voltage-dependent calcium channel subunit alpha-2 delta-1-like, maker-scaffold87_size395581-snap-gene-0.15 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of voltage-dependent calcium channel subunit alpha-2 delta-1-like vs. L. salmonis genes
Match: EMLSAG00000000738 (supercontig:LSalAtl2s:LSalAtl2s1118:23248:41219:-1 gene:EMLSAG00000000738 transcript:EMLSAT00000000738 description:"maker-LSalAtl2s1118-snap-gene-0.25") HSP 1 Score: 130.954 bits (328), Expect = 3.619e-36 Identity = 64/154 (41.56%), Postives = 95/154 (61.69%), Query Frame = 0 Query: 8 ESSMSVSEYSFRMPEGMHRCTTNTSYWSLNPELKSDDFHERISGDCK---ECSRDYHIYKLSQINALLIVSDPKCISCNVPSYKDKPIEVDPEALETCHLPKRFRKRPPKCFSRHEEEIPECSSAS----PLFFPFQLLKLSMALIPILVSVVL 154 E S +S+++ ++ EG+HRCTT TS W++NP LK +FH+R++ C+ EC RD H++KL IN L +VS+P+C CN P + P+E+ A E C LP R+RKR CF++ + E ECS S L+ L+ LS+ L PI + +L Sbjct: 930 EGSFGLSQFNHKVQEGIHRCTTKTSVWTINPNLKKSEFHDRMTSTCRSETECKRDLHMFKLKNINGLFVVSNPECAHCNAPPFPKGPVEI--MATENCLLPHRYRKRQSGCFAQSDMETSECSKGSINLPGLWKTLILMYLSL-LSPIFLRKLL 1080
BLAST of voltage-dependent calcium channel subunit alpha-2 delta-1-like vs. nr
Match: gi|1126200710|ref|XP_019633684.1| (PREDICTED: voltage-dependent calcium channel subunit alpha-2/delta-2-like [Branchiostoma belcheri]) HSP 1 Score: 63.1586 bits (152), Expect = 1.240e-8 Identity = 31/85 (36.47%), Postives = 47/85 (55.29%), Query Frame = 0 Query: 50 SGDCKECSRDYHIYKLSQINALLIVSDPKCISCNVPSYKDKPIEVDPEAL---ETCHLPKRFRKRPPKCFSRH-EEEIPECSSAS 130 S DC CSR + +L N LL+V+DP C SCN + P+ +P+ + CH+ R+R+ P KC+ H EE+ C +A+ Sbjct: 854 SDDCGNCSRKMTVRQLRYSNLLLVVADPVCDSCN-----NTPVIQEPQKTNNPDQCHVTPRYRRGPEKCYDHHPEEDASHCGAAA 933
BLAST of voltage-dependent calcium channel subunit alpha-2 delta-1-like vs. nr
Match: gi|1108888022|ref|XP_019122324.1| (PREDICTED: voltage-dependent calcium channel subunit alpha-2/delta-1-like [Larimichthys crocea]) HSP 1 Score: 62.7734 bits (151), Expect = 1.955e-8 Identity = 42/129 (32.56%), Postives = 63/129 (48.84%), Query Frame = 0 Query: 11 MSVSEYSFRMPEGMHR--CTT-NTSYWSLNPELKSDDFHERISGDCKECSRDYHIYKLSQINALLIVSD--PKCISCNV-PSYKDKPIEVDPEALETCHLPKRFRKRPPKCFSRHE-EEIPECSSASPL 132 + +E +PE M + CTT T Y+ +++ R + DC+ C+R YH KL + N + I++D P C SC+ P +D+ P E P R+RK P CF E E+ P+C S L Sbjct: 939 LDAAEMDDELPEAMRKEVCTTEQTQYY-----FETNQLTFRGNIDCENCTRMYHAEKLPKTNLVFIIADAKPTCSSCDTKPLIQDEQPSDGPNPCERAQNP-RYRKGPAACFDNTEHEQDPDCGGVSGL 1061
BLAST of voltage-dependent calcium channel subunit alpha-2 delta-1-like vs. nr
Match: gi|1308380531|ref|XP_023119102.1| (voltage-dependent calcium channel subunit alpha-2/delta-1-like isoform X2 [Amphiprion ocellaris]) HSP 1 Score: 62.3882 bits (150), Expect = 2.322e-8 Identity = 44/131 (33.59%), Postives = 63/131 (48.09%), Query Frame = 0 Query: 9 SSMSVSEYSFRMPEGMHR---CTTNTSYWSLNPELKSDDFHERISGDCKECSRDYHIYKLSQINALLIVSDPK--CISCNV-PSYKDKPIEVDPEALETCHLPKRFRKRPPKCFSRHE-EEIPECSSASPL 132 S M +E + + M + T T Y+ ++D+ R S DC+ CSR YH KL + N + I++D K C SC+ P +D+ P E P R+RK P CF +E EE P+C S L Sbjct: 927 SYMDAAEMDDEVSDAMRQEVCITEQTQYF-----FETDNLSFRGSVDCENCSRLYHAEKLPKTNLVFIITDAKGTCTSCDTKPLIQDEQQSNGPNPCEMALNP-RYRKGPAVCFDNNEHEEDPDCGGVSGL 1051
BLAST of voltage-dependent calcium channel subunit alpha-2 delta-1-like vs. nr
Match: gi|1308380537|ref|XP_023119117.1| (voltage-dependent calcium channel subunit alpha-2/delta-1-like isoform X4 [Amphiprion ocellaris]) HSP 1 Score: 62.3882 bits (150), Expect = 2.344e-8 Identity = 44/131 (33.59%), Postives = 63/131 (48.09%), Query Frame = 0 Query: 9 SSMSVSEYSFRMPEGMHR---CTTNTSYWSLNPELKSDDFHERISGDCKECSRDYHIYKLSQINALLIVSDPK--CISCNV-PSYKDKPIEVDPEALETCHLPKRFRKRPPKCFSRHE-EEIPECSSASPL 132 S M +E + + M + T T Y+ ++D+ R S DC+ CSR YH KL + N + I++D K C SC+ P +D+ P E P R+RK P CF +E EE P+C S L Sbjct: 924 SYMDAAEMDDEVSDAMRQEVCITEQTQYF-----FETDNLSFRGSVDCENCSRLYHAEKLPKTNLVFIITDAKGTCTSCDTKPLIQDEQQSNGPNPCEMALNP-RYRKGPAVCFDNNEHEEDPDCGGVSGL 1048
BLAST of voltage-dependent calcium channel subunit alpha-2 delta-1-like vs. nr
Match: gi|1308380528|ref|XP_023119094.1| (voltage-dependent calcium channel subunit alpha-2/delta-1-like isoform X1 [Amphiprion ocellaris]) HSP 1 Score: 62.3882 bits (150), Expect = 2.368e-8 Identity = 44/131 (33.59%), Postives = 63/131 (48.09%), Query Frame = 0 Query: 9 SSMSVSEYSFRMPEGMHR---CTTNTSYWSLNPELKSDDFHERISGDCKECSRDYHIYKLSQINALLIVSDPK--CISCNV-PSYKDKPIEVDPEALETCHLPKRFRKRPPKCFSRHE-EEIPECSSASPL 132 S M +E + + M + T T Y+ ++D+ R S DC+ CSR YH KL + N + I++D K C SC+ P +D+ P E P R+RK P CF +E EE P+C S L Sbjct: 930 SYMDAAEMDDEVSDAMRQEVCITEQTQYF-----FETDNLSFRGSVDCENCSRLYHAEKLPKTNLVFIITDAKGTCTSCDTKPLIQDEQQSNGPNPCEMALNP-RYRKGPAVCFDNNEHEEDPDCGGVSGL 1054
BLAST of voltage-dependent calcium channel subunit alpha-2 delta-1-like vs. nr
Match: gi|1308380534|ref|XP_023119110.1| (voltage-dependent calcium channel subunit alpha-2/delta-1-like isoform X3 [Amphiprion ocellaris]) HSP 1 Score: 62.3882 bits (150), Expect = 2.413e-8 Identity = 44/131 (33.59%), Postives = 63/131 (48.09%), Query Frame = 0 Query: 9 SSMSVSEYSFRMPEGMHR---CTTNTSYWSLNPELKSDDFHERISGDCKECSRDYHIYKLSQINALLIVSDPK--CISCNV-PSYKDKPIEVDPEALETCHLPKRFRKRPPKCFSRHE-EEIPECSSASPL 132 S M +E + + M + T T Y+ ++D+ R S DC+ CSR YH KL + N + I++D K C SC+ P +D+ P E P R+RK P CF +E EE P+C S L Sbjct: 924 SYMDAAEMDDEVSDAMRQEVCITEQTQYF-----FETDNLSFRGSVDCENCSRLYHAEKLPKTNLVFIITDAKGTCTSCDTKPLIQDEQQSNGPNPCEMALNP-RYRKGPAVCFDNNEHEEDPDCGGVSGL 1048
BLAST of voltage-dependent calcium channel subunit alpha-2 delta-1-like vs. nr
Match: gi|1228964991|ref|XP_022045850.1| (voltage-dependent calcium channel subunit alpha-2/delta-1-like [Acanthochromis polyacanthus]) HSP 1 Score: 62.003 bits (149), Expect = 2.791e-8 Identity = 40/109 (36.70%), Postives = 55/109 (50.46%), Query Frame = 0 Query: 28 TTNTSYWSLNPELKSDDFHERISGDCKECSRDYHIYKLSQINALLIVSDPK--CISCNV-PSYKDKPIEVDPEALETCHLPKRFRKRPPKCFSRHE-EEIPECSSASPL 132 T T Y+ ++D+ R S DC+ CSR YH KL + N + I++D K C SC+ P +D+ P E P R+RK P CF +E EE P+C S L Sbjct: 709 TEQTQYF-----FETDNLSFRGSVDCENCSRLYHAEKLPKTNLVFIITDAKGTCTSCDTKPLIQDEQQSNGPNPCEMALNP-RYRKGPAVCFDNNEHEEDPDCGGVSGL 811
BLAST of voltage-dependent calcium channel subunit alpha-2 delta-1-like vs. nr
Match: gi|1079803039|ref|XP_018526509.1| (PREDICTED: LOW QUALITY PROTEIN: voltage-dependent calcium channel subunit alpha-2/delta-1-like [Lates calcarifer]) HSP 1 Score: 60.077 bits (144), Expect = 1.361e-7 Identity = 43/128 (33.59%), Postives = 65/128 (50.78%), Query Frame = 0 Query: 28 TTNTSYWSLNPELKSDDFHERISGDCKECSRDYHIYKLSQINALLIVSDPK--CISCNVPSYKDKPIEVDPEALETCHLPK--RFRKRPPKCFSRHE-EEIPECSSASPLFFPFQLLKLSMALIPILV 150 T T Y+ +N L R + DC+ CSR YH KL + N + I++D K C+ C+ K + E E + C L K R+RK P +CF +E E+ +C AS L P L +++ L+ + V Sbjct: 955 TKQTQYYFMNNNLSF-----RGTIDCENCSRLYHAEKLPKTNLVFIITDAKLTCLPCDATLLKQE--EEQSEGPDPCELAKKPRYRKGPSECFDNNEHEDDADCGGASSL-SPSLWLMVALQLVLLWV 1074
BLAST of voltage-dependent calcium channel subunit alpha-2 delta-1-like vs. nr
Match: gi|1168995838|ref|XP_020455167.1| (voltage-dependent calcium channel subunit alpha-2/delta-1-like isoform X2 [Monopterus albus]) HSP 1 Score: 59.6918 bits (143), Expect = 2.419e-7 Identity = 41/131 (31.30%), Postives = 63/131 (48.09%), Query Frame = 0 Query: 9 SSMSVSEYSFRMPEGMHR---CTTNTSYWSLNPELKSDDFHERISGDCKECSRDYHIYKLSQINALLIVSDPK--CISCNVPSYKDKPIEVD-PEALETCHLPKRFRKRPPKCFSRHE-EEIPECSSASPL 132 S + ++ +P+ M + T T ++ +N L + S DC+ CSR +H KL + N + I++D K C SC+ K + D P+ E P R+RK P CF +E EE P+C S L Sbjct: 929 SFLDAADMDDEVPDAMLKEVCITEQTQFYFMNNNLSV-----KGSVDCENCSRLFHAEKLPKTNLVFIIADAKLTCSSCDAKELKQEEEPSDGPDPCEMAQSP-RYRKGPGTCFDNNEHEEDPDCGGTSSL 1053
BLAST of voltage-dependent calcium channel subunit alpha-2 delta-1-like vs. nr
Match: gi|1168995844|ref|XP_020455170.1| (voltage-dependent calcium channel subunit alpha-2/delta-1-like isoform X5 [Monopterus albus]) HSP 1 Score: 59.3066 bits (142), Expect = 2.441e-7 Identity = 41/131 (31.30%), Postives = 63/131 (48.09%), Query Frame = 0 Query: 9 SSMSVSEYSFRMPEGMHR---CTTNTSYWSLNPELKSDDFHERISGDCKECSRDYHIYKLSQINALLIVSDPK--CISCNVPSYKDKPIEVD-PEALETCHLPKRFRKRPPKCFSRHE-EEIPECSSASPL 132 S + ++ +P+ M + T T ++ +N L + S DC+ CSR +H KL + N + I++D K C SC+ K + D P+ E P R+RK P CF +E EE P+C S L Sbjct: 923 SFLDAADMDDEVPDAMLKEVCITEQTQFYFMNNNLSV-----KGSVDCENCSRLFHAEKLPKTNLVFIIADAKLTCSSCDAKELKQEEEPSDGPDPCEMAQSP-RYRKGPGTCFDNNEHEEDPDCGGTSSL 1047 The following BLAST results are available for this feature:
BLAST of voltage-dependent calcium channel subunit alpha-2 delta-1-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of voltage-dependent calcium channel subunit alpha-2 delta-1-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of voltage-dependent calcium channel subunit alpha-2 delta-1-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold87_size395581:26215..26837- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold87_size395581-snap-gene-0.15 ID=maker-scaffold87_size395581-snap-gene-0.15|Name=voltage-dependent calcium channel subunit alpha-2 delta-1-like|organism=Tigriopus kingsejongensis|type=gene|length=623bp|location=Sequence derived from alignment at scaffold87_size395581:26215..26837- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'voltage-dependent calcium channel subunit alpha-2 delta-1-like' has the following synonyms
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