L-selectin, maker-scaffold85_size395806-snap-gene-1.16 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of L-selectin vs. L. salmonis genes
Match: EMLSAG00000010831 (supercontig:LSalAtl2s:LSalAtl2s71:261472:278274:-1 gene:EMLSAG00000010831 transcript:EMLSAT00000010831 description:"augustus_masked-LSalAtl2s71-processed-gene-2.2") HSP 1 Score: 280.026 bits (715), Expect = 3.713e-96 Identity = 121/216 (56.02%), Postives = 164/216 (75.93%), Query Frame = 0 Query: 30 LICIVILSIVSLPPSFF--PLTGVQAQDEGKLALPNAKDCRDRILNAKFNGTRYFFSWEYAPTQDMNVTWFQGRNVCRRHCMDLVSLETAEESEFIKNQLIQSSIRYIWTSGRKCNFDGCERQDLQPTIINGWFWSGSGIRLGPTDNTLDGDWGRKGGDGQAQPDNRELRVTGKNDEACLAVLNNFYGDGVVWHDIACYHKKPFVCEDNPKLLKFI 243 +I + +S +L F P+ + G L LPN DCR+RI++A F G +YFFSWEY+ TQ+++V W N+CRRHCMD VS+ET EE++FI+N+++ + R+ WTSGRKC+F+GC+R DLQPT INGWFWSGSG+RLG + ++GDW GGDG+AQPDNRE RV G+++E+C+AV+NNFY DG+VWHDIACYHKKPFVCE + +L+ +I Sbjct: 1 MILKLAISFSTLFIILFIQPVHSQKGSGNGDLQLPNESDCRNRIIHASFGGKQYFFSWEYSLTQNLSVNWITAXNICRRHCMDTVSIETLEENQFIENRMLLTGTRFTWTSGRKCDFEGCDRPDLQPTHINGWFWSGSGVRLGSRNGRVEGDWSNTGGDGEAQPDNREFRVKGEHEESCIAVMNNFYNDGIVWHDIACYHKKPFVCESSDQLMDYI 216
BLAST of L-selectin vs. L. salmonis genes
Match: EMLSAG00000002645 (supercontig:LSalAtl2s:LSalAtl2s1534:3975:5135:-1 gene:EMLSAG00000002645 transcript:EMLSAT00000002645 description:"augustus_masked-LSalAtl2s1534-processed-gene-0.4") HSP 1 Score: 159.844 bits (403), Expect = 1.460e-48 Identity = 93/245 (37.96%), Postives = 128/245 (52.24%), Query Frame = 0 Query: 30 LICIVILSIVSLPPSFFPLTGVQAQDEGKLALPNAKDCRDRILNAKFNGTRYFFSWEYAPTQDMNVTWFQGRNVCRRHCMDLVSLETAEESEFIKNQLIQSSIRYIWTSGRKCNFDG--CERQDLQPTIINGWFWSGSG-IRLGPTDN-TLDGDWGRKGGDGQAQPDNRELRVTGK------------------NDEACLAVLNNFYGDGVVWHDIACYHKKPFVCEDNPKLLKFIEDSNPGIRL 252 ++CI +L V L S P G + L PN C++RI + K YF SW + + WF R+ CR CMDL+SLE++ E + + + Q I+ IWTSGRKCNF G C++ QP + GWFWSG+G RL PT+ + W + G + QPDN E G +DEACL VLNN + DG+ WHD AC+ + P VCED+ +LL NPG+++ Sbjct: 9 ILCITLLLGVVLAQSK-PKIGPDGRP--LLNAPNITLCQNRISHGKLGXHHYFLSWREPWHKFEDWDWFNARSFCRERCMDLISLESSTEFKMFQEVMEQDKIKSIWTSGRKCNFQGKGCDKPKFQPINVRGWFWSGAGNSRLPPTNKRNKNTYWSKTGKAKKPQPDNFEGLKAGXLTNVTDPVGLTIEGLQEWHDEACLIVLNNAFKDGISWHDSACHIRSPIVCEDSEELLARARRENPGVKI 250
BLAST of L-selectin vs. L. salmonis genes
Match: EMLSAG00000003466 (supercontig:LSalAtl2s:LSalAtl2s18:1138333:1258359:1 gene:EMLSAG00000003466 transcript:EMLSAT00000003466 description:"augustus_masked-LSalAtl2s18-processed-gene-12.0") HSP 1 Score: 151.754 bits (382), Expect = 7.283e-46 Identity = 82/167 (49.10%), Postives = 102/167 (61.08%), Query Frame = 0 Query: 79 TRYFFSWEYAPTQDMNVTWFQGRNVCRRHCMDLVSLET-AEESEFIKNQLIQSSIRYIWTSGRKCNFDGCERQDLQPTIINGWFWSGSGIRL-GP-TDNTLDGDWGRKGGDGQAQPDNRELRVTGKNDEACLAVLNNFYGDGVVWHDIACYHKKPFVCEDNPKLLKF 242 + Y FSW+ + TW QGR+ CR CMDL+SL+ E +K+ LI+ I YIWTSGRKCNF GC+ LQP I NGWFW+ + IR+ P W + G QPDNRE +T DE CLAVLNN Y DG+ WHD+AC+HKKP +CE +LKF Sbjct: 62 SSYHFSWKVDSQKTF--TWQQGRDYCRTLCMDLLSLDDGVTEWNAMKSFLIRDDIPYIWTSGRKCNFKGCDHFSLQPPITNGWFWASNKIRIPNPFASKCQHCVWSKTG----PQPDNRE-GITAGRDEXCLAVLNNVYNDGITWHDVACHHKKPVICESRRFVLKF 221
BLAST of L-selectin vs. L. salmonis genes
Match: EMLSAG00000009947 (supercontig:LSalAtl2s:LSalAtl2s64:564480:569869:1 gene:EMLSAG00000009947 transcript:EMLSAT00000009947 description:"maker-LSalAtl2s64-augustus-gene-5.19") HSP 1 Score: 149.828 bits (377), Expect = 1.675e-45 Identity = 68/138 (49.28%), Postives = 91/138 (65.94%), Query Frame = 0 Query: 125 NQLIQSSIRYIWTSGRKCNFDGCERQDLQPTIINGWFWSGSGIRLGPTDNTLDG----DWGRKG------GDGQAQPDNRELRVTGKNDEACLAVLNNFYGDGVVWHDIACYHKKPFVCEDNPKLLKFIEDSNPGIRL 252 ++ + + YIWTSGRKCNF GCER+DLQP + GW WSGSG+++ PT++T G W G G QPDN E + ++DEAC+ LN+ Y DGV WHDIACYHKK ++CED+P LL+F+ SNP + + Sbjct: 54 DKCVNQELPYIWTSGRKCNFKGCEREDLQPVNVYGWXWSGSGVKMAPTNSTPPGWDFQPWSFTGHKTSFAGKNIPQPDNAEYEI-NQSDEACMGFLNDIYNDGVTWHDIACYHKKSYICEDSPSLLEFVRKSNPKLVI 190
BLAST of L-selectin vs. L. salmonis genes
Match: EMLSAG00000010141 (supercontig:LSalAtl2s:LSalAtl2s66:535673:559564:-1 gene:EMLSAG00000010141 transcript:EMLSAT00000010141 description:"maker-LSalAtl2s66-snap-gene-5.20") HSP 1 Score: 147.517 bits (371), Expect = 1.197e-44 Identity = 77/171 (45.03%), Postives = 102/171 (59.65%), Query Frame = 0 Query: 95 VTWFQGRNVCRRHCMDLVSLETAEESEFIKNQLIQSSIRYIWTSGRKCNFDGCERQDLQPTIINGWFWSGSGIRLGPTDNTLDG----DWGRKGGDGQ-------AQPDNRE--LRVTGKNDEACLAVLNNFYGDGVVWHDIACYHKKPFVCEDNPKLLKFIEDSNPGIRL 252 W RN+CR CMDL+S+E+ E+E I+ + + +R +WTSGR CNF GC++ LQP N WFWSGSG R+ T++T G W R G GQ QPDN E L+ N EACL++ NN+Y DG+ WHD ACY KK F+CED+ L++ NP I+ Sbjct: 15 ANWLDARNLCRELCMDLISIESPIENELIQQIIAEKGLRDVWTSGRLCNFKGCDKPHLQPR--NVWFWSGSGERIYATNSTPPGWPEKPWSRTGYIGQFLENRDVPQPDNAEYLLKPDLVNVEACLSINNNWYDDGIAWHDSACYRKKSFICEDSEPLMRKARSYNPNIKF 183
BLAST of L-selectin vs. L. salmonis genes
Match: EMLSAG00000001607 (supercontig:LSalAtl2s:LSalAtl2s127:8943:10420:1 gene:EMLSAG00000001607 transcript:EMLSAT00000001607 description:"maker-LSalAtl2s127-augustus-gene-0.12") HSP 1 Score: 147.132 bits (370), Expect = 3.412e-43 Identity = 83/209 (39.71%), Postives = 120/209 (57.42%), Query Frame = 0 Query: 57 GKLALPNAKDC---RDRILNAKFNGTRYFFSWEYAPTQDMNV--TWFQGRNVCRRHCMDLVSLETAEESEFIKNQLIQSSIRYIWTSGRKCN--FDGCERQD-LQPTIINGWFWSGSGIRLGPTDNTLDG----DWGRKGGDGQAQPDNRELRVTGKNDEACLAVLNNFYGDGVVWHDIACYHKKPFVCEDNP-KLLKFIEDSNPGIRL 252 G + LP A C ++R+ + FNG Y+ SW N WF GRN CR+ CMD++SLE+ E F + + S I+ I TSGR C+ +GC++Q QP INGWFW + + PT++ +G +W G GQ QPD EL+ G EAC+A+L+N YGDGV WHD C +++ +CED P + F+ + NPG+++ Sbjct: 90 GTVCLPEANLCSTRKERVGHYSFNGKSYWASWVSNEPALRNARWNWFTGRNYCRKMCMDMISLESQAEQNFAADLMRASGIKDIPTSGRLCDAEVEGCDKQPRFQPLKINGWFWXATLQMMPPTNSPSNGRVFNNWSPTGPAGQPQPDG-ELKSDGFGKEACMALLDNKYGDGVRWHDEPCNNRRVILCEDLPLPNINFVRNQNPGVKI 297
BLAST of L-selectin vs. L. salmonis genes
Match: EMLSAG00000000915 (supercontig:LSalAtl2s:LSalAtl2s115:403109:404569:-1 gene:EMLSAG00000000915 transcript:EMLSAT00000000915 description:"augustus_masked-LSalAtl2s115-processed-gene-5.0") HSP 1 Score: 140.584 bits (353), Expect = 1.270e-40 Identity = 78/194 (40.21%), Postives = 103/194 (53.09%), Query Frame = 0 Query: 75 KFNGTRYFFSWEYAPTQDMNVTWFQGRNVCRRHCMDLVSLETAEESEFIKNQLIQSSIRYIWTSGRKCNFDG--CERQDLQPTIINGWFWSGSGIRLGP--TDNTLDGDWGRKGGDGQAQPDNRELRVTGK-----------------NDEACLAVLNNFYGDGVVWHDIACYHKKPFVCEDNPKLLKFIEDSN 247 ++ G YF SW + + WF GRN CR CMDL+S +T EE + + ++ I+TSGRKCNF G C+ LQP NGWFW+G+G P + T + W G GQ QPDN E G +DEACLA LNN Y DG+ WHD+AC+ + VCED+ +LL+ I+ N Sbjct: 2 EWGGHNYFISWREPWHKFEDWDWFNGRNFCRDRCMDLISFDTPEEFKTFAKIMQADNVSSIYTSGRKCNFKGKGCDASHLQPINANGWFWAGAGNTRIPDTSSQTSNTYWSFTGEQGQKQPDNFEGVKEGPIETEFDIGVTIEGLQEFHDEACLAALNNKYNDGISWHDVACHFRSVIVCEDSDQLLELIKKQN 195
BLAST of L-selectin vs. L. salmonis genes
Match: EMLSAG00000009572 (supercontig:LSalAtl2s:LSalAtl2s616:111240:140804:-1 gene:EMLSAG00000009572 transcript:EMLSAT00000009572 description:"maker-LSalAtl2s616-augustus-gene-1.39") HSP 1 Score: 119.783 bits (299), Expect = 2.896e-31 Identity = 60/125 (48.00%), Postives = 77/125 (61.60%), Query Frame = 0 Query: 56 EGKLALPNAKDCRDRIL---NAKFNGTRYFFSWEYAPTQDMNVTW--FQGRNVCRRHCMDLVSLETAEESEFIKNQLIQSSIRYIWTSGRKCNFDGCERQDLQPTIINGWFWSGSGIRLGPTDNT 175 +GKL P+ K C++R+ N + G Y+ SW Q N W F RN CR+ CMDLVS ET EE EFIK+Q+ ++Y WTSGR C+FDGC+R D P INGWFWS + RL P ++T Sbjct: 395 KGKLCFPDGKLCQERVSRSGNINYGGHLYWVSWLSTDPQLRNTNWDWFNARNYCRKRCMDLVSFETREEYEFIKSQM--GGVKYFWTSGRLCDFDGCDRPDFFPKQINGWFWSANQARLSPXNST 517
BLAST of L-selectin vs. L. salmonis genes
Match: EMLSAG00000006435 (supercontig:LSalAtl2s:LSalAtl2s351:588545:589440:-1 gene:EMLSAG00000006435 transcript:EMLSAT00000006435 description:"maker-LSalAtl2s351-snap-gene-6.35") HSP 1 Score: 86.2705 bits (212), Expect = 2.278e-20 Identity = 49/147 (33.33%), Postives = 75/147 (51.02%), Query Frame = 0 Query: 94 NVTWFQGRNVCRRHCMDLVSLETAEESEFIKNQLIQSSIRYIWTSGRKCNFDGC------ERQDLQPTIINGWFWSGSGIRLGPTDNTLDGDWGRKGGDGQAQPDNRELRVTGKNDEACLAVLNNFYGDGVVWHDIACYHKKPFVCE 234 N T + + CR + +SL+T +++ +I N L Q++ RY+WT GR + G R+ Q FWS +G G + QPDNR+ +E C+A+LNNFY DG+ WHD+AC+H+KP +C+ Sbjct: 151 NFTAQEADDYCRANAGRAISLDTTDKANYINNILAQNAQRYLWTGGRIDHNAGVVTWPSGAREGYQ---RGKRFWSYTG--------------GASKTEDVPQPDNRD------GNEVCIAILNNFYADGIRWHDVACHHRKPTICQ 274
BLAST of L-selectin vs. L. salmonis genes
Match: EMLSAG00000007572 (supercontig:LSalAtl2s:LSalAtl2s437:165026:167321:1 gene:EMLSAG00000007572 transcript:EMLSAT00000007572 description:"maker-LSalAtl2s437-augustus-gene-1.21") HSP 1 Score: 81.6481 bits (200), Expect = 3.297e-19 Identity = 50/140 (35.71%), Postives = 70/140 (50.00%), Query Frame = 0 Query: 99 QGRNVCRRHCMDLVSLETAEESEFIKNQLIQSSIRYIWTSGRKCNFDGCERQDLQPTIINGWFWSGSGIRLGPTDNTLDGDWGRKGGDGQA----QPDNRELRVTGKNDEACLAVLNNFYGDGVVWHDIACYHKKPFVCE 234 Q C+ + +SL+T ++ F+ +++ + RYIWT GR + T+ W SG+ G T W GG ++ QPDNR+ +E CLAVLNNFY DGV WHD+ C HKKP +CE Sbjct: 82 QADEYCQGNGGKTISLDTTDKGNFVNQLMVKYAQRYIWTGGRI--------NHARSTVT----WP-SGLSEGYTRGKRF--WSHTGGSSRSVDIPQPDNRD------GNEVCLAVLNNFYADGVKWHDVGCTHKKPTICE 200
BLAST of L-selectin vs. nr
Match: gi|290462301|gb|ADD24198.1| (L-selectin [Lepeophtheirus salmonis]) HSP 1 Score: 284.263 bits (726), Expect = 9.327e-94 Identity = 123/216 (56.94%), Postives = 165/216 (76.39%), Query Frame = 0 Query: 30 LICIVILSIVSLPPSFF--PLTGVQAQDEGKLALPNAKDCRDRILNAKFNGTRYFFSWEYAPTQDMNVTWFQGRNVCRRHCMDLVSLETAEESEFIKNQLIQSSIRYIWTSGRKCNFDGCERQDLQPTIINGWFWSGSGIRLGPTDNTLDGDWGRKGGDGQAQPDNRELRVTGKNDEACLAVLNNFYGDGVVWHDIACYHKKPFVCEDNPKLLKFI 243 +I +++S +L F P+ + G L LPN DCR+RI++A F G +YFFSWEY+ TQ++ V W RN+CRRHCMD VS+ET EE++FI+N+++ + R+ WTSGRKCNF+GC+R DLQPT INGWFWSGSG+RLG + ++GDW GGDG+AQPDNRE RV G+++E+C+AV+NNFY DG+VWHDIACYHKKPFVCE + +L+ +I Sbjct: 1 MILKLVISFSTLFIILFIQPVHSQKGSGNGDLQLPNKSDCRNRIIHASFGGKQYFFSWEYSLTQNLPVNWITARNICRRHCMDTVSIETLEENQFIENRMLLTGTRFTWTSGRKCNFEGCDRPDLQPTHINGWFWSGSGVRLGSRNGRVEGDWSNTGGDGEAQPDNREFRVKGEHEESCIAVMNNFYNDGIVWHDIACYHKKPFVCESSDQLMDYI 216
BLAST of L-selectin vs. nr
Match: gi|1325275373|ref|XP_023322357.1| (uncharacterized protein LOC111696842, partial [Eurytemora affinis]) HSP 1 Score: 281.952 bits (720), Expect = 3.891e-93 Identity = 123/194 (63.40%), Postives = 151/194 (77.84%), Query Frame = 0 Query: 57 GKLALPNAKDCRDRILNAKFNGTRYFFSWEYAPTQDMNVTWFQGRNVCRRHCMDLVSLETAEESEFIKNQLIQSSIRYIWTSGRKCNFDGCERQDLQPTIINGWFWSGSGIRLGPTDNTLDGDWGRKGGDGQAQPDNRELRVTGKNDEACLAVLNNFYGDGVVWHDIACYHKKPFVCEDNPKLLKFIEDSNPGI 250 G+L LPN KDC +RI +A FNG YFFSWEY T+D+ V W GRN+CRRHCMDLVS+ET EE+EF+K ++I IR+ WTSGRKCNF+GCER+DLQP I NGWFW+GSG+RLG D + GDW + GG G QPDNRE +V GK+DEAC+ VLNNFY DG VWHDIACYHKK F+CED+ L+ F + ++P + Sbjct: 15 GQLTLPNPKDCANRIRHADFNGHNYFFSWEYELTKDLKVDWLTGRNICRRHCMDLVSIETREENEFVKTRMINGLIRFFWTSGRKCNFEGCEREDLQPVIENGWFWAGSGVRLGSKDGRVTGDWSKTGGAGDPQPDNREFKVEGKHDEACIGVLNNFYADGAVWHDIACYHKKWFICEDSDTLMDFAKQASPAL 208
BLAST of L-selectin vs. nr
Match: gi|642922849|ref|XP_008200420.1| (PREDICTED: C-type lectin isoform X1 [Tribolium castaneum]) HSP 1 Score: 271.166 bits (692), Expect = 2.828e-88 Identity = 124/239 (51.88%), Postives = 162/239 (67.78%), Query Frame = 0 Query: 19 TQKLRWPSSALLICIVILSIVSLPPSFFPLTGVQAQDEGKLALPNAKDCRDRILNAKFNGTR-----YFFSWEYAPTQDMNVTWFQGRNVCRRHCMDLVSLETAEESEFIKNQLIQSSIRYIWTSGRKCNFDGCERQDLQPTIINGWFWSGSGIRLGPTDNTLDGDWGRKGGDGQAQPDNRELRVTGKNDEACLAVLNNFYGDGVVWHDIACYHKKPFVCEDNPKLLKFIEDSNPGIRL 252 ++L +S+LL+ ++ + + + + + +LALP+ + C R+ +A + R YFFSWE+ PT+ + V W RN+CRRHCMD VSLET +E+EFIK +L++ ++RYIWTSGRKCNF GCER DLQP INGWFWSGSG ++GPT GDW GG GQ QPDNRE NDE+CL++LNNFY DGV WHD+ACYH KPFVCED+ +LL F+ NPGIRL Sbjct: 17 VRQLIQSASSLLLAGILQAKMLRELTLLVVGAAMVMAQRRLALPDPRSCASRVRHATYRDARGVTHSYFFSWEHPPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFIKQRLVRGNVRYIWTSGRKCNFAGCERADLQPPNINGWFWSGSGAKIGPTTQRNSGDWSHTGGYGQPQPDNRE--AAQGNDESCLSILNNFYNDGVKWHDVACYHVKPFVCEDSEELLNFVASRNPGIRL 253
BLAST of L-selectin vs. nr
Match: gi|1061100679|ref|XP_017877126.1| (PREDICTED: L-selectin [Ceratina calcarata]) HSP 1 Score: 267.7 bits (683), Expect = 2.505e-87 Identity = 120/210 (57.14%), Postives = 152/210 (72.38%), Query Frame = 0 Query: 48 LTGVQAQDEGKLALPNAKDCRDRILNAKFNGTR-----YFFSWEYAPTQDMNVTWFQGRNVCRRHCMDLVSLETAEESEFIKNQLIQSSIRYIWTSGRKCNFDGCERQDLQPTIINGWFWSGSGIRLGPTDNTLDGDWGRKGGDGQAQPDNRELRVTGKNDEACLAVLNNFYGDGVVWHDIACYHKKPFVCEDNPKLLKFIEDSNPGIRL 252 L A + +LALP+ + C +R+ +A + R YFFSWE+ PT+ + V W RN+CRRHCMD VSLET +E+EFIK +L + ++RYIWTSGRKCNF+GC+R DLQP INGWFWSGSG ++GPT GDW GG GQAQPDNRE NDE+CL++LNNFY DG+ WHD+AC+H+KPFVCED+ +LL F+ NPGIRL Sbjct: 10 LVAAMANAQRRLALPDPRSCANRVRHATYRDARGVAHSYFFSWEHQPTRSLEVDWLDSRNICRRHCMDAVSLETPQENEFIKQRLARGNVRYIWTSGRKCNFNGCDRPDLQPQNINGWFWSGSGAKIGPTTQRNTGDWSHTGGYGQAQPDNRE--AAQGNDESCLSILNNFYNDGIKWHDVACHHRKPFVCEDSDELLNFVASRNPGIRL 217
BLAST of L-selectin vs. nr
Match: gi|987909685|ref|XP_015430487.1| (PREDICTED: L-selectin [Dufourea novaeangliae] >gi|1016161638|gb|KZC08800.1| hypothetical protein WN55_11303 [Dufourea novaeangliae]) HSP 1 Score: 266.929 bits (681), Expect = 4.519e-87 Identity = 120/210 (57.14%), Postives = 154/210 (73.33%), Query Frame = 0 Query: 48 LTGVQAQDEGKLALPNAKDCRDRILNAKFNGTR-----YFFSWEYAPTQDMNVTWFQGRNVCRRHCMDLVSLETAEESEFIKNQLIQSSIRYIWTSGRKCNFDGCERQDLQPTIINGWFWSGSGIRLGPTDNTLDGDWGRKGGDGQAQPDNRELRVTGKNDEACLAVLNNFYGDGVVWHDIACYHKKPFVCEDNPKLLKFIEDSNPGIRL 252 L GV + +LALP+ + C +R+ +A + R YFFSWE+ PT+++ V W RN+CRRHCMD VSLET +E+EFIK +L++ ++RYIWTSGRKCNF+GC+R DLQP +NGWFWSGSG ++G T GDW GG GQAQPDNRE NDE+CL++LNNFY DGV WHD+AC+H+KPFVCED+ +LL F+ NPGIRL Sbjct: 10 LAGVAVNAQRRLALPDPRSCANRVRHATYRDGRGVAHSYFFSWEHQPTRNLEVDWLDSRNICRRHCMDAVSLETPQENEFIKQRLVRGNVRYIWTSGRKCNFNGCDRPDLQPQNVNGWFWSGSGAKIGATTQRNSGDWSHTGGYGQAQPDNRE--AAQGNDESCLSILNNFYNDGVKWHDVACHHRKPFVCEDSDELLNFVVSRNPGIRL 217
BLAST of L-selectin vs. nr
Match: gi|340729763|ref|XP_003403165.1| (L-selectin [Bombus terrestris]) HSP 1 Score: 266.929 bits (681), Expect = 4.825e-87 Identity = 120/210 (57.14%), Postives = 153/210 (72.86%), Query Frame = 0 Query: 48 LTGVQAQDEGKLALPNAKDCRDRILNAKFNGTR-----YFFSWEYAPTQDMNVTWFQGRNVCRRHCMDLVSLETAEESEFIKNQLIQSSIRYIWTSGRKCNFDGCERQDLQPTIINGWFWSGSGIRLGPTDNTLDGDWGRKGGDGQAQPDNRELRVTGKNDEACLAVLNNFYGDGVVWHDIACYHKKPFVCEDNPKLLKFIEDSNPGIRL 252 L V A + +LALP+ + C +R+ +A + R YFFSWE+ PT+ + V W RN+CRRHCMD VSLET +E+EFIK ++ + ++RYIWTSGRKCNF+GC+R DLQP INGWFWSGSG ++GPT GDW GG GQAQPDNRE NDE+CL++LNNFY DG+ WHD+AC+H+KPFVCED+ +LL F+ NPGIRL Sbjct: 10 LVAVVANAQRRLALPDPRSCANRVRHATYRDARGVAHSYFFSWEHQPTRSLEVDWLDSRNICRRHCMDAVSLETPQENEFIKQRVARGNVRYIWTSGRKCNFNGCDRPDLQPQNINGWFWSGSGAKIGPTTQRNSGDWSHTGGYGQAQPDNRE--AAQGNDESCLSILNNFYNDGIKWHDVACHHRKPFVCEDSDELLNFVLSRNPGIRL 217
BLAST of L-selectin vs. nr
Match: gi|998522708|ref|XP_015522443.1| (PREDICTED: uncharacterized protein LOC107226222 [Neodiprion lecontei]) HSP 1 Score: 266.544 bits (680), Expect = 5.382e-87 Identity = 123/213 (57.75%), Postives = 154/213 (72.30%), Query Frame = 0 Query: 45 FFPLTGVQAQDEGKLALPNAKDCRDRILNAKFNGTR-----YFFSWEYAPTQDMNVTWFQGRNVCRRHCMDLVSLETAEESEFIKNQLIQSSIRYIWTSGRKCNFDGCERQDLQPTIINGWFWSGSGIRLGPTDNTLDGDWGRKGGDGQAQPDNRELRVTGKNDEACLAVLNNFYGDGVVWHDIACYHKKPFVCEDNPKLLKFIEDSNPGIRL 252 FF L V AQ +LALP+ + C +R+ ++ + R YFFSWE+APT+ + V W RN+CRRHCMD VSLET +E+EFIK ++ + +I+YIWTSGRKCNF+GC R DLQP INGWFWSGSG ++GPT GDW GG GQAQPDNRE NDE+CL++LNNFY DG+ WHD+AC+H KPFVCED+ +LL F+ NPGIRL Sbjct: 9 FFMLVAVTAQR--RLALPDPRSCANRVRHSTYRDARNVAHSYFFSWEHAPTRGLEVDWLDARNICRRHCMDAVSLETPQENEFIKQRIARGNIKYIWTSGRKCNFNGCNRADLQPQNINGWFWSGSGAKIGPTTKRDSGDWSATGGYGQAQPDNRE--AAQGNDESCLSILNNFYNDGIKWHDVACHHLKPFVCEDSDELLNFVASRNPGIRL 217
BLAST of L-selectin vs. nr
Match: gi|282165806|ref|NP_001164139.1| (C-type lectin precursor [Tribolium castaneum] >gi|270008086|gb|EFA04534.1| hypothetical protein TcasGA2_TC010419 [Tribolium castaneum]) HSP 1 Score: 266.544 bits (680), Expect = 6.136e-87 Identity = 120/200 (60.00%), Postives = 146/200 (73.00%), Query Frame = 0 Query: 58 KLALPNAKDCRDRILNAKFNGTR-----YFFSWEYAPTQDMNVTWFQGRNVCRRHCMDLVSLETAEESEFIKNQLIQSSIRYIWTSGRKCNFDGCERQDLQPTIINGWFWSGSGIRLGPTDNTLDGDWGRKGGDGQAQPDNRELRVTGKNDEACLAVLNNFYGDGVVWHDIACYHKKPFVCEDNPKLLKFIEDSNPGIRL 252 +LALP+ + C R+ +A + R YFFSWE+ PT+ + V W RN+CRRHCMD VSLET +E+EFIK +L++ ++RYIWTSGRKCNF GCER DLQP INGWFWSGSG ++GPT GDW GG GQ QPDNRE NDE+CL++LNNFY DGV WHD+ACYH KPFVCED+ +LL F+ NPGIRL Sbjct: 20 RLALPDPRSCASRVRHATYRDARGVTHSYFFSWEHPPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFIKQRLVRGNVRYIWTSGRKCNFAGCERADLQPPNINGWFWSGSGAKIGPTTQRNSGDWSHTGGYGQPQPDNRE--AAQGNDESCLSILNNFYNDGVKWHDVACYHVKPFVCEDSEELLNFVASRNPGIRL 217
BLAST of L-selectin vs. nr
Match: gi|665796266|ref|XP_008545914.1| (PREDICTED: uncharacterized protein LOC103570087 isoform X2 [Microplitis demolitor]) HSP 1 Score: 265.388 bits (677), Expect = 2.086e-86 Identity = 121/210 (57.62%), Postives = 152/210 (72.38%), Query Frame = 0 Query: 48 LTGVQAQDEGKLALPNAKDCRDRILNAKFNGTR-----YFFSWEYAPTQDMNVTWFQGRNVCRRHCMDLVSLETAEESEFIKNQLIQSSIRYIWTSGRKCNFDGCERQDLQPTIINGWFWSGSGIRLGPTDNTLDGDWGRKGGDGQAQPDNRELRVTGKNDEACLAVLNNFYGDGVVWHDIACYHKKPFVCEDNPKLLKFIEDSNPGIRL 252 ++ V + +LALP+ + C +R+ +A + R YFFSWE+ PT+ + V W RN+CRRHCMD VSLET +E+EFIK ++ + +IRYIWTSGRKCNF+GC+R DLQP INGWFWSGSG ++GPT GDW GG GQAQPDNRE NDE+CLA+LNNFY DGV WHD+AC+H KPFVCED+ +LL F+ NPGIRL Sbjct: 10 ISVVAVTAQRRLALPDPRSCANRVRHASYRDARGVAHSYFFSWEHQPTRSLEVDWLDSRNICRRHCMDAVSLETPQENEFIKQRIARGNIRYIWTSGRKCNFNGCDRPDLQPQNINGWFWSGSGAKIGPTTQRNTGDWSNTGGYGQAQPDNRE--AAQGNDESCLAILNNFYNDGVKWHDVACHHLKPFVCEDSDELLNFVASRNPGIRL 217
BLAST of L-selectin vs. nr
Match: gi|572258008|ref|XP_006607393.1| (PREDICTED: L-selectin-like [Apis dorsata] >gi|1035589472|ref|XP_016921085.1| PREDICTED: L-selectin [Apis cerana]) HSP 1 Score: 265.003 bits (676), Expect = 2.228e-86 Identity = 119/210 (56.67%), Postives = 154/210 (73.33%), Query Frame = 0 Query: 48 LTGVQAQDEGKLALPNAKDCRDRILNAKFNGTR-----YFFSWEYAPTQDMNVTWFQGRNVCRRHCMDLVSLETAEESEFIKNQLIQSSIRYIWTSGRKCNFDGCERQDLQPTIINGWFWSGSGIRLGPTDNTLDGDWGRKGGDGQAQPDNRELRVTGKNDEACLAVLNNFYGDGVVWHDIACYHKKPFVCEDNPKLLKFIEDSNPGIRL 252 LT + + +LALP+ + C +R+ +A + R YFFSWE+ PT+++ V W RN+CRRHCMD VSLET +E+EFIK ++ + ++RYIWTSGRKCNF+GC+R DLQP INGWFWSGSG ++GPT GDW GG GQAQPDNRE NDE+CL++LNNFY DG+ WHD+AC+H+KPFVCED+ +LL F+ NPGIRL Sbjct: 10 LTIIVVNAQRRLALPDPRSCANRVRHATYRDARGVAHSYFFSWEHQPTRNLEVDWLDARNICRRHCMDAVSLETPQENEFIKQRIARGNVRYIWTSGRKCNFNGCDRPDLQPQNINGWFWSGSGAKIGPTTQRNTGDWSHTGGYGQAQPDNRE--AAQGNDESCLSILNNFYNDGIKWHDVACHHRKPFVCEDSDELLNFVLSRNPGIRL 217 The following BLAST results are available for this feature:
BLAST of L-selectin vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 12
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BLAST of L-selectin vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of L-selectin vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold85_size395806:48458..55993+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold85_size395806-snap-gene-1.16 ID=maker-scaffold85_size395806-snap-gene-1.16|Name=L-selectin|organism=Tigriopus kingsejongensis|type=gene|length=7536bp|location=Sequence derived from alignment at scaffold85_size395806:48458..55993+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'L-selectin' has the following synonyms
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