lim domain only protein 3-like isoform x1, maker-scaffold921_size81085-snap-gene-0.13 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of lim domain only protein 3-like isoform x1 vs. L. salmonis genes
Match: EMLSAG00000000532 (supercontig:LSalAtl2s:LSalAtl2s1085:182875:183799:-1 gene:EMLSAG00000000532 transcript:EMLSAT00000000532 description:"maker-LSalAtl2s1085-snap-gene-1.5") HSP 1 Score: 102.064 bits (253), Expect = 5.212e-26 Identity = 56/156 (35.90%), Postives = 83/156 (53.21%), Query Frame = 0 Query: 34 IRDFCRNHQVRDLRYVWDDVSEVD----GMLVVDGRRIIVPKQVRRNLLDVLHVPHLGAEMTMRNAEELFFWPGMREDIIKLVNQ--------PSLPKEPFVSSDAAIPMEHVDVNLFEAAVVHWLAMVDRFSSFIFLQWLRHLATYMLKALDVFW 177 +R F NH + L +WD +S D +L+ D RIIVP ++ +LH+PH T + A++L+FWP + DI ++ + PS P EP ++S+A M HV NLFE VH+L MVDR S F F+ L L+T + + + W Sbjct: 89 MRKFPINHPAKQLSSIWDQLSLFDYDEYTLLIHDYNRIIVPSAEGERIVQLLHIPHECILKTRQTAQQLYFWPNINNDIKNMIEKCDSFQKFLPSKPDEPTINSEAEYAMPHVASNLFEYRGVHYLVMVDRLSDFPFVAKLNSLSTVAVTKILLSW 244
BLAST of lim domain only protein 3-like isoform x1 vs. L. salmonis genes
Match: EMLSAG00000011510 (supercontig:LSalAtl2s:LSalAtl2s798:118786:129351:-1 gene:EMLSAG00000011510 transcript:EMLSAT00000011510 description:"maker-LSalAtl2s798-augustus-gene-0.6") HSP 1 Score: 100.138 bits (248), Expect = 2.451e-25 Identity = 42/46 (91.30%), Postives = 46/46 (100.00%), Query Frame = 0 Query: 168 YMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLR 213 Y+LKALD++WHEDCLKCGCCDCRLGEVGSTL+TKGNLILCKRDYLR Sbjct: 30 YLLKALDMYWHEDCLKCGCCDCRLGEVGSTLYTKGNLILCKRDYLR 75
BLAST of lim domain only protein 3-like isoform x1 vs. L. salmonis genes
Match: EMLSAG00000003018 (supercontig:LSalAtl2s:LSalAtl2s1710:97106:98011:-1 gene:EMLSAG00000003018 transcript:EMLSAT00000003018 description:"augustus-LSalAtl2s1710-processed-gene-0.3") HSP 1 Score: 94.7449 bits (234), Expect = 3.333e-23 Identity = 50/145 (34.48%), Postives = 76/145 (52.41%), Query Frame = 0 Query: 34 IRDFCRNHQVRDLRYVWDDVSEVD----GMLVVDGRRIIVPKQVRRNLLDVLHVPHLGAEMTMRNAEELFFWPGMREDIIKLVNQ--------PSLPKEPFVSSDAAIPMEHVDVNLFEAAVVHWLAMVDRFSSFIFLQWLRHLA 166 ++ F NH + L +WD + D +L+ D IIVP R +L +L++PH G T + A++L+FW + I ++ PS P EP ++S+A M HV +LFE VH+L +VDRFS F F+ L L+ Sbjct: 12 MKKFSINHLAKQLWSIWDQLFLFDYGKYTLLIYDNNHIIVPSAERERILQLLYIPHAGIVKTRKTAQQLYFWSNINNYIKNMIZNCDSCQKFLPSKPDEPLINSEAKYAMSHVASDLFEYRGVHYLPLVDRFSGFPFVAKLNSLS 156
BLAST of lim domain only protein 3-like isoform x1 vs. L. salmonis genes
Match: EMLSAG00000003770 (supercontig:LSalAtl2s:LSalAtl2s2036:9528:10163:-1 gene:EMLSAG00000003770 transcript:EMLSAT00000003770 description:"augustus_masked-LSalAtl2s2036-processed-gene-0.0") HSP 1 Score: 70.0922 bits (170), Expect = 7.516e-15 Identity = 36/112 (32.14%), Postives = 56/112 (50.00%), Query Frame = 0 Query: 40 NHQVRDLRYVWDDVSEVDG----MLVVDGRRIIVPKQVRRNLLDVLHVPHLGAEMTMRNAEELFFWPGMREDIIKLVNQ--------PSLPKEPFVSSDAAIPMEHVDVNLF 139 +H + L +WD +S D + + RII+P + +L +L + H G T + A++L+FWP + DI ++ PS P EP ++SDA M HV NLF Sbjct: 100 SHPAKQLSSIWDQLSLFDDYEYTLRIYHNNRIIIPLAEQERILQLLQIRHAGIVKTKKTAQQLYFWPNINNDIKNMIENCDSCQKFLPSKPDEPIINSDAKDAMSHVASNLF 211
BLAST of lim domain only protein 3-like isoform x1 vs. L. salmonis genes
Match: EMLSAG00000010483 (supercontig:LSalAtl2s:LSalAtl2s696:31985:42695:-1 gene:EMLSAG00000010483 transcript:EMLSAT00000010483 description:"maker-LSalAtl2s696-augustus-gene-0.26") HSP 1 Score: 70.8626 bits (172), Expect = 1.542e-14 Identity = 36/88 (40.91%), Postives = 47/88 (53.41%), Query Frame = 0 Query: 165 LATYMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQC 252 L ++LK LD WH CL+C C +L E F K N + CK D+ R +G C C IP +++ RA+ VYHLECF C C Sbjct: 40 LDKFILKILDKNWHSKCLRCNQCGIQLKE---KCFLKNNDVFCKDDFFRKYGPK--CGQCGTGIPPSDVIRRAQDFVYHLECFICTIC 122
BLAST of lim domain only protein 3-like isoform x1 vs. L. salmonis genes
Match: EMLSAG00000004956 (supercontig:LSalAtl2s:LSalAtl2s260:1196109:1202410:1 gene:EMLSAG00000004956 transcript:EMLSAT00000004956 description:"maker-LSalAtl2s260-augustus-gene-12.10") HSP 1 Score: 68.1662 bits (165), Expect = 1.958e-13 Identity = 36/86 (41.86%), Postives = 48/86 (55.81%), Query Frame = 0 Query: 168 YMLK-ALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQC 252 Y+L+ A ++ WH CLKC C L E T F + CK+DY+RLFGT C C + + VMRA+ ++HLECF C C Sbjct: 41 YILRVAPNLEWHAACLKCNECQMFLDE-KCTCFVRDGKTFCKKDYVRLFGTK--CEKCCRSFGKNDYVMRAKNKIFHLECFRCVAC 123
BLAST of lim domain only protein 3-like isoform x1 vs. L. salmonis genes
Match: EMLSAG00000008243 (supercontig:LSalAtl2s:LSalAtl2s498:126445:127976:-1 gene:EMLSAG00000008243 transcript:EMLSAT00000008243 description:"maker-LSalAtl2s498-augustus-gene-1.8") HSP 1 Score: 66.6254 bits (161), Expect = 4.513e-13 Identity = 33/88 (37.50%), Postives = 50/88 (56.82%), Query Frame = 0 Query: 168 YMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHR 255 ++++ LD WHE C+KC C +L E F K + I C+ D+ R +G CS S++I +MV +AR V+HL CF C C+ + Sbjct: 19 FVIRVLDRPWHESCVKCEDCGTQLNE---KCFAKYDRIFCRADFYRRYGPR--CSGXSEIISPTDMVRKARNRVFHLNCFTCVVCHKQ 101
BLAST of lim domain only protein 3-like isoform x1 vs. L. salmonis genes
Match: EMLSAG00000009292 (supercontig:LSalAtl2s:LSalAtl2s5955:1480:1986:-1 gene:EMLSAG00000009292 transcript:EMLSAT00000009292 description:"maker-LSalAtl2s5955-augustus-gene-0.2") HSP 1 Score: 63.1586 bits (152), Expect = 8.056e-13 Identity = 36/91 (39.56%), Postives = 45/91 (49.45%), Query Frame = 0 Query: 165 LATYMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHR 255 L ++L LD WH +C+KC CC L E F K I C D+ R FGT C C I + V +AR VYHL CF C C+ + Sbjct: 14 LDRFLLYFLDKTWHSNCVKCQCCRKLLDE---KCFYKEGKIYCHEDFYRCFGTK--CGGCGDGIHPTDFVRKARNKVYHLHCFTCSLCSKQ 99
BLAST of lim domain only protein 3-like isoform x1 vs. L. salmonis genes
Match: EMLSAG00000005711 (supercontig:LSalAtl2s:LSalAtl2s309:601203:606132:1 gene:EMLSAG00000005711 transcript:EMLSAT00000005711 description:"augustus_masked-LSalAtl2s309-processed-gene-6.0") HSP 1 Score: 65.855 bits (159), Expect = 1.066e-12 Identity = 34/92 (36.96%), Postives = 48/92 (52.17%), Query Frame = 0 Query: 162 LRHLATYMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCN 253 LR + Y L A+ WH CLKC C L E + F K I CK DYLR++ C C I ++V++AR ++H++CF C C+ Sbjct: 33 LRIVDKYYLSAIAQKWHTSCLKCSECGVEL-ENQISCFEKEGSIFCKDDYLRIYANNRQCYRCLSEIQPSDLVIKARHCLFHVDCFRCATCD 123
BLAST of lim domain only protein 3-like isoform x1 vs. L. salmonis genes
Match: EMLSAG00000008680 (supercontig:LSalAtl2s:LSalAtl2s537:94655:96275:1 gene:EMLSAG00000008680 transcript:EMLSAT00000008680 description:"maker-LSalAtl2s537-augustus-gene-1.10") HSP 1 Score: 65.4698 bits (158), Expect = 1.241e-12 Identity = 32/88 (36.36%), Postives = 48/88 (54.55%), Query Frame = 0 Query: 168 YMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHR 255 Y+L+ WH CL+C C + + S+ F K +++ CK DY R FG+ C CS+ I + V +AR +YHL CF+C C + Sbjct: 98 YILQVAGQSWHSTCLRCSVCQ-EILDSHSSCFIKDDVLFCKLDYARTFGSK--CYKCSRNICPSDWVRKAREQIYHLACFSCDGCKRQ 182
BLAST of lim domain only protein 3-like isoform x1 vs. SwissProt
Match: gi|123899828|sp|Q3B8H4.1|RBTN1_XENLA (RecName: Full=Rhombotin-1; AltName: Full=LIM domain only protein 1; Short=LMO-1) HSP 1 Score: 166.777 bits (421), Expect = 6.072e-51 Identity = 74/89 (83.15%), Postives = 82/89 (92.13%), Query Frame = 0 Query: 168 YMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRY 256 Y+LKALD +WHEDCLKC CCDCRLGEVGSTL+TK NLILC+RDYLRLFGTTG C+ACSK+IPAFEMVMRAR NVYHL+CFACQ CN R+ Sbjct: 35 YLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRF 123
BLAST of lim domain only protein 3-like isoform x1 vs. SwissProt
Match: gi|82213250|sp|Q8JFQ2.1|RBTN1_DANRE (RecName: Full=Rhombotin-1; AltName: Full=LIM domain only protein 1; Short=LMO-1) HSP 1 Score: 166.777 bits (421), Expect = 6.349e-51 Identity = 74/89 (83.15%), Postives = 82/89 (92.13%), Query Frame = 0 Query: 168 YMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRY 256 Y+LKALD +WHEDCLKC CCDCRLGEVGSTL+TK NLILC+RDYLRLFGTTG C+ACSK+IPAFEMVMRAR NVYHL+CFACQ CN R+ Sbjct: 34 YLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRF 122
BLAST of lim domain only protein 3-like isoform x1 vs. SwissProt
Match: gi|132532|sp|P25800.1|RBTN1_HUMAN (RecName: Full=Rhombotin-1; AltName: Full=Cysteine-rich protein TTG-1; AltName: Full=LIM domain only protein 1; Short=LMO-1; AltName: Full=T-cell translocation protein 1) HSP 1 Score: 166.392 bits (420), Expect = 6.843e-51 Identity = 74/89 (83.15%), Postives = 82/89 (92.13%), Query Frame = 0 Query: 168 YMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRY 256 Y+LKALD +WHEDCLKC CCDCRLGEVGSTL+TK NLILC+RDYLRLFGTTG C+ACSK+IPAFEMVMRAR NVYHL+CFACQ CN R+ Sbjct: 35 YLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRF 123
BLAST of lim domain only protein 3-like isoform x1 vs. SwissProt
Match: gi|119361442|sp|Q0P5B3.1|RBTN1_BOVIN (RecName: Full=Rhombotin-1; AltName: Full=LIM domain only protein 1; Short=LMO-1) HSP 1 Score: 166.392 bits (420), Expect = 7.545e-51 Identity = 74/89 (83.15%), Postives = 82/89 (92.13%), Query Frame = 0 Query: 168 YMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRY 256 Y+LKALD +WHEDCLKC CCDCRLGEVGSTL+TK NLILC+RDYLRLFGTTG C+ACSK+IPAFEMVMRAR NVYHL+CFACQ CN R+ Sbjct: 35 YLLKALDQYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRF 123
BLAST of lim domain only protein 3-like isoform x1 vs. SwissProt
Match: gi|50401115|sp|Q924W9.1|RBTN1_MOUSE (RecName: Full=Rhombotin-1; AltName: Full=Cysteine-rich protein TTG-1; AltName: Full=LIM domain only protein 1; Short=LMO-1; AltName: Full=T-cell translocation protein 1) HSP 1 Score: 166.392 bits (420), Expect = 7.710e-51 Identity = 74/89 (83.15%), Postives = 82/89 (92.13%), Query Frame = 0 Query: 168 YMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRY 256 Y+LKALD +WHEDCLKC CCDCRLGEVGSTL+TK NLILC+RDYLRLFGTTG C+ACSK+IPAFEMVMRAR NVYHL+CFACQ CN R+ Sbjct: 35 YLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRF 123
BLAST of lim domain only protein 3-like isoform x1 vs. SwissProt
Match: gi|34098349|sp|Q99MB5.2|LMO3_RAT (RecName: Full=LIM domain only protein 3; Short=LMO-3; AltName: Full=Neuronal-specific transcription factor DAT1) HSP 1 Score: 166.007 bits (419), Expect = 8.894e-51 Identity = 74/89 (83.15%), Postives = 82/89 (92.13%), Query Frame = 0 Query: 168 YMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRY 256 Y+LKALD +WHEDCLKC CCDCRLGEVGSTL+TK NLILC+RDYLRLFGTTG C+ACSK+IPAFEMVMRAR NVYHL+CFACQ CN R+ Sbjct: 24 YLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRF 112
BLAST of lim domain only protein 3-like isoform x1 vs. SwissProt
Match: gi|82225303|sp|Q9YH16.1|LMO3_XENLA (RecName: Full=LIM domain only protein 3; Short=LMO-3; AltName: Full=LIM domain only protein 1; Short=LMO-1; Short=xLMO1) HSP 1 Score: 163.31 bits (412), Expect = 1.368e-49 Identity = 72/89 (80.90%), Postives = 81/89 (91.01%), Query Frame = 0 Query: 168 YMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRY 256 Y+LKALD +WHEDCLKC CCDCRLGEVGSTL+TK NLILC+RDYLRLFG TG C+ACSK+IPAFEMVMRA+ NVYHL+CFACQ CN R+ Sbjct: 35 YLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKENVYHLDCFACQLCNQRF 123
BLAST of lim domain only protein 3-like isoform x1 vs. SwissProt
Match: gi|82228853|sp|Q503U0.1|LMO3_DANRE (RecName: Full=LIM domain only protein 3; Short=LMO-3) HSP 1 Score: 162.54 bits (410), Expect = 1.633e-49 Identity = 72/89 (80.90%), Postives = 81/89 (91.01%), Query Frame = 0 Query: 168 YMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRY 256 Y+LKALD +WHEDCLKC CCDCRLGEVGSTL+TK NLILC+RDYLRLFG TG C+ACSK+IPAFEMVMRA+ NVYHL+CFACQ CN R+ Sbjct: 24 YLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKENVYHLDCFACQLCNQRF 112
BLAST of lim domain only protein 3-like isoform x1 vs. SwissProt
Match: gi|34098514|sp|Q8BZL8.1|LMO3_MOUSE (RecName: Full=LIM domain only protein 3; Short=LMO-3; AltName: Full=Neuronal-specific transcription factor DAT1 >gi|34098603|sp|Q8TAP4.1|LMO3_HUMAN RecName: Full=LIM domain only protein 3; Short=LMO-3; AltName: Full=Neuronal-specific transcription factor DAT1; AltName: Full=Rhombotin-3 >gi|75070808|sp|Q5RBW7.1|LMO3_PONAB RecName: Full=LIM domain only protein 3; Short=LMO-3 >gi|108860786|sp|Q2KIA3.1|LMO3_BOVIN RecName: Full=LIM domain only protein 3; Short=LMO-3) HSP 1 Score: 162.155 bits (409), Expect = 2.165e-49 Identity = 72/89 (80.90%), Postives = 81/89 (91.01%), Query Frame = 0 Query: 168 YMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRY 256 Y+LKALD +WHEDCLKC CCDCRLGEVGSTL+TK NLILC+RDYLRLFG TG C+ACSK+IPAFEMVMRA+ NVYHL+CFACQ CN R+ Sbjct: 24 YLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRF 112
BLAST of lim domain only protein 3-like isoform x1 vs. SwissProt
Match: gi|82183496|sp|Q6DJ06.1|LMO42_XENTR (RecName: Full=LIM domain transcription factor LMO4.2; AltName: Full=LIM domain only protein 4.2; Short=LMO-4.2) HSP 1 Score: 120.939 bits (302), Expect = 5.086e-33 Identity = 49/88 (55.68%), Postives = 67/88 (76.14%), Query Frame = 0 Query: 168 YMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHR 255 ++L A+D +WH CLKC CC +LGE+G++ +TK +ILC+ DY+RLFG +G CSAC + IPA E+VMRA+ NVYHL+CF C C +R Sbjct: 34 FLLYAMDSYWHSRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDYIRLFGNSGACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNR 121
BLAST of lim domain only protein 3-like isoform x1 vs. nr
Match: gi|939243986|ref|XP_014241320.1| (LIM domain only protein 3-like isoform X1 [Cimex lectularius]) HSP 1 Score: 187.578 bits (475), Expect = 6.005e-56 Identity = 82/91 (90.11%), Postives = 89/91 (97.80%), Query Frame = 0 Query: 166 ATYMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRY 256 + YMLKALD++WHEDCLKCGCCDCRLGEVGSTL+TK NLILC+RDYLRLFG+TGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHR+ Sbjct: 41 SRYMLKALDLYWHEDCLKCGCCDCRLGEVGSTLYTKANLILCRRDYLRLFGSTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRF 131
BLAST of lim domain only protein 3-like isoform x1 vs. nr
Match: gi|939243988|ref|XP_014241321.1| (LIM domain only protein 3-like isoform X2 [Cimex lectularius]) HSP 1 Score: 187.578 bits (475), Expect = 6.281e-56 Identity = 82/89 (92.13%), Postives = 88/89 (98.88%), Query Frame = 0 Query: 168 YMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRY 256 YMLKALD++WHEDCLKCGCCDCRLGEVGSTL+TK NLILC+RDYLRLFG+TGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHR+ Sbjct: 42 YMLKALDLYWHEDCLKCGCCDCRLGEVGSTLYTKANLILCRRDYLRLFGSTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRF 130
BLAST of lim domain only protein 3-like isoform x1 vs. nr
Match: gi|939677353|ref|XP_014284443.1| (PREDICTED: LIM domain only protein 3-like isoform X1 [Halyomorpha halys]) HSP 1 Score: 187.578 bits (475), Expect = 7.720e-56 Identity = 82/89 (92.13%), Postives = 88/89 (98.88%), Query Frame = 0 Query: 168 YMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRY 256 YMLKALD++WHEDCLKCGCCDCRLGEVGSTL+TK NLILC+RDYLRLFG+TGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHR+ Sbjct: 42 YMLKALDLYWHEDCLKCGCCDCRLGEVGSTLYTKANLILCRRDYLRLFGSTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRF 130
BLAST of lim domain only protein 3-like isoform x1 vs. nr
Match: gi|1351640267|ref|XP_024084444.1| (LIM domain only protein 3-like isoform X4 [Cimex lectularius]) HSP 1 Score: 186.422 bits (472), Expect = 1.158e-55 Identity = 82/91 (90.11%), Postives = 89/91 (97.80%), Query Frame = 0 Query: 166 ATYMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRY 256 + YMLKALD++WHEDCLKCGCCDCRLGEVGSTL+TK NLILC+RDYLRLFG+TGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHR+ Sbjct: 20 SRYMLKALDLYWHEDCLKCGCCDCRLGEVGSTLYTKANLILCRRDYLRLFGSTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRF 110
BLAST of lim domain only protein 3-like isoform x1 vs. nr
Match: gi|1351640269|ref|XP_024084445.1| (LIM domain only protein 3-like isoform X5 [Cimex lectularius]) HSP 1 Score: 186.037 bits (471), Expect = 1.224e-55 Identity = 82/89 (92.13%), Postives = 88/89 (98.88%), Query Frame = 0 Query: 168 YMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRY 256 YMLKALD++WHEDCLKCGCCDCRLGEVGSTL+TK NLILC+RDYLRLFG+TGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHR+ Sbjct: 21 YMLKALDLYWHEDCLKCGCCDCRLGEVGSTLYTKANLILCRRDYLRLFGSTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRF 109
BLAST of lim domain only protein 3-like isoform x1 vs. nr
Match: gi|665819591|ref|XP_008558664.1| (PREDICTED: LIM domain only protein 3-like isoform X1 [Microplitis demolitor]) HSP 1 Score: 187.193 bits (474), Expect = 1.263e-55 Identity = 83/89 (93.26%), Postives = 87/89 (97.75%), Query Frame = 0 Query: 168 YMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRY 256 Y+LKALD+FWHEDCLKCGCCDCRLGEVGSTL+TK NLILCKRDYLRLFG TGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHR+ Sbjct: 31 YLLKALDMFWHEDCLKCGCCDCRLGEVGSTLYTKANLILCKRDYLRLFGNTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRF 119
BLAST of lim domain only protein 3-like isoform x1 vs. nr
Match: gi|665819593|ref|XP_008558665.1| (PREDICTED: LIM domain only protein 3-like isoform X2 [Microplitis demolitor]) HSP 1 Score: 186.808 bits (473), Expect = 1.379e-55 Identity = 83/89 (93.26%), Postives = 87/89 (97.75%), Query Frame = 0 Query: 168 YMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRY 256 Y+LKALD+FWHEDCLKCGCCDCRLGEVGSTL+TK NLILCKRDYLRLFG TGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHR+ Sbjct: 31 YLLKALDMFWHEDCLKCGCCDCRLGEVGSTLYTKANLILCKRDYLRLFGNTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRF 119
BLAST of lim domain only protein 3-like isoform x1 vs. nr
Match: gi|1068416543|ref|XP_018053800.1| (PREDICTED: LIM domain only protein 3-like [Atta colombica] >gi|332024562|gb|EGI64760.1| Rhombotin-1 [Acromyrmex echinatior]) HSP 1 Score: 183.726 bits (465), Expect = 1.440e-55 Identity = 82/89 (92.13%), Postives = 87/89 (97.75%), Query Frame = 0 Query: 168 YMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRY 256 Y+LKALD+FWHEDCLKCGCCDCRLGEVGSTL+TK NLILCKRDYLRLFG TG+C+ACSKVIPAFEMVMRARTNVYHLECFACQQCNHRY Sbjct: 31 YLLKALDMFWHEDCLKCGCCDCRLGEVGSTLYTKANLILCKRDYLRLFGNTGHCAACSKVIPAFEMVMRARTNVYHLECFACQQCNHRY 119
BLAST of lim domain only protein 3-like isoform x1 vs. nr
Match: gi|939677355|ref|XP_014284444.1| (PREDICTED: LIM domain only protein 3-like isoform X2 [Halyomorpha halys]) HSP 1 Score: 186.422 bits (472), Expect = 1.492e-55 Identity = 82/89 (92.13%), Postives = 88/89 (98.88%), Query Frame = 0 Query: 168 YMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRY 256 YMLKALD++WHEDCLKCGCCDCRLGEVGSTL+TK NLILC+RDYLRLFG+TGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHR+ Sbjct: 37 YMLKALDLYWHEDCLKCGCCDCRLGEVGSTLYTKANLILCRRDYLRLFGSTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRF 125
BLAST of lim domain only protein 3-like isoform x1 vs. nr
Match: gi|1351640265|ref|XP_024084443.1| (LIM domain only protein 3-like isoform X3 [Cimex lectularius]) HSP 1 Score: 186.037 bits (471), Expect = 2.109e-55 Identity = 82/89 (92.13%), Postives = 88/89 (98.88%), Query Frame = 0 Query: 168 YMLKALDVFWHEDCLKCGCCDCRLGEVGSTLFTKGNLILCKRDYLRLFGTTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRY 256 YMLKALD++WHEDCLKCGCCDCRLGEVGSTL+TK NLILC+RDYLRLFG+TGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHR+ Sbjct: 38 YMLKALDLYWHEDCLKCGCCDCRLGEVGSTLYTKANLILCRRDYLRLFGSTGYCSACSKVIPAFEMVMRARTNVYHLECFACQQCNHRF 126 The following BLAST results are available for this feature:
BLAST of lim domain only protein 3-like isoform x1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 13
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BLAST of lim domain only protein 3-like isoform x1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of lim domain only protein 3-like isoform x1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold921_size81085:49663..56225- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold921_size81085-snap-gene-0.13 ID=maker-scaffold921_size81085-snap-gene-0.13|Name=lim domain only protein 3-like isoform x1|organism=Tigriopus kingsejongensis|type=gene|length=6563bp|location=Sequence derived from alignment at scaffold921_size81085:49663..56225- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'lim domain only protein 3-like isoform x1' has the following synonyms
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