++G G G GD GE G GE G G++G + G G+ + ++I+ G P D G+ GD D G+ P TD I G+ G +G+ G+ + G KGD G +G KG+ G+ G+KG++G +G KG KGD G G G+
Sbjct: 409 NGTKGDKGDNGIKGDKGDKGTKGDKGDKGTKGDNGDKGTKGDNGIKGYKGDIGDKGI-----KGESGANADK--GDKGIKGDKGDKGIKGDDGSKGDKGYNGEIGQKGDNGEKGDNGEKGDNGEKGDKGEKGDIGEKGDNGEKGDIGEKGNKGSKGDKGEIGSSILFGQGIPSPDLGNDGDIYIDDNTGILYKKLNGIWVPQTD-IKGEKGDKGESGQSANKGDKGDKGNGGEIGNKGDKGSKGDIGDKGNKGDKGDGGIKGNKGDKGSKGDKGSKGDKGDKGDEGI 687 HSP 14 Score: 58.151 bits (139), Expect = 2.271e-7 Identity = 74/236 (31.36%), Postives = 98/236 (41.53%), Query Frame = 0
Query: 198 ILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGES-----GVP-------------------------------GLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNP--ATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDA-PCPVGPDGLP 393
+ L+GE G G LG +G +GE G G G++G G G G + G+P GL G+ GD G G G G KG +G S G F GD+GD G G G G G+ + G G G +G KG GD GI G KG G +G G G +G+KG+ G +G G KGD G +G G+ +G +G+
Sbjct: 94 VGNLRGEKGEKGQLGIMGYKGEKGEIGSQGIKGMKGSDGLNGSTILFGQGLPRPYEGENGDVYIDKNTGIMYKKINGIWIPQVGLKGSQGDQGYKGDQGSKGDKGQKGEFGSAG-----FK-----------GDKGDMGQKGETGAKGDKGDKGEGSKGSKGDVGNKGDKGNKGDKGIKGDKGSEGIKGDNGIKGDNGTKGDNGTKGDNGTKGDKGDIGDNGIKGDKGDIGDNGIK 313
BLAST of isoform r vs. SwissProt
Match: gi|263413940|sp|B7Z0K8.1|COLL1_DROME (RecName: Full=Collagen alpha chain CG42342) HSP 1 Score: 112.849 bits (281), Expect = 1.680e-24 Identity = 116/296 (39.19%), Postives = 140/296 (47.30%), Query Frame = 0
Query: 139 GRKGLSGIPGRPGSSGSNGTPGKNGFPGEGG------------------------LKGQKGEIGSPGLELIDQKGD------YIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGDGIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDGLPLPGCGWRKSTE 404
G +GL G+PG PG G G PG G PGE G +KG KG+ G ++ ++ D ++ T E + G PG GP G G+QGE GL DG +G PG G KG+ G GLPG G GE G G G+ G PG +G+ G G G PG+PG TDGIPGQ+G RG++G +GDAGP G KRGRKGD+GD G G PGLDAPCP+G DGLPLPGCGWR E
Sbjct: 527 GPRGLDGLPGEPGIEGPPGLPGYQGPPGEKGDRGDIGPPGLMGPPGLPGPPGYPGVKGDKGDRGDSYRKMRRRQDDGMSDAPHMPTIEYLYGPPGPPGPMGPPGHTGSQGERGL---DGRKGDPGEKGHKGDQGPMGLPGPMGMRGESGPSGPSGKAGI-------------------------PGAQGETGHKGERGDPGLPG---TDGIPGQEGPRGEQGS--------RGDAGPPG---------------KRGRKGDRGDKGEQGVPGLDAPCPLGADGLPLPGCGWRPPKE 768 HSP 2 Score: 58.9214 bits (141), Expect = 1.228e-7 Identity = 64/167 (38.32%), Postives = 88/167 (52.69%), Query Frame = 0
Query: 148 GRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELID----------------------------QKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAII 286
G G G NG G+ G G+ G KGQKG++G PG+++ Q+ V+ ++ LKGEPG PGP GP G G+PG PG G G G GP+GE+G PG+ G PG +G PG+ G+ G +GDRG+ +++ G +FPT II
Sbjct: 264 GEKGDPGLNGISGEKGAAGKPGDKGQKGDVGHPGMDVFQTVKGLKRSVTTLHGGTLGYAEIVAVKDLQEAGVNVSASTVIKLKGEPGEPGPPGPPGEAGQPGAPGERGPPGEIGAQGPQGEAGQPGVAGPPGVAGAPGTKGDKGDRGDRGLTTTI--KGDEFPTGII 428
BLAST of isoform r vs. nr
Match: gi|1325326855|ref|XP_023345278.1| (collagen alpha chain CG42342-like [Eurytemora affinis]) HSP 1 Score: 171.785 bits (434), Expect = 3.721e-42 Identity = 175/437 (40.05%), Postives = 226/437 (51.72%), Query Frame = 0
Query: 40 WSILLLDQNQSQTINDVFVLRSHLALANAQASMYAEKLLTLQEELVRISLLVTNREESP-------TGWNVNLGEKQPWLLT------------------RPKRQILG-GECNCPPGP------------AGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGS-PGLELIDQKG----DYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKG---DRGMVSSVGGMGADFPTAIIEGPPGPP------------GDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDGLPLPGCGWRKSTEAFPGSGTGIATTD 417
+S L DQN +T DV L+S+ + + + + +Q E + L NR +S T ++ W + RP ++ G G C CPPGP G+ G G G GI G PG G +G G+ G G+KG KGE G+ G + + + Y V ++L+LKGEPG PG LGP G G G G DG+QG+PG G G G PG PGN G G+PG PG+PG KG DRGM+SSV G D PTAI+EGPPGPP G G PG PG+DGK G G+ G+PG+ G+RG+KG G+ G G G G +G KG+PG++G+ GE G RG++G KGDMG GPPGLDAPCP GPDGLP+P CGWR + P + I +
Sbjct: 98 FSDLTTDQNTLKT--DVSKLKSYSSELKSDFASLKHEFAMVQSEFAYYASLEKNRRDSTVLDERKLTRVKRETEHQKDWWWSGSERLARQIQSIEEKQQQRPAQEFEGSGSCTCPPGPRGKRGKKGRKGDTGRVGPPGIPGKPGIQGIPGPVGLDGIKGEQGI---AGIKGNKGEAGAGSGYQFMTRNEVLSRGYQVPDNEVLVLKGEPGEPGDLGPQGPPGPQGKHGIDGLQGKPGLDGSPGIPGEPGKPGNQGKDGKPGMPGKPGEKGPKGDRGMLSSVTG---DLPTAILEGPPGPPGPPGDNGKPGEMGPTGKPGVPGQDGKRGKKGDTG-QGLPGEKGERGEKGTKGELGTLGVDGFPGLKGEKGDPGVNGTPGEPGVRGKRGKKGDMGPSGPPGLDAPCPTGPDGLPIPSCGWRSGIQLGPDTDLAIGKLN 525
BLAST of isoform r vs. nr
Match: gi|1036748792|ref|XP_017039669.1| (PREDICTED: collagen alpha chain CG42342 isoform X19 [Drosophila ficusphila]) HSP 1 Score: 145.976 bits (367), Expect = 4.629e-33 Identity = 131/281 (46.62%), Postives = 163/281 (58.01%), Query Frame = 0
Query: 148 GRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELID-----QKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAII------------------EGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDGLPLPGCGWRKSTE 404
G G G NG G+ G G+ G KGQKG++G PG+++ Q+ V+ ++ LKGEPG PGP GP G G+PG+PG G G G G +GE+G PG+ G PG +G PG+ G+ G +GDRG+ +++ G +FPT II G PGP G G PG+ G GK G G P DG+ G G+ G KG GD G+PG G G GP+GE G G G GKRGRKGD+GD G G PGLDAPCP+G DGLPLPGCGWR E
Sbjct: 256 GEKGDPGLNGISGEKGAAGKPGDKGQKGDVGHPGMDVFQTVKDLQEAGVNVSASTVIQLKGEPGEPGPPGPPGEAGQPGVPGERGPPGETGAQGVQGEAGQPGVAGPPGVAGAPGTKGDKGDRGDRGLTTTI--KGDEFPTGIIEGPPGPAGPPGPPGEPGIRGEPGPIGPAGPPGEKGPRGKRGKRGPPGLDGMKGAQGETGHKGERGDPGLPGTDGIPGQEGPRGEQGSRGDAGPPGKRGRKGDRGDKGEQGVPGLDAPCPLGADGLPLPGCGWRPPKE 534
BLAST of isoform r vs. nr
Match: gi|442619460|ref|NP_001262640.1| (uncharacterized protein Dmel_CG42342, isoform R [Drosophila melanogaster] >gi|440217504|gb|AGB96020.1| uncharacterized protein Dmel_CG42342, isoform R [Drosophila melanogaster]) HSP 1 Score: 145.206 bits (365), Expect = 8.249e-33 Identity = 132/281 (46.98%), Postives = 163/281 (58.01%), Query Frame = 0
Query: 148 GRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELID-----QKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAII------------------EGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDGLPLPGCGWRKSTE 404
G G G NG G+ G G+ G KGQKG++G PG+++ Q+ V+ ++ LKGEPG PGP GP G G+PG PG G G G GP+GE+G PG+ G PG +G PG+ G+ G +GDRG+ +++ G +FPT II G PGP G G PG+ G GK G G P DG+ G G+ G KG GD G+PG G G GP+GE G G G GKRGRKGD+GD G G PGLDAPCP+G DGLPLPGCGWR E
Sbjct: 264 GEKGDPGLNGISGEKGAAGKPGDKGQKGDVGHPGMDVFQTVKDLQEAGVNVSASTVIKLKGEPGEPGPPGPPGEAGQPGAPGERGPPGEIGAQGPQGEAGQPGVAGPPGVAGAPGTKGDKGDRGDRGLTTTI--KGDEFPTGIIEGPPGPAGPPGPPGEPGARGEPGPIGPAGPPGEKGPRGKRGKRGPPGLDGMKGAQGETGHKGERGDPGLPGTDGIPGQEGPRGEQGSRGDAGPPGKRGRKGDRGDKGEQGVPGLDAPCPLGADGLPLPGCGWRPPKE 542
BLAST of isoform r vs. nr
Match: gi|1036671333|ref|XP_016947946.1| (PREDICTED: collagen alpha chain CG42342 isoform X18 [Drosophila biarmipes]) HSP 1 Score: 143.28 bits (360), Expect = 3.776e-32 Identity = 166/451 (36.81%), Postives = 212/451 (47.01%), Query Frame = 0
Query: 21 LVSLYVLASVCLASFCYCVWSILLLDQNQSQTINDVFVLRSHLALANAQASMYAEKLLTLQEELVRISLLVTNRE--ESPTGWNVNLGEKQPWLLT------RPKRQILG-----------------------------GECNCPPGPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGL------KGQKGEIGSPGLELID-----QKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAII------------------EGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDGLPLPGCGWRKSTE 404
+SL +AS L C C +S L + + L + + E+ L + +L +N ES TG N G Q L R +R + G+C C AG G G +G G G+ G SG G PG NG GE G KGQKG++G PG+++ Q+ V+ ++ LKGEPG PGP GP G G+PG+PG G G G G +GE+G PG+ G PG +G PG+ G+ G +GDRG+ +++ G +FPT II G GP G G PG+ G GK G G P DG+ G G+ G KG GD G+PG G G GP+GE G G G GKRGRKGD+GD G G PGLDAPCP+G DGLPLPGCGWR E
Sbjct: 95 FISLLHVASYVL---CLCAFSFALYGNVRQTRLEQRMQRLQQLDARIVELELRLEQQQLLHWPADQTQILSSNPSGGESATGSGSNNGSSQHLALHVRRELHRLRRDVSHLQLTRRQQRRQAAEAAAAAAASGEGGSGVGQCQCQ---AGPPGPPGPQGKRGKRGKKGDSGEKGDPGLNGISGEKGAAGKPGDKGQKGDVGHPGMDVFQTVKDLQEAGVNVSASTVIQLKGEPGEPGPPGPPGEAGQPGVPGERGPPGETGAQGVQGEAGQPGIAGPPGVAGAPGTKGDKGDRGDRGLTTTI--KGDEFPTGIIEGPPGPPGPPGPPGEPGIRGEAGPIGPAGPPGEKGPRGKRGKRGPPGLDGMKGAQGETGHKGERGDPGLPGTDGIPGQEGPRGEQGSRGDAGPPGKRGRKGDRGDKGEQGVPGLDAPCPLGADGLPLPGCGWRPPKE 537
BLAST of isoform r vs. nr
Match: gi|1236455647|ref|XP_022222608.1| (collagen alpha chain CG42342 isoform X21 [Drosophila obscura]) HSP 1 Score: 142.124 bits (357), Expect = 9.060e-32 Identity = 133/281 (47.33%), Postives = 162/281 (57.65%), Query Frame = 0
Query: 148 GRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELID-----QKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPG------------------DPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDGLPLPGCGWRKSTE 404
G G G NG G+ G G+ G KGQKG+ G PG+++ Q+ V+ ++ LKGEPG PGP GP G G+PG+PG G G G G +GE+G G G PG SG PG+ G+ G +GDRG+ +++ G +FPT IIEGPPGP G G PG + G GK G G P DG+ G G+ G KG GD G+PG G G GP+GE G G G GKRGRKGD+GD G G PGLDAPCP+G DGLPLPGCGWR E
Sbjct: 257 GDKGEGGLNGISGEKGAAGKPGDKGQKGDTGHPGMDVFQTVKDLQEAGVNVSASTVIQLKGEPGEPGPPGPAGEPGQPGVPGERGPPGETGAQGVQGEAGQAGPAGPPGVSGAPGTKGDKGDRGDRGLTTTI--KGDEFPTGIIEGPPGPAGPPGPPGEPGVPGEAGPIGPAGPPGEKGPRGKRGKRGPPGLDGMKGAQGETGHKGERGDPGLPGTDGIPGQEGPRGEQGSRGDAGPPGKRGRKGDRGDKGEQGVPGLDAPCPLGADGLPLPGCGWRPPKE 535
BLAST of isoform r vs. nr
Match: gi|1316133556|ref|XP_023221082.1| (collagen alpha chain CG42342-like isoform X3 [Centruroides sculpturatus]) HSP 1 Score: 141.739 bits (356), Expect = 1.656e-31 Identity = 132/309 (42.72%), Postives = 154/309 (49.84%), Query Frame = 0
Query: 130 GPAGKRGKRGRKGLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGS---PGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGP-KGESGVPG-----------------------LPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMG----------LVGPPGLDAPCPVGPDGLPLPGCGWR 400
GP G G +G KG SG+ G G+ G G PG G G GL G+ GEIG PGL+ G PGP G G +G+ GLPG G G PGP P K V G + G PG GE G+ G+ G GD+G +G MG PGP G RGDPG PG+DGK G G P DG+ G+ G+ GKKG G+ G+PG G G G KGEPG G G RGKRG++G+KGD G G PGLDAPCP+GPDGLPLPGCGWR
Sbjct: 335 GPPGIPGLKGDKGNSGVKGEKGTRGDIGLPGPRGLMGPPGLYGKNGEIGPQGPPGLQ----------------------GQPGPKGDKGLKGDIGLPGLMGSPGLPGPPAPIKFIKSVDGNYHGTREFLIGPPGPAGRPGAPGIQGPPGIKGERGTDGQKGEMGDKGEKGEMGPMGL----------PGPMGLRGDPGIPGKDGKMGYRGPPGLDGMKGERGELGKKGEKGEPGLPGTDGIPGLSGSKGEPGDPGQLGPRGKRGKRGEKGDKGDQFIKTLYLNFQGVPGLDAPCPLGPDGLPLPGCGWR 611 HSP 2 Score: 67.781 bits (164), Expect = 4.854e-8 Identity = 147/383 (38.38%), Postives = 193/383 (50.39%), Query Frame = 0
Query: 61 SHLALANAQASMYA-----EKLLTLQEELVRISLLVTNREESPTGWNVNLGEKQPWLLTRPKRQILGGECNCPPGPAGKRGKRGRK------------------------GLSGIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEI-----GSPGL-ELIDQKG----DYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGE---PGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGD---PGRDGKPGM----PGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGP---------RGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAP 384
LAL + ASM+ ++ L++E + L + + ++ V L ++ R KR ++ EC CPPGP GKRGKRGRK G+ G G PG GS G G++G KG K + G+ G E+I K ++P ++++KGE G GP GP G G GLPG+DG G PG GP GE+G+PG PG G G+ PG G+ G KGDRG+ +++ G FPT IEGPPGPPG G G G+DG+PG PG P G G G +G+KG GD G+PGP+G GP GP+G PGL G G +G +G KGD G GL+G PGL P
Sbjct: 44 CFLALFLSAASMFKLFRLEGRVQQLEDECRQYQLRIDSLNQA----EVLLKQRAEQEEKRRKRDVVAAECMCPPGPPGKRGKRGRKGEVGDQGLPGPMGPPGKPGFPGAIGIDGPKGDPGDKGSKGDKGESGIDLFTPTKGTKRSLSRLHGGTLGFAEVIGIKDLASLGITLSPGDLVLVKGEQGPAGPPGPAGPAGPTGLPGFDGRVGLPGEPGPPGETGMPGSPGPAGPVGKDGMPGPKGDKGDKGDRGLTTTLDGNA--FPTGFIEGPPGPPGPPGPAGPPGRKGKDGRPGKARGPPGIPGLKGDKGNSGVKGEKGTRGDIGLPGPRGLMGPPGLYGKNGEIGPQGPPGLQGQPGPKGDKGLKGDIGLPGLMGSPGLPGP 420
BLAST of isoform r vs. nr
Match: gi|1316133560|ref|XP_023221102.1| (collagen alpha chain CG42342-like isoform X5 [Centruroides sculpturatus]) HSP 1 Score: 139.813 bits (351), Expect = 6.682e-31 Identity = 132/308 (42.86%), Postives = 164/308 (53.25%), Query Frame = 0
Query: 134 KRGKRGRKGLS----GIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPG------------------------------------LPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDGLPLPGCGWR 400
++GK GR G + GIPG G G++G G+ G G+ GL G +G +G PGL + G+ + P+ L+G+PG G G G+ G PGL G G+ G PG G KGE G G + G PG GE G+ G+ G GD+G +G MG PGP G RGDPG PG+DGK G G P DG+ G+ G+ GKKG G+ G+PG G G G KGEPG G G RGKRG++G+KGD G G PGLDAPCP+GPDGLPLPGCGWR
Sbjct: 323 RKGKDGRPGKARGPPGIPGLKGDKGNSGVKGEKGTRGDIGLPGPRGLMGPPGL--YGKNGE--IGPQGPPGLQGQPGPKGDKGLKGDIGLPGLMGSPGLPGPPGKTGSKGEKGNKGDLAPIKFIKSVDGNYHGTREFLIGPPGPAGRPGAPGIQGPPGIKGERGTDGQKGEMGDKGEKGEMGPMGL----------PGPMGLRGDPGIPGKDGKMGYRGPPGLDGMKGERGELGKKGEKGEPGLPGTDGIPGLSGSKGEPGDPGQLGPRGKRGKRGEKGDKGDQGVPGLDAPCPLGPDGLPLPGCGWR 616
BLAST of isoform r vs. nr
Match: gi|1316133554|ref|XP_023221073.1| (collagen alpha chain CG42342-like isoform X2 [Centruroides sculpturatus]) HSP 1 Score: 139.813 bits (351), Expect = 7.516e-31 Identity = 132/308 (42.86%), Postives = 164/308 (53.25%), Query Frame = 0
Query: 134 KRGKRGRKGLS----GIPGRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELIDQKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPG------------------------------------LPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIEGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDGLPLPGCGWR 400
++GK GR G + GIPG G G++G G+ G G+ GL G +G +G PGL + G+ + P+ L+G+PG G G G+ G PGL G G+ G PG G KGE G G + G PG GE G+ G+ G GD+G +G MG PGP G RGDPG PG+DGK G G P DG+ G+ G+ GKKG G+ G+PG G G G KGEPG G G RGKRG++G+KGD G G PGLDAPCP+GPDGLPLPGCGWR
Sbjct: 323 RKGKDGRPGKARGPPGIPGLKGDKGNSGVKGEKGTRGDIGLPGPRGLMGPPGL--YGKNGE--IGPQGPPGLQGQPGPKGDKGLKGDIGLPGLMGSPGLPGPPGKTGSKGEKGNKGDLAPIKFIKSVDGNYHGTREFLIGPPGPAGRPGAPGIQGPPGIKGERGTDGQKGEMGDKGEKGEMGPMGL----------PGPMGLRGDPGIPGKDGKMGYRGPPGLDGMKGERGELGKKGEKGEPGLPGTDGIPGLSGSKGEPGDPGQLGPRGKRGKRGEKGDKGDQGVPGLDAPCPLGPDGLPLPGCGWR 616
BLAST of isoform r vs. nr
Match: gi|1037047960|ref|XP_017103144.1| (PREDICTED: collagen alpha chain CG42342 isoform X19 [Drosophila bipectinata]) HSP 1 Score: 139.043 bits (349), Expect = 9.258e-31 Identity = 130/287 (45.30%), Postives = 162/287 (56.45%), Query Frame = 0
Query: 148 GRPGSSGSNGTPGKNGFPGEGGLKGQKGEIGSPGLELID-----QKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAIIE------------------------GPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDGLPLPGCGWRKSTE 404
G G G NG G+ G G+ G KGQKG+ G PG+++ Q+ V+ ++ LKGEPG PGP GP G G+PG PG G G G G +GE+G PG G PG +G PG+ G+ G +GDRG+ +++ G +FPT IIE GP GPPG++G G G+ G PG+ DG+ G G+ G KG GD G+PG G G GP+GE G G G GKRGRKGD+GD G G PGLDAPCP+G DGLPLPGCGWR E
Sbjct: 258 GDKGEPGLNGISGEKGAAGKPGDKGQKGDTGHPGMDVFQTVKDLQEAGVNVSASTVIQLKGEPGEPGPPGPPGEAGQPGAPGERGAPGEAGAPGLQGEAGQPGPVGPPGVAGAPGTKGDKGDRGDRGLTTTI--KGDEFPTGIIEGPPGPPGPPGPPGEPGERGEAGATGPAGPPGEKGPRGKRGKRGPPGL------DGMKGAQGETGHKGERGDPGLPGTDGIPGQEGPRGEQGSRGDAGPPGKRGRKGDRGDKGEQGVPGLDAPCPLGADGLPLPGCGWRPPKE 536
BLAST of isoform r vs. nr
Match: gi|1036791385|ref|XP_017111116.1| (PREDICTED: collagen alpha chain CG42342 isoform X14 [Drosophila elegans]) HSP 1 Score: 138.272 bits (347), Expect = 1.561e-30 Identity = 130/275 (47.27%), Postives = 161/275 (58.55%), Query Frame = 0
Query: 154 GSNGTPGKNGFPGEGGLKGQKGEIGSPGLELID-----QKGDYIVTPEQILMLKGEPGAPGPLGPLGNQGEPGLPGYDGVQGRPGPIGPKGESGVPGLPGNPGDSGEPGSPGEPGRKGDRGMVSSVGGMGADFPTAII------------------EGPPGPPGDRGDPGDPGRDGKPGMPGNPATDGIPGQDGKRGKKGRDGD-GIPGPKGDAGPRGPKGEPGLHGSKGERGKRGRKGDKGDMGLVGPPGLDAPCPVGPDGLPLPGCGWRKSTE 404
G NG G+ G G+ G KGQKG++G PG+++ Q+ V+ ++ LKGEPG PGP GP G G+PG PG G G G GP+GE+G PG+ G PG +G PG+ G+ G +GDRG+ +++ G +FPT II G PGP G G PG+ G GK G G P DG+ G G+ G KG GD G+PG G G GP+GE G G G GKRGRKGD+GD G G PGLDAPCP+G DGLPLPGCGWR E
Sbjct: 264 GMNGISGEKGAAGKPGDKGQKGDVGHPGMDVFQTVKDLQEAGVNVSASTVIQLKGEPGEPGPPGPPGEAGQPGGPGERGPPGETGAQGPQGEAGQPGIAGPPGQAGAPGTKGDKGDRGDRGLTTTI--KGDEFPTGIIEGPPGPAGPPGPPGEPGVRGEPGPIGPAGPPGEKGPRGKRGKRGPPGLDGMKGAQGETGHKGERGDPGLPGTDGIPGQEGPRGEQGSRGDAGPPGKRGRKGDRGDKGEQGVPGLDAPCPLGADGLPLPGCGWRPPKE 536 The following BLAST results are available for this feature:
BLAST of isoform r vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 9
BLAST of isoform r vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of isoform r vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold831_size90909:41961..47492- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold831_size90909-snap-gene-0.19 ID=maker-scaffold831_size90909-snap-gene-0.19|Name=isoform r|organism=Tigriopus kingsejongensis|type=gene|length=5532bp|location=Sequence derived from alignment at scaffold831_size90909:41961..47492- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'isoform r' has the following synonyms
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