unnamed protein product, maker-scaffold916_size81488-snap-gene-0.6 (gene) Tigriopus kingsejongensis

Overview


Name	unnamed protein product
Unique Name	maker-scaffold916_size81488-snap-gene-0.6
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

[Close]

BLAST of unnamed protein product vs. L. salmonis genes
Match: EMLSAG00000008220 (supercontig:LSalAtl2s:LSalAtl2s495:89801:92529:1 gene:EMLSAG00000008220 transcript:EMLSAT00000008220 description:"snap_masked-LSalAtl2s495-processed-gene-1.13")

HSP 1 Score: 210.69 bits (535), Expect = 2.536e-65
Identity = 103/182 (56.59%), Postives = 126/182 (69.23%), Query Frame = 0

Query:   74 LVSFSGKDYMGMQRNTGFATIEEELMKAFLAGGAIPQDWYDCMQKSFFQRASRTDKGVSALKMIVSLKMLYDQEII--------------------SKINATLPPEIRLQDIKRVTKNFNSKSSCDARTYLYLMPTFAVCPIEEILSEEYRIDAETRKRTNEVLQLLVGSHYYHNYTAGKAP 235
            ++SFSGK Y+GMQRN G +T+EEEL+KA    GAIP +WYD   KSFFQRASRTDKGVSA KM+VSLKM    +II                     KINA LP +IR+QD+KRVTKNFNSK+SCDARTYLY++PT A  PI+ I  E Y I ++ + + N  L+L  GSHY+HNYT+GK P
Sbjct:    2 MLSFSGKKYLGMQRNQGCSTVEEELLKALRDSGAIPPEWYDNASKSFFQRASRTDKGVSAAKMVVSLKMCKLSQIIYFFTLILNNIINTINEDGTRDKINAKLPSDIRVQDVKRVTKNFNSKNSCDARTYLYMLPTLAFAPIDSISDESYHITSDVKIKVNATLKLFEGSHYFHNYTSGKLP 183

HSP 2 Score: 122.865 bits (307), Expect = 4.004e-32
Identity = 53/106 (50.00%), Postives = 77/106 (72.64%), Query Frame = 0

Query:  233 KAPGLGLMLDEVHYDRYNKRFGSDGVHDALSWDHLSDQLESFKRDIIFEDIILSEKKEKSMLEWMKNLPIHTFTPRHFESMTPEQSPLAKAYRNISRDKKNADGEE 338
            +APGLGL+L+EVHY+RYN +FG DG+HD L W+ + D++E FK D IF +I+ +E++EKSM+ WM NL +H F PRHFE    + +P+ KA   +  DKK ++ +E
Sbjct:  256 RAPGLGLLLEEVHYERYNYKFGKDGLHDDLKWESVKDEVEKFKEDFIFSEIVDTEREEKSMITWMGNLLLHKFEPRHFEKDMKQFTPIEKAKALLKYDKKESNEKE 361

[Close]

BLAST of unnamed protein product vs. L. salmonis genes
Match: EMLSAG00000000437 (supercontig:LSalAtl2s:LSalAtl2s1068:424499:425749:-1 gene:EMLSAG00000000437 transcript:EMLSAT00000000437 description:"maker-LSalAtl2s1068-snap-gene-3.26")

HSP 1 Score: 53.1434 bits (126), Expect = 5.330e-8
Identity = 46/189 (24.34%), Postives = 76/189 (40.21%), Query Frame = 0

Query:   67 RAKKVACLVSFSGKDYMGMQ-RNTGFATIEEELMKAFLAGGAIPQDWYDCMQKSFFQRASRTDKGVSALKMIVSL------------------------KMLYDQEIISKINATLPPEIRLQD-IKRVTKNFNSKSSCDARTYLYLMPTFAVCPIEEILSEEYRIDAETRKRTNEVLQLLVGSHYYHNY 229
            + +KV   +++ G +Y G   +     TIE  L KA L    I        + S + R  RTDKGV A + ++S+                         M ++ + I  IN+ LPP+I+L        +  +++  C  RTY Y  P  ++               ++  + NE    LVGSH + N+
Sbjct:   32 KKRKVLFQITYFGWNYHGFTTQEDSCMTIEAHLFKALLTTCLIQS-----RETSNYHRCGRTDKGVXAFRQVISIDVRTNLKEGIGVFDYPDCKADSRPDMPHEIDYIKIINSNLPPDIQLIAWTPAQNRELSARFDCKKRTYKYFFPLGSI---------------KSLSKMNEAGAKLVGSHDFRNF 200

[Close]

BLAST of unnamed protein product vs. SwissProt
Match: gi|182676393|sp|Q4KM92.2|TRUA_RAT (RecName: Full=tRNA pseudouridine synthase A; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; Flags: Precursor)

HSP 1 Score: 167.162 bits (422), Expect = 1.317e-46
Identity = 91/214 (42.52%), Postives = 127/214 (59.35%), Query Frame = 0

Query:   44 PPVVPAEAPDLGANGA----KAEWPWKRAK--------------KVACLVSFSGKDYMGMQRNTG---FATIEEELMKAFLAGGAIPQDWYDCMQKSFFQRASRTDKGVSALKMIVSLKMLYDQEIISKINATLPPEIRLQDIKRVTKNFNSKSSCDARTYLYLMPTFAVCPIE-EILSEEYRIDAETRKRTNEVLQLLVGSHYYHNYTAGKAP 235
            PP +P+  PD    G     + E P KR K              K+  L+++SGK Y GMQRN G   F TIE++L+ A +  G IP++    M+K  FQR +RTDKGVSA   +VSLK+    +I+ KIN+ LP  IR+  +KRVT  FNSK+ CDARTY Y++PTFA    + ++  E YR+ AET ++ N +L    G+H +HN+T+ K P
Sbjct:   37 PPALPSHQPDRKGRGGWVWEETEHPAKRVKGGEDEEPPRKLPKRKIVLLMAYSGKGYHGMQRNLGSSQFRTIEDDLVSALVQAGCIPENHGTDMRKMSFQRCARTDKGVSAAGQVVSLKVWLIDDILDKINSHLPSHIRILGLKRVTGGFNSKNKCDARTYCYMLPTFAFAHKDRDVQDESYRLSAETLQQVNRLLGCYKGTHNFHNFTSQKGP 250

HSP 2 Score: 89.7373 bits (221), Expect = 1.457e-18
Identity = 35/74 (47.30%), Postives = 54/74 (72.97%), Query Frame = 0

Query:  233 KAPGLGLMLDEVHYDRYNKRFGSDGVHDALSWDHLSDQLESFKRDIIFEDIILSEKKEKSMLEWMKNLPIHTFT 306
            KAPGLGL+L+ VH+++YN+RFGSDG+H+ L W     ++ +FK   I+  I+ +E+ E+SM +W+  LPIH F+
Sbjct:  323 KAPGLGLVLERVHFEKYNQRFGSDGLHEPLDWAQEEGKVTAFKEQYIYPTIVSTERDERSMAQWLNTLPIHNFS 396

[Close]

BLAST of unnamed protein product vs. SwissProt
Match: gi|114152895|sp|Q9Y606.3|TRUA_HUMAN (RecName: Full=tRNA pseudouridine synthase A; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; Flags: Precursor)

HSP 1 Score: 165.622 bits (418), Expect = 4.560e-46
Identity = 88/192 (45.83%), Postives = 124/192 (64.58%), Query Frame = 0

Query:   48 PAEAPDLGANGAKAEWPWKRAKKVACLVSFSGKDYMGMQRNTG---FATIEEELMKAFLAGGAIPQDWYDCMQKSFFQRASRTDKGVSALKMIVSLKMLYDQEIISKINATLPPEIRLQDIKRVTKNFNSKSSCDARTYLYLMPTFAVCPIE-EILSEEYRIDAETRKRTNEVLQLLVGSHYYHNYTAGKAP 235
            PA+    G +  + E P KR  K+  L+++SGK Y GMQRN G   F TIE++L+ A +  G IP++  + M+K  FQR +RTDKGVSA   +VSLK+    +I+ KIN+ LP  IR+  +KRVT  FNSK+ CDARTY YL+PTFA    + ++  E YR+ AET ++ N +L    G+H +HN+T+ K P
Sbjct:   65 PAKKLKSGGDEERREKPPKR--KIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHGEDMRKMSFQRCARTDKGVSAAGQVVSLKVWLIDDILEKINSHLPSHIRILGLKRVTGGFNSKNRCDARTYCYLLPTFAFAHKDRDVQDETYRLSAETLQQVNRLLACYKGTHNFHNFTSQKGP 254

HSP 2 Score: 89.3521 bits (220), Expect = 2.217e-18
Identity = 35/74 (47.30%), Postives = 55/74 (74.32%), Query Frame = 0

Query:  233 KAPGLGLMLDEVHYDRYNKRFGSDGVHDALSWDHLSDQLESFKRDIIFEDIILSEKKEKSMLEWMKNLPIHTFT 306
            KAPGLGL+L+ VH+++YN+RFG+DG+H+ L W     ++ +FK + I+  II +E+ E+SM +W+  LPIH F+
Sbjct:  327 KAPGLGLVLERVHFEKYNQRFGNDGLHEPLDWAQEEGKVAAFKEEHIYPTIIGTERDERSMAQWLSTLPIHNFS 400

[Close]

BLAST of unnamed protein product vs. SwissProt
Match: gi|114152896|sp|Q9WU56.2|TRUA_MOUSE (RecName: Full=tRNA pseudouridine synthase A; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; Flags: Precursor)

HSP 1 Score: 164.081 bits (414), Expect = 1.794e-45
Identity = 90/214 (42.06%), Postives = 126/214 (58.88%), Query Frame = 0

Query:   44 PPVVPAEAPDLGANGA----KAEWPWKRAK--------------KVACLVSFSGKDYMGMQRNTG---FATIEEELMKAFLAGGAIPQDWYDCMQKSFFQRASRTDKGVSALKMIVSLKMLYDQEIISKINATLPPEIRLQDIKRVTKNFNSKSSCDARTYLYLMPTFAVCPIE-EILSEEYRIDAETRKRTNEVLQLLVGSHYYHNYTAGKAP 235
            PP + +  PD    G     + E P KR K              K+  L+++SGK Y GMQRN G   F TIE++L+ A +  G IP++    M+K  FQR +RTDKGVSA   +VSLK+    +I+ KIN+ LP  IR+  +KRVT  FNSK+ CDARTY Y++PTFA    + ++  E YR+ AET ++ N +L    G+H +HN+T+ K P
Sbjct:   37 PPALASHQPDRKGRGGWVWEETEHPAKRVKGGEDEEPPRKLPKRKIVLLMAYSGKGYHGMQRNLGSSQFRTIEDDLVSALVQAGCIPENHGTDMRKMSFQRCARTDKGVSAAGQVVSLKVWLIDDILDKINSHLPSHIRILGLKRVTGGFNSKNKCDARTYCYMLPTFAFAHKDRDVQDESYRLSAETLQQVNRLLACYKGTHNFHNFTSQKGP 250

HSP 2 Score: 88.5817 bits (218), Expect = 3.068e-18
Identity = 34/74 (45.95%), Postives = 53/74 (71.62%), Query Frame = 0

Query:  233 KAPGLGLMLDEVHYDRYNKRFGSDGVHDALSWDHLSDQLESFKRDIIFEDIILSEKKEKSMLEWMKNLPIHTFT 306
            KAPGLGL+L+ VH+++YN+RFG DG+H+ L W     ++ +FK   I+  I+ +E+ E+SM +W+  LPIH F+
Sbjct:  323 KAPGLGLVLERVHFEKYNQRFGGDGLHEPLDWTQEEGKVTAFKEQYIYPTIVSTERDERSMAQWLNTLPIHNFS 396

[Close]

BLAST of unnamed protein product vs. SwissProt
Match: gi|74627010|sp|O94396.1|PUS1_SCHPO (RecName: Full=tRNA pseudouridine synthase 1; AltName: Full=tRNA pseudouridylate synthase 1; AltName: Full=tRNA-uridine isomerase 1)

HSP 1 Score: 114.39 bits (285), Expect = 8.776e-27
Identity = 57/130 (43.85%), Postives = 81/130 (62.31%), Query Frame = 0

Query:   66 KRAKKVACLVSFSGKDYMGMQRNTGFATIEEELMKAFLAGGAIPQDWYDCMQKSFFQRASRTDKGVSALKMIVSLKMLY-DQEIISKINATLPPEIRLQDIKRVTKNFNSKSSCDARTYLYLMPTFAVCP 194
            K  +KVACLV + G  Y GMQ N    TIE +L  AF+  GA+     D  +K    RA+RTDKGV A   ++SLK++  D+++I K+N  LPP IRL D+ R   +FN ++ C++R Y Y++PT+A  P
Sbjct:   41 KPKRKVACLVGYCGSGYHGMQLNPPSKTIEGDLFDAFVKAGAVSSYNADDPKKVALARAARTDKGVHAAGNVISLKLIMEDEKLIEKVNEHLPPSIRLWDVIRTINSFNPRTYCESRIYEYMVPTYAFVP 170

[Close]

BLAST of unnamed protein product vs. SwissProt
Match: gi|74635069|sp|Q6CC39.1|PUS1_YARLI (RecName: Full=tRNA pseudouridine synthase 1; AltName: Full=tRNA pseudouridylate synthase 1; AltName: Full=tRNA-uridine isomerase 1)

HSP 1 Score: 113.62 bits (283), Expect = 1.614e-26
Identity = 55/124 (44.35%), Postives = 80/124 (64.52%), Query Frame = 0

Query:   69 KKVACLVSFSGKDYMGMQRNTGFATIEEELMKAFLAGGAIPQDWYDCMQKSFFQRASRTDKGVSALKMIVSLKMLY-DQEIISKINATLPPEIRLQDIKRVTKNFNSKSSCDARTYLYLMPTFA 191
            +KVAC++ + G  Y GMQ N    TIE ++ +AF+  GAI Q+  D  +KS F RA+RTDKGV A   ++SLKM+  D+ I+ KIN+ LP ++R+  + R  K F  +  C +R Y YLMPT++
Sbjct:   85 RKVACMIGYCGTGYHGMQLNPPQKTIEGDIFQAFVKAGAISQNNADDPKKSAFMRAARTDKGVHAAGNVISLKMIIEDENIVEKINSHLPEQLRVWGVSRTNKAFECRKLCSSRVYEYLMPTYS 208

[Close]

BLAST of unnamed protein product vs. SwissProt
Match: gi|74637780|sp|Q6FV05.1|PUS1_CANGA (RecName: Full=tRNA pseudouridine synthase 1; AltName: Full=tRNA pseudouridylate synthase 1; AltName: Full=tRNA-uridine isomerase 1 [[Candida] glabrata CBS 138])

HSP 1 Score: 112.079 bits (279), Expect = 5.707e-26
Identity = 58/126 (46.03%), Postives = 82/126 (65.08%), Query Frame = 0

Query:   69 KKVACLVSFSGKDYMGMQRNTGFATIEEELMKAFLAGGAIPQDWYDCMQKSFFQRASRTDKGVSALKMIVSLKMLY-DQEIISKINATLPPEIRLQDIKRVTKNFNSKSSCDARTYLYLMPTFAVC 193
            +KVA ++ + G  Y GMQ N    TIE  L KAF+  GAI +   + ++K+ F RA+RTDKGV A   ++SLKM+  D EI+ KINA LP  IR+ DI+RV K F+ +  C +R Y YL+PT+++ 
Sbjct:   87 RKVAVMIGYCGTGYHGMQYNPPNPTIEAALFKAFVDAGAISKANSNDLKKNNFMRAARTDKGVHAGGNLISLKMIIEDPEIMDKINANLPEGIRIWDIERVNKAFDCRKMCSSRWYEYLLPTYSLI 212

[Close]

BLAST of unnamed protein product vs. SwissProt
Match: gi|3122655|sp|Q12211.1|PUS1_YEAST (RecName: Full=tRNA pseudouridine synthase 1; AltName: Full=tRNA pseudouridylate synthase 1; AltName: Full=tRNA-uridine isomerase 1)

HSP 1 Score: 112.079 bits (279), Expect = 6.939e-26
Identity = 64/148 (43.24%), Postives = 88/148 (59.46%), Query Frame = 0

Query:   48 PAEAPDLGANGAK-AEWPWKRAKKVACLVSFSGKDYMGMQRNTGFATIEEELMKAFLAGGAIPQDWYDCMQKSFFQRASRTDKGVSALKMIVSLKMLY-DQEIISKINATLPPEIRLQDIKRVTKNFNSKSSCDARTYLYLMPTFAVC 193
            P   P L  NG    + P    +KVA +V + G  Y GMQ N    TIE  L KAF+  GAI +D  + ++K+ F RA+RTDKGV A   ++SLKM+  D +I  KIN  LP  IR+ DI+RV K F+ +  C +R Y YL+PT+++ 
Sbjct:   53 PKSGPRLDENGNPLPKEPRLPKRKVAVMVGYCGTGYHGMQYNPPNPTIESALFKAFVEAGAISKDNSNDLKKNGFMRAARTDKGVHAGGNLISLKMIIEDPDIKQKINEKLPEGIRVWDIERVNKAFDCRKMCSSRWYEYLLPTYSLI 200

[Close]

BLAST of unnamed protein product vs. SwissProt
Match: gi|1160421878|sp|Q59S63.2|PUS1_CANAL (RecName: Full=tRNA pseudouridine synthase 1; AltName: Full=tRNA pseudouridylate synthase 1; AltName: Full=tRNA-uridine isomerase 1)

HSP 1 Score: 110.923 bits (276), Expect = 2.214e-25
Identity = 59/134 (44.03%), Postives = 84/134 (62.69%), Query Frame = 0

Query:   64 PWKRAKKVACLVSFSGKDYMGMQ--RNTGFATIEEELMKAFLAGGAIPQDWYDCMQKSFFQRASRTDKGVSALKMIVSLKMLY-DQEIISKINATLPPEIRLQDIKRVTKNFNSKSSCDARTYLYLMPTFAVCP 194
            P K  +KVA ++ + G  Y GMQ   +    TIE+++  A    GAI  +    ++KS FQRA+RTDKGV A   ++SLKM+  D EII+KIN  LP +IR+  I+R TK F+ +  C +R Y YL+PTF++ P
Sbjct:  144 PRKPKRKVAVMLGYCGTGYNGMQVQNDPNVKTIEKDIYDAMATAGAISAENAVDLKKSGFQRAARTDKGVHAAGNVISLKMIIEDPEIINKINDLLPKQIRIWGIQRTTKGFDCRKCCSSRIYEYLLPTFSLLP 277

[Close]

BLAST of unnamed protein product vs. SwissProt
Match: gi|74637053|sp|Q6CWQ8.1|PUS1_KLULA (RecName: Full=tRNA pseudouridine synthase 1; AltName: Full=tRNA pseudouridylate synthase 1; AltName: Full=tRNA-uridine isomerase 1)

HSP 1 Score: 109.383 bits (272), Expect = 5.770e-25
Identity = 56/126 (44.44%), Postives = 82/126 (65.08%), Query Frame = 0

Query:   69 KKVACLVSFSGKDYMGMQRNTGFATIEEELMKAFLAGGAIPQDWYDCMQKSFFQRASRTDKGVSALKMIVSLKMLY-DQEIISKINATLPPEIRLQDIKRVTKNFNSKSSCDARTYLYLMPTFAVC 193
            +KVA ++ + G  Y GMQ N    TIE+EL +AF+  GAI +     ++K+ FQRA+RTDKGV A   ++SLK++  D E+  KIN  LP +IR+ DI RV K F+ +  C +R Y YL+PT+++ 
Sbjct:   99 RKVAVMIGYCGTGYHGMQYNPPNDTIEKELFEAFVRAGAISKANSTDLKKNGFQRAARTDKGVHAGGNVISLKLIIEDPEVKEKINNELPDQIRVWDISRVNKAFDCRKMCSSRWYEYLLPTYSLI 224

[Close]

BLAST of unnamed protein product vs. SwissProt
Match: gi|442570003|sp|Q755C8.2|PUS1_ASHGO (RecName: Full=tRNA pseudouridine synthase 1; AltName: Full=tRNA pseudouridylate synthase 1; AltName: Full=tRNA-uridine isomerase 1)

HSP 1 Score: 103.99 bits (258), Expect = 3.598e-23
Identity = 56/124 (45.16%), Postives = 77/124 (62.10%), Query Frame = 0

Query:   69 KKVACLVSFSGKDYMGMQRNTGFATIEEELMKAFLAGGAIPQDWYDCMQKSFFQRASRTDKGVSALKMIVSLKMLY-DQEIISKINATLPPEIRLQDIKRVTKNFNSKSSCDARTYLYLMPTFA 191
            +KVA +V + G  Y GMQ N    TIE EL +AF+  GAI +     ++K+ F RA+RTDKGV A   ++SLK++  D  I  KIN  LPP IR+  I RV K F+ +  C +R Y YL+PT++
Sbjct:   67 RKVAVMVGYCGTGYHGMQYNPPNRTIEAELFEAFVKAGAISRANSTDLKKNGFMRAARTDKGVHAGGNVISLKLIIEDPAIKDKINEHLPPGIRVWGISRVNKAFDCRKLCGSRWYEYLLPTYS 190

[Close]

BLAST of unnamed protein product vs. nr
Match: gi|47208274|emb|CAF91572.1| (unnamed protein product, partial [Tetraodon nigroviridis])

HSP 1 Score: 219.935 bits (559), Expect = 6.266e-65
Identity = 116/293 (39.59%), Postives = 165/293 (56.31%), Query Frame = 0

Query:   69 KKVACLVSFSGKDYMGMQRNTG---FATIEEELMKAFLAGGAIPQDWYDCMQKSFFQRASRTDKGVSALKMIVSLKMLYDQEIISKINATLPPEIRLQDIKRVTKNFNSKSSCDARTYLYLMPTFAVCP---IEEILSEEYRIDAETRKRTNEVLQLLVGSHYYHNYTAGKAPG------------------------------------------LGLML--------DEVHYDRYNKRFGSDGVHDALSWDHLSDQLESFKRDIIFEDIILSEKKEKSMLEWMKNLPIHTF 305
            KKVA L+++SGK Y GMQRN G   F TIE++L+ A +  G IP++  + M+K  FQR +RTDKGVSA   +VSLK+    ++  KIN  LPP+IR+  +KRVT+ FNSK++CDARTY Y++PT A  P        +  +R+  ET +R N +  L  G+H +HN+T+ KAP                                           +GL++        +EVH+DRYNKRFG DG+H+ L W+   D +++FK   I+  I  +E++E SM+ WM  LPIH F
Sbjct:   75 KKVALLLAYSGKGYYGMQRNPGSSEFRTIEDDLVAALVKSGCIPENHAEDMKKMSFQRCARTDKGVSAAGQVVSLKLWLIDDLAEKINQHLPPQIRVLGVKRVTQGFNSKNNCDARTYAYMLPTVAFAPKDSDAASDAASFRLQPETLQRVNRLFALYKGTHNFHNFTSQKAPNDPSARRYVTHVCCGEPFMGGDTEFAVITVRGQSFMLHQIRKMIGLVIAVVKGYAREEVHFDRYNKRFGGDGLHERLEWEEQGDAIQAFKEAFIYPTITETERREGSMVSWMNTLPIHDF 367

[Close]

BLAST of unnamed protein product vs. nr
Match: gi|1325256963|ref|XP_023322848.1| (tRNA pseudouridine synthase A-like [Eurytemora affinis])

HSP 1 Score: 202.601 bits (514), Expect = 1.008e-57
Identity = 94/161 (58.39%), Postives = 120/161 (74.53%), Query Frame = 0

Query:   75 VSFSGKDYMGMQRNTGFATIEEELMKAFLAGGAIPQDWYDCMQKSFFQRASRTDKGVSALKMIVSLKMLYDQEIISKINATLPPEIRLQDIKRVTKNFNSKSSCDARTYLYLMPTFAVCPIEEILSEEYRIDAETRKRTNEVLQLLVGSHYYHNYTAGKAP 235
            +SFSGKDY+GMQRN GF TIE E + A    G I  +W +  QK FFQRASRTDKGVSALKM+VSLKM  ++ ++ K+NA LP +I+LQ + RVTKNFN KS+ DARTYLY++PTFA  P  EI+SE++R + +T    N VL+  +GS Y+HNYT+GK P
Sbjct:   68 ISFSGKDYIGMQRNAGFKTIEGEFLAALSRAGIIDPEWEEIPQKGFFQRASRTDKGVSALKMVVSLKMAEEEGMVEKVNAELPTDIKLQAVVRVTKNFNCKSAADARTYLYVLPTFAFSPATEIISEDWRCEPDTIANVNSVLKEFIGSRYFHNYTSGKLP 228

HSP 2 Score: 138.658 bits (348), Expect = 1.390e-33
Identity = 65/116 (56.03%), Postives = 85/116 (73.28%), Query Frame = 0

Query:  233 KAPGLGLMLDEVHYDRYNKRFGSDGVHDALSWDHLSDQLESFKRDIIFEDIILSEKKEKSMLEWMKNLPIHTFTPRHFESMTPEQSPLAKAYRNISRDKKNADGEEETENPEDDED 348
            +APGLGL+L+EVHYDRYNKR+GSDG+HD LSW+ + DQ+E+FK+DI+F DI  +E + KSM EWM  LP+H F PRHFE     QSPLA A  N+ R++    G+   +  ED+ED
Sbjct:  301 RAPGLGLVLEEVHYDRYNKRYGSDGIHDTLSWEKVEDQVETFKQDIVFADIFQTEIETKSMFEWMAVLPMHKFEPRHFEE-DGRQSPLAIAKANVEREQ----GKNGVKVDEDEED 411

[Close]

BLAST of unnamed protein product vs. nr
Match: gi|260817697|ref|XP_002603722.1| (hypothetical protein BRAFLDRAFT_93048 [Branchiostoma floridae] >gi|229289044|gb|EEN59733.1| hypothetical protein BRAFLDRAFT_93048 [Branchiostoma floridae])

HSP 1 Score: 190.274 bits (482), Expect = 1.132e-53
Identity = 89/178 (50.00%), Postives = 122/178 (68.54%), Query Frame = 0

Query:   58 GAKAEW--PWKRAKKVACLVSFSGKDYMGMQRNTGFATIEEELMKAFLAGGAIPQDWYDCMQKSFFQRASRTDKGVSALKMIVSLKMLYDQEIISKINATLPPEIRLQDIKRVTKNFNSKSSCDARTYLYLMPTFAVCPIEEILSEEYRIDAETRKRTNEVLQLLVGSHYYHNYTAGK 233
            G   +W  P  + +KVACL+++SG  YMGMQRN GF TIEE+L+ AF   GAIP+D  DCMQK  FQR +RTDKGVSA   IVSLKM   ++ + KIN  L   IRL  IKR T  F+SK++CDARTY+Y++PT++  P +E   +++R   +  ++ N+VL    G+H +HN+T+GK
Sbjct:   29 GGDPDWERPTAKKRKVACLLAYSGVGYMGMQRNQGFKTIEEDLLAAFYKAGAIPKDHMDCMQKMHFQRCARTDKGVSAAGQIVSLKMYMIEDAVQKINDCLAESIRLIGIKRTTNGFDSKNACDARTYMYVLPTYSFAPTKEETEQDFRATDDVMEKVNDVLSAYKGTHNFHNFTSGK 206

HSP 2 Score: 74.3294 bits (181), Expect = 4.298e-11
Identity = 30/59 (50.85%), Postives = 45/59 (76.27%), Query Frame = 0

Query:  233 KAPGLGLMLDEVHYDRYNKRFGSDGVHDALSWDHLSDQLESFKRDIIFEDIILSEKKEK 291
            KAPGLGL+LD+VH+D YN+++G DG+H+AL WD   + +E FK   I+  II +EK+++
Sbjct:  281 KAPGLGLVLDKVHFDHYNRKYGGDGLHEALEWDEHQETVEKFKEQYIYPTIIKAEKEDR 339

[Close]

BLAST of unnamed protein product vs. nr
Match: gi|1263119217|gb|PFX15933.1| (tRNA pseudouridine synthase A, mitochondrial [Stylophora pistillata])

HSP 1 Score: 190.66 bits (483), Expect = 1.901e-53
Identity = 110/311 (35.37%), Postives = 161/311 (51.77%), Query Frame = 0

Query:   67 RAKKVACLVSFSGKDYMGMQRNTGFATIEEELMKAFLAGGAIPQDWYDCMQKSFFQRASRTDKGVSALKMIVSLKMLYDQEIISKINATLPPEIRLQDIKRVTKNFNSKSSCDARTYLYLMPTFAVCPIEEILSEEYRIDAETRKRTNEVLQLLVGSHYYHNYTAGK------------APGLGLMLDEVHYDRYNKRFGSDGVHDALSWDHLSDQLESFKRDIIFEDIILSEKKEKSMLEWMKNLPIHTFTPRHFESMTPEQSPLAKAYRNISRDKKNADGEEETENPEDDEDNPKREEDGVELVPKHDL 365
            R KK A L+S+ G  Y GMQ N G  TIE+EL+ A     AI +D    M K+                            ++ KIN  L PEIR+  +KR T+ F++K +C ARTY YL PTFA     +  ++ YR+  E     N+VL   VG+  YHN+T+GK            AP +GL+LDEVH+D YN+R+GSDG+H+AL WD   ++++ FK   I++ II +E +E SM++W+++LP HT+T    E +  ++     A +N + D  N         P D+  N     D  +L    D+
Sbjct:   97 RKKKCALLLSYCGAGYNGMQINPGVKTIEQELVNALYKAEAITEDGKANMGKN----------------------------LLPKINEHLQPEIRVLAMKRTTRGFDAKGNCSARTYEYLTPTFAFAKDYQSTTK-YRVTEEKIAEVNDVLSKFVGTRNYHNFTSGKHLYCCLKVDIPKAPAVGLVLDEVHFDAYNRRYGSDGLHEALEWDENEEEIQKFKHQYIYKQIIDTEAREHSMMKWLRSLPDHTYTDERMEEIGTKKDG-NNAKQNTTADANNT-------LPHDNSGNQGGSGDAKQLTEGEDI 370

[Close]

BLAST of unnamed protein product vs. nr
Match: gi|1126186332|ref|XP_019625873.1| (PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform X1 [Branchiostoma belcheri])

HSP 1 Score: 192.586 bits (488), Expect = 3.062e-53
Identity = 89/178 (50.00%), Postives = 122/178 (68.54%), Query Frame = 0

Query:   58 GAKAEW--PWKRAKKVACLVSFSGKDYMGMQRNTGFATIEEELMKAFLAGGAIPQDWYDCMQKSFFQRASRTDKGVSALKMIVSLKMLYDQEIISKINATLPPEIRLQDIKRVTKNFNSKSSCDARTYLYLMPTFAVCPIEEILSEEYRIDAETRKRTNEVLQLLVGSHYYHNYTAGK 233
            G   +W  P  + +KVACL+++SG  YMGMQRN GF TIEE+L+ AF   GAIP+D  DCMQK  FQR +RTDKGVSA   IVSLKM    + + KIN  L   IR+  IKR T  F+SK++CDARTY+Y++PT++  P +E   +++R+  E  ++ N+VL    G+H +HN+T+GK
Sbjct:  110 GGDPDWERPTAKKRKVACLLAYSGVGYMGMQRNQGFKTIEEDLLAAFYKAGAIPKDHMDCMQKMHFQRCARTDKGVSAAGQIVSLKMYMIDDAVKKINDCLAESIRIIGIKRTTNGFDSKNACDARTYMYVLPTYSFAPTKEETEQDFRVTDEIMEKVNDVLSAYKGTHNFHNFTSGK 287

HSP 2 Score: 91.6633 bits (226), Expect = 1.156e-16
Identity = 43/123 (34.96%), Postives = 69/123 (56.10%), Query Frame = 0

Query:  233 KAPGLGLMLDEVHYDRYNKRFGSDGVHDALSWDHLSDQLESFKRDIIFEDIILSEKKEKSMLEWMKNLPIHTFTPRHFESMTPEQSPLAKAYRNISRDKKNADGEEETENPEDDEDNPKREED 355
            KAPGLGL+LD+VH+D YN+++G DG+H+AL WD   + +E FK   I+  II +EK+++ M  W+  LP+H +     E           A +  +      +G + ++ P  DED  ++  D
Sbjct:  362 KAPGLGLVLDKVHFDHYNRKYGGDGLHEALEWDEHQETVEKFKEQYIYPTIIKAEKEDRVMQRWLSTLPLHRYEGLSEEETDNSAQQQDGATQLTAEADTTREGADTSDVPAKDEDTMQQAVD 484

[Close]

BLAST of unnamed protein product vs. nr
Match: gi|1126186334|ref|XP_019625874.1| (PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform X2 [Branchiostoma belcheri])

HSP 1 Score: 192.586 bits (488), Expect = 3.160e-53
Identity = 89/178 (50.00%), Postives = 122/178 (68.54%), Query Frame = 0

Query:   58 GAKAEW--PWKRAKKVACLVSFSGKDYMGMQRNTGFATIEEELMKAFLAGGAIPQDWYDCMQKSFFQRASRTDKGVSALKMIVSLKMLYDQEIISKINATLPPEIRLQDIKRVTKNFNSKSSCDARTYLYLMPTFAVCPIEEILSEEYRIDAETRKRTNEVLQLLVGSHYYHNYTAGK 233
            G   +W  P  + +KVACL+++SG  YMGMQRN GF TIEE+L+ AF   GAIP+D  DCMQK  FQR +RTDKGVSA   IVSLKM    + + KIN  L   IR+  IKR T  F+SK++CDARTY+Y++PT++  P +E   +++R+  E  ++ N+VL    G+H +HN+T+GK
Sbjct:  110 GGDPDWERPTAKKRKVACLLAYSGVGYMGMQRNQGFKTIEEDLLAAFYKAGAIPKDHMDCMQKMHFQRCARTDKGVSAAGQIVSLKMYMIDDAVKKINDCLAESIRIIGIKRTTNGFDSKNACDARTYMYVLPTYSFAPTKEETEQDFRVTDEIMEKVNDVLSAYKGTHNFHNFTSGK 287

HSP 2 Score: 92.0485 bits (227), Expect = 1.124e-16
Identity = 43/123 (34.96%), Postives = 69/123 (56.10%), Query Frame = 0

Query:  233 KAPGLGLMLDEVHYDRYNKRFGSDGVHDALSWDHLSDQLESFKRDIIFEDIILSEKKEKSMLEWMKNLPIHTFTPRHFESMTPEQSPLAKAYRNISRDKKNADGEEETENPEDDEDNPKREED 355
            KAPGLGL+LD+VH+D YN+++G DG+H+AL WD   + +E FK   I+  II +EK+++ M  W+  LP+H +     E           A +  +      +G + ++ P  DED  ++  D
Sbjct:  362 KAPGLGLVLDKVHFDHYNRKYGGDGLHEALEWDEHQETVEKFKEQYIYPTIIKAEKEDRVMQRWLSTLPLHRYEGLSEEETDNSAQQQDGATQLTAEADTTREGADTSDVPAKDEDTMQQAVD 484

[Close]

BLAST of unnamed protein product vs. nr
Match: gi|1238853920|ref|XP_013792491.2| (tRNA pseudouridine synthase A, mitochondrial-like isoform X3 [Limulus polyphemus])

HSP 1 Score: 184.496 bits (467), Expect = 5.819e-53
Identity = 93/175 (53.14%), Postives = 122/175 (69.71%), Query Frame = 0

Query:   61 AEWPWKRAKKVACLVSFSGKDYMGMQRNTGFATIEEELMKAFLAGGAIPQDWYDCMQKSFFQRASRTDKGVSALKMIVSLKMLYDQE---IISKINATLPPEIRLQDIKRVTKNFNSKSSCDARTYLYLMPTFAVCPIEEILSEEYRIDAETRKRTNEVLQLLVGSHYYHNYTAG 232
            +E P +R KK+A L+S+SGK Y+GMQRN G  TIEE+L +A    G I Q   D  Q+  FQRA+RTDKGVSA++ IVSLK+   ++   I+ KIN  LPP+IR+  IKR TK FNSK SCDARTY Y++PTFA  P E +  E+Y I +E  K+ N++L L  G+H YHN+T+G
Sbjct:   53 SESPKQRFKKMAVLLSYSGKGYLGMQRNPGVKTIEEDLFQAMYKTGLILQAHIDRPQQINFQRAARTDKGVSAVRQIVSLKLPVTEKPDGIVEKINNHLPPQIRVISIKRTTKGFNSKISCDARTYAYMLPTFAFTPPEVLTKEDYTIPSENIKKLNDLLALYKGTHNYHNFTSG 227

[Close]

BLAST of unnamed protein product vs. nr
Match: gi|1126186336|ref|XP_019625875.1| (PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform X3 [Branchiostoma belcheri])

HSP 1 Score: 190.66 bits (483), Expect = 1.594e-52
Identity = 89/178 (50.00%), Postives = 121/178 (67.98%), Query Frame = 0

Query:   58 GAKAEW--PWKRAKKVACLVSFSGKDYMGMQRNTGFATIEEELMKAFLAGGAIPQDWYDCMQKSFFQRASRTDKGVSALKMIVSLKMLYDQEIISKINATLPPEIRLQDIKRVTKNFNSKSSCDARTYLYLMPTFAVCPIEEILSEEYRIDAETRKRTNEVLQLLVGSHYYHNYTAGK 233
            G   +W  P  + +KVACL+++SG  YMGMQRN GF TIEE+L+ AF   GAIP+D  DCMQK  FQR +RTDKGVSA   IVSLKM    + + KIN  L   IR+  IKR T  F+SK++CDARTY+Y++PT++  P +E   +++R   E  ++ N+VL    G+H +HN+T+GK
Sbjct:  110 GGDPDWERPTAKKRKVACLLAYSGVGYMGMQRNQGFKTIEEDLLAAFYKAGAIPKDHMDCMQKMHFQRCARTDKGVSAAGQIVSLKMYMIDDAVKKINDCLAESIRIIGIKRTTNGFDSKNACDARTYMYVLPTYSFAPTKEETEQDFRATDEIMEKVNDVLSAYKGTHNFHNFTSGK 287

HSP 2 Score: 91.6633 bits (226), Expect = 1.156e-16
Identity = 43/123 (34.96%), Postives = 69/123 (56.10%), Query Frame = 0

Query:  233 KAPGLGLMLDEVHYDRYNKRFGSDGVHDALSWDHLSDQLESFKRDIIFEDIILSEKKEKSMLEWMKNLPIHTFTPRHFESMTPEQSPLAKAYRNISRDKKNADGEEETENPEDDEDNPKREED 355
            KAPGLGL+LD+VH+D YN+++G DG+H+AL WD   + +E FK   I+  II +EK+++ M  W+  LP+H +     E           A +  +      +G + ++ P  DED  ++  D
Sbjct:  362 KAPGLGLVLDKVHFDHYNRKYGGDGLHEALEWDEHQETVEKFKEQYIYPTIIKAEKEDRVMQRWLSTLPLHRYEGLSEEETDNSAQQQDGATQLTAEADTTREGADTSDVPAKDEDTMQQAVD 484

[Close]

BLAST of unnamed protein product vs. nr
Match: gi|1238853916|ref|XP_013792490.2| (tRNA pseudouridine synthase A, mitochondrial-like isoform X1 [Limulus polyphemus])

HSP 1 Score: 184.496 bits (467), Expect = 2.314e-52
Identity = 93/175 (53.14%), Postives = 122/175 (69.71%), Query Frame = 0

Query:   61 AEWPWKRAKKVACLVSFSGKDYMGMQRNTGFATIEEELMKAFLAGGAIPQDWYDCMQKSFFQRASRTDKGVSALKMIVSLKMLYDQE---IISKINATLPPEIRLQDIKRVTKNFNSKSSCDARTYLYLMPTFAVCPIEEILSEEYRIDAETRKRTNEVLQLLVGSHYYHNYTAG 232
            +E P +R KK+A L+S+SGK Y+GMQRN G  TIEE+L +A    G I Q   D  Q+  FQRA+RTDKGVSA++ IVSLK+   ++   I+ KIN  LPP+IR+  IKR TK FNSK SCDARTY Y++PTFA  P E +  E+Y I +E  K+ N++L L  G+H YHN+T+G
Sbjct:   99 SESPKQRFKKMAVLLSYSGKGYLGMQRNPGVKTIEEDLFQAMYKTGLILQAHIDRPQQINFQRAARTDKGVSAVRQIVSLKLPVTEKPDGIVEKINNHLPPQIRVISIKRTTKGFNSKISCDARTYAYMLPTFAFTPPEVLTKEDYTIPSENIKKLNDLLALYKGTHNYHNFTSG 273

[Close]

BLAST of unnamed protein product vs. nr
Match: gi|585654064|ref|XP_006815224.1| (PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Saccoglossus kowalevskii])

HSP 1 Score: 182.57 bits (462), Expect = 2.273e-49
Identity = 116/326 (35.58%), Postives = 166/326 (50.92%), Query Frame = 0

Query:   61 AEWPWKRAK-KVACLVSFSGKDYMGMQRNTGFATIEEELMKAFLAGGAIPQDWYDCMQKSFFQRASRTDKGVSALKMIVSLKMLYDQEIISKINATLPPEIRLQDIKRV---------------------------------------------------TKNFNSKSSCDARTY---------LYLMPTFAVCPIE----EILSEEYRIDAETRKRTNEVLQLLVG----SHYYHNYTAGK-----APGLGLMLDEVHYDRYNKRFGSDGVHDALSWDHLSDQLESFKRDIIFEDIILSEKKEKSMLEWMKNLPIHTFTPRHFES 312
            AE   ++AK KV  L+S+SGK YMGMQRN G  TIE +L+KA +  GA+PQ   D  QK  FQR +RTDKGVSA++ +VSLKM+     + +IN +LPP IR+   KR                                                    T NF++ +S  A T          L +   F  C +E     I+ + + I  + RK    V+ ++ G    S     + AGK     AP LGLML+ VH+D YNKR+G+DG+H+AL+W+   + +  FK + I+  II +E KEKSM++W+ +LP+HT+  R  +S
Sbjct:   47 AEQNKRKAKRKVVLLLSYSGKGYMGMQRNKGVETIEGDLIKAIVTAGAVPQSHADIPQKMQFQRCARTDKGVSAVRQVVSLKMMLVDNAVEQINNSLPPSIRVITYKRTTGGFNAKNTCSHRTYSYLMPTFALSSNCNENYRVTDEVHQKAQDLLNCYKGTHNFHNFTSGKAFTEQSAMRFMRELNVSQAFVRCGLEFVVITIIGQSFMIH-QIRKMIGLVIAIIRGVAPKSTLDKCWEAGKMDIPKAPSLGLMLENVHFDGYNKRYGNDGIHEALTWEQYEETIGKFKEEHIYPSIIETEIKEKSMMKWLTSLPLHTYDTRDKDS 371

The following BLAST results are available for this feature:

BLAST of unnamed protein product vs. L. salmonis genes
BLAST of unnamed protein product vs. SwissProt
BLAST of unnamed protein product vs. nr

BLAST of unnamed protein product vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2


Match Name	E-value	Identity	Description
EMLSAG00000008220	2.536e-65	56.59	supercontig:LSalAtl2s:LSalAtl2s495:89801:92529:1 g...	[more]
EMLSAG00000000437	5.330e-8	24.34	supercontig:LSalAtl2s:LSalAtl2s1068:424499:425749:...	[more]

BLAST of unnamed protein product vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|182676393\|sp\|Q4KM92.2\|TRUA_RAT	1.317e-46	42.52	RecName: Full=tRNA pseudouridine synthase A; AltNa...	[more]
gi\|114152895\|sp\|Q9Y606.3\|TRUA_HUMAN	4.560e-46	45.83	RecName: Full=tRNA pseudouridine synthase A; AltNa...	[more]
gi\|114152896\|sp\|Q9WU56.2\|TRUA_MOUSE	1.794e-45	42.06	RecName: Full=tRNA pseudouridine synthase A; AltNa...	[more]
gi\|74627010\|sp\|O94396.1\|PUS1_SCHPO	8.776e-27	43.85	RecName: Full=tRNA pseudouridine synthase 1; AltNa...	[more]
gi\|74635069\|sp\|Q6CC39.1\|PUS1_YARLI	1.614e-26	44.35	RecName: Full=tRNA pseudouridine synthase 1; AltNa...	[more]
gi\|74637780\|sp\|Q6FV05.1\|PUS1_CANGA	5.707e-26	46.03	RecName: Full=tRNA pseudouridine synthase 1; AltNa...	[more]
gi\|3122655\|sp\|Q12211.1\|PUS1_YEAST	6.939e-26	43.24	RecName: Full=tRNA pseudouridine synthase 1; AltNa...	[more]
gi\|1160421878\|sp\|Q59S63.2\|PUS1_CANAL	2.214e-25	44.03	RecName: Full=tRNA pseudouridine synthase 1; AltNa...	[more]
gi\|74637053\|sp\|Q6CWQ8.1\|PUS1_KLULA	5.770e-25	44.44	RecName: Full=tRNA pseudouridine synthase 1; AltNa...	[more]
gi\|442570003\|sp\|Q755C8.2\|PUS1_ASHGO	3.598e-23	45.16	RecName: Full=tRNA pseudouridine synthase 1; AltNa...	[more]

Pages

BLAST of unnamed protein product vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|47208274\|emb\|CAF91572.1\|	6.266e-65	39.59	unnamed protein product, partial [Tetraodon nigrov...	[more]
gi\|1325256963\|ref\|XP_023322848.1\|	1.008e-57	58.39	tRNA pseudouridine synthase A-like [Eurytemora aff...	[more]
gi\|260817697\|ref\|XP_002603722.1\|	1.132e-53	50.00	hypothetical protein BRAFLDRAFT_93048 [Branchiosto...	[more]
gi\|1263119217\|gb\|PFX15933.1\|	1.901e-53	35.37	tRNA pseudouridine synthase A, mitochondrial [Styl...	[more]
gi\|1126186332\|ref\|XP_019625873.1\|	3.062e-53	50.00	PREDICTED: tRNA pseudouridine synthase A, mitochon...	[more]
gi\|1126186334\|ref\|XP_019625874.1\|	3.160e-53	50.00	PREDICTED: tRNA pseudouridine synthase A, mitochon...	[more]
gi\|1238853920\|ref\|XP_013792491.2\|	5.819e-53	53.14	tRNA pseudouridine synthase A, mitochondrial-like ...	[more]
gi\|1126186336\|ref\|XP_019625875.1\|	1.594e-52	50.00	PREDICTED: tRNA pseudouridine synthase A, mitochon...	[more]
gi\|1238853916\|ref\|XP_013792490.2\|	2.314e-52	53.14	tRNA pseudouridine synthase A, mitochondrial-like ...	[more]
gi\|585654064\|ref\|XP_006815224.1\|	2.273e-49	35.58	PREDICTED: tRNA pseudouridine synthase A, mitochon...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold916_size81488	supercontig	scaffold916_size81488:10105..19013 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold916_size81488-snap-gene-0.6-mRNA-1	maker-scaffold916_size81488-snap-gene-0.6-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold916_size81488:10105..19013+

gene from alignment at scaffold916_size81488:10105..19013+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold916_size81488-snap-gene-0.6 ID=maker-scaffold916_size81488-snap-gene-0.6|Name=unnamed protein product|organism=Tigriopus kingsejongensis|type=gene|length=8909bp|location=Sequence derived from alignment at scaffold916_size81488:10105..19013+ (Tigriopus kingsejongensis)
CTAAAGGTAAACAACGTGTTCCACTTTTTCGTGTTCCCGGTGGCAATTCC
CCCCCCGCACATATCTTGAACCCATCAAAAGCTGAATGTTGGCTTCATTC
AGGCGCATAAATTGTCCCAGATTCGCCTCGATAGCCGGTAAAGCGGTGGA
GTGAGCGGATTATGCCTTTATCGCGGCCTTCATGGTGCTCCTTTTGTTTC
CAGTCTCAAGTTGCTGCCGTTGCTCACATCAACGGATTTCCTGCCCCATA
CCACTCTACAGCAACATGTCTACGGATCCCCCACCAGTTGTCCCAGCCGA
GGCGCCAGACCTGGGCGCCAATGGGGCTAAAGCCGAGTGGCCGTGGAAAC
GAGCCAAAAAAGTGGCGTGTTTGGTGTCTTTCAGCGGCAAAGACTACATG
GGCATGCAAAGGTAATTGATCAGATTGGCATCATGAGCCGCAGCACTTGG
ATGCTGTGGGATCTAAGCCAGTCTCACTAGAGAGGGCAAGAGCAAGGCCA
GCCCAAACAGACAACTCGATTGCGATAGAGTTTGATACAATCTGTTACAA
AGATTGGTAGCCGAGGGGTCATTCTTTTGTTTTTGGACGAATGTGGATGA
TTTGAAGTAACAATTCCCAAAGCGGAATGCTTTCATACTTGTAGCAAATG
GCAATAAACGAAAGCACACTTTTCAAGTTTATTTCAGTGTCATATCTGCT
TTCCGAATTTCCTCAATGTAAAAGGATCACAACAGCATCACACCTCTGCT
ATGATACGGACAGCCAAAATACAATGTATTATTGTACTACTAGAGAGCAA
GTGATCATGAACAGTTTAAGACATGAATACGATCTCAAGAGAGGAAGCGA
AAGTTCAGGTCAATAATATTGAATGCTTATAGTCTGCCTCCCACCGTCAT
GTCAAAATACATTCCAATTGTCTGTTTGATTGGGTCACGTGCCAAAATGG
AGGGTTCAATAGCATGTGTGCCATGCTCCCGCAGTAAGGAACTGGATTTA
AATGCATGAATCCCTCTAGCTAGCCGTTAAAAGTGAATTAACCATATATT
TGTGGCCTTAAGTGTTTTAAAGCCACGGTTAAAAACGTTGAGGAATCTGT
GTTGTTAATTTGTTCAGCCAACTGAAATTGGAAACAACACCAATCTCGAG
GCTTGATGCAAGCGAGAAGACCTTAAAAATGTGTGATCTGAGTCTTTCTT
TAGCCTACTACTTTTTTACCTCGGAAACTGAAGGGTTACTCTGATTGTAT
GATTGCTCCTTTTGTGTCCCTAGAAATACTGGGTTCGCCACGATTGAAGA
AGAGCTAATGAAAGCATTTTTGGCTGGAGGAGCCATCCCTCAGGATTGGT
ATGATTGCATGCAGAAGAGCTTCTTCCAACGGGCCTCGCGCACGGATAAA
GGCGTGTCGGCGTTGAAGATGATTGTGTCCCTCAAAATGCGTGAGTACCC
CTTTTTCAGTCGACTTCCATTGAGGTATTTTATTGTACGTAGTACATGAC
TTTAAAGTATATTTGGATTGAATAAGCTTTGGTAGATGACATCAATGACA
AACGTGAGTGGAGCCCCAAGCCTCATGTGACGGGTTCGGTGGGCATCGAC
ATATGATTGGGCTTGATCAAGGCCTTCAGGGCATGACACTTCTCGTCCAG
TCGCAAGCTCTCGGAGCGACCGATCCTGGACTCGAGGTTCCGGCTGTTTT
TCCTCAATTCCACCGACTCTCCCCCCAGAGGGTCGTGGCTTCCATCCTCG
TTGGTCAGAGGCGAATGCTTGCCCATGTTGGGAGTGGCCAAGGGGTCGGT
TTGGGTGCTCACCACATCCCAATCCGATTTGTCTGACAGATCCATGGATT
TCCGCGAGGAAGCACTCTTCCGATGGAAGATGTTCCAAAAGGATCGCCTC
TCCGGCTTGGTCTTCATCTCCTCGCCGACTTTGCTATCACTTTGACCATC
ACACAAGTTGGGCACGGACTGACTCATTCTCTTTTGCCGATACTCCTCGT
CGTTGTCCGGCCAGGACTCGGACAAAAGGCGTTCCCGAGGTTTGACCGCG
TTGGGAGGGATTGGAGGCGGTGCCTTGGCTTGGCCATCATTCGACCAAGA
CGGGGGCTTCAGAATTCTGTGTCTGACCTTGGGACTGCTCCGTGGACAGC
TCTCTTGGTCCTCTGCAATGGCTGGCATCGTGCTCTGGCCATTGGGTCGG
CCAAGACCGCGGGCATTGGTCGCGCGTGGAGGTCGCCGATTCTGGGGAGG
CCGCGGCCTCTGAAAATGTTGGAGCTTTTCCGTCTCGGCCACCCCAAACT
CGATTTTCTCACAATATGGTTCCTCCTCTGCGAGTTTGCCGGATTTTTTC
TTCTCTATGCTCTTGGAGGGCGAGGAGAAGATGCTCCGAATGAATCCCGT
CAGGCTTCGACGGTCCTTTTTCTTGGCCTTACCCCCCATTGTCCCTCCGG
AGTGGGGCGTTGATCCACCAATCTGCCGAACTGTGATTAGTTCACTGGAA
TTTCCCTTCTCGGATCACCAACACGCACTTGGAGCTTCGGAGAATCAGAA
ACTGCTCCCCAATGATAACACCGCCTCACTGGCCGAGTGATGAGATTCTA
CTCGAGGGCTGCAAGTGGCATTCTCGTTGTTGCTTGTTCAAAGCTAGGCC
ATATCTCCAGTCCTGCCAGTCTCGAATTTCAGTCACGAATCAGCCTCGTT
TTGTTTGGTGATAGAAATTAGAGCGACATAGAACTCCCATTAGGACTGCA
ATTCTGATGGTGTCAGGAAAAGCTGATCCAACAAGGACATGGGAGCCTTT
GTTATCTCCAGTCCAAGTGTGCTCTTCCAGATACGGTCGAAGTAGATAGT
GGCAGGTTGGTCTGAGAGGAGCCTTCGCGAATGGCTAATCATTGGAACAC
TTTAGACGATGCCAAATACCCTTTGGCCTGCGTAGTTGCACTGGATTGGC
TTTCAATTGTTTGTCCTTTGCTGTGCATAGGCAATCGAGGAAGCCTTTTC
GACAAGAGTCAGGGCAAAAATTGCCGTTACTCTCACGAACACGAAACCCA
GCGAGTGTGGTTGGAACATGTGATTAATAACAACCAGTAGCCACCGAGTC
CAGAATGAAAATGATGTTCAAAGAGCACTCGCGCTTCCCAAAAAAATCTT
TTTTTCGCAACGCCCTGCAATTCTGGATGAATCCATTCAGAGAGGAGGAG
TATTTTCACACGACTGAGTTGCCAACCAAGCATACATGTGGATGCCTCGA
GTGTCTGTCCATGGATGGTCACAGACTGCGCGTATCTGTCCCCACACGGA
GCAGCCTGGCCAGCTCTCGACCTGTGCGAGGCTTAATCAGGGTTGACAGG
ATTGTGTTCCACCGTGACTGGTGTGCCCGGTGGGACCCGAGATTTCTCCG
GGGATCACGGTGATCATCTCTGGCCAAGTCGCGTGTGAAACTTCCCCTGG
CCAATCTGTTCAAGGGCTCTTCGAGCTAACCAAATGGGTGGGCCTTGACG
GGCGGCGTCGATGGGTGGAGCATGAAGGTGCCATTCTAATGTCATTATGC
CTGAATGAGACCTGATTACACAAGAGGGACTGGCGGAGCCGTCCAGATCA
TCAGATTAGCCTGCCACTGTGCATTCATAAAGCGTCCAACACATTTAAAG
GCTCACTTTGAATACGTACTCTCGACCAACGAGTGAAAACCGGAGGGGAA
AAGGTGGCAGACCGAATTGTTTTTTGTCAGGATGAAAGTTCAATGAGCAT
GACATTGGCGATTCCAGGCCAGGAGGCTGCCTGACGTTGGCCAAGCGAGG
GTGCCAATGATGAACAGCAATTTTTGACGATTTCAGGATTGTGTCTTGTG
AAAGTTAATTAGATTGAGATCATCGAGAGAGTGGCTAACTTTTCAATCAC
GACAAAGAGGCGTGTGATTGTGTTGCCAATGCGCCTCGTCGCAGCCATTG
CTCCATGGGGCTTTTAATTGTACTTCCTGCCGTTTGGTTCACACATCACC
AAGCATGTAAATGTGGACAAATCCCCAAGGCAGTGTTGGTGAGTGGTTAC
AATTCCTGTCACCGATTGGCCATGAGTCCATCACCATCCCACAAAAACAC
ACACACTTCAGCCACTCTTGTTTGGCTCCTCCAAAAAAATCGTACGTGGA
CAGAAGAACCTTTTAAAAAACTGATTAGCCTCTAGCCTAACCGAAAATAA
GTATGTAGTGATGTACTAGATTCTTCTGAAATTCTGTTCGAAAAGAAGTC
GCCCGAGTCGAGAGAGTTCGCTTGAAAATAAGACCCATACAGTACAATAT
AGACCCAACCCCTAAGATTCGTCCAAGTTTTGGTCAAAGAATCAAGGCAA
AACACCGAAACTTGCCCAAGAAAACCAGCCCACAAAAAACCACAGTGTAT
TCTTTTCGAATTTTTGCATTGTTCGAATAACATGGGGTAATGAACAAAAT
GTCTCCTAATGCTTGTAGGGTATGAAAGGTGCAACACTCAACATTGCTGG
ATTGAAGCAATAGCTCGAGGCGCAGGTGAAAAAAAACGTGGTGCAGGTGT
CACCAATGAAGATGCGTGAGTTGAAAGTACTCACGTAACATCAAAGGTTC
AGGAAAGGCCCAGACGGCAAATTCAGAGTATGTTGTCACTAGCTTGTATT
TTGTTGACAATATAGTGTCTTCATGTAAACAAGTAGGTACTAGATAGTGT
TGTGGTGTTCTAATCTTTGCCAAACAAAGTTAAACCCATGACGAAAACAC
AATATTCAGACCTGCTTGAAGTAAGGACTAGACGCAAGTTAATTAGCCCT
TGTGTAATAACCGCAATGTATTTTTTTTATGAAATGCCAAGACATTGACT
TGTTTGTTCACAACTCTCCTTGAGGTGACATAAAAGGCGAAATATTTGCT
CTCGCTCCGATGAGTCCAAGATATAAATTATAAATTGGTGGTTTTTGAAC
TTGCCGTGTGTTTCGTTTAAAATGCTCCATCTATCTGTGAGGAAAATATC
CCCTAGAGAGGGTAATAAAAATCGCTTAAATGTGGAAGATTGGCCCATAA
AGTGTCTCAGAACTGTAAAACGTTATTTCCTGTAACTCTTCATCGTACAA
TCTCAAGTATCTGAACAGATTTTTTTGCTCCCTCAATACTTTGTTATAAA
ATACGAAATTTCAATAATTTCGTAGTTCATTTTTAACTTACCGGTTCAAG
AGTTGTTCAAAAAGAACATTTCGCTGAAAAAAAACACAGATTGTACTCTA
AATTATCAGTTTGCGGTTTAGGTCGTTTTTTCCCAATTACAATTTGGGTT
GGTGGCCAACATTTTAAGGAATCACATAATAAGTAGGTGCATCACTAATG
TAGAGCTATTTCAGTGGGATTGAAAATATTACTTAATATGGTATAATATT
CAATATTCAACTATTGGGGCAAAGAGTTCAAATTCTGGTCGTTGTGGAAT
CTACATACTGTATAACGTTCTCATTATGCCAAGTGTTGCACTTAGTTATT
CGGAAGTCAAAATGTAGGAGTTATTCGGAAGTCAAAATGTAGGTCGTTTT
TTGTGAATGGAATGCCAAAAGCCTCTTTGGTTGCCAGGTTGGTGCGATTG
TTCAAGGGCAATTGTTTAATGAGGCATGGTTAAGTGTCTGGCATTTGGTG
GCCTGTCCATTCCCACAAGGCCGAGGCTGGTGTTTTAAGCCAAAAAAATT
CAAATCATTGCCGGCTAATTCCATCTTGGGGACTCCTAGCTAGCCATGGC
TACCATATTGCACCTGCTCCCATGGACTATTGTGGAAATTTTGCAAGCCT
CCAGAACGAATTCGAGTTTCAAAGCGCTCGTGATATTGTCATAATGTGTC
ACATTGGCCATCTGTGGTGGAAAAGTGATTTCGAATGGCCGTTTTAGCCT
AGACGCGGAAAAATTACCCCGGCGACTGCTCAAGTTCCATAGATCCCGCT
TGTCTCACCGCGGCCAAAACTTTCCCTCGCATCCAATTAGATTCTTGTCG
AGATTTCAACCCCACGATCTAACCTAATACTTTCAGTGTACGACCAAGAG
ATCATCAGCAAAATCAACGCCACTCTCCCACCCGAGATCCGCCTTCAGGA
CATCAAGCGTGTGACCAAGAACTTCAACTCGAAATCCTCGTGCGATGCCA
GAACCTACCTCTACCTGATGCCCACTTTCGCCGTGTGTCCCATAGAGGAG
ATTCTGTCCGAGGAATATCGAATTGATGCCGAGACTCGGAAGAGGACCAA
TGAAGTGCTCCAGCTCTTGGTGGGATCGCATTACTACCACAACTACACGG
CTGGCAAGTAAGAGACTTTGGAGAAGACATTATCCCACATTGGTTTAGTC
TCCCCCAAATGTCCCCGCTAACTTGTGGTTGGAATTCGGAACTTGGCGGT
TTCGGTGGCTAATCGGCGGTCACGCTGGCAGATTCTGGTGATAATTCATG
GATAAAATTGTCCTCCAGTGATGACTTCTCCACAGGGAGGACACTCTGGA
TGTAACATCTGGGGCGTACAGAGTTAAGTGCCCTAGTTGGAAATGCATTG
CCTTAAGTAGGTCGTAGGTACACACACTAATAATACTTCGTGAACACATT
TCCTCATCCTCGCGAAAAACGTGTTGCTTTCGGTTTAGAAACCCGCTGAA
ATGGATGCATTTATTTTTATTCAACGAGCAATAATGAAATTTTATGGTTG
CACGGAAAAGGAATGAAACCAAAATGAAATCCCAAATGCAGTCTGAAGTT
CATTGGCGCGTGGGCGTTTAGGCTACACGTTTTCAAAGGGCTTTTTCACC
TGATATCGCACTTAAGGAGGAAAAATATTAATATTAAACTCGTGTTGGCG
TAGCATCAACTTAGCTTCCCCCACTTGCGCCATTTTGTCTCTTCTTCCTT
CTTAATTGATACTTGGGTGTTGTGGATAAAATCACGATGACAGATAGCTA
CAAAATTGGCTTAGGTGTGTATAGCACTGATTGAACATTAACTACTTTGA
TCATATTTAGTTGCGTTGATTCCAGTTAAGTTTTCTAGGGCAGACGTGGC
GATATAAGTTAGACCCTCGACCCTCAGATAAACCATTAGCGAAAGCTTAT
GGTGCTTACGCAACGTTATTAGTAGAGTTTCAAAATGCAACTTGATCCAC
AAAATACAACTTTTGGCATTTTTGATATTTTGAGCAACTTATTTTTACAT
CATTTTCAGCATCTTTCTTGGTAACTTTTGCAACTTCTTACACTTCCCGC
CCAACCTTTACCGCAACTTTATATCAGAGCAACCCTGTTAAATGCTGATC
CGACAAACTTCAAGGGAGCATCAGAAACTTTAAGGCTCTATAAGGGGCAG
ATGAAGTAAATATAACTTTTTCCGAGCTCTAGTTAGTAGTGTGTCTTTGA
TTGGAATTGCAATGGCTAGTTTGACCTTTTTCAAACGCTGATGCTCTTTT
TTGGAAGATTTATCGTAGGTCGAGGCATGGGTACTAGAAACACCTGGAGG
TCGCACAGAACGAAAAAATGTGTCCAAAGACGGCATGGTTCAGGAAGTTC
GAAAGCCGTTAATGCAATCCATTGACGGGCAGGAGGTGCGCAAGACATTT
CTACCAGTTCTGTAGGGTTTAAGAGACCATCAACTTGTTACTCTGCCGTC
TTTGGACACTTTTTTCGTTCGGTGCGACCTCCAGGTGATTTTAGTACTCC
ATGGTCGAGGCTATACCTCATTGAATCAGCTGACATTGCTCCAACATGGT
GCCTACCCTAAATACGGGTATGATAAGGAAACTTTGTAATTAATGTGCAC
CTCTGAAAGCACCTGCAAAGGATTTCGATTTTCGCCTCTGTTCTGTGGTG
ATATTGAAACTCGGTTAATATAATGGGGTCTTAAAGACGGTGAGTGAAGG
GGATATCGTTATCTTGTCGGGGAAACCCTGTAAAGCGCTCGAATGGGGGT
CCACATTCAACTATTTCTGATCCATAGCTTTGTTCATGTACTGTGTGTTA
AGAATTCTATGATTCACCCAACCGGATTTTCCTCCTTTCAGATTGCCTCT
CGAGCCCTCAGCGTTGCGTTTCATTACGGAATTTGAAATGGGAGAGCCTT
TTGAAGCAGAGGGCCTTGAGTTCGCAGTCATCAAGGTCAAAGGCCAAAGT
TTCATGTTGCACCAAATCAGGAAAATGATTGGCATGATGATAGCCGTCGT
TCGAGGTCATACGAGCAAGAGCAAAATCGAAGAAACTTGGGGCAAAGATC
GCATTGATGTTCCGAGAGCTCCGGGCTTGGGACTAATGCTGGACGAGGTA
AGAGCAGACCGGAACACTGACTCATAGCTCTTCACGAACTACCTTAACAT
TCCAATCGATCTATTCCATGAAAGTTTCCCGTCATTCTCCCCAGAAGTCT
AATAATGAAGTAAACATCCATTCAATGATGCCGTATATCGCAAAATGAGG
GGTATTTCTATTTTTAGGTTCATTACGATCGGTATAATAAGCGTTTCGGT
TCCGATGGTGTTCATGATGCGCTCAGCTGGGATCATTTGTCGGATCAGTT
GGAGAGTTTTAAGAGAGACATCATCTTCGAGGACATTATTCTAAGCGAGA
AGAAGGAGAAGAGCATGCTGGAGTGGATGAAAAATCTCCCCATTCACACT
TTCACACCCAGACACTTTGAATCCATGACCCCGGAACAATCGCCTCTGGC
TAAAGCTTATAGGAACATCAGTAGGGATAAAAAGAATGCCGATGGGGAAG
AGGAAACCGAGAATCCCGAGGATGACGAAGACAATCCCAAACGAGAAGAA
GATGGAGTTGAACTCGTTCCAAAGCATGACTTGAAGGTGTAATGTGATAA
ATATTCAGGCTTTGTGCGAAAGAAATACATCAATCTGTTCTACATGATCA
AAACACAGA

Synonyms

The feature 'unnamed protein product' has the following synonyms


Synonym
Tk11718

Add to Basket

Pages

Pages

Search form