rho-related gtp-binding protein, maker-scaffold872_size86337-snap-gene-0.16 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000007171 (supercontig:LSalAtl2s:LSalAtl2s403:51534:52749:-1 gene:EMLSAG00000007171 transcript:EMLSAT00000007171 description:"maker-LSalAtl2s403-augustus-gene-0.3") HSP 1 Score: 160.999 bits (406), Expect = 1.695e-45 Identity = 141/426 (33.10%), Postives = 209/426 (49.06%), Query Frame = 0 Query: 52 EPGRPQHFCSLAVVGDPKVGKTTLINRVLSGTFSDQPIAGSTGRRPSSPHQ-PWQFNVAGKLVQYSIWDLSGTSHLDLLSQSDHLSPGQVFPETLGAIIGSVDVVLLCYNIADPDSLFSALNCWCPKLRRTLTTKEKSPTRQVPIILVGCQSDSRQERDFSTTSSSSSSSPGSTLPPRRPRRPLSFSRDDELDHPVPANQALKLSQQSGCSLYVETSARDCSRSALSAFEVAALVTLGQFNQHQLDDPQVGAPPIPPKSVKISPPVPPKPRRAVSQMALNKEN--IY---SPEPLKQKSVSRINIFPSSPKLSLKTAKSRSS--------------ASMLS-LSGQRTPKIPRKSS----KQERMITIKCQRLNSAKEYEEVEVEVPEPVYETLKFQNDPNAIRSDGAVSKSNKKNTFTAKIRSMF 452 E G + + +VGD +VGKT L+ R + F D G + +S + V+ + ++++IWD +G SH SP + I + DV LLCY I+D ++LFSA+N W P++R T PIILVGCQSD R +RD ++ + R+ R P+S ++QAL L QQ C +YVET+A+ SA SAFEVAAL +LG L P+ P PP +V+ K R + + N +N +Y S P+ KS S + S+ S KT S +S M S LSG +TPK RK+S K ER++T+KCQR+ + K +EEVE+EVP P+Y+T++ N+ +S +K + +KI+++F Sbjct: 7 ESGLIRDEVRVTLVGDSRVGKTALLQRYIHKKFVD-------GYKSTSFEKCSSSSTVSSRRIKFTIWDTAG-SH----------SPN----SSRSLAIRNADVFLLCYKISDSNTLFSAINHWTPEIRAVST---------APIILVGCQSDLRSDRDVLSSLA------------RQGRAPVS------------SDQALTLGQQIACRMYVETTAKHSFTSASSAFEVAALASLGI-----LKTPRSFTPS-PPSTVQ-------KKRLTLESLEGNSQNNDLYFHQSSTPVHFKSPSVGSSSRSASLSSSKTRISSASIPSCGSASSSSNLTCGMSSVLSGNKTPKASRKASSSANKPERVVTLKCQRMTADKTFEEVEIEVPAPIYDTIQLYNETGI-----HTPRSKEKKSIGSKIKNLF 359
BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000000863 (supercontig:LSalAtl2s:LSalAtl2s1149:7505:31613:1 gene:EMLSAG00000000863 transcript:EMLSAT00000000863 description:"maker-LSalAtl2s1149-augustus-gene-0.4") HSP 1 Score: 76.2554 bits (186), Expect = 2.203e-15 Identity = 68/223 (30.49%), Postives = 99/223 (44.39%), Query Frame = 0 Query: 61 SLAVVGDPKVGKTTLINRVLSGTFSDQPIAGSTGRRPSSPHQPWQFNVAGKLVQYSIWDLSGTSHLDLLSQSDHLSPGQVFPETLGAIIGSVDVVLLCYNIADPDSLFSALNCWCPKLRRTLTTKEKSPTRQVPIILVGCQSDSRQERDFSTTSSSSSSSPGSTLPPRRPRRPLSFSRDDELDHPVPANQALKLSQQSGCSLYVETSARDCSRSALSAFEVAA 283 ++ +VGD K+GK+ LINR+ FS + S + + NV GK +++++WD SG S D + +S VF LLC+ I+DP SL S + W +LRR P +VPIIL GCQ+D R + + +S S G + PV QAL + + YVETS+++ S FEV A Sbjct: 13 TVVLVGDTKIGKSALINRITKNAFSQEYTPTSFDKVAV------KRNVEGKWLEFALWDTSGCSAYDNV-RSLPYEEAHVF--------------LLCFKISDPASLSSVRHKWMKELRR------HRP--EVPIILCGCQADLRHD----PPTIASLSKMGRS--------------------PVAPEQALAVCCEIDAVSYVETSSKE-GDSFYEVFEVCA 181
BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000012355 (supercontig:LSalAtl2s:LSalAtl2s903:193189:193806:1 gene:EMLSAG00000012355 transcript:EMLSAT00000012355 description:"augustus_masked-LSalAtl2s903-processed-gene-1.2") HSP 1 Score: 52.373 bits (124), Expect = 3.879e-8 Identity = 54/204 (26.47%), Postives = 86/204 (42.16%), Query Frame = 0 Query: 65 VGDPKVGKTTLINRVLSGTFSDQPIAGSTGRRPSSPHQPWQFNVAGKLVQYSIWDLSGTSHLDLLSQSDHLSPGQVFPETLGAIIGSVDVVLLCYNIADPDSLFSALNCWCPKLRRTLTTKEKSPTRQVPIILVGCQSDSRQERDFSTTSSSSSSSPGSTLPPRRPRRPLSFSRDDELDHPVPANQALKLSQQSGCSLYVETSA 268 +GD VGKT+LI + ++ + + + V G + + + D G D L P V+P T DV +LC+++ P S + W P+L+ K +R+ P++LVG QSD R++ + TL L +R+ E PV N+A K++ GC YVE+SA Sbjct: 17 LGDGAVGKTSLIVAYTTDGYTSEYVPTAIDTYDVVVR------VDGVPLTFEMCDTPGQEDFD------DLRP-LVYPNT--------DVFILCFSVVSPTSFKNIKEKWIPELK-------KRSSRKTPVLLVGTQSDLREDVN--------------TL--------LELNRNYE--APVTENEAKKMASALGCKGYVESSA 168
BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Match: EMLSAG00000001832 (supercontig:LSalAtl2s:LSalAtl2s1315:101571:120466:-1 gene:EMLSAG00000001832 transcript:EMLSAT00000001832 description:"maker-LSalAtl2s1315-augustus-gene-1.4") HSP 1 Score: 50.447 bits (119), Expect = 1.171e-7 Identity = 55/192 (28.65%), Postives = 74/192 (38.54%), Query Frame = 0 Query: 114 QYSIWDLSGTSHLDLLSQSDHLSPGQVFPETLGAIIGSVDVVLLCYNIADPDSLFSALNCWCPKLRRTLTTKEKSPTRQVPIILVGCQSDSRQERDFSTTSSSSSSSPGSTLPPRRPRRPLSFSRDDELDHPVPANQALKLSQQSGCSLYVETSARDCSRSALSAFEVAALVTLGQFNQHQLDDPQ--VGAP 303 +SIWD SG D + + DV LLCY I+DP SL++ N W ++RR P VPIIL G S+ R + S T + S + S PV QAL + + Y+ETSA++ S E V L Q N L + + VG P Sbjct: 1 MFSIWDTSGFPSYDAIRSLSY---------------QEADVFLLCYKISDPASLYNVKNKWSAEVRR------HRP--DVPIILCGXHSELRHD---SVTMAQLSKTGRS---------------------PVTIEQALAICCEIXAVNYIETSAKENSND-----EHLRFVPLLQLNGFTLSNGRLPVGIP 140
BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|2507301|sp|P52198.2|RND2_HUMAN (RecName: Full=Rho-related GTP-binding protein RhoN; AltName: Full=Rho family GTPase 2; AltName: Full=Rho-related GTP-binding protein Rho7; AltName: Full=Rnd2; Flags: Precursor) HSP 1 Score: 60.4622 bits (145), Expect = 3.105e-9 Identity = 63/231 (27.27%), Postives = 103/231 (44.59%), Query Frame = 0 Query: 60 CSLAVVGDPKVGKTTLINRVLSGTFSDQPIAGSTGRRPSS-PHQPWQFNVAGKLVQYSIWDLSGTSHLDLLSQSDHLSPGQVFPETLGAIIGSVDVVLLCYNIADPDSLFSALNCWCPKLRRTLTTKEKSPTRQVPIILVGCQSDSRQERDFSTTSSSSSSSPGSTLPPRRPRRPLSFSRDDELDHPVPANQALKLSQQSGCSLYVETSARDCSRSALSAFEVAALVTLGQ 289 C + VVGD + GKT L+ F+ GS P+ + F + + ++ ++WD SG+S+ D++ P +P++ D VL+C++I+ P++L S L W + T+E P +V +LVGC+ D R + +TL +R + PV Q L++Q G YVE S+R RS F VA + +LG+ Sbjct: 8 CKIVVVGDAECGKTALLQ-----VFAKDAYPGSY--VPTVFENYTASFEIDKRRIELNMWDTSGSSYY------DNVRP-LAYPDS--------DAVLICFDISRPETLDSVLKKWQGE------TQEFCPNAKV--VLVGCKLDMRTDL--------------ATLRELSKQRLI----------PVTHEQGTVLAKQVGAVSYVECSSRSSERSVRDVFHVATVASLGR 184
BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|13633866|sp|Q9QYM5.1|RND2_MOUSE (RecName: Full=Rho-related GTP-binding protein RhoN; AltName: Full=Rho family GTPase 2; AltName: Full=Rho-related GTP-binding protein Rho7; AltName: Full=Rnd2; Flags: Precursor) HSP 1 Score: 60.4622 bits (145), Expect = 3.285e-9 Identity = 63/231 (27.27%), Postives = 103/231 (44.59%), Query Frame = 0 Query: 60 CSLAVVGDPKVGKTTLINRVLSGTFSDQPIAGSTGRRPSS-PHQPWQFNVAGKLVQYSIWDLSGTSHLDLLSQSDHLSPGQVFPETLGAIIGSVDVVLLCYNIADPDSLFSALNCWCPKLRRTLTTKEKSPTRQVPIILVGCQSDSRQERDFSTTSSSSSSSPGSTLPPRRPRRPLSFSRDDELDHPVPANQALKLSQQSGCSLYVETSARDCSRSALSAFEVAALVTLGQ 289 C + VVGD + GKT L+ F+ GS P+ + F + + ++ ++WD SG+S+ D++ P +P++ D VL+C++I+ P++L S L W + T+E P +V +LVGC+ D R + +TL +R + PV Q L++Q G YVE S+R RS F VA + +LG+ Sbjct: 8 CKIVVVGDAECGKTALLQ-----VFAKDAYPGSY--VPTVFENYTASFEIDKRRIELNMWDTSGSSYY------DNVRP-LAYPDS--------DAVLICFDISRPETLDSVLKKWQGE------TQEFCPNAKV--VLVGCKLDMRTDL--------------ATLRELSKQRLI----------PVTHEQGTVLAKQVGAVSYVECSSRSSERSVRDVFHVATVASLGR 184
BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|122086021|sp|Q54KM9.1|RB11B_DICDI (RecName: Full=Ras-related protein Rab-11B) HSP 1 Score: 59.3066 bits (142), Expect = 6.759e-9 Identity = 42/155 (27.10%), Postives = 74/155 (47.74%), Query Frame = 0 Query: 58 HFCSLAVVGDPKVGKTTLINRVLSGTFSDQPIAGSTGRRPSSPHQPWQFNVAGKLVQYSIWDLSGTSHLDLLSQSDHLSPGQVFPETLGAIIGSVDVVLLCYNIADPDSLFSALNCWCPKLRRTLTTKEKSPTRQVPIILVGCQSDSRQERDFST 212 + C + V+GD VGK+ L++R FS ++ + G S+ + KL++ +WD +G + +++S + +GA L+ YNIAD +S F+ L W K R ++ + I+LVG +SD ++ R+ ST Sbjct: 10 YLCKIVVIGDSGVGKSNLLSRYNKNEFSVGKLS-TIGVEFSTK----TLKIDNKLIKLQLWDTAGQEKYNSITES-------YYKGAIGA--------LIVYNIADRNS-FNNLEKWLKKFR-------ENAHQDYGIMLVGNKSDLKEYREVST 136
BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|59798898|sp|Q8BLR7.1|RND1_MOUSE (RecName: Full=Rho-related GTP-binding protein Rho6; AltName: Full=Rho family GTPase 1; AltName: Full=Rnd1; Flags: Precursor) HSP 1 Score: 58.9214 bits (141), Expect = 1.017e-8 Identity = 63/257 (24.51%), Postives = 99/257 (38.52%), Query Frame = 0 Query: 60 CSLAVVGDPKVGKTTLINRVLSGTFSDQPIAGSTGRRPSSPHQPWQFNVAGKLVQYSIWDLSGTSHLDL---LSQSDHLSPGQVFPETLGAIIGSVDVVLLCYNIADPDSLFSALNCWCPKLRRTLTTKEKSPTRQVPIILVGCQSDSRQERDFSTTSSSSSSSPGSTLPPRRPRRPLSFSRDDELDH----PVPANQALKLSQQSGCSLYVETSARDCSRSALSAFEVAALVTLGQFNQHQLDDPQVGAPPIPPKS 309 C L +VGD + GKT ++ + + + + + + V+ S+WD SG+ + D L SD D VLLC++I+ P+++ SAL W RT TR ++L+GC++D R D ST EL H P+ Q +++Q G +Y+E SA S S F A++V L + + P+PPKS Sbjct: 14 CKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTAC------LETEEQRVELSLWDTSGSPYYDNVRPLCYSDS------------------DAVLLCFDISRPETMDSALKKW-----RTEILDYCPSTR---VLLIGCKTDLRT--DLSTLM--------------------------ELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSETSIHSIFRTASMVCLNK------------SSPVPPKS 198
BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|3334315|sp|O42825.1|RHO1_CANAL (RecName: Full=GTP-binding protein RHO1; Flags: Precursor) HSP 1 Score: 56.9954 bits (136), Expect = 3.302e-8 Identity = 57/227 (25.11%), Postives = 97/227 (42.73%), Query Frame = 0 Query: 62 LAVVGDPKVGKTTLINRVLSGTFSDQPIAGSTGRRPSS-PHQPWQFNVAGKLVQYSIWDLSGTSHLDLLSQSDHLSPGQVFPETLGAIIGSVDVVLLCYNIADPDSLFSALNCWCPKLRRTLTTKEKSPTRQVPIILVGCQSDSRQERDFSTTSSSSSSSPGSTLPPRRPRRPLSFSRDDELDHPVPANQALKLSQQSGCSLYVETSARDCSRSALSAFEVAALVTL 287 L +VGD GKT L+ GTF + + P+ + V G+ V+ ++WD +G D L P +P++ +V+L+C+++ PDSL + L W ++ + VPIILVGC+SD R + P + R+ ++ PV ++ +++Q+ G + Y+E SA+ R FE A +L Sbjct: 12 LVIVGDGACGKTCLLIVFSKGTFPEVYV-------PTVFENYVADVEVDGRKVELALWDTAGQEDYD------RLRPLS-YPDS--------NVILICFSVDSPDSLDNVLEKWISEVLHF--------CQGVPIILVGCKSDLRDD-------------PHTIEALRQQQQ-----------QPVSTSEGQQVAQRIGAADYLECSAKT-GRGVREVFEAATRASL 183
BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|2500182|sp|Q92730.1|RND1_HUMAN (RecName: Full=Rho-related GTP-binding protein Rho6; AltName: Full=Rho family GTPase 1; AltName: Full=Rnd1; Flags: Precursor) HSP 1 Score: 56.225 bits (134), Expect = 8.199e-8 Identity = 56/234 (23.93%), Postives = 92/234 (39.32%), Query Frame = 0 Query: 60 CSLAVVGDPKVGKTTLINRVLSGTFSDQPIAGSTGRRPSSPHQPWQFNVAGKLVQYSIWDLSGTSHLDLLSQSDHLSPGQVFPETLGAIIGSVDVVLLCYNIADPDSLFSALNCWCPKLRRTLTTKEKSPTRQVPIILVGCQSDSRQERDFSTTSSSSSSSPGSTLPPRRPRRPLSFSRDDELDH----PVPANQALKLSQQSGCSLYVETSARDCSRSALSAFEVAALVTLGQ 289 C L +VGD + GKT ++ + + + + + + V+ S+WD SG+ + D V P D VLLC++I+ P+++ SAL W RT TR ++L+GC++D R D ST EL H P+ Q +++Q G +Y+E SA +S S F A+++ L + Sbjct: 14 CKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTAC------LETEEQRVELSLWDTSGSPYYD-----------NVRP----LCYSDSDAVLLCFDISRPETVDSALKKW-----RTEILDYCPSTR---VLLIGCKTDLRT--DLSTLM--------------------------ELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTASMLCLNK 190
BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|116244834|sp|Q2HJ68.1|RND1_BOVIN (RecName: Full=Rho-related GTP-binding protein Rho6; AltName: Full=Rho family GTPase 1; AltName: Full=Rnd1; Flags: Precursor) HSP 1 Score: 55.4546 bits (132), Expect = 1.459e-7 Identity = 58/236 (24.58%), Postives = 92/236 (38.98%), Query Frame = 0 Query: 60 CSLAVVGDPKVGKTTLINRVLSGTFSDQPIAGSTGRRPSSPHQPWQFNVAGKLVQYSIWDLSGTSHLDL---LSQSDHLSPGQVFPETLGAIIGSVDVVLLCYNIADPDSLFSALNCWCPKLRRTLTTKEKSPTRQVPIILVGCQSDSRQERDFSTTSSSSSSSPGSTLPPRRPRRPLSFSRDDELDH----PVPANQALKLSQQSGCSLYVETSARDCSRSALSAFEVAALVTLG 288 C L +VGD + GKT ++ + + + + + + V+ S+WD SG+ + D L SD D VLLC++I+ P+++ SAL W RT TR ++L+GC++D R D ST EL H P+ Q +++Q G +Y+E SA +S S F A++V L Sbjct: 14 CKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTAC------LETEEQRVELSLWDTSGSPYYDNVRPLCYSDS------------------DAVLLCFDISRPETVDSALKKW-----RTEILDYCPSTR---VLLIGCKTDLRT--DLSTLM--------------------------ELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTASMVCLN 189
BLAST of rho-related gtp-binding protein vs. SwissProt
Match: gi|13878687|sp|Q9GPR2.1|RACI_DICDI (RecName: Full=Rho-related protein racI; Flags: Precursor) HSP 1 Score: 52.7582 bits (125), Expect = 8.363e-7 Identity = 50/223 (22.42%), Postives = 93/223 (41.70%), Query Frame = 0 Query: 59 FCSLAVVGDPKVGKTTLINRVLSGTFSDQPIAGSTGRRPSSPHQP-WQFNVAGKLVQYSIWDLSGTSHLDLLSQSDHLSPGQVFPETLGAIIGSVDVVLLCYNIADPDSLFSALNCWCPKLRRTLTTKEKSPTRQVPIILVGCQSDSRQERDFSTTSSSSSSSPGSTLPPRRPRRPLSFSRDDELDHPVPANQALKLSQQSGCSLYVETSARDCSRSALSAFE 280 + L V+GD K GKTT++ +G+F TG PS ++ WD S L++ D+ P +P T +V++LC++I P S + W P++R + +P+ PIIL+G + D R++ + ++ +++ P+ Q L LS++ ++Y+E S+ C++ F+ Sbjct: 5 YIKLLVLGDSKTGKTTMMMTYSTGSFP-------TGYVPSHVDATSLDIEYNKQVCHVGFWDSSA------LAEFDNTRPS-TYPNT--------NVIILCFSIDSPTSFENVSKKWIPEIR------QYAPSIHTPIILLGTKCDLREDEN-----------------------TINLLKENNQMPPISYKQGLALSKEIKATMYLECSSL-CNQGVNEIFK 175
BLAST of rho-related gtp-binding protein vs. nr
Match: gi|1325311362|ref|XP_023337309.1| (ras-like GTP-binding protein rhoA [Eurytemora affinis]) HSP 1 Score: 136.346 bits (342), Expect = 1.281e-32 Identity = 124/408 (30.39%), Postives = 184/408 (45.10%), Query Frame = 0 Query: 57 QHFCSLAVVGDPKVGKTTLINRVLSGTFSDQPIAGSTGRRPSSPHQPWQFNVAGKLVQYSIWDLSGTSHLDLLSQSDHLSPGQVFPETLGAI-IGSVDVVLLCYNIADPDSLFSALNCWCPKLRRTLTTKEKSPTRQVPIILVGCQSDSRQERDFSTTSSSSSSSPGSTLPPRRPRRPLSFSRDDELDHPVPANQALKLSQQSGCSLYVETSARDCSRSALSAFEVAALVTLGQFNQHQLDDPQVGAPPIP-PKSVKISPPVPPKPRRAVSQMALNKENIYSPEPLKQKSVSRINIFPSSPKLSLKTAKSRSSASMLSLSGQRTPKIPRKSSKQ--------ERMITIKCQRLNSAKEYEEVEVEVPEPVYETLKFQNDPNAIRSDGAVSKSNKKNTFTAKIRSMFLK 454 +H C++ +VGD +VGK+ L ++ +G F AG + S V GK ++++I+D +G+ P T I DV LLCY I+DP +LF A+N W P+LR S PI+LVGCQ+D R +R+ + S SP V ++QA SQQ YVETS++ + S FE+AA ++L Q + P P PK + S P R + A + Y L + S+S S LS +RS+ LS R+P R++S E+MI IKCQRL K YEEVE+EVP P++ETL+ ND + S+ KK + +K++++F++ Sbjct: 7 RHDCTVVMVGDSRVGKSALASKFRTGKFD----AGYN--KTSFDTLTTSSVVQGKRIKFTIYDTAGSRG----------------PNTHREIAYREADVFLLCYKISDPTTLFGAINHWVPELR--------SHAPATPIVLVGCQTDLRSDRNTLNSLSKQGRSP------------------------VSSDQARSFSQQVDAVQYVETSSKTSPKGPESVFELAAQISLEQVKE-----------PYPLPKPISTSTPEHTLDREYSTDSAEHFWEQYQSPALPRSSLSFQRNASLSSSLSSSLNSTRST-----LSIPRSPVRNRRNSMSLRAKPNTAEKMIKIKCQRLTVDKIYEEVEIEVPAPIFETLQACNDTSN-------SEKKKKESLGSKLKNLFIR 337
BLAST of rho-related gtp-binding protein vs. nr
Match: gi|1325308011|ref|XP_023335623.1| (mitochondrial Rho GTPase 1-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 120.168 bits (300), Expect = 5.510e-26 Identity = 85/236 (36.02%), Postives = 112/236 (47.46%), Query Frame = 0 Query: 55 RPQHFCSLAVVGDPKVGKTTLINRVLSGTFSDQPIAGSTGRRPSSPHQPWQFNVAGKLVQYSIWDLSGTSHLDLLSQSDHLSPGQVFPETLGAIIGSVDVVLLCYNIADPDSLFSALNCWCPKLRRTLTTKEKSPTRQVPIILVGCQSDSRQERDFSTTSSSSSSSPGSTLPPRRPRRPLSFSRDDELDHPVPANQALKLSQQSGCSLYVETSARDCSRSALSAFEVAALVTLGQF 290 RP+ ++ +VGD +VGKT L+ R F Q A +T R S VA + V+Y+IWD SG+ + T DV +LCYNI+DP +LFSA+N W P+LR ++PT PIILVGCQSD R +R+ + SP V + QAL +SQQ +YVETSA+ R SA EVAAL +LGQ Sbjct: 11 RPEEV-TVVLVGDCRVGKTALVTRFCEDIFI-QNYAPTTFNRYISDSM-----VANRRVRYTIWDTSGSREGN---------------STRSLASREADVFMLCYNISDPSTLFSAINSWVPELR------SQAPT--TPIILVGCQSDLRTDRNVIQNLAKVGKSP------------------------VSSQQALSMSQQIQAVMYVETSAKTSIRGVASALEVAALTSLGQI 192 HSP 2 Score: 65.4698 bits (158), Expect = 1.014e-7 Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 0 Query: 377 RTPKIPRKS-----SKQERMITIKCQRLNSAKEYEEVEVEVPEPVYETLK--FQNDPNAIRSDGAVSKSNKKNTFTAKIRSMFLKT 455 +TPK RK+ +K E+MITIKCQRL + + YEEVE+EVP PVYET++ +N N R ++ +K KI+ +F KT Sbjct: 383 KTPKQNRKTPEKDKTKTEKMITIKCQRLTADRTYEEVEIEVPAPVYETMQNYTENGTNLSR------QTREKRGIGTKIKCLFSKT 462
BLAST of rho-related gtp-binding protein vs. nr
Match: gi|1316172529|ref|XP_023231724.1| (rho-related GTP-binding protein RhoE-like isoform X2 [Centruroides sculpturatus]) HSP 1 Score: 114.005 bits (284), Expect = 1.163e-25 Identity = 83/268 (30.97%), Postives = 123/268 (45.90%), Query Frame = 0 Query: 60 CSLAVVGDPKVGKTTLINRVLSGTFSDQPIAGSTGRRPSSPHQPWQFNVAGKLVQYSIWDLSGTSHLDL---LSQSDHLSPGQVFPETLGAIIGSVDVVLLCYNIADPDSLFSALNCWCPKLRRTLTTKEKSPTRQVPIILVGCQSDSRQERDFSTTSSSSSSSPGSTLPPRRPRRPLSFSRDDELDHPVPANQALKLSQQSGCSLYVETSARDCSRSALSAFEVAALVTLGQFNQHQLDDPQVGAPPIPPKSVKISPPVPPKPRRAV 324 C L +VGD + GKT LI R ++ F++ + TG + + V+ + +++WD SG S D LS D +VF LLC++I +SL + +N WCP++R + SP VPIIL GCQSD R +R+ SP V + QAL +S+Q G + YVETS++ CSRS AFEVAAL LG+ N++ + P + + + + + K R V Sbjct: 6 CKLVLVGDSQCGKTALIQRFITDNFTE--VYSPTGFERYTA----SYEVSDYRINFTLWDTSGASAYDTVRPLSYQD----AKVF--------------LLCFHICHSNSLDNTVNKWCPEVR------QHSP--NVPIILCGCQSDLRTDRETLCDLGKGKKSP------------------------VTSEQALAVSRQIGATTYVETSSKSCSRSVRDAFEVAALAALGKLNKNHVTRPYLKVNCMSK--IDLKDELREKARHCV 215
BLAST of rho-related gtp-binding protein vs. nr
Match: gi|1316172527|ref|XP_023231723.1| (rho-related GTP-binding protein RhoE-like isoform X1 [Centruroides sculpturatus]) HSP 1 Score: 112.079 bits (279), Expect = 7.838e-25 Identity = 81/268 (30.22%), Postives = 126/268 (47.01%), Query Frame = 0 Query: 60 CSLAVVGDPKVGKTTLINRVLSGTFSDQPIAGSTGRRPSSPHQPWQFNVAGKLVQYSIWDLSGTSHLDL---LSQSDHLSPGQVFPETLGAIIGSVDVVLLCYNIADPDSLFSALNCWCPKLRRTLTTKEKSPTRQVPIILVGCQSDSRQERDFSTTSSSSSSSPGSTLPPRRPRRPLSFSRDDELDHPVPANQALKLSQQSGCSLYVETSARDCSRSALSAFEVAALVTLGQFNQHQLDDPQVGAPPIPPKSVKISPPVPPKPRRAV 324 C L +VGD + GKT LI R ++ F++ + TG + + V+ + +++WD SG S D LS D +VF LLC++I +SL + +N WCP++R + SP VPIIL GCQSD R +R+ SP ++ +++ + AL +S+Q G + YVETS++ CSRS AFEVAAL LG+ N++ + P + + + + + K R V Sbjct: 6 CKLVLVGDSQCGKTALIQRFITDNFTE--VYSPTGFERYTA----SYEVSDYRINFTLWDTSGASAYDTVRPLSYQD----AKVF--------------LLCFHICHSNSLDNTVNKWCPEVR------QHSP--NVPIILCGCQSDLRTDRETLCDLGKGKKSPVTS---------------EQVGYEYIRILALAVSRQIGATTYVETSSKSCSRSVRDAFEVAALAALGKLNKNHVTRPYLKVNCMSK--IDLKDELREKARHCV 224
BLAST of rho-related gtp-binding protein vs. nr
Match: gi|913307750|ref|XP_013184374.1| (PREDICTED: rho-related GTP-binding protein RhoE-like isoform X3 [Amyelois transitella]) HSP 1 Score: 109.768 bits (273), Expect = 6.033e-24 Identity = 81/276 (29.35%), Postives = 122/276 (44.20%), Query Frame = 0 Query: 30 WSHLNGPKPYPLQSGQPTTEHVEPGRPQHFCSLAVVGDPKVGKTTLINRVLSGTFSDQPIAGSTGRRPSSPHQ-PWQFNVAGKLVQYSIWDLSGTSHLDL---LSQSDHLSPGQVFPETLGAIIGSVDVVLLCYNIADPDSLFSALNCWCPKLRRTLTTKEKSPTRQVPIILVGCQSDSRQERDFSTTSSSSSSSPGSTLPPRRPRRPLSFSRDDELDHPVPANQALKLSQQSGCSLYVETSARDCSRSALSAFEVAALVTLGQFNQHQLDDPQVG 301 WS G K +G PT E + +VGD + GKTTL+ R ++ TF D P+ + + VA V +S+WD SGT+ D L+ D + +LC+NIA+P++L SA W ++R + P++L GC++D R +++ T S + HPV + +AL +++Q G + YVETSAR S+ AFEVAAL LG+ N+ Q+ QVG Sbjct: 2 WS---GKKSETGTAGTPTAEEE--------IKIVLVGDTQCGKTTLVQRFVTDTFIDSYT-------PTGFEKYGYTSTVADYRVNFSVWDTSGTTAYDTVRPLAYQD------------------AKIFMLCFNIAEPETLHSAAAKWYTEVR--------THGGTAPVLLCGCKADLRHDKETLTMLSKLKA------------------------HPVTSEEALSVARQLGATTYVETSARVSSKGVKDAFEVAALAALGKLNKQQMKQQQVG 209
BLAST of rho-related gtp-binding protein vs. nr
Match: gi|1344765305|ref|XP_023951120.1| (GTP-binding protein rho1-like isoform X2 [Bicyclus anynana]) HSP 1 Score: 105.916 bits (263), Expect = 1.466e-22 Identity = 79/276 (28.62%), Postives = 124/276 (44.93%), Query Frame = 0 Query: 30 WSHLNGPKPYPLQSGQPTTEHVEPGRPQHFCSLAVVGDPKVGKTTLINRVLSGTFSDQPIAGSTGRRPSSPHQ-PWQFNVAGKLVQYSIWDLSGTSHLDL---LSQSDHLSPGQVFPETLGAIIGSVDVVLLCYNIADPDSLFSALNCWCPKLRRTLTTKEKSPTRQVPIILVGCQSDSRQERDFSTTSSSSSSSPGSTLPPRRPRRPLSFSRDDELDHPVPANQALKLSQQSGCSLYVETSARDCSRSALSAFEVAALVTLGQFNQHQLDDPQVG 301 WS G K +G PT E ++ + +VGD + GKT+L+ R +S TF + P+ + + VA V +S+WD SGT+ D L+ D + +LC+NIA+P++L ++ W ++R + P++L GC++D R +++ TL R HPV + +AL +++Q G + YVETSAR S+ AFEVAAL LG+ N+ Q+ QVG Sbjct: 2 WS---GKKCSEGGAGTPTEEEIK---------VVLVGDTQCGKTSLVQRFVSDTFLE-------AYTPTGFEKYGYTCTVADYRVNFSVWDTSGTTAYDTVRPLAYQD------------------AKIFMLCFNIAEPETLNNSAAKWYKEVR--------THGGSAPVLLCGCKADLRHDKE--------------TLTMLSKLRT----------HPVTSEEALSVARQLGATTYVETSARASSKGVKDAFEVAALAALGKLNKQQMKQQQVG 208
BLAST of rho-related gtp-binding protein vs. nr
Match: gi|1325308013|ref|XP_023335625.1| (uncharacterized protein LOC111706911 isoform X2 [Eurytemora affinis] >gi|1325308015|ref|XP_023335626.1| uncharacterized protein LOC111706911 isoform X2 [Eurytemora affinis]) HSP 1 Score: 107.842 bits (268), Expect = 7.149e-22 Identity = 68/183 (37.16%), Postives = 88/183 (48.09%), Query Frame = 0 Query: 108 VAGKLVQYSIWDLSGTSHLDLLSQSDHLSPGQVFPETLGAIIGSVDVVLLCYNIADPDSLFSALNCWCPKLRRTLTTKEKSPTRQVPIILVGCQSDSRQERDFSTTSSSSSSSPGSTLPPRRPRRPLSFSRDDELDHPVPANQALKLSQQSGCSLYVETSARDCSRSALSAFEVAALVTLGQF 290 VA + V+Y+IWD SG+ + T DV +LCYNI+DP +LFSA+N W P+LR ++PT PIILVGCQSD R +R+ + SP V + QAL +SQQ +YVETSA+ R SA EVAAL +LGQ Sbjct: 2 VANRRVRYTIWDTSGSREGN---------------STRSLASREADVFMLCYNISDPSTLFSAINSWVPELR------SQAPT--TPIILVGCQSDLRTDRNVIQNLAKVGKSP------------------------VSSQQALSMSQQIQAVMYVETSAKTSIRGVASALEVAALTSLGQI 137 HSP 2 Score: 65.4698 bits (158), Expect = 7.515e-8 Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 0 Query: 377 RTPKIPRKS-----SKQERMITIKCQRLNSAKEYEEVEVEVPEPVYETLK--FQNDPNAIRSDGAVSKSNKKNTFTAKIRSMFLKT 455 +TPK RK+ +K E+MITIKCQRL + + YEEVE+EVP PVYET++ +N N R ++ +K KI+ +F KT Sbjct: 328 KTPKQNRKTPEKDKTKTEKMITIKCQRLTADRTYEEVEIEVPAPVYETMQNYTENGTNLSR------QTREKRGIGTKIKCLFSKT 407
BLAST of rho-related gtp-binding protein vs. nr
Match: gi|1229714390|ref|XP_022119355.1| (GTP-binding protein rho1-like isoform X2 [Pieris rapae]) HSP 1 Score: 103.99 bits (258), Expect = 7.351e-22 Identity = 75/263 (28.52%), Postives = 119/263 (45.25%), Query Frame = 0 Query: 43 SGQPTTEHVEPGRPQHFCSLAVVGDPKVGKTTLINRVLSGTFSDQPIAGSTGRRPSSPHQ-PWQFNVAGKLVQYSIWDLSGTSHLDL---LSQSDHLSPGQVFPETLGAIIGSVDVVLLCYNIADPDSLFSALNCWCPKLRRTLTTKEKSPTRQVPIILVGCQSDSRQERDFSTTSSSSSSSPGSTLPPRRPRRPLSFSRDDELDHPVPANQALKLSQQSGCSLYVETSARDCSRSALSAFEVAALVTLGQFNQHQLDDPQVG 301 +G PT E ++ + +VGD + GKT+L+ R ++ F + P+ + + VA V +S+WD SGT+ D L+ D + +LC+NIA+P+SL +A W ++R + P++L GC++D R +++ TL R HPV + +AL +++Q G + YVETSAR S+ AFEVAAL LG+ N+ Q+ QVG Sbjct: 11 AGTPTEEEIK---------VVLVGDTQCGKTSLVQRFVTDNFVEAYT-------PTGFEKYGYTCTVADYRVNFSVWDTSGTTAYDTVRPLAYQD------------------AKIFMLCFNIAEPESLNNAAAKWYREVR--------THGGSAPVLLCGCKADLRHDKE--------------TLTMLSKLRT----------HPVTSEEALSVARQLGATTYVETSARASSKGVKDAFEVAALAALGKLNKQQIKQQQVG 207
BLAST of rho-related gtp-binding protein vs. nr
Match: gi|926609802|ref|XP_013785319.1| (ras-like GTP-binding protein rhoA isoform X1 [Limulus polyphemus]) HSP 1 Score: 102.064 bits (253), Expect = 2.421e-21 Identity = 75/240 (31.25%), Postives = 112/240 (46.67%), Query Frame = 0 Query: 60 CSLAVVGDPKVGKTTLINRVLSGTFSDQPIAGSTGRRPSSPHQPWQFNVAGKLVQYSIWDLSGTSHLDLLSQSDHLSPGQVFPETLGAIIGSVDVVLLCYNIADPDSLFSALNCWCPKLRRTLTTKEKSPTRQVPIILVGCQSDSRQERDFSTTSSSSSSSPGSTLPPRRPRRPLSFSRDDELDHPVPANQALKLSQQSGCSLYVETSARDCSRSALSAFEVAALVTLGQFNQHQLDDPQ 299 C + +VGD + GKT LINR + F + + TG + + V + Y++WD SG S + G V P V LLC++I DP+SL + W P++R+ +VP+IL GCQ D R + D T+ + D+L PV + QAL +S+Q G + YVET++R RS+ AFEVAAL LG+ N++ + P+ Sbjct: 6 CKVVLVGDSRCGKTALINRFTNDNFLE--VYTPTGFERYTA----MYKVGDCSINYTVWDTSGAS-----------AYGTVRPLAYK----DASVFLLCFSIVDPESLNNTAARWHPEIRQHCA--------EVPVILCGCQCDLRNDLDTVTSLAK-----------------------DKL-QPVTSEQALVVSRQIGATTYVETTSRQTGRSSCEAFEVAALAALGKLNKNHSNIPR 192
BLAST of rho-related gtp-binding protein vs. nr
Match: gi|943957374|ref|XP_014361469.1| (PREDICTED: GTP-binding protein RHO1-like [Papilio machaon] >gi|943957377|ref|XP_014361470.1| PREDICTED: GTP-binding protein RHO1-like [Papilio machaon] >gi|943957379|ref|XP_014361471.1| PREDICTED: GTP-binding protein RHO1-like [Papilio machaon] >gi|943957382|ref|XP_014361472.1| PREDICTED: GTP-binding protein RHO1-like [Papilio machaon] >gi|930672257|gb|KPJ12875.1| Rho-related GTP-binding protein RhoE [Papilio machaon]) HSP 1 Score: 100.908 bits (250), Expect = 1.192e-20 Identity = 81/271 (29.89%), Postives = 122/271 (45.02%), Query Frame = 0 Query: 41 LQSGQPTTEHVEPGRP--QHFCSLAVVGDPKVGKTTLINRVLSGTFSDQPIAGSTGRRPSSPHQ-PWQFNVAGKLVQYSIWDLSGTSHLDL---LSQSDHLSPGQVFPETLGAIIGSVDVVLLCYNIADPDSLFSALNCWCPKLRR----TLTTKEKSPTRQVPIILVGCQSDSRQERDFSTTSSSSSSSPGSTLPPRRPRRPLSFSRDDELDHPVPANQALKLSQQSGCSLYVETSARDCSRSALSAFEVAALVTLGQFNQHQLDDPQVG 301 + SG+ +E + G P Q L +VGD + GKT L+ R++S TF + P+ + + VA V +S+WD SGT+ D L+ D V +LC+NIA+PDSL +A W ++R T + P++L GC++D R +++ T L R R PV + +AL +++Q G + YVETS+R + AFEVAAL LG+ N+ Q QVG Sbjct: 1 MWSGKKGSEGGDAGTPPAQEEVKLVLVGDSQCGKTALVQRLVSDTFLEAYT-------PTGFEKYAYTCTVADCRVSFSVWDTSGTTAYDTVRPLAYQD------------------AKVFMLCFNIAEPDSLHNAAAKWYREVRTHGGCTPGAGGAAGAGGAPVLLCGCKADLRHDKETLTV-----------LSKLRTR-------------PVTSEEALAVARQLGATTYVETSSRASGKGVRDAFEVAALAALGKLNKQQ---KQVG 219 The following BLAST results are available for this feature:
BLAST of rho-related gtp-binding protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 4
BLAST of rho-related gtp-binding protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 8
BLAST of rho-related gtp-binding protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold872_size86337:69504..79976+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold872_size86337-snap-gene-0.16 ID=maker-scaffold872_size86337-snap-gene-0.16|Name=rho-related gtp-binding protein|organism=Tigriopus kingsejongensis|type=gene|length=10473bp|location=Sequence derived from alignment at scaffold872_size86337:69504..79976+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'rho-related gtp-binding protein' has the following synonyms
Add to Basket
|