recombinase RecQ, snap_masked-scaffold11234_size2052-processed-gene-0.0 (gene) Tigriopus kingsejongensis

Overview


Name	recombinase RecQ
Unique Name	snap_masked-scaffold11234_size2052-processed-gene-0.0
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of recombinase RecQ vs. L. salmonis genes
Match: EMLSAG00000001573 (supercontig:LSalAtl2s:LSalAtl2s1271:90201:96916:-1 gene:EMLSAG00000001573 transcript:EMLSAT00000001573 description:"maker-LSalAtl2s1271-augustus-gene-0.23")

HSP 1 Score: 270.396 bits (690), Expect = 3.566e-78
Identity = 140/339 (41.30%), Postives = 198/339 (58.41%), Query Frame = 0

Query:   10 KLKEVFGFEDFLDGQEGVMEEILSGRDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMK--NGAYQLVYIAPERFRA-----GSFMSALEGVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISGFERPNLSFTITPVE--KVAQKYTRLKKVLAEHKTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYAD 339
            KLK  FG  DF   Q   +   L   D  V+MPTGGGKSLCYQLPA  + GVT+V+SPL++L+ DQV  L   G+    + S   +G Q++  + ++       L+Y+ PE+  A     G F S      +    IDEAHC+SQWGHDFRPDY  L K          +ALTATATP VR DI   L ++ P   +S F R NL + + P +   + +    + +     ++GI+YC +RK+ ++ AE + + G+  ++YH G+ D ER R Q+ +I  K  +  AT AFGMGID+ DVR+V+H+ +P S+E YYQE+GRAGRDG  + C L ++Y D
Sbjct:  563 KLKSKFGIRDFRPNQLPAVNAALLNHDTFVLMPTGGGKSLCYQLPASIQGGVTVVISPLVSLIYDQVSKLNGLGIPADHL-SGDDYGRQRKIYDKLRLLTPGLTLLYVTPEKISASNELNGVFSSLYSRKLLNRFVIDEAHCVSQWGHDFRPDYKLLHKLRSVYPEVPFMALTATATPRVRTDILHQLNMKSPKWFLSSFNRQNLIYEVKPKKGKSITKDIVSMIQKDWMRQSGIIYCLSRKECDKTAEDLTASGIKALSYHAGLKDSERSRVQDQWIKDKVKVVCATIAFGMGIDKPDVRYVMHYSLPKSIEGYYQESGRAGRDGRPSNCILFYSYGD 900

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BLAST of recombinase RecQ vs. L. salmonis genes
Match: EMLSAG00000003002 (supercontig:LSalAtl2s:LSalAtl2s170:674355:677674:-1 gene:EMLSAG00000003002 transcript:EMLSAT00000003002 description:"maker-LSalAtl2s170-snap-gene-6.11")

HSP 1 Score: 249.98 bits (637), Expect = 2.175e-72
Identity = 135/351 (38.46%), Postives = 197/351 (56.13%), Query Frame = 0

Query:   11 LKEVFGFEDFLDGQEGVMEEIL-SGRDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMKNGAYQLVYIAPERFRAG-SFMSALEGVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISGFERPNLSFTITPVEKVAQKYTRL------KKVLAEHKTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYADTRTQEFFIDGVNPG 353
            L   FG+  F   Q  ++  +L    D  VVM TG GKSLCYQ PA+    VTLV+SPLI+LM+DQV  L    +  T + S  +     + +  +K   Y++VY+ PE        +S L   ++ +VA+DEAHC+SQWGHDFR  Y +LG       N   + LTATATP V+ DI K L L +P   ++ F+RPNL   +     + +  + L      +  +  H + I+YC TRK+VE+V + + S  ++ + YH G+S + R++    FI  +  + V T AFGMGID+SDVR VVH+  P  +E+YYQE GRAGRDG ++   + ++  D     FF+  +  G
Sbjct:   49 LSSSFGYSAFRPVQWNIISRVLCDAGDSLVVMATGYGKSLCYQFPAVYSGKVTLVISPLISLMEDQVAKLRVSNIPSTFLGSGQTM--MPDTMSNIKENKYRVVYVTPEYVDTSLDTLSKLLKDRLVLVAVDEAHCVSQWGHDFRSSYRKLGILKQTFPNVPIMGLTATATPEVQKDISKSLSLINPSYFVTSFDRPNLFIEVKSKVAIWRDLSLLMTKENGEDWVFPHGSTIIYCPTRKEVEKVGDVLTSNSVNHLLYHAGLSPKVRKKNHEDFIFDRCSLVVCTVAFGMGIDKSDVRLVVHYGAPRDMESYYQEIGRAGRDGMSSRVRVYYSTTDFSVHRFFLSDMENG 397

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BLAST of recombinase RecQ vs. L. salmonis genes
Match: EMLSAG00000001574 (supercontig:LSalAtl2s:LSalAtl2s1271:98605:106214:1 gene:EMLSAG00000001574 transcript:EMLSAT00000001574 description:"maker-LSalAtl2s1271-augustus-gene-0.21")

HSP 1 Score: 194.897 bits (494), Expect = 1.402e-52
Identity = 120/352 (34.09%), Postives = 175/352 (49.72%), Query Frame = 0

Query:    5 DRARAKLKEVFGFEDFLDGQE-----GVMEEILSGRDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMKNGAYQLVYIAPERFRAGSFMSALEG-VKIEMV---AIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLR-DPFENISGFERPNLSFTITPVEKVAQKYTRLKKVLAE---------------HKTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFC 331
            DR    L   FG   F   ++      ++EE    RD  V MPTG GKSL Y LP              + L K ++  +E + V   +                 K    + +Y+ PE+    +F S LE  VK  ++    IDEAHC+SQWGHDFRPDY++LG+    +   + +ALTATA+  V  D+ K LK++ +P        R NL + +   E +  +Y  LK  + E                  GI+YC TR    ++A  +   G+  +AYHGG+ D ER R Q ++   K  +  AT +FGMG+D++ VRFV H+ +P ++  YYQE+GRAGRDG+ +FC
Sbjct:   10 DRIEQALNSFFGHPSFRSKEQEAAIRAIVEEEDCERDVFVSMPTGSGKSLVYXLPG-------------VLLPKGRITIVERKRVLRDI---------------HAKCPDTRFLYVTPEQCATNTFKSILEKLVKFNVLGYFVIDEAHCVSQWGHDFRPDYLKLGQLRKIINKTRVLALTATASKEVAADVFKQLKMKKEPLVFKVPCFRSNLFYDVVFKESIQYEYEDLKGFVLECLGEGVLKKSTLGKNAPCGIIYCRTRDGTLQIASQLTKRGIPTLAYHGGLKDSERSRVQESWADGKVPVIAATISFGMGVDKATVRFVAHWSVPQTIAGYYQESGRAGRDGKPSFC 333

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BLAST of recombinase RecQ vs. L. salmonis genes
Match: EMLSAG00000001248 (supercontig:LSalAtl2s:LSalAtl2s1202:153682:156705:1 gene:EMLSAG00000001248 transcript:EMLSAT00000001248 description:"snap_masked-LSalAtl2s1202-processed-gene-0.15")

HSP 1 Score: 187.193 bits (474), Expect = 3.214e-50
Identity = 126/347 (36.31%), Postives = 191/347 (55.04%), Query Frame = 0

Query:   15 FGFEDFLDGQEGVMEEILSGRDGSVVMPTGGGKSLCYQLPA--LCREG--VTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMKNGAYQLVYIAPERFRAGSFMSALEGVK-----IEMVAIDEAHCLSQWGHDFRPDYMRLGKAL-DAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISG-FERPNLSFTITPVEKVAQKYTRLKKVLAEHK-----TGIVYCATRKKVEEVAETI-------HSWGMSCIA--YHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFN 336
            FG  +F  GQ+  +  IL G    VV+ TG GKSL YQ+PA  L +E   +T+VVSPL++LM+DQ+  +    +   L +S L   +  +  +G++     ++++ PE     +  S L+ +K     +  V IDEAHC+SQW H+FRP Y +LG A+ +++     + L ATAT      I + L++      I G   R NL   +  V K  ++   L ++L   K     + I+YC  R++ E VA  I       +S   + IA  +H G+S  +R+R  N FIS K  I VAT AFGMGI++SD+R VVH+ +P ++E+Y QE GRAGRD   ++C L  +
Sbjct:  268 FGHSEFRRGQKEAIFRILRGEXTLVVLSTGSGKSLIYQIPAYLLAKEDSRLTIVVSPLVSLMEDQLRNMPTL-IQADLFHSDLGRTQLVKIKDGLRENKLAILFMTPE-----TLFSQLKTLKEFIPRLGFVCIDEAHCMSQWSHNFRPAYFQLGGAIRESLKATTILGLXATATEKTITTIAERLQVDSEGGIIKGTVLRKNL---LMSVSKDFRRDEALIEMLNSEKFSALGSIIIYCTRREECERVAAIIRTRRRGENSSKNNIIASSFHAGLSHAKRKRIYNDFISGKLKIIVATIAFGMGINKSDIRGVVHYNMPSTLESYVQEIGRAGRDENESYCHLFMD 605

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BLAST of recombinase RecQ vs. L. salmonis genes
Match: EMLSAG00000010143 (supercontig:LSalAtl2s:LSalAtl2s66:712270:714003:-1 gene:EMLSAG00000010143 transcript:EMLSAT00000010143 description:"augustus_masked-LSalAtl2s66-processed-gene-7.1")

HSP 1 Score: 82.0333 bits (201), Expect = 1.335e-16
Identity = 88/340 (25.88%), Postives = 144/340 (42.35%), Query Frame = 0

Query:   31 ILSGRDGSVVMPTGGGKSLCYQLPALC-----------REGV-TLVVSP---LIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMKNGAYQLVYIAPERFRAGSFMSALEGVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFE-NISGFERP---NLSFTITPVEKVAQKYTRLKKV---LAEHKTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYADTRTQEFFID 348
            +L G D   +  TG GK+L + LP+             R G   LV+SP   L   + D+V   E RG+    +      G++K +++ +  G  Q+V   P R         +    I  + +DEA  +   G  F P   ++   LD   + Q V  +AT  P VR      +K  DP   +I   +     +++  I  VE   +K  RL      +      I++ + + KV++ + ++   G+ C + HGG    +RE+    F      I +AT+    GID  D+  V++F+ P S+E Y    GR+GR G+         Y D    +  ID
Sbjct:   23 LLKGLDLIGIAQTGTGKTLAFLLPSFIHIDSQSIPREKRGGPNVLVLSPTRELALQIADEVKKYEYRGIKSVCVYGG---GDRKAQVKVVTQGV-QIVIATPGRLNDLIESGCIAVESITYLVLDEADRMLDMG--FEPQIRKI--LLDVRPDRQTVMTSATWPPGVRRLASNYMK--DPITVSIGSLDLAAVHSVTQKIFVVESEEEKDDRLLDFFNNMTPEDKAIIFMSKKAKVDDYSSSLCLAGVDCQSIHGGRDQMDREQALLDFKLGHVRILIATDVASRGIDVEDISHVINFDFPNSMEEYVHRIGRSGRAGKKGSSISFMTYRDRPLAQGLID 352

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BLAST of recombinase RecQ vs. L. salmonis genes
Match: EMLSAG00000004918 (supercontig:LSalAtl2s:LSalAtl2s259:1039310:1040989:-1 gene:EMLSAG00000004918 transcript:EMLSAT00000004918 description:"maker-LSalAtl2s259-augustus-gene-10.16")

HSP 1 Score: 78.1814 bits (191), Expect = 2.238e-15
Identity = 82/335 (24.48%), Postives = 143/335 (42.69%), Query Frame = 0

Query:   31 ILSGRDGSVVMPTGGGKSLCYQLPALCR---------EGVT-----LVVSPLIAL-MKDQVDALEERGVAVTLINSTLSWGEQK-ERLEGMKNGAYQLVYIAPERFRAGSFMSALEGVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLK--LRDPFENISGFERPNLSFTITPVEKVAQKYTR-------LKKVLAEHKTGIVYCATRKKVEEVAETI-HSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYAD 339
            + SGRD   +  TG GK+L + +PAL           +GV      L+V+P   L M+ QV  LE  G  +   +  +  G  K  + + +K+G  +++   P R    +    ++   +  V +DEA  +   G  F  D  R+      +G       T   +    D IRK+    L+ P +   G E      T+T + +V  + +R       L K   +    +++   +++ + +  ++ H W  +C   HG  S   R +    F S K  I +AT+    G+D  DV +V+++  P ++E Y    GR GR G++      F+  D
Sbjct:  142 VASGRDVIGIAETGSGKTLAFSVPALAHISERKQRPVKGVNSMPIMLIVAPTRELAMQSQV-VLESAGKEIGFKSLCVYGGVNKYAQRQSLKSGV-EILVATPGRLLDLAEEGCVDLSGVSYVVLDEADRMLDQG--FEQDIRRI------LGQTHKERQTCLFSATWPDSIRKLAHEFLKSPIKVTIGSEDLAAGKTVTQIVEVVDERSRDGKIKGLLNKYHKKKNRILIFVLYKREADRLWNSLKHEW--NCTTIHGDKSQDARIQAVENFKSGKIPILIATDVAARGLDIPDVEYVLNYSFPLTIEDYVHRIGRTGRAGKSGIAHTFFHLGD 464

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BLAST of recombinase RecQ vs. L. salmonis genes
Match: EMLSAG00000000249 (supercontig:LSalAtl2s:LSalAtl2s1036:82728:88820:1 gene:EMLSAG00000000249 transcript:EMLSAT00000000249 description:"maker-LSalAtl2s1036-augustus-gene-0.32")

HSP 1 Score: 75.8702 bits (185), Expect = 8.906e-15
Identity = 82/345 (23.77%), Postives = 139/345 (40.29%), Query Frame = 0

Query:   16 GFEDFLDGQEGVMEEILSGRDGSVVMPTGGGKSLCYQLPAL--------CREGVTLVVSPLIALMKDQV--DALEERGVAVTLINSTLSWGEQKERLEGMKNGAYQLVYIAPERFRAGSFMSALEGVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISGFERPNLSFTITPVEKVAQKYTRLKKVLAEH-----------KTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYAD 339
            G+E     QE  +   LSGRD       G GK+  Y +P L          +G+ +V +  +AL   Q+  +  + R V V +     +  E   R+         LV   P R          + +  +++ +DEA  L   GHDF+     L + ++ +   + + L +   P+  +   K   ++ P+E        NL   +T ++ + Q Y  +++    H              I++C + ++VE +A+ I   G SC   H  M+   R R  + F +      V ++ F  GID   V  V++F+ P   E Y    GR+GR G       L  Y D
Sbjct:   70 GWEKPSPIQEASIPVALSGRDILARAKNGTGKTGAYSIPILEQIDPSNDVIQGMIIVPTRELALQTSQICIELSKHRNVKVMVTTGGTNLKEDIMRI----YEKVHLVVATPGRILDLIEKGVAKVMNCKVICLDEADKL--LGHDFKG---MLDRLIEHLPERRQILLXSATFPLTVEYFMK-RHMKSPYE-------VNLMDELT-LKGITQYYAFVQERQKVHCLNTLFTKLQINQSIIFCNSTQRVELLAKKITELGYSCYYIHAKMAQTHRNRVFHDFRAGLCRNLVCSDLFTRGIDIQAVNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYDD 396

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BLAST of recombinase RecQ vs. L. salmonis genes
Match: EMLSAG00000007141 (supercontig:LSalAtl2s:LSalAtl2s402:374905:376772:1 gene:EMLSAG00000007141 transcript:EMLSAT00000007141 description:"maker-LSalAtl2s402-augustus-gene-4.12")

HSP 1 Score: 67.0106 bits (162), Expect = 4.379e-12
Identity = 82/373 (21.98%), Postives = 149/373 (39.95%), Query Frame = 0

Query:   15 FGFEDFLDGQEGVMEEILSGRDGSVVMPTGGGKSLCYQLPAL------CREGVTLVVSPLIALMKDQVDALEERGVAVTL-INSTLSWGEQKERLEGMKNGAYQLVYIAPERFRAGSFMSALEGVKIEMVAIDEAHCLSQWG--------HDFRPDYMRLGKALDAMGNPQCVALTA--TATPIVRDDIRKVLKLRDPFENISGFERPNLSFTITPVEKVAQKYTRLKKVLAEHKTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYADTRTQEFFIDGVNPGAGMIRDVYQFFLNEADE 370
            +GFE     Q+  ++ IL GRD      +G GK+  + +  L       RE   LV+SP   L       L   G  + +  ++ +      E +  +  G + +V   P R         L    I+M+ +DEA  +   G        + + P + ++   + A    + + +T+   A PI     R  L L    +     ER    F     + +   Y  L    A     +++C T++KV+ + E +     +  + HG M  +ER+     F S ++ + + T+ +  GID   V  V+++++P + E Y    GR+GR G         N+             N    ++RD+ Q++  + DE
Sbjct:   46 YGFEKPSAIQQRSIKPILKGRDVIAQAQSGTGKTATFSISILQSIDTTMRETQCLVLSPTRELAVQIQKVLLALGDYMNVQCHACIGGTNLGEDIRKLDYGQH-VVSGTPGRVYDMIRRRTLRTRGIKMLVLDEADEMLNKGFKEQIYDVYRYLPPFTQIA-LISATLPHEILEMTSKFMADPIRILVKRDELTLEGXKQFFVAVEREEWKF-----DTLCDLYDTLTITQA-----VIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDAIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVA---INFVK-----------NDDIRILRDIEQYYSTQIDE 392

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BLAST of recombinase RecQ vs. L. salmonis genes
Match: EMLSAG00000002581 (supercontig:LSalAtl2s:LSalAtl2s151:1305107:1306803:-1 gene:EMLSAG00000002581 transcript:EMLSAT00000002581 description:"maker-LSalAtl2s151-snap-gene-13.39")

HSP 1 Score: 67.3958 bits (163), Expect = 5.110e-12
Identity = 70/325 (21.54%), Postives = 141/325 (43.38%), Query Frame = 0

Query:   33 SGRDGSVVMPTGGGKSLCYQLPALCR-----------EG-VTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKE-RLEGMKNGAYQLVYIAPERFRAGSFMSALEGVKIEM-----VAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISGFERPNLSFTITPVEKVA----------QKYTRLKKVL-----AEHKTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGR 324
            +G++   +  TG GK+L + LP LC            +G V L+++P   L +   + ++  G A  +  + L  G  K+ ++  +  GA ++V   P     G  +  +E   +++     + +DEA  +   G  F P   ++ + +    + Q +  +AT          +V  L   F   + +   N+  +     K+           +K   +K++L      E K  +++ AT+ +V+++   +  W       HG  +   R R  + F S + +I VAT+    G+D +D++ V++++ P ++E Y    GR GR
Sbjct:  114 NGKNIIAIGETGSGKTLGFVLPGLCHLMRXPPRRNRGDGPVVLIIAPTRELAEQIHNVVD--GFASKIPTACLVGGNHKQGQIRDLNRGA-EIVVATP-----GRLIDLMEDGDVDLKRCSYMVLDEADRMLDMG--FEPQIRKIMRQVRP--DRQLLMWSATWP-------SEVQSLAHDFFGGTDYAHVNIGSSELXANKLIMQDFKFCERFEKMDSIKEILESLSEVESKKVLIFAATKIRVDQLVRKLKYWNFVVDGIHGDKTQAMRTRALDKFRSGRINILVATDVASRGLDVNDIKVVINYDFPNNIEDYVHRIGRTGR 419

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BLAST of recombinase RecQ vs. L. salmonis genes
Match: EMLSAG00000011189 (supercontig:LSalAtl2s:LSalAtl2s760:470421:474651:1 gene:EMLSAG00000011189 transcript:EMLSAT00000011189 description:"maker-LSalAtl2s760-augustus-gene-3.33")

HSP 1 Score: 67.0106 bits (162), Expect = 1.034e-11
Identity = 83/344 (24.13%), Postives = 143/344 (41.57%), Query Frame = 0

Query:   32 LSGRDGSVVMPTGGGKSLCYQLPALCR--------EG---VTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWG--EQKERLEGMKNGAYQLVYIAPERFRAGSFMSALEGVKIEM-----VAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENIS-GFERPNLSFTITPVEKVA---QKYTRLKKVLAE-----HKTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYADTRTQEFFID 348
            LSG +   +  TG GK+  Y LP +          EG   + LV++P   L +   +   E G   + I ST  +G   +  +L  ++ G  ++V   P     G  +  LE  KI M     + +DEA  +   G  F P   ++ + +    + Q +  +AT    VR   R      D + +I+ G    + +  I  +  V    QK  +L ++L E     H   +++  T++K +E+   +   G   +  HG    +ER+     F      I  AT+    G+D  DV+FV++++ P + E Y    GR GR         LF   ++   +  +D
Sbjct:  150 LSGSNMVGIAMTGSGKTCGYLLPGIIHVNNQPYLEEGDGPIVLVLAPTRELAQQIQEVASEFG-RTSRIKSTCIFGGAPKGPQLRDLERGC-EIVIATP-----GRLIDILEMGKINMRRCTYLVLDEADRMLDMG--FEPQIRKIIEQIRP--DRQVLMWSATWPKEVR---RLAEDFLDDYVHINIGAATLHANHNILQIVDVCEDFQKEEKLARLLEEIGCEPHNKILIFVETKRKADELTRLMRRDGYPAMCIHGDKQQKERDWVLGEFKHGATTILXATDVAARGLDVDDVKFVINYDYPNNSEDYIHRIGRTGRKDRTGTAYTLFTSGNSAKAKDLVD 479

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BLAST of recombinase RecQ vs. SwissProt
Match: gi|81342384|sp|O34748.1|RECQ_BACSU (RecName: Full=Probable ATP-dependent DNA helicase RecQ)

HSP 1 Score: 324.324 bits (830), Expect = 2.086e-101
Identity = 165/350 (47.14%), Postives = 226/350 (64.57%), Query Frame = 0

Query:    4 IDRARAKLKEVFGFEDFLDGQEGVMEEILSGRDGSV-VMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMKNGAYQLVYIAPERFRAGSFMSALEGVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGN-PQCVALTATATPIVRDDIRKVLKLRDPFENISGFERPNLSFTITPVE---KVAQKYTRLKKVLAEHKTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYADTRTQEFFID 348
            + RA++ L   FG+E F  GQ+  +  +   R  +  +MPTGGGKS+CYQ+PAL  EG T+V+SPLI+LMKDQVDALEE G+    INST S  E  ERL G+K GAY+L YI PER  +  F+  L+G+ + +VAIDEAHC+SQWGHDFRP Y  +      + + P  +ALTATATP V DDI K L ++      +GF R NL+F +   E   +   +Y +  +    H+ GIVY ATRK+ + + E +    +    YHGG++D  R+  Q  F++ +  + VAT+AFGMGID+S++RFV+H +IP  +E+YYQEAGRAGRDG A+ C LLF+  D   Q F I+
Sbjct:    2 LHRAQSLLAHYFGYEKFRSGQDEAIRLVTEARQNTACIMPTGGGKSICYQIPALMFEGTTIVISPLISLMKDQVDALEEAGINAAYINSTQSNQEIYERLNGLKEGAYKLFYITPERLTSIEFIRILQGIDVPLVAIDEAHCISQWGHDFRPSYRNIEILFRELHDKPVIMALTATATPEVHDDICKQLHIQKENTVYTGFSRENLTFKVVKGENKDRFIDEYVQNNR----HEAGIVYTATRKEADRIYERLKRNQVRAGRYHGGLADDVRKEQQERFLNDELQVMVATSAFGMGIDKSNIRFVLHAQIPKDMESYYQEAGRAGRDGLASECVLLFSPQDIMVQRFLIE 347

HSP 2 Score: 100.523 bits (249), Expect = 6.964e-21
Identity = 69/241 (28.63%), Postives = 119/241 (49.38%), Query Frame = 0

Query:  413 GSRSKGTRLLRPE-VLSRDLVLDEAALLEKERRDREKLEKMVQLCYANTCRQQWILEYFGEEDAPVCGSCDVCRGEENSERRAPSDEEDLNVRKFLSGVARMSRRTATGWQGIYGRGRIIQMLVGSKSQEVLRVRLHELKTYGLLKEQGTAYLNALARSLNDGGLIVTQMGEYPLVTLTPRGEQAMKGKTSYALEWPSKEGAARPEGEEAALKDLGFDGRLYDRLKDVRTRLAKGEQVPAY 652
            G  S+   L  P+ ++ +  +++++   EK+++D +KL +MV  C+   C Q++IL YFGE++   CG C  C     ++ RA  D      +  LS + RM  R        +G+  + Q+L GSK+++VL     +L TYG+LK Q    ++     L     I    G +P + ++ +G   +KG+ S A +   K  AA  E +E           L++RL+ VR  +A  + VP +
Sbjct:  325 GLASECVLLFSPQDIMVQRFLIEQSEHEEKQKQDLKKLRQMVDYCHTEDCLQRFILMYFGEKEPDACGQCGNC-----TDTRAAHDVTR-EAQMVLSCIIRMKER--------FGKTMVAQVLAGSKNKKVLENGFSDLSTYGILKHQSVGEISDFIEFLISDDFIRMSDGTFPTLFVSSKGRNVLKGELSVARKEALK-AAAITENDE-----------LFERLRMVRKEIAAEQGVPPF 539

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BLAST of recombinase RecQ vs. SwissProt
Match: gi|54041622|sp|P15043.5|RECQ_ECOLI (RecName: Full=ATP-dependent DNA helicase RecQ)

HSP 1 Score: 318.931 bits (816), Expect = 4.135e-99
Identity = 162/335 (48.36%), Postives = 219/335 (65.37%), Query Frame = 0

Query:    7 ARAKLKEVFGFEDFLDGQEGVMEEILSGRDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMKNGAYQLVYIAPERFRAGSFMSALEGVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISGFERPNLSFTITPVEKVAQKYTRLKKVLAEH--KTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYAD 339
            A+  L+E FG++ F  GQE +++ +LSGRD  VVMPTGGGKSLCYQ+PAL   G+T+VVSPLI+LMKDQVD L+  GVA   +NST +  +Q E + G + G  +L+YIAPER    +F+  L      ++A+DEAHC+SQWGHDFRP+Y  LG+          +ALTATA    R DI ++L L DP   IS F+RPN+ + +  +EK  +   +L + + E   K+GI+YC +R KVE+ A  + S G+S  AYH G+ +  R   Q  F      I VAT AFGMGI++ +VRFVVHF+IP ++E+YYQE GRAGRDG  A   L ++ AD
Sbjct:   13 AKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYML--MEKF-KPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPAD 344

HSP 2 Score: 78.9518 bits (193), Expect = 5.039e-14
Identity = 52/210 (24.76%), Postives = 102/210 (48.57%), Query Frame = 0

Query:  445 DREKLEKMVQLCYANTCRQQWILEYFGEEDAPVCGSCDVCRGEENSERRAPSDEED--LNVRKFLSGVARMSRRTATGWQGIYGRGRIIQMLVGSKSQEVLRVRLHELKTYGLLKEQGTAYLNALARSLNDGGLIVTQMGEYPLVTLTPRGEQAMKGKTSYALEWPSKEGAARPEGEEAALKDLGFDGRLYDRLKDVRTRLAKGEQVPAY 652
            +R KL  M     A TCR+  +L YFGE     CG+CD+C          P  + D   + +  LS + R+++R        +G G +++++ G+ +Q +      +LK YG+ +++   +  ++ R L   GL+   + ++  + LT      ++G++S  L  P +  A +P+  + +     +D +L+ +L+ +R  +A    VP Y
Sbjct:  364 ERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLD--------PPKQYDGSTDAQIALSTIGRVNQR--------FGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHSALQLTEAARPVLRGESSLQLAVP-RIVALKPKAMQKSFGG-NYDRKLFAKLRKLRKSIADESNVPPY 555

[Close]

BLAST of recombinase RecQ vs. SwissProt
Match: gi|18202817|sp|Q9CL21.1|RECQ_PASMU (RecName: Full=ATP-dependent DNA helicase RecQ)

HSP 1 Score: 318.931 bits (816), Expect = 5.974e-99
Identity = 159/347 (45.82%), Postives = 220/347 (63.40%), Query Frame = 0

Query:    2 SAIDRARAKLKE--------VFGFEDFLDGQEGVMEEILSGRDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMKNGAYQLVYIAPERFRAGSFMSALEGVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISGFERPNLSFTITPVEKVAQKYTRLKKVLAEH-KTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYAD 339
            SA+D     LK+        VFG++ F  GQE V++  L G+D  V+M TG GKSLCYQ+PALC EG+TLV+SPLI+LMKDQVD L   G+    +NS+ ++ EQ++    + +G  +L+Y++PE+    SF   +   K+  VAIDEAHC+SQWGHDFRP+Y +LG       +   +ALTATA    R DI + L L+ P   I  F+RPN+ +T+  VEK        + VL +  K+GI+YC +R KVE +AE++ + G+S  AYH G+   +RE+ Q  F      + VAT AFGMGI++S+VRFVVHF++P S+E+YYQE GRAGRD   A   L +  AD
Sbjct:   13 SAVDFHEIPLKQTALDVLHAVFGYQSFRKGQEEVIDATLMGKDSLVIMATGNGKSLCYQIPALCFEGLTLVISPLISLMKDQVDQLLANGIEADYLNSSQTFTEQQQVQNKLMSGTLKLLYVSPEKVMTTSFFHLISHCKVSFVAIDEAHCISQWGHDFRPEYTQLGGLKSCFPHAPIMALTATADHATRQDILRHLNLQSPHVYIGSFDRPNIRYTL--VEKFKPMEQLCRFVLGQKGKSGIIYCNSRSKVERIAESLRNKGVSAQAYHAGLETSQREQVQRAFQRDNVQVVVATIAFGMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPAD 357

HSP 2 Score: 68.9366 bits (167), Expect = 6.205e-11
Identity = 57/226 (25.22%), Postives = 103/226 (45.58%), Query Frame = 0

Query:  438 LLEK-ERRDRE----KLEKMVQLCYANTCRQQWILEYFGEEDAPVCGSCDVCRGEENSERRAPSDEED--LNVRKFLSGVARMSRRTATGWQGIYGRGRIIQMLVGSKSQEVLRVRLHELKTYGLLKEQGTAYLNALARSLNDGGLIVTQMGEY-PLVTLTPRGEQAMKGKTSYALEWP---SKEGAARPEGEEAALKDLGFDGRLYDRLKDVRTRLAKGEQVPAY 652
            LLEK E   R+    KL+ + +   + TCR+  +L YFGE     C +CD+C          P  + D  ++ +K +S + R+ +R        +G   +I +L G  +Q++   +  +L  YG+ K++   +  ++ R L   G I      +   + LT   +  ++G+   +L  P   S      P+    A     +D  L+ RL+ +R ++A  E +PAY
Sbjct:  365 LLEKPESPQRQIEALKLQAIGEFAESQTCRRLVLLNYFGEHQQKPCQNCDICLD--------PPKQYDGLIDAQKVMSTIYRIGQR--------FGVHYVIAVLRGLSNQKIKDNQHEQLSVYGIGKDKSKEHWQSVIRQLIHLGFIKQVFDHFNATLQLTENAKPILRGEQPLSLAMPRISSLTSVVAPQRYAIA----QYDKDLFARLRFLRKQIADKENIPAY 570

[Close]

BLAST of recombinase RecQ vs. SwissProt
Match: gi|19859341|sp|P40724.3|RECQ_SALTY (RecName: Full=ATP-dependent DNA helicase RecQ)

HSP 1 Score: 315.464 bits (807), Expect = 7.303e-98
Identity = 163/335 (48.66%), Postives = 218/335 (65.07%), Query Frame = 0

Query:    7 ARAKLKEVFGFEDFLDGQEGVMEEILSGRDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMKNGAYQLVYIAPERFRAGSFMSALEGVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISGFERPNLSFTITPVEKVAQKYTRLKKVLAEH--KTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYAD 339
            A+  L+E FG++ F  GQE +++  LSGRD  VVMPTGGGKSLCYQ+PAL  +G+T+VVSPLI+LMKDQVD L   GVA   +NST S  +Q E + G + G  +L+YIAPER    +F+  L      ++A+DEAHC+SQWGHDFRP+Y  LG+          +ALTATA    R DI ++L L DP   IS F+RPN+ + +  +EK  +   +L + + E   K+GI+YC +R KVE+ A  + S G+S  AYH G+ +  R   Q  F      I VAT AFGMGI++ +VRFVVHF+IP ++E+YYQE GRAGRDG  A   L ++ AD
Sbjct:   13 AKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQIRLLYIAPERLMLDNFLDHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYML--MEKF-KPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRVDVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPAD 344

HSP 2 Score: 79.7221 bits (195), Expect = 2.937e-14
Identity = 53/209 (25.36%), Postives = 100/209 (47.85%), Query Frame = 0

Query:  445 DREKLEKMVQLCYANTCRQQWILEYFGEEDAPVCGSCDVCRGEENSERRAPSDEEDLNVRKF-LSGVARMSRRTATGWQGIYGRGRIIQMLVGSKSQEVLRVRLHELKTYGLLKEQGTAYLNALARSLNDGGLIVTQMGEYPLVTLTPRGEQAMKGKTSYALEWPSKEGAARPEGEEAALKDLGFDGRLYDRLKDVRTRLAKGEQVPAY 652
            +R KL  M     A TCR+  +L YFGE     CG+CD+C          P   + LN  +  LS + R+++R        +G G +++++ G+ +Q +      +LK YG+ +E+   +  ++ R L   GL++  + ++  + LT      ++G     L  P +  A +P   + +     +D +L+ +L+ +R  +A  E +P Y
Sbjct:  364 ERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLD-------PPKQYDGLNDAQIALSTIGRVNQR--------FGMGYVVEVIRGANNQRIRDFGHDKLKVYGMGREKSHEHWVSVIRQLIHLGLVMQNIAQHSALQLTDAARPVLRGDVPLKLAVP-RIVALKPRVMQKSFGG-NYDRKLFAKLRKLRKAIADEENIPPY 555

[Close]

BLAST of recombinase RecQ vs. SwissProt
Match: gi|2500112|sp|P71359.1|RECQ_HAEIN (RecName: Full=ATP-dependent DNA helicase RecQ)

HSP 1 Score: 311.997 bits (798), Expect = 2.243e-96
Identity = 155/334 (46.41%), Postives = 219/334 (65.57%), Query Frame = 0

Query:    7 ARAKLKEVFGFEDFLDGQEGVMEEILSGRDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMKNGAYQLVYIAPERFRAGSFMSALEGVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISGFERPNLSFTITPVEKVAQKYTRLKKVLAEH-KTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYAD 339
            A + LK VFG++ F  GQE V+   L+G+D  VVM TG GKSLCYQ+PALC +G+TLV+SPLI+LMKDQVD L+  G+    +NS+ +  +Q++    + +G  +L+Y++PE+    SF   +   K+  +AIDEAHC+SQWGHDFRP+Y +LG    +  +   +ALTATA    + DI + L L++  + I  F+RPN+ +T+    K  ++ TR   VLA+  K+GI+YC +R KVE +AE++ + G+S  AYH GM    RER Q  F      + VAT AFGMGI++S+VRFV HF++P S+E+YYQE GRAGRD   A   L +  AD
Sbjct:   16 ALSVLKSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISLMKDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISGQLKLLYVSPEKVMTNSFFQLISYSKVCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQDILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKPMEQLTRF--VLAQKGKSGIIYCNSRNKVERIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPAD 347

HSP 2 Score: 76.2554 bits (186), Expect = 3.532e-13
Identity = 50/211 (23.70%), Postives = 97/211 (45.97%), Query Frame = 0

Query:  445 DREKLEKMVQLCYANTCRQQWILEYFGEEDAPVCGSCDVCRGEENSERRAPSDEED--LNVRKFLSGVARMSRRTATGWQGIYGRGRIIQMLVGSKSQEVLRVRLHELKTYGLLKEQGTAYLNALARSLNDGGLIVTQMGEY-PLVTLTPRGEQAMKGKTSYALEWPSKEGAARPEGEEAALKDLGFDGRLYDRLKDVRTRLAKGEQVPAY 652
            ++ KLE + +   + TCR+  +L YFGE     C +CD+C          P  + D  ++ +K +S + R+ +         +G   +I +L G  +Q+++  + H+L  YG+ K++   +  ++ R L   G +   + E  P + LT   +  +KG+    L  P     ++            +D  L+ RL+ +R ++A  E +P Y
Sbjct:  367 EQHKLEAIGEFAESQTCRRLVLLNYFGEHRQTPCNNCDICLD--------PPKKYDGLVDAQKVMSTIYRVGQ--------CFGAHYVIAVLRGMHNQKIIERQHHKLSVYGIGKDKSKEHWQSVIRQLIHLGFVQQVISELNPTLQLTESAKVILKGEEPLELAMPRISAISKIAHNPQRQGVANYDKDLFARLRFLRKQIADKENIPPY 561

[Close]

BLAST of recombinase RecQ vs. SwissProt
Match: gi|1710074|sp|P50729.1|RECS_BACSU (RecName: Full=Probable ATP-dependent DNA helicase RecS; AltName: Full=Recombination protein S)

HSP 1 Score: 288.115 bits (736), Expect = 1.189e-88
Identity = 179/520 (34.42%), Postives = 274/520 (52.69%), Query Frame = 0

Query:    4 IDRARAKLKEVFGFEDFLDGQEGVMEEILSGRDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVA-VTLINSTLSWGEQKERLEGMKNGAYQLVYIAPERFRAGSFMSALEGVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISGFERPNLSFTITPVEKVAQKYTRLKKVLAEHK-TGIVYCATRKKVEEVAETIHSWGMS-CIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYADTRTQEFFIDGVNPGAGMIRDVYQFFLNEADENYEVHRTLDEIKE-GIGAKNGMAIGAALGALMRGRWVERFDIAGSRSKGTRLLRPEVLSR-DLVLDEAALLEKERRDREKLEKMVQLCYANTCRQQWILEYFGEE------DAPVCGSC--DVCRGEENSERR--APSDEEDLNVRKFLS 508
            + + +  L + FGF  F  GQ+ ++E ILSG+D   ++PTGGGKSLCYQLP    +G+ L+VSPL++LM+DQV  L+ RG      +NS L+  E++  LE +    Y+ +Y++PE  ++   +  L+ V I +  IDEAHC+S+WGHDFRPDY +LG+    +G+P  +ALTATAT     D+  +L+L+    +++   RPN++  +      A+K  R+ +++   +  GIVYC TRK  +E+A  I S   S    YHGG+   +R   Q  FI  + D+   TNAFGMG+D+ D+R+V+HF +P + EA+ QE GRAGRDG+ +   LL    D   QE  I   +  A  I DV +    E  E  +  R  D + + G+G      +   +   M+G+                L++ E+  R +L L             EK+ ++  L   + C +Q +L YF E       + P C  C  D+   E+  ER   AP D     + +  S
Sbjct:    1 MTKLQQTLYQFFGFTSFKKGQQDIIESILSGKDTIAMLPTGGGKSLCYQLPGYMLDGMVLIVSPLLSLMEDQVQQLKARGEKRAAALNSMLNRQERQFVLEHIHR--YKFLYLSPEALQSPYVLEKLKSVPISLFVIDEAHCISEWGHDFRPDYSKLGQLRKKLGHPPVLALTATATKETLQDVMNLLELQHAVRHLNSVNRPNIALRVENAADTAEKIDRVIQLVENLQGPGIVYCPTRKWAKELAGEIKSKTSSRADFYHGGLESGDRILIQQQFIHNQLDVICCTNAFGMGVDKPDIRYVIHFHLPQTAEAFMQEIGRAGRDGKPSVSILLRAPGDFELQEQIIQMESVTAEEIADVIRVL--EKTEERDERRLRDVLLQYGVGETQARMM---IHLFMQGK------------TSVELMKKEISYRMELKL-------------EKMHRVSFLLQRDGCLRQALLTYFDESYEPDDGNLPCCSHCGFDLSLYEQKGERSKMAPLDSWSSELHRIFS 488

[Close]

BLAST of recombinase RecQ vs. SwissProt
Match: gi|22654276|sp|O94762.2|RECQ5_HUMAN (RecName: Full=ATP-dependent DNA helicase Q5; AltName: Full=DNA helicase, RecQ-like type 5; Short=RecQ5; AltName: Full=RecQ protein-like 5)

HSP 1 Score: 280.411 bits (716), Expect = 1.813e-81
Identity = 157/364 (43.13%), Postives = 219/364 (60.16%), Query Frame = 0

Query:    6 RARAKLKEVFGFEDFLDG-QEGVMEEILSG-RDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMKNGAYQ--LVYIAPERFRAGSFMSALEGVK----IEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISGFERP----NLSFTITPVEKVAQKYTRLK----KVLAEHK------TGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYADTRTQEFFI 347
            R R+ LK+VFGF+ F    QE     ++ G +D  V MPTG GKSLCYQLPAL  +G+T+VVSPLIAL++DQVD L    V V+ +NS LS  E+KE L  ++    Q  ++YI PE   + SF   L  +     +  + +DEAHC+SQWGHDFRPDY+RLG     +G+  CVALTATATP V++D+   L L+ P   ++ F+ P    NL + +   E ++  Y  LK    K L +         GIVYC TR+  E++A  +   G++  AYH G+   ER   QN ++  K  + VAT +FGMG+D+++VRFV H+ I  S+  YYQE+GRAGRDG+ ++C L ++  D     F I
Sbjct:   15 RVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPALLAKGITIVVSPLIALIQDQVDHLLTLKVRVSSLNSKLSAQERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKP---VAIFKTPCFRANLFYDVQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLI 375

[Close]

BLAST of recombinase RecQ vs. SwissProt
Match: gi|75334307|sp|Q9FT72.1|RQL3_ARATH (RecName: Full=ATP-dependent DNA helicase Q-like 3; AltName: Full=RecQ-like protein 3; Short=AtRecQ3; Short=AtRecQl3)

HSP 1 Score: 274.633 bits (701), Expect = 2.721e-81
Identity = 139/341 (40.76%), Postives = 207/341 (60.70%), Query Frame = 0

Query:   15 FGFEDFLDGQEGVMEEILSGRDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMKNG--AYQLVYIAPERFRAGSFMSALEGVK----IEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISGFERPNLSFTITPVEKVAQKYTRLKKVLAE--HKTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYADTRTQEFFI 347
            FG  DF   Q   ++ ++SGRD   +MPTGGGKS+CYQ+PAL + G+ LVVSPLIALM++QV AL+E+G+A   ++ST +   + +  E + +G  + +L+Y+ PE      FM  L  +     + ++AIDEAHC+S WGHDFRP Y +L    D++ +   +ALTATA P V+ D+   L LR+P    S F RPN+ + +   + +   YT L  +L    +   I+YC  R   ++++  + S G+S  AYH G++ + R    + ++S K  I VAT AFGMGID+ DVR V HF IP S+E++YQE+GRAGRD   +   L +   D +  E+ +
Sbjct:   32 FGHADFRGKQLEAIQAVVSGRDCFCLMPTGGGKSICYQIPALAKPGIVLVVSPLIALMENQVMALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRKLHSRGLLNLIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDVIDSLNLRNPLVLKSSFNRPNIFYEVRYKDLLDNAYTDLGNLLKSCGNICAIIYCLERTTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGIDKKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLL 372

[Close]

BLAST of recombinase RecQ vs. SwissProt
Match: gi|81916044|sp|Q8VID5.1|RECQ5_MOUSE (RecName: Full=ATP-dependent DNA helicase Q5; AltName: Full=DNA helicase, RecQ-like type 5; Short=RecQ5; AltName: Full=RECQL5beta; AltName: Full=RecQ protein-like 5)

HSP 1 Score: 279.256 bits (713), Expect = 4.042e-81
Identity = 155/365 (42.47%), Postives = 217/365 (59.45%), Query Frame = 0

Query:    6 RARAKLKEVFGFEDFLDG-QEGVMEEILSG-RDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMKNGA--YQLVYIAPERFRAGSFMSALEGVK----IEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISGFERP----NLSFTITPVEKVAQKYTRLK----KVLAEHK-------TGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYADTRTQEFFI 347
            R R+ LK+VFGF+ F    QE     ++ G  D  V MPTG GKSLCYQLPAL   G+T+VVSPLIAL++DQVD L    V V+ +NS LS  E+KE L  ++      +L+YI PE   + SF   L  +     +  + +DEAHC+SQWGHDFRPDY+RLG     + +  CVALTATATP V++D+   L L+ P   ++ F+ P    NL + +   E +   Y  L+    K L +          GIVYC TR+  E++A  + S G++  AYH G+   +R + QN ++  K  + VAT +FGMG+D+++VRFV H+ I  S+  YYQE+GRAGRDG+ ++C L ++  D     F I
Sbjct:   15 RVRSTLKKVFGFDSFKTPLQESATMAVVKGAEDVFVCMPTGAGKSLCYQLPALLASGITIVVSPLIALIQDQVDHLLALKVQVSSLNSKLSVQERKELLSDLERDKPRTKLLYITPEMAASASFQPTLNSLVSRNLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRSRLAHAPCVALTATATPQVQEDVFAALHLKQP---VASFKTPCFRANLFYDVQFKELIPDVYGNLRDFCLKALGQKAENGSSSGCGIVYCRTREACEQLAIELSSRGVNAKAYHAGLKASDRTQVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLI 376

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BLAST of recombinase RecQ vs. SwissProt
Match: gi|544604564|sp|D4ACP5.1|RECQ5_RAT (RecName: Full=ATP-dependent DNA helicase Q5; AltName: Full=DNA helicase, RecQ-like type 5; Short=RecQ5; AltName: Full=RecQ protein-like 5)

HSP 1 Score: 275.789 bits (704), Expect = 6.514e-80
Identity = 155/365 (42.47%), Postives = 219/365 (60.00%), Query Frame = 0

Query:    6 RARAKLKEVFGFEDFLDG-QEGVMEEILSG-RDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMKNGA--YQLVYIAPERFRAGSFMSALEGVKIEMV----AIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISGFERP----NLSFTITPVEKVAQKYTRLK----KVLAEHK-------TGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYADTRTQEFFI 347
            R R+ LK+VFGF+ F    QE  +  ++ G +D  V MPTG GKSLCYQLPA+  +G+T+VVSPLIAL++DQVD L    V V+ +NS LS  E+KE L  ++      +L+YI PE   + SF   L  +    +     +DEAHC+SQWGHDFRPDY+RLG     + +  CVALTATATP V++D+   L L+ P   ++ F+ P    NL + +   E +   Y  L+    K L +          GIVYC TR+  E++A  + S G++  AYH G+   ER + QN ++  K  + VAT +FGMG+D+++VRFV H+ I  S+  YYQE+GRAGRDG+ ++C L ++  D     F I
Sbjct:   15 RVRSTLKKVFGFDSFKTPLQESAIMAVVKGDKDVFVCMPTGAGKSLCYQLPAVLAKGITIVVSPLIALIQDQVDHLLALKVQVSSLNSKLSVQERKELLSDLERDKPRTKLLYITPEMAASASFQPTLNSLLSRNLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRSRLAHAPCVALTATATPQVQEDVFAALHLKQP---VASFKTPCFRANLFYDVQFKELIPDVYGNLRDFCLKALGQKADNGSSSGCGIVYCRTREACEQLAIELSSRGVNAKAYHAGLKASERTQVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLI 376

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BLAST of recombinase RecQ vs. nr
Match: gi|517940924|ref|WP_019111132.1| (RecQ family ATP-dependent DNA helicase [Verrucomicrobia bacterium SCGC AAA164-L15])

HSP 1 Score: 1207.97 bits (3124), Expect = 0.000e+0
Identity = 576/652 (88.34%), Postives = 616/652 (94.48%), Query Frame = 0

Query:    1 MSAIDRARAKLKEVFGFEDFLDGQEGVMEEILSGRDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMKNGAYQLVYIAPERFRAGSFMSALEGVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISGFERPNLSFTITPVEKVAQKYTRLKKVLAEHKTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYADTRTQEFFIDGVNPGAGMIRDVYQFFLNEADENYEVHRTLDEIKEGIGAKNGMAIGAALGALMRGRWVERFDIAGSRSKGTRLLRPEVLSRDLVLDEAALLEKERRDREKLEKMVQLCYANTCRQQWILEYFGEEDAPVCGSCDVCRGEENSERRAPSDEEDLNVRKFLSGVARMSRRTATGWQGIYGRGRIIQMLVGSKSQEVLRVRLHELKTYGLLKEQGTAYLNALARSLNDGGLIVTQMGEYPLVTLTPRGEQAMKGKTSYALEWPSKEGAARPEGEEAALKDLGFDGRLYDRLKDVRTRLAKGEQVPAY 652
            MSAIDRAR KL+EVFGFEDFLDGQE V++EILSGRDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTL+W EQKERL+GMK+GAY+LVYIAPERFRA SFMSAL  VKIEMVAIDEAHCLSQWGHDFRPDYMRLGKAL+ MG PQCVALTATATPIVR+DIR VL LR+PFE+ISGFERPNLSFTITPVEKVAQKY RLKKVLAE+KTGIVYCATRKKVEEVAETIHSWG+ CIAYHGGMSD+ERE TQN FISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEA+ C+LLFNYADTRTQEFFIDGVNPG GMIRDVYQFFLNEAD++YEVHRTLDE+KE IGAKNGMA+GAALGAL+RGRWVERFD+ G R+KGTRLL+P+VL+RDL LDEAAL EKERRDREKLEKMVQLCYANTCRQQW+LEYFGE DAPVCGSCDVCRGEENSERRAPSD+EDL VRKFLSGVARMSRRTA GW+GI+GRGRI+QML+GSKSQEVLRVRLHELKTYG+LK+QGTAYLNALARSLN+GGLIVTQMGEYPLVTLTPRGEQ M GKTSY+LEWPS +G ++   E   LKDLGFDG+LYDRLKDVRTRLAK  QVPAY
Sbjct:    1 MSAIDRAREKLQEVFGFEDFLDGQETVIDEILSGRDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLTWNEQKERLDGMKSGAYRLVYIAPERFRASSFMSALSDVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALEKMGRPQCVALTATATPIVREDIRGVLNLREPFESISGFERPNLSFTITPVEKVAQKYGRLKKVLAENKTGIVYCATRKKVEEVAETIHSWGLKCIAYHGGMSDREREDTQNAFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEASVCELLFNYADTRTQEFFIDGVNPGPGMIRDVYQFFLNEADDSYEVHRTLDEVKEAIGAKNGMAVGAALGALIRGRWVERFDVPGMRAKGTRLLKPDVLTRDLTLDEAALEEKERRDREKLEKMVQLCYANTCRQQWVLEYFGEVDAPVCGSCDVCRGEENSERRAPSDDEDLIVRKFLSGVARMSRRTAAGWEGIFGRGRIVQMLLGSKSQEVLRVRLHELKTYGILKKQGTAYLNALARSLNNGGLIVTQMGEYPLVTLTPRGEQVMMGKTSYSLEWPSNDGGSKTSAEGVDLKDLGFDGQLYDRLKDVRTRLAKASQVPAY 652

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BLAST of recombinase RecQ vs. nr
Match: gi|1200466839|gb|OUV82168.1| (recombinase RecQ [Verrucomicrobiaceae bacterium TMED137])

HSP 1 Score: 1201.42 bits (3107), Expect = 0.000e+0
Identity = 574/652 (88.04%), Postives = 612/652 (93.87%), Query Frame = 0

Query:    1 MSAIDRARAKLKEVFGFEDFLDGQEGVMEEILSGRDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMKNGAYQLVYIAPERFRAGSFMSALEGVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISGFERPNLSFTITPVEKVAQKYTRLKKVLAEHKTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYADTRTQEFFIDGVNPGAGMIRDVYQFFLNEADENYEVHRTLDEIKEGIGAKNGMAIGAALGALMRGRWVERFDIAGSRSKGTRLLRPEVLSRDLVLDEAALLEKERRDREKLEKMVQLCYANTCRQQWILEYFGEEDAPVCGSCDVCRGEENSERRAPSDEEDLNVRKFLSGVARMSRRTATGWQGIYGRGRIIQMLVGSKSQEVLRVRLHELKTYGLLKEQGTAYLNALARSLNDGGLIVTQMGEYPLVTLTPRGEQAMKGKTSYALEWPSKEGAARPEGEEAALKDLGFDGRLYDRLKDVRTRLAKGEQVPAY 652
            MSAIDRAR KL+E+FGFEDFLDGQEGV+E+ILSGRDGSVVMPTGGGKSLCYQLPALCR GVTLVVSPLIALMKDQVDALEERGVAVTLINSTL+W EQKERLEGMKNGAY+LVYIAPERFRA SFM AL  VKIEMVAIDEAHCLSQWGHDFRPDYMRLGKAL+ MG PQCVALTATATPIVR+DIR VL LR+PFE+ISGFERPNLSFTITPVEKVAQKY RLKKVLAE+KTGIVYCATRKKVEEVAETIHSWG+ CIAYHGGMSDQERE TQN FISR+ADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQ AGRAGRDGEA+ C+LLFNYADTRTQEFFIDGVNPG GMIRDVYQFFLNE DENYEVHRTLDEIK+ IGAKNGMA+GAALG+L+RGRWVERFD+ G R+KGTRLL+P+VL+RDL LDEAAL EKERRDREKLEKMVQLCYANTCRQQW+LEYFGE DAPVCGSCDVCRGEENSERRAPSDEE+L VRKFLSGVARMSRRT TGW+GI+GRGRI+QML+GSKSQEVLRVRLHELKTYG+LK+QGTAYLNALARSLN GGLIVTQMGEYPLVTLTPRGEQ M GKTSY+LEWPS +G ++   E   L+DLGFDG+LYDRLKDVRTRLAK  QVPAY
Sbjct:    1 MSAIDRAREKLQEIFGFEDFLDGQEGVIEQILSGRDGSVVMPTGGGKSLCYQLPALCRGGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLTWNEQKERLEGMKNGAYRLVYIAPERFRASSFMXALSDVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALEDMGRPQCVALTATATPIVREDIRGVLNLREPFESISGFERPNLSFTITPVEKVAQKYGRLKKVLAENKTGIVYCATRKKVEEVAETIHSWGLKCIAYHGGMSDQEREDTQNAFISREADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQXAGRAGRDGEASVCELLFNYADTRTQEFFIDGVNPGPGMIRDVYQFFLNEVDENYEVHRTLDEIKDAIGAKNGMAVGAALGSLIRGRWVERFDVPGMRAKGTRLLKPDVLTRDLTLDEAALEEKERRDREKLEKMVQLCYANTCRQQWVLEYFGEVDAPVCGSCDVCRGEENSERRAPSDEENLIVRKFLSGVARMSRRTPTGWEGIFGRGRIVQMLLGSKSQEVLRVRLHELKTYGILKKQGTAYLNALARSLNSGGLIVTQMGEYPLVTLTPRGEQVMMGKTSYSLEWPSNDGGSKTSAEGVDLQDLGFDGQLYDRLKDVRTRLAKAAQVPAY 652

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BLAST of recombinase RecQ vs. nr
Match: gi|740292959|ref|WP_038131517.1| (ATP-dependent DNA helicase RecQ [Verrucomicrobia bacterium SCGC AAA168-F10])

HSP 1 Score: 1201.04 bits (3106), Expect = 0.000e+0
Identity = 574/652 (88.04%), Postives = 614/652 (94.17%), Query Frame = 0

Query:    1 MSAIDRARAKLKEVFGFEDFLDGQEGVMEEILSGRDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMKNGAYQLVYIAPERFRAGSFMSALEGVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISGFERPNLSFTITPVEKVAQKYTRLKKVLAEHKTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYADTRTQEFFIDGVNPGAGMIRDVYQFFLNEADENYEVHRTLDEIKEGIGAKNGMAIGAALGALMRGRWVERFDIAGSRSKGTRLLRPEVLSRDLVLDEAALLEKERRDREKLEKMVQLCYANTCRQQWILEYFGEEDAPVCGSCDVCRGEENSERRAPSDEEDLNVRKFLSGVARMSRRTATGWQGIYGRGRIIQMLVGSKSQEVLRVRLHELKTYGLLKEQGTAYLNALARSLNDGGLIVTQMGEYPLVTLTPRGEQAMKGKTSYALEWPSKEGAARPEGEEAALKDLGFDGRLYDRLKDVRTRLAKGEQVPAY 652
            MSAIDRAR KL+EVFGFEDFLDGQE V++EILSGRDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTL+W EQKERL+GMK+GAY+LVYIAPERFRA SFMSAL  VKIEMVAIDEAHCLSQWGHDFRPDYMRLGKAL+ MG PQCVALTATATPIVR+DIR VL LR+PFE+ISGFERPNLSFTITPVEKVAQKY RLKKVLAE+KTGIVYCATRKKVEEVAETIHSWG+ CIAYHGGMSD+ERE TQN FISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEA+ C+LLFNYADTRTQEFFIDGVNPG GMIRDVYQFFLNEAD+ YEVHRTLDE+K+ IGAKNGMA+GAALGAL+RGRWVERFD+ G R+KGTRLL+P+VL+RDL LDEAAL EKERRDREKLEKMVQLCYANTCRQQW+LEYFGE DAPVCGSCDVCRGEENSERRAPSD+EDL VRKFLSGVARMSRRTA GW+GI+GRGRI+QML+GSKSQEVLRVRLHELKTYG+LK+QGTAYLNALARSLN+GGLIVTQMGEYPLVT TPRGEQ M GKTSY+LEWPS +G ++   E   LKDLGFDG+LYDRLKDVRTRLAK  QVPAY
Sbjct:    1 MSAIDRAREKLQEVFGFEDFLDGQETVIDEILSGRDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLTWNEQKERLDGMKSGAYRLVYIAPERFRASSFMSALSDVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALEKMGRPQCVALTATATPIVREDIRGVLNLREPFESISGFERPNLSFTITPVEKVAQKYGRLKKVLAENKTGIVYCATRKKVEEVAETIHSWGLKCIAYHGGMSDREREDTQNAFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEASVCELLFNYADTRTQEFFIDGVNPGPGMIRDVYQFFLNEADDAYEVHRTLDEVKDAIGAKNGMAVGAALGALIRGRWVERFDVPGMRAKGTRLLKPDVLTRDLTLDEAALEEKERRDREKLEKMVQLCYANTCRQQWVLEYFGEVDAPVCGSCDVCRGEENSERRAPSDDEDLIVRKFLSGVARMSRRTAAGWEGIFGRGRIVQMLLGSKSQEVLRVRLHELKTYGILKKQGTAYLNALARSLNNGGLIVTQMGEYPLVTPTPRGEQVMMGKTSYSLEWPSNDGGSKTSAEGVDLKDLGFDGQLYDRLKDVRTRLAKASQVPAY 652

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BLAST of recombinase RecQ vs. nr
Match: gi|1200401565|gb|OUV19190.1| (recombinase RecQ [Verrucomicrobiaceae bacterium TMED86])

HSP 1 Score: 1155.97 bits (2989), Expect = 0.000e+0
Identity = 545/652 (83.59%), Postives = 605/652 (92.79%), Query Frame = 0

Query:    1 MSAIDRARAKLKEVFGFEDFLDGQEGVMEEILSGRDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMKNGAYQLVYIAPERFRAGSFMSALEGVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISGFERPNLSFTITPVEKVAQKYTRLKKVLAEHKTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYADTRTQEFFIDGVNPGAGMIRDVYQFFLNEADENYEVHRTLDEIKEGIGAKNGMAIGAALGALMRGRWVERFDIAGSRSKGTRLLRPEVLSRDLVLDEAALLEKERRDREKLEKMVQLCYANTCRQQWILEYFGEEDAPVCGSCDVCRGEENSERRAPSDEEDLNVRKFLSGVARMSRRTATGWQGIYGRGRIIQMLVGSKSQEVLRVRLHELKTYGLLKEQGTAYLNALARSLNDGGLIVTQMGEYPLVTLTPRGEQAMKGKTSYALEWPSKEGAARPEGEEAALKDLGFDGRLYDRLKDVRTRLAKGEQVPAY 652
            MS++DRAR  LKEVFGFEDFLDGQE V+ +ILSG+DGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDAL ER VAVTLINSTLSW EQKERL+GM+ G Y+LVYIAPERF+A SFM AL+ V IEMVAIDEAHCLSQWGHDFRPDYM+LGKAL+A+G PQCVALTATATPIVR+DIRKVL+LR+PFENISGFERPNLSFT+T VEKVAQKY RL+KVL  HKTGIVYCATRKKV+EVAETIHSWG+ C+AYHGGMSDQERE TQNTFIS+KADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFC+LLFNYADTRTQEFFIDGVNPGAGMIRDVYQ+FLN ADEN+E H TLD+IKE IGAKNGMAIGAALG+L+RGRW+ERFD+ GSR+KGTRLL+P+V+++DLVLDEAAL EKERRDREKLEKMVQ CY NTCRQQW+LEYFGE +AP+CGSCDVCRGEE+SERRAP+++EDL  RKFLSGVARMSRRT TGW+GI+GRGRI+QMLVGSKSQEVLRVRLHELKTYG+LKEQGTAYLNALARSL++GGL+VT+MGEYPLVTLT RGEQ M GKTSYALEWP + G ++   +   L+DLGFD +LY+RLKDVR R+AK E+VPAY
Sbjct:    4 MSSLDRAREVLKEVFGFEDFLDGQEVVIGDILSGQDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALVERDVAVTLINSTLSWPEQKERLDGMRRGDYRLVYIAPERFKASSFMDALKDVSIEMVAIDEAHCLSQWGHDFRPDYMKLGKALEALGRPQCVALTATATPIVREDIRKVLQLREPFENISGFERPNLSFTVTAVEKVAQKYARLQKVLKAHKTGIVYCATRKKVDEVAETIHSWGLKCVAYHGGMSDQEREDTQNTFISKKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCELLFNYADTRTQEFFIDGVNPGAGMIRDVYQYFLNHADENFETHETLDQIKEAIGAKNGMAIGAALGSLLRGRWIERFDVPGSRAKGTRLLKPDVVAKDLVLDEAALEEKERRDREKLEKMVQFCYGNTCRQQWVLEYFGEINAPLCGSCDVCRGEESSERRAPTEDEDLITRKFLSGVARMSRRTPTGWEGIFGRGRIVQMLVGSKSQEVLRVRLHELKTYGMLKEQGTAYLNALARSLHEGGLLVTKMGEYPLVTLTQRGEQVMLGKTSYALEWPVQGGGSKVSNDGVVLEDLGFDAKLYERLKDVRNRMAKAERVPAY 655

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BLAST of recombinase RecQ vs. nr
Match: gi|1240609062|gb|PAW63479.1| (recombinase RecQ [Verrucomicrobiae bacterium Tous-C4TDCM])

HSP 1 Score: 932.554 bits (2409), Expect = 0.000e+0
Identity = 444/642 (69.16%), Postives = 525/642 (81.78%), Query Frame = 0

Query:   11 LKEVFGFEDFLDGQEGVMEEILSGRDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMKNGAYQLVYIAPERFRAGSFMSALEGVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISGFERPNLSFTITPVEKVAQKYTRLKKVLAEHKTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYADTRTQEFFIDGVNPGAGMIRDVYQFFLNEADENYEVHRTLDEIKEGIGAKNGMAIGAALGALMRGRWVERFDIAGSRSKGTRLLRPEVLSRDLVLDEAALLEKERRDREKLEKMVQLCYANTCRQQWILEYFGEEDAPVCGSCDVCRGEENSERRAPSDEEDLNVRKFLSGVARMSRRTATGWQGIYGRGRIIQMLVGSKSQEVLRVRLHELKTYGLLKEQGTAYLNALARSLNDGGLIVTQMGEYPLVTLTPRGEQAMKGKTSYALEWPSKEGAARPEGEEAALKDLGFDGRLYDRLKDVRTRLAKGEQVPAY 652
            LK+ FG   FLDGQ+ V+E+I SGRDG VVMPTGGGKSLCYQLPALC EGVTLVVSPLIALMKDQVDAL  +G+  TLINST++W +QKERL+GM+ G Y+LVY+APERFRA SF+SAL+GV++ + A+DEAHCLSQWGHDFRPDYMRLGKALD +G PQCVALTATATP+VR DI  VLKLR+PFE +SGF RPNLS  IT VEK  QKY R+++++  +KTGIVYCATRKKVEEVAET+ +W +  IAYHGGMSD ERE  QN F+ RKAD+AVATNAFGMGIDRSDVRFV+HFE+PGSVEAYYQEAGRAGRDGEAA C+LLFNYADTRTQEFFI+G NPGA  IR+VYQ+ LN AD+ YEVHRT+++I EG G KN MA+ ++L AL R  ++ERFDI G R +GTRL +P+V +R L LDEAAL EKERRDR+KL+ MV+LCYA TCRQQWIL YFGEEDA VCG+CD+CR  E +++RAP++EE L VRK LSGVARMSR+TA GW G YGRG+I+QML GS+SQE+L   L +L TYG+LKEQGT YLNAL R+L D GL+ T  GEYPL+TLT  GE+ M+G   Y L WPS   AA   G   +L D GFDG LY  L+D+R+ LAK ++VP Y
Sbjct:   17 LKKHFGHGGFLDGQDRVIEQIASGRDGLVVMPTGGGKSLCYQLPALCFEGVTLVVSPLIALMKDQVDALLSKGIPATLINSTVAWEDQKERLDGMRTGRYKLVYVAPERFRAESFLSALKGVEVSLFAVDEAHCLSQWGHDFRPDYMRLGKALDKIGRPQCVALTATATPVVRADILDVLKLREPFEVVSGFARPNLSLGITAVEKKQQKYDRIREIITANKTGIVYCATRKKVEEVAETLAAWRIKAIAYHGGMSDTERENAQNIFLQRKADVAVATNAFGMGIDRSDVRFVIHFEVPGSVEAYYQEAGRAGRDGEAATCELLFNYADTRTQEFFIEGANPGAHTIREVYQYLLNTADKEYEVHRTIEDITEGAGVKNSMAVSSSLAALGRAGYIERFDIPGKRLRGTRLKKPDVFARALELDEAALEEKERRDRDKLKSMVELCYARTCRQQWILGYFGEEDADVCGNCDICRDSEGNDQRAPTEEESLIVRKALSGVARMSRKTAEGWDGRYGRGKIVQMLCGSRSQEILAGGLDQLSTYGILKEQGTGYLNALLRALGDAGLVRTDAGEYPLLTLTALGEKVMRGGGKYRLSWPSNSSAA---GSVDSLADQGFDGSLYSMLRDLRSSLAKRDEVPPY 655

[Close]

BLAST of recombinase RecQ vs. nr
Match: gi|918704134|ref|WP_052573167.1| (ATP-dependent DNA helicase RecQ [Haloferula sp. BvORR071])

HSP 1 Score: 910.212 bits (2351), Expect = 0.000e+0
Identity = 437/642 (68.07%), Postives = 517/642 (80.53%), Query Frame = 0

Query:   11 LKEVFGFEDFLDGQEGVMEEILSGRDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMKNGAYQLVYIAPERFRAGSFMSALEGVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISGFERPNLSFTITPVEKVAQKYTRLKKVLAEHKTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYADTRTQEFFIDGVNPGAGMIRDVYQFFLNEADENYEVHRTLDEIKEGIGAKNGMAIGAALGALMRGRWVERFDIAGSRSKGTRLLRPEVLSRDLVLDEAALLEKERRDREKLEKMVQLCYANTCRQQWILEYFGEEDAPVCGSCDVCRGEENSERRAPSDEEDLNVRKFLSGVARMSRRTATGWQGIYGRGRIIQMLVGSKSQEVLRVRLHELKTYGLLKEQGTAYLNALARSLNDGGLIVTQMGEYPLVTLTPRGEQAMKGKTSYALEWPSKEGAARPEGEEAALKDLGFDGRLYDRLKDVRTRLAKGEQVPAY 652
            L++ FG   FLDGQ+ V+E+I SG DG VVMPTGGGKSLCYQLPALC EGVTLVVSPLIALMKDQVDAL  +G+  TLINST+ W EQKERL+GM+ G ++LVY+APERFRA SF++AL+GV++ + A+DEAHCLSQWGHDFRPDY+RLGKALD +G PQCVALTATATPIVR DI +VLKL+D FE +SGF RPNLS  IT VEK  QKY R++ ++  HKTGI+YCATRKKVEEVAE + SWG   IAYHGGMSD+ERE  QN F+ RKADIAVATNAFGMGIDRSDVRFV+HFE+PGS+EAYYQEAGRAGRDGEAA C+LLFNYADTRTQEFFIDG NPGA +IR VYQ+ LN+AD+ YEVHR++++I EG   KN MA+ +AL AL R  ++ERFD+ G R +GTRL RP+V +R L LD+AAL EK+RRDREKL+ MV LCYA TCRQQWILEYFGEE+A  CG+CD+CR     E+RAP+ EED+ VRK LSGVARMSR+T  GW+G +GRG+I+QML GS+SQE+L   L +L TYGLLK QGT Y+N L RSL D GL+  ++GE+PL+TLT RGE AM GK  + L WPS   A    G E  LKDLGFD +LY  L+DVR  LA  + VP Y
Sbjct:   23 LQKHFGHSGFLDGQDRVIEQITSGLDGLVVMPTGGGKSLCYQLPALCFEGVTLVVSPLIALMKDQVDALVAKGIPATLINSTVPWPEQKERLDGMRTGKWKLVYVAPERFRAESFLNALQGVEVSLFAVDEAHCLSQWGHDFRPDYLRLGKALDKIGRPQCVALTATATPIVRADILEVLKLKDAFEVVSGFARPNLSLAITQVEKKQQKYDRIRDIVRVHKTGIIYCATRKKVEEVAENLASWGARSIAYHGGMSDKEREDAQNIFLQRKADIAVATNAFGMGIDRSDVRFVIHFEVPGSIEAYYQEAGRAGRDGEAAHCELLFNYADTRTQEFFIDGANPGASVIRQVYQYLLNQADKEYEVHRSIEDITEGAEVKNPMAVSSALAALGRSGYIERFDVPGKRQRGTRLKRPDVFARALELDDAALEEKDRRDREKLKSMVALCYARTCRQQWILEYFGEENAETCGNCDMCRENGGGEQRAPTLEEDMVVRKALSGVARMSRKTGFGWEGKFGRGKIVQMLCGSRSQEILAGGLDKLSTYGLLKTQGTGYVNGLMRSLQDAGLLRVEVGEFPLLTLTERGENAMLGKAKFRLVWPST--APVTAGHE--LKDLGFDSKLYSLLRDVRQTLADRDDVPPY 660

[Close]

BLAST of recombinase RecQ vs. nr
Match: gi|1240605317|gb|PAW59917.1| (recombinase RecQ [Verrucomicrobiae bacterium Tous-C3TDCM] >gi|1241361910|gb|PAZ05581.1| recombinase RecQ [Verrucomicrobiae bacterium AMD-G2])

HSP 1 Score: 909.057 bits (2348), Expect = 0.000e+0
Identity = 420/646 (65.02%), Postives = 521/646 (80.65%), Query Frame = 0

Query:    8 RAKLKEVFGFEDFLDGQEGVMEEILSGRDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMKNGAYQLVYIAPERFRAGSFMSALEGVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISGFERPNLSFTITPVEKVAQKYTRLKKVLAEHKTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYADTRTQEFFIDGVNPGAGMIRDVYQFFLNEADENYEVHRTLDEIKEGIGAKNGMAIGAALGALMRGRWVERFDIAGSRSKGTRLLRPEVLSRDLVLDEAALLEKERRDREKLEKMVQLCYANTCRQQWILEYFGEEDAPVCGSCDVCRGEENSERRAPSDEEDLNVRKFLSGVARMSRRTATGWQGIYGRGRIIQMLVGSKSQEVLRVRLHELKTYGLLKEQGTAYLNALARSLNDGGLIVTQMGEYPLVTLTPRGEQAMKGKTSYALEWPSKEGAARPEGEEA-ALKDLGFDGRLYDRLKDVRTRLAKGEQVPAY 652
            R  LK+ FGFE+FLDGQE V+ +I+SG+DG VVMPTGGGKSLCYQLPALC EGV+LV+SPLIALMKDQVDAL  RG+  T+INST SW EQKERL+G++ G ++LVY+APERFRA SF+ AL G+ IE+ A+DEAHCLSQWGHDFRPDY+RLGKAL+ +G PQCVALTATATP+VR+DI +VL+LRD FE +SGF RPNLS  IT  E V  K  R+K ++A HKTGIVYCATRKKVE V+ET+ SWG+ C+AYHGGMSD ERER QN FIS++AD+AVATNAFGMGIDRSDVRFV+H+EIPGSVEAYYQEAGRAGRDGE+A+C+LL+NYADTRTQEFFIDG NP   +IRDVYQF LN AD+N+EVH+T+++I  G   KN M +G+AL  L R  ++ERFDI   R +GTRLL+P+V  R LV+DE A+ EK+RRDREKL+ M++L Y+  CRQQWIL+YFGEE A +CG+CDVCR +++ E RAP+D+E L V+K LSGVARMSR+    W+  YGRG+I+QMLVGSKSQ++L   L++L TYG+LK++GT Y+N + RSL D G++ T+ GEYP++TLT  GE  M GK+SY L WP      +P+ E    LKD GFD  LY  L+++R ++AK E VP+Y
Sbjct:   14 REALKKYFGFEEFLDGQEEVVSQIVSGQDGLVVMPTGGGKSLCYQLPALCFEGVSLVISPLIALMKDQVDALVARGIEATMINSTQSWEEQKERLQGIREGRWKLVYVAPERFRAESFLQALNGITIELFAVDEAHCLSQWGHDFRPDYLRLGKALEKIGRPQCVALTATATPVVREDIIEVLQLRDGFEQVSGFSRPNLSLNITAAENVQHKDDRIKAIIAAHKTGIVYCATRKKVEAVSETLSSWGIKCVAYHGGMSDDERERAQNVFISKRADVAVATNAFGMGIDRSDVRFVMHYEIPGSVEAYYQEAGRAGRDGESAYCELLYNYADTRTQEFFIDGANPSVAVIRDVYQFLLNAADQNHEVHKTIEDISHGADLKNTMTVGSALATLARSGYIERFDIPKKRMRGTRLLKPDVFVRGLVIDEKAIEEKDRRDREKLKAMIELSYSRVCRQQWILQYFGEESAELCGNCDVCRDQDSGEARAPTDDEALVVKKILSGVARMSRKKDGVWEAKYGRGKIVQMLVGSKSQDILSAGLNQLTTYGILKDKGTGYVNGMMRSLTDAGILRTEAGEYPVMTLTAHGENVMMGKSSYRLIWP------KPKAETTGGLKDHGFDTTLYTVLRNLREKIAKAENVPSY 653

[Close]

BLAST of recombinase RecQ vs. nr
Match: gi|1240615623|gb|PAW69681.1| (recombinase RecQ [Verrucomicrobiae bacterium Tous-C5FEB])

HSP 1 Score: 897.501 bits (2318), Expect = 0.000e+0
Identity = 420/642 (65.42%), Postives = 510/642 (79.44%), Query Frame = 0

Query:   11 LKEVFGFEDFLDGQEGVMEEILSGRDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMKNGAYQLVYIAPERFRAGSFMSALEGVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISGFERPNLSFTITPVEKVAQKYTRLKKVLAEHKTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYADTRTQEFFIDGVNPGAGMIRDVYQFFLNEADENYEVHRTLDEIKEGIGAKNGMAIGAALGALMRGRWVERFDIAGSRSKGTRLLRPEVLSRDLVLDEAALLEKERRDREKLEKMVQLCYANTCRQQWILEYFGEEDAPVCGSCDVCRGEENSERRAPSDEEDLNVRKFLSGVARMSRRTATGWQGIYGRGRIIQMLVGSKSQEVLRVRLHELKTYGLLKEQGTAYLNALARSLNDGGLIVTQMGEYPLVTLTPRGEQAMKGKTSYALEWPSKEGAARPEGEEAALKDLGFDGRLYDRLKDVRTRLAKGEQVPAY 652
            LK+ FG+  FLDGQE V+ EI++GRDG VVMPTGGGKSLC+Q+PALC  GVT+V+SPLIALMKDQVDAL  R +  T+INSTLSW EQ+ERL+GMKNG ++LVY+APERFRA SF+ ALEG++I + A+DEAHCLSQWGHDFRPDY+RLG+AL  +G+PQC+ALTATATP+VR DI  VL LR+PFE +SGF RPNLS  IT V+   QK  R+K V+A HKTGIVYCATRKKVE V+ETI SWG+ CIAYHGGMSDQERE+ Q  FI RKADIAVATNAFGMGIDRSDVRFV+H+EIPGSVEAYYQEAGRAGRDGEA+ C+LLFNYADTRTQEFFIDG NP A +IR +Y+  L++ D+ +EVH TL+EI E    +N M++G+AL AL R  ++ERFD+   R +GTRLL+P++    L LDE A+ EKE+RDR+KL+ MV++ YA TCRQ WIL YFGE +   CG+CD+CR    SE RAP+ EE L V+K LSGVARMSRRTATGW+  +GRGRI+QML GSKSQE++   L +L TYG+L+E+GT YLN+L RSL D GL+ T  GEYPL+TLTP G+  M+ + SY L WP  E A+RP  +   LKD GFD +LY  LK +R +LA  E+VP Y
Sbjct:    7 LKKYFGYSGFLDGQEEVISEIVAGRDGLVVMPTGGGKSLCFQIPALCFGGVTIVISPLIALMKDQVDALTARNIPATMINSTLSWPEQRERLDGMKNGDWKLVYVAPERFRAESFLKALEGIEISLFAVDEAHCLSQWGHDFRPDYLRLGRALKTIGHPQCLALTATATPVVRHDISSVLALREPFERVSGFSRPNLSLNITAVDTTQQKDERMKSVIAAHKTGIVYCATRKKVESVSETIASWGLKCIAYHGGMSDQEREQAQEQFICRKADIAVATNAFGMGIDRSDVRFVIHYEIPGSVEAYYQEAGRAGRDGEASTCELLFNYADTRTQEFFIDGANPTAAVIRSIYRHLLDQCDKEFEVHETLEEIAEASDVRNSMSVGSALTALSRAGYIERFDVPKRRMRGTRLLKPQINPGQLELDETAIEEKEKRDRDKLKSMVEMSYARTCRQHWILAYFGEANPSTCGNCDICRNSSASEHRAPTKEEALIVKKTLSGVARMSRRTATGWEARFGRGRIVQMLAGSKSQEIISAGLDQLSTYGILREKGTGYLNSLMRSLADAGLVQTIAGEYPLMTLTPLGDSVMREEASYTLVWPDSE-ASRPTID---LKDHGFDPQLYSLLKGLRAKLADREKVPPY 644

[Close]

BLAST of recombinase RecQ vs. nr
Match: gi|1353606198|ref|WP_105043743.1| (RecQ family ATP-dependent DNA helicase [Rubritalea profundi] >gi|1350983168|gb|PQJ29250.1| recombinase RecQ [Rubritalea profundi])

HSP 1 Score: 889.797 bits (2298), Expect = 0.000e+0
Identity = 419/644 (65.06%), Postives = 508/644 (78.88%), Query Frame = 0

Query:   11 LKEVFGFEDFLDGQEGVMEEILSGRDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMKNGAYQLVYIAPERFRAGSFMSALEGVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISGFERPNLSFTITPVEKVAQKYTRLKKVLAEHKTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYADTRTQEFFIDGVNPGAGMIRDVYQFFLNEADENYEVHRTLDEIKEGIGAKNGMAIGAALGALMRGRWVERFDIAGSRSKGTRLLRPEVLSRDLVLDEAALLEKERRDREKLEKMVQLCYANTCRQQWILEYFGEEDAPVCGSCDVCRGEENSERRAPSDEEDLNVRKFLSGVARMSRRTATGWQGIYGRGRIIQMLVGSKSQEVLRVRLHELKTYGLLKEQGTAYLNALARSLNDGGLIVTQMGEYPLVTLTPRGEQAMKGKTSYALEWPS--KEGAARPEGEEAALKDLGFDGRLYDRLKDVRTRLAKGEQVPAY 652
            LKE FGF+ FLDGQE V+ +I++G DG VVMPTGGGKSLCYQLPALC  GV+++VSPLIALMKDQVD L  +G+  T+INSTL   EQ++R+  M+ G Y+LVY+APERF+  SF+SAL  + + + A+DEAHCLSQWGHDFRPDYMRLGKAL+ +G PQC+ALTATATP+VR D+ KVL LR PFE +SGF RPNLS  IT V K  QKY R+++++   KTGIVYCATRK+V+EVAE +H WG+SCIAYHGGMSD  RE+TQN FI ++AD+AVATNAFGMGIDRSDVRFV+HFE+PGSVEAYYQEAGRAGRDGEAA C+LLFNYADTRTQEFFI+GVNP    I +VYQ   N+AD ++EVH TLD+IK G   KNGMA+G+A+GALMR   VERFD+AGSR+KGTRLL+PEVL+  + +D AAL EKERRD  KL  MV+LCYA  CRQQWI+EYFGE DA VCGSCDVCR +   +    S  + L +RK LSGVARMSR+    WQG +GRGRI+QMLVGSKSQEV + RL  L TYGLLK+ GTAYLN L  +++D GL+ TQ GEYPLV++TPRGE  M GK++ +L WP   K  +     +   L+++GFD  LY+RLK+VR  +AK E +PAY
Sbjct:   13 LKEYFGFDGFLDGQEEVVGKIMTGSDGLVVMPTGGGKSLCYQLPALCLRGVSIIVSPLIALMKDQVDGLVAKGIPATMINSTLGLSEQRDRISRMRAGEYKLVYVAPERFKVESFISALLDIDVALFAVDEAHCLSQWGHDFRPDYMRLGKALERIGRPQCIALTATATPVVRQDMLKVLDLRSPFEIVSGFARPNLSLMITSVSKHQQKYKRIREIVKRWKTGIVYCATRKRVDEVAEMLHDWGISCIAYHGGMSDDMREKTQNVFIKKEADVAVATNAFGMGIDRSDVRFVIHFELPGSVEAYYQEAGRAGRDGEAAICELLFNYADTRTQEFFIEGVNPSYATICNVYQHLQNQADGDFEVHETLDQIKSGADVKNGMAVGSAIGALMRNGLVERFDVAGSRAKGTRLLKPEVLTSKIGIDRAALEEKERRDSSKLAAMVELCYARVCRQQWIMEYFGEADAAVCGSCDVCRSKFGKDASEGSSAQILTMRKALSGVARMSRKVGGKWQGRFGRGRIVQMLVGSKSQEVKKNRLDTLSTYGLLKQNGTAYLNELFHAMHDAGLVFTQKGEYPLVSITPRGELIMLGKSTCSLVWPKSGKNQSVATADDALVLEEVGFDPELYERLKEVRFEIAKTENIPAY 656

[Close]

BLAST of recombinase RecQ vs. nr
Match: gi|1110140830|emb|SHJ81204.1| (ATP-dependent DNA helicase RecQ [Rubritalea squalenifaciens DSM 18772])

HSP 1 Score: 876.7 bits (2264), Expect = 0.000e+0
Identity = 413/643 (64.23%), Postives = 512/643 (79.63%), Query Frame = 0

Query:   11 LKEVFGFEDFLDGQEGVMEEILSGRDGSVVMPTGGGKSLCYQLPALCREGVTLVVSPLIALMKDQVDALEERGVAVTLINSTLSWGEQKERLEGMKNGAYQLVYIAPERFRAGSFMSALEGVKIEMVAIDEAHCLSQWGHDFRPDYMRLGKALDAMGNPQCVALTATATPIVRDDIRKVLKLRDPFENISGFERPNLSFTITPVEKVAQKYTRLKKVLAEHKTGIVYCATRKKVEEVAETIHSWGMSCIAYHGGMSDQERERTQNTFISRKADIAVATNAFGMGIDRSDVRFVVHFEIPGSVEAYYQEAGRAGRDGEAAFCDLLFNYADTRTQEFFIDGVNPGAGMIRDVYQFFLNEADENYEVHRTLDEIKEGIGAKNGMAIGAALGALMRGRWVERFDIAGSRSKGTRLLRPEVLSRDLVLDEAALLEKERRDREKLEKMVQLCYANTCRQQWILEYFGEEDAPVCGSCDVCRGEENSERRAPSDEEDLNVRKFLSGVARMSRRTATGWQGIYGRGRIIQMLVGSKSQEVLRVRLHELKTYGLLKEQGTAYLNALARSLNDGGLIVTQMGEYPLVTLTPRGEQAMKGKTSYALEWPSKEGAARPEGEEAA-LKDLGFDGRLYDRLKDVRTRLAKGEQVPAY 652
            LKE FGF  FL+GQE V+E+ILSG DG VVMPTGGGKSLCYQLPALC  GVT+VVSPLIALMKDQVDAL  +G+  T+INSTL   EQ+ER+  M++G ++LVY+APERFRA  F+ A++ V++ + A+DEAHCLSQWGHDFRPDYMRLGKAL+ +G PQC+ALTATAT +VR+DI KVL+L+ PF  +SGF RPNLS  +TPVEK  QKY R+K+V+ + KTGI+YCATRK+VEEVAE ++ WG+SCIAYHGGMSD+ERERTQN FIS++AD+A+ATNAFGMGIDR DVRFV+HFE+PGS+EAYYQEAGRAGRDGEAAFC+LLFNYADTRTQEFFI+G NP    +  VYQ   N+AD N+E+  TLD+I +G   KN M++G+ALG L++   +ER+D+ GSR +GTRLL+P+VL+  + LD  AL EKE RDR+KL  MV+LCYA  CRQQWI+EYFGE+DA  CGSCDVC  +   E R   + E L ++K LSGVARMS++T   W+G YGRGRI+QMLVGSKSQEVL+  LHEL TYGLLK+ GTAY N L R +++GGLI TQ GEYPLVTLTP GE+ M GK+   L WP +  A  P  + +  + ++GFDGRL+ +LK++R  +AK + VP Y
Sbjct:   17 LKEYFGFGAFLEGQEEVVEKILSGSDGLVVMPTGGGKSLCYQLPALCLRGVTIVVSPLIALMKDQVDALNAKGIPATMINSTLGLAEQRERILRMRSGEFKLVYVAPERFRAEGFVKAIQEVEVALFAVDEAHCLSQWGHDFRPDYMRLGKALERIGRPQCIALTATATSVVREDIMKVLQLQSPFNMMSGFARPNLSLAVTPVEKRTQKYMRIKEVIKKWKTGIIYCATRKRVEEVAEMLYDWGVSCIAYHGGMSDEERERTQNVFISKEADVAIATNAFGMGIDRPDVRFVIHFEVPGSIEAYYQEAGRAGRDGEAAFCELLFNYADTRTQEFFIEGANPSYATVCAVYQHLQNQADGNFEIRETLDQIAQGADVKNAMSVGSALGVLVKNGLIERYDVPGSRVRGTRLLKPDVLTSRIGLDREALEEKEGRDRDKLGAMVELCYARICRQQWIMEYFGEKDASQCGSCDVCMSKFGGELREGDEAEVLILKKALSGVARMSQKTRGKWEGRYGRGRIVQMLVGSKSQEVLKNNLHELSTYGLLKDMGTAYTNELFRGMHEGGLIYTQRGEYPLVTLTPAGERVMFGKSDCKLVWPERYAAESPVTDSSVGMGEVGFDGRLFAQLKELRNEIAKNQGVPPY 659

The following BLAST results are available for this feature:

BLAST of recombinase RecQ vs. L. salmonis genes
BLAST of recombinase RecQ vs. SwissProt
BLAST of recombinase RecQ vs. nr

BLAST of recombinase RecQ vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 21


Match Name	E-value	Identity	Description
EMLSAG00000001573	3.566e-78	41.30	supercontig:LSalAtl2s:LSalAtl2s1271:90201:96916:-1...	[more]
EMLSAG00000003002	2.175e-72	38.46	supercontig:LSalAtl2s:LSalAtl2s170:674355:677674:-...	[more]
EMLSAG00000001574	1.402e-52	34.09	supercontig:LSalAtl2s:LSalAtl2s1271:98605:106214:1...	[more]
EMLSAG00000001248	3.214e-50	36.31	supercontig:LSalAtl2s:LSalAtl2s1202:153682:156705:...	[more]
EMLSAG00000010143	1.335e-16	25.88	supercontig:LSalAtl2s:LSalAtl2s66:712270:714003:-1...	[more]
EMLSAG00000004918	2.238e-15	24.48	supercontig:LSalAtl2s:LSalAtl2s259:1039310:1040989...	[more]
EMLSAG00000000249	8.906e-15	23.77	supercontig:LSalAtl2s:LSalAtl2s1036:82728:88820:1 ...	[more]
EMLSAG00000007141	4.379e-12	21.98	supercontig:LSalAtl2s:LSalAtl2s402:374905:376772:1...	[more]
EMLSAG00000002581	5.110e-12	21.54	supercontig:LSalAtl2s:LSalAtl2s151:1305107:1306803...	[more]
EMLSAG00000011189	1.034e-11	24.13	supercontig:LSalAtl2s:LSalAtl2s760:470421:474651:1...	[more]

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BLAST of recombinase RecQ vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|81342384\|sp\|O34748.1\|RECQ_BACSU	2.086e-101	47.14	RecName: Full=Probable ATP-dependent DNA helicase ...	[more]
gi\|54041622\|sp\|P15043.5\|RECQ_ECOLI	4.135e-99	48.36	RecName: Full=ATP-dependent DNA helicase RecQ	[more]
gi\|18202817\|sp\|Q9CL21.1\|RECQ_PASMU	5.974e-99	45.82	RecName: Full=ATP-dependent DNA helicase RecQ	[more]
gi\|19859341\|sp\|P40724.3\|RECQ_SALTY	7.303e-98	48.66	RecName: Full=ATP-dependent DNA helicase RecQ	[more]
gi\|2500112\|sp\|P71359.1\|RECQ_HAEIN	2.243e-96	46.41	RecName: Full=ATP-dependent DNA helicase RecQ	[more]
gi\|1710074\|sp\|P50729.1\|RECS_BACSU	1.189e-88	34.42	RecName: Full=Probable ATP-dependent DNA helicase ...	[more]
gi\|22654276\|sp\|O94762.2\|RECQ5_HUMAN	1.813e-81	43.13	RecName: Full=ATP-dependent DNA helicase Q5; AltNa...	[more]
gi\|75334307\|sp\|Q9FT72.1\|RQL3_ARATH	2.721e-81	40.76	RecName: Full=ATP-dependent DNA helicase Q-like 3;...	[more]
gi\|81916044\|sp\|Q8VID5.1\|RECQ5_MOUSE	4.042e-81	42.47	RecName: Full=ATP-dependent DNA helicase Q5; AltNa...	[more]
gi\|544604564\|sp\|D4ACP5.1\|RECQ5_RAT	6.514e-80	42.47	RecName: Full=ATP-dependent DNA helicase Q5; AltNa...	[more]

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BLAST of recombinase RecQ vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|517940924\|ref\|WP_019111132.1\|	0.000e+0	88.34	RecQ family ATP-dependent DNA helicase [Verrucomic...	[more]
gi\|1200466839\|gb\|OUV82168.1\|	0.000e+0	88.04	recombinase RecQ [Verrucomicrobiaceae bacterium TM...	[more]
gi\|740292959\|ref\|WP_038131517.1\|	0.000e+0	88.04	ATP-dependent DNA helicase RecQ [Verrucomicrobia b...	[more]
gi\|1200401565\|gb\|OUV19190.1\|	0.000e+0	83.59	recombinase RecQ [Verrucomicrobiaceae bacterium TM...	[more]
gi\|1240609062\|gb\|PAW63479.1\|	0.000e+0	69.16	recombinase RecQ [Verrucomicrobiae bacterium Tous-...	[more]
gi\|918704134\|ref\|WP_052573167.1\|	0.000e+0	68.07	ATP-dependent DNA helicase RecQ [Haloferula sp. Bv...	[more]
gi\|1240605317\|gb\|PAW59917.1\|	0.000e+0	65.02	recombinase RecQ [Verrucomicrobiae bacterium Tous-...	[more]
gi\|1240615623\|gb\|PAW69681.1\|	0.000e+0	65.42	recombinase RecQ [Verrucomicrobiae bacterium Tous-...	[more]
gi\|1353606198\|ref\|WP_105043743.1\|	0.000e+0	65.06	RecQ family ATP-dependent DNA helicase [Rubritalea...	[more]
gi\|1110140830\|emb\|SHJ81204.1\|	0.000e+0	64.23	ATP-dependent DNA helicase RecQ [Rubritalea squale...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold11234_size2052	supercontig	scaffold11234_size2052:62..2017 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold11234_size2052-processed-gene-0.0-mRNA-1	snap_masked-scaffold11234_size2052-processed-gene-0.0-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold11234_size2052:62..2017-

gene from alignment at scaffold11234_size2052:62..2017-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold11234_size2052-processed-gene-0.0 ID=snap_masked-scaffold11234_size2052-processed-gene-0.0|Name=recombinase RecQ|organism=Tigriopus kingsejongensis|type=gene|length=1956bp|location=Sequence derived from alignment at scaffold11234_size2052:62..2017- (Tigriopus kingsejongensis)
ATGTCCGCAATCGACCGCGCCCGCGCCAAGCTTAAGGAAGTCTTCGGATT
CGAGGATTTCCTAGACGGCCAGGAGGGCGTGATGGAGGAGATCCTCTCCG
GGCGCGATGGCTCGGTGGTGATGCCCACGGGCGGGGGAAAGTCCCTCTGT
TATCAGCTCCCCGCGCTGTGTCGCGAGGGCGTGACGCTGGTGGTGAGCCC
GCTCATCGCGCTCATGAAGGACCAGGTCGATGCCCTCGAGGAGCGCGGGG
TGGCGGTCACTTTGATCAATTCTACCCTCAGTTGGGGTGAGCAAAAGGAA
CGGCTGGAGGGCATGAAAAACGGGGCCTACCAGCTCGTTTACATCGCGCC
GGAGAGATTCCGCGCGGGTTCGTTTATGAGTGCGCTGGAGGGCGTGAAGA
TCGAGATGGTGGCGATTGATGAAGCGCACTGCCTCAGCCAGTGGGGGCAC
GACTTCCGCCCCGACTACATGCGCCTCGGCAAGGCGCTCGATGCGATGGG
AAATCCGCAATGCGTGGCCCTCACCGCGACGGCCACCCCGATTGTGCGCG
ATGACATCCGCAAGGTGCTCAAGCTGCGTGATCCTTTTGAAAATATCAGC
GGCTTCGAGCGGCCGAACCTGAGCTTCACGATCACCCCGGTGGAGAAGGT
AGCGCAAAAGTACACCCGCCTTAAAAAAGTCCTCGCCGAGCACAAAACGG
GCATCGTTTACTGCGCCACCCGTAAGAAAGTGGAGGAAGTCGCGGAGACC
ATCCACTCGTGGGGGATGAGCTGCATCGCTTATCACGGTGGGATGTCTGA
TCAGGAACGGGAGCGCACGCAGAACACCTTTATTTCGCGCAAGGCGGACA
TCGCGGTGGCGACAAATGCTTTTGGGATGGGCATCGACCGCTCCGATGTG
CGCTTCGTGGTGCACTTTGAAATCCCCGGCAGCGTGGAGGCTTACTATCA
GGAGGCGGGCCGCGCGGGGCGGGATGGCGAGGCGGCTTTTTGCGATCTCC
TCTTTAACTACGCCGACACGCGCACGCAGGAATTTTTCATCGATGGCGTG
AACCCTGGCGCGGGGATGATCCGAGACGTTTACCAATTCTTCCTCAATGA
AGCGGATGAGAACTACGAGGTTCATCGTACTTTAGACGAGATCAAAGAAG
GGATCGGGGCCAAGAACGGGATGGCCATCGGGGCGGCGCTGGGGGCGCTC
ATGCGGGGGCGGTGGGTGGAGCGCTTTGACATCGCGGGATCGCGGTCCAA
AGGCACCCGCCTTTTGCGTCCGGAAGTGCTCAGCCGTGATCTCGTGCTGG
ATGAAGCGGCCCTCCTCGAAAAGGAAAGGCGCGACCGCGAGAAGCTCGAA
AAAATGGTGCAGCTTTGCTATGCCAACACCTGCCGCCAGCAGTGGATTTT
AGAATACTTCGGCGAGGAAGATGCTCCGGTCTGTGGAAGCTGCGATGTCT
GCCGGGGGGAGGAAAATAGTGAACGCCGCGCGCCCTCGGACGAGGAAGAT
CTCAATGTGCGAAAGTTCCTCAGCGGGGTCGCTCGCATGTCGCGGAGGAC
CGCCACGGGCTGGCAGGGGATTTACGGACGGGGCCGCATTATCCAGATGC
TCGTGGGGAGTAAATCGCAGGAAGTGCTGCGGGTGCGCCTGCACGAACTC
AAGACCTACGGGCTCCTGAAAGAGCAGGGAACGGCTTATCTGAATGCGCT
CGCCCGCAGCCTGAACGATGGCGGCTTGATCGTGACCCAGATGGGCGAGT
ATCCGCTCGTGACCCTGACGCCGCGCGGCGAGCAGGCCATGAAGGGGAAG
ACGAGCTACGCGCTGGAGTGGCCCTCGAAGGAGGGCGCAGCGCGGCCCGA
GGGCGAGGAAGCGGCGCTCAAAGATCTGGGCTTCGATGGCCGACTCTACG
ACCGTTTGAAGGACGTGCGCACGCGGCTGGCAAAGGGCGAGCAGGTGCCG
GCCTAT

Synonyms

The feature 'recombinase RecQ' has the following synonyms


Synonym
Tk09437

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