choline mitochondrial, snap_masked-scaffold1226_size54525-processed-gene-0.7 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of choline mitochondrial vs. L. salmonis genes
Match: EMLSAG00000000122 (supercontig:LSalAtl2s:LSalAtl2s101:523216:528117:1 gene:EMLSAG00000000122 transcript:EMLSAT00000000122 description:"maker-LSalAtl2s101-snap-gene-5.35") HSP 1 Score: 788.489 bits (2035), Expect = 0.000e+0 Identity = 371/507 (73.18%), Postives = 424/507 (83.63%), Query Frame = 0 Query: 1 LDSKMMQWKIHMPAALMYNLCDDKYNWYYHTLPQEHCDNRVMYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGADTYRGESGPLHVSRRNWNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGKRAIGIEYEQNG-EKQQVYGQDIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHLELYVVQKCKKPITLLGAQQGASMIKVGLEWFYNQTGPARTAHLESGGFARSRPDLEHPDIMFHFLPGQVVDHGRQTPDTEAFQVHVGPMRPTSRGWIKLKSKSPQDHPLIQPNYLSTEIDRWEMRQSVRLSREIFEQAAFDSLRDGELVPGSQVQSDDQLDQFIRAKSDSAYHPSCTCKMGSAQDNMTVVDPTTRVVGVDNLRVVDASIMPSVASGNLNAPTIMLAERAADIILGRDLLTPNAVPVF 506 L S +QWKIHMPAALMYNLCDDKYNWYY+TLPQ+H +NR MYWPRGRVWGGSSSLNAMVYIRGHA D +RWE EGAEGWNY CLPYFKKAQ+H+ G YRG +GPLHVSR NN+LHSV+LEAGQQAG+P T+DVNGYQQ GM F+MTI +G R S ASAYLRPAL RPN+ TEV +VTR++FDGKRAIGIEY +NG E ++VY ++ILSGG+INSPQLLMLSGVG A HLK MDIP+V + GVGQNLQDHLE+YVVQ+CKKPITLL Q+G MI+VGL+WFYNQTG A T HLESGGF RSRPD+ HP+IMFHFLP QV+DHGRQ+P EA+QVHVGPMR +SRGWI+LKS P+DHP+IQPNYLST+ D EMR+SVRLSR IF Q AFD R E+ PG ++ SD +D FIR K+DSAYHPSCTCKMGS DNMTVVDP TRVVG++ LRVVDASIMPS+ASGNLNAPTIM+AERAADII G +L P VPV+ Sbjct: 289 LGSCYLQWKIHMPAALMYNLCDDKYNWYYNTLPQKHMNNRSMYWPRGRVWGGSSSLNAMVYIRGHAEDQNRWESEGAEGWNYQNCLPYFKKAQTHEWGPSAYRGGNGPLHVSRGTSNNSLHSVWLEAGQQAGYPFTDDVNGYQQEGMSQFEMTIKKGMRNSTASAYLRPALSRPNLTTEVGALVTRILFDGKRAIGIEYLRNGKELKRVYADEVILSGGSINSPQLLMLSGVGPAQHLKEMDIPLVADIQGVGQNLQDHLEVYVVQECKKPITLLKDQKGLRMIQVGLQWFYNQTGSASTTHLESGGFVRSRPDVSHPNIMFHFLPSQVIDHGRQSPKIEAYQVHVGPMRSSSRGWIQLKSNDPRDHPIIQPNYLSTDFDVHEMRESVRLSRNIFAQPAFDPYRGIEIAPGHELTSDKDIDAFIRDKADSAYHPSCTCKMGSTSDNMTVVDPCTRVVGLEGLRVVDASIMPSIASGNLNAPTIMIAERAADIIKGDGVLPPAQVPVY 795
BLAST of choline mitochondrial vs. L. salmonis genes
Match: EMLSAG00000012767 (supercontig:LSalAtl2s:LSalAtl2s96:160426:167507:-1 gene:EMLSAG00000012767 transcript:EMLSAT00000012767 description:"maker-LSalAtl2s96-snap-gene-1.14") HSP 1 Score: 244.588 bits (623), Expect = 1.005e-73 Identity = 173/510 (33.92%), Postives = 251/510 (49.22%), Query Frame = 0 Query: 22 DDKYNWYYHTLPQ--EHCDNRV---MYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGADTYRGESGPLHVSRRNWNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGKR--AIGIEYEQNGEKQQVYG-QDIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHLELYVVQ-KCKKPITLLGAQQGASMIKVGLEWFYNQTGPARTAHLESGGFARSRPDLEH-----PDIMFHFLPGQVV-DHGRQTPDT-----------------EAFQVHVGPMRPTSRGWIKLKSKSPQDHPLIQPNYLSTEIDRWEMRQSVRLSREIFEQAAFDSLR----DGELVPG---SQVQSDDQLDQFIRAKSDSAYHPSCTCKMGSAQDNMTVVDPTTRVVGVDNLRVVDASIMPSVASGNLNAPTIMLAERAADII 492 + + +W Y T PQ C V WPRGRV GGSS LN M+Y+RG+ DYD W +G GW+Y L YFKK++ ++ + Y + L + F+E G + G+ D NG Q G TI G R S + A+LRP R N+ N V +V+ D R A G+ + +NG +V+ +++I+S GAINS QLLMLSG+G HL+++ IP++Q +P +G+NL DH + +PI+L+ Q + L++ TGP T G A E+ PDI FHF G V D GRQ + F + +RP S+G I+LKSK+P + P++ Y + D + + ++ + + AF D +PG S + +D R + + YH S T KMG D +VV+ +V GV LRV+D SI+P + SGN NAP IM+ ER AD+I Sbjct: 120 EGRMDWQYKTEPQPGRACLGHVNGQCNWPRGRVIGGSSVLNYMLYVRGNRKDYDIWANDGNPGWDYNNVLHYFKKSEDNR---NPYLAAT----------KTPLATAFVEGGVEMGYE-NRDCNGEFQTGFMLPQGTIRRGSRCSTSKAFLRPIRHRNNLXIAKNAYVMKVLIDPSRKTAYGVRFRRNGRVFEVHARKEVIMSAGAINSAQLLMLSGIGPGWHLQNLGIPIIQDLP-IGENLMDHYGTGALTFTIDQPISLV--QSRYENLPSILKYAIFGTGPL-TVLGGVEGLAWVPTKFENRTEDWPDIEFHFASGSVASDGGRQIRKVHGLSDSVWKMFRPLAYKDTFSILPMLLRPKSKGTIRLKSKNPFEKPIVNAGYFTHPDDMKVLVEGIKFGLALAQTKAFKKFGARFWDKVPMPGCENSPLWTDSYWAXIXRQYTTTIYHYSGTAKMGPPHDPSSVVNHELKVYGVKGLRVIDXSIIPKIPSGNTNAPVIMIGERGADLI 611
BLAST of choline mitochondrial vs. L. salmonis genes
Match: EMLSAG00000005902 (supercontig:LSalAtl2s:LSalAtl2s319:39372:42896:1 gene:EMLSAG00000005902 transcript:EMLSAT00000005902 description:"snap_masked-LSalAtl2s319-processed-gene-0.21") HSP 1 Score: 178.718 bits (452), Expect = 3.502e-50 Identity = 137/393 (34.86%), Postives = 195/393 (49.62%), Query Frame = 0 Query: 25 YNWYYHTLPQ-EHCDNRV---MYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGA---DT-YRGESGPLHVSRRNWNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALG-RPNIKTEVNVMVTRVIFDGKRAI--GIEYEQNGEKQQVYG-QDIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHLELYVVQKCKKPITLLG---AQQGASM-------IKVGLEWFYNQTGP-ARTAHLESGGFARSRPDLEHPDIMFHF----LPGQVVDHGRQTPDTEAF-------------QVHVGP--MRPTSRGWIKLKSKSPQDHPLIQPNYLS 375 Y+W + T Q E C + WPRG++ GG++ +N M+Y+RG+ D+D WE G EGW Y LPYFKK++ QLG DT + G G + VS + + V+ E Q AG P+ D N Q G +T+ G R +Y+ P + RPN+K VT+++FD + I G+E + G+ V ++IILS GAI SP +LM SGVG A HLK ++IP+V+ +P VG NLQDH+ T+LG Q AS ++F + GP + T ++ GF L ++ HF L H R+T + ++ + V P +RP SRG I+L S P PLI PNYLS Sbjct: 100 YDWSFETEKQDEACKGMIGNRCKWPRGKMLGGTAGMNYMLYVRGNKRDFDEWEEMGFEGWGYEKVLPYFKKSEL-QLGRYAHDTKHHGTEGNVPVSDSIYITPMAKVYKELAQLAGLPI-RDYNAENQTGFDIPQLTMRNGWRGDPYRSYIEPIMNKRPNLKILTYSHVTKLLFDDNKKIVTGVELLRFGKTYNVSASKEIILSAGAIGSPTILMHSGVGHAQHLKDLNIPLVKDLP-VGDNLQDHIT-----------TMLGPLLVNQSASFDVIETMSFSTMWDYFVHGKGPLSTTVAVDFNGF------LVDENVQLHFIGVPLYADYGLHSRKTFNIDSTLWDDYFSKLYGLSSISVLPALLRPKSRGTIRLSSSDPLASPLINPNYLS 472
BLAST of choline mitochondrial vs. L. salmonis genes
Match: EMLSAG00000013076 (supercontig:LSalAtl2s:LSalAtl2s9:868318:874523:1 gene:EMLSAG00000013076 transcript:EMLSAT00000013076 description:"snap_masked-LSalAtl2s9-processed-gene-8.14") HSP 1 Score: 131.339 bits (329), Expect = 6.144e-35 Identity = 70/203 (34.48%), Postives = 114/203 (56.16%), Query Frame = 0 Query: 20 LCDDKYNWYYHTLPQEH------CDNRVMYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGADT-----YRGESGPLHVSRRNWNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGKRAIGIEYEQNGEKQQVYGQ 211 L ++W+Y + QEH D + W RGRV GG+ ++N M+Y+RG+ +DYD W G EGW++ LP+F+K ++ + G D + G GP+ + + L FL AG+ G+P++ D N Y Q G TI +G+RW+++ AYL P PN+K +N V ++I K+A+GI+ +NG+ ++Y + Sbjct: 47 LYGSPHSWHYLSEDQEHNQALLGYDGKKSIWWRGRVIGGTGAINTMIYMRGNRHDYDHWALLGNEGWSFSDVLPFFRKLENVK-GTDLEKDVQFHGTEGPMKIEYGSQVTPLQKGFLNAGKLLGYPIS-DPNSYNQFGFSKILFTIKDGQRWTSSDAYLHPE--NPNLKVSINSHVLKIIIKHKKAMGIDMIKNGKIHRIYAK 245
BLAST of choline mitochondrial vs. L. salmonis genes
Match: EMLSAG00000006921 (supercontig:LSalAtl2s:LSalAtl2s391:573638:588537:1 gene:EMLSAG00000006921 transcript:EMLSAT00000006921 description:"maker-LSalAtl2s391-snap-gene-5.42") HSP 1 Score: 82.0333 bits (201), Expect = 5.709e-17 Identity = 42/109 (38.53%), Postives = 70/109 (64.22%), Query Frame = 0 Query: 154 IHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGK--RAIGIEYEQNGEKQQVYG-QDIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHL 259 I++GKR+S AYL+P L R N+ +N V ++ F K ++ I +++ G+ ++ + +IL+GGAIN+P+LL SGVG D + +++ +V+ +P VG LQDHL Sbjct: 157 IYKGKRFSNFDAYLKPVLNRKNLHVLINTEVIKIDFKDKSPESLHITHQKEGKTIKLNKIKKLILAGGAINTPKLLFESGVGPKDQINKLNVTLVEDIP-VGNELQDHL 264
BLAST of choline mitochondrial vs. SwissProt
Match: gi|42558900|sp|Q8BJ64.1|CHDH_MOUSE (RecName: Full=Choline dehydrogenase, mitochondrial; Short=CDH; Short=CHD; Flags: Precursor) HSP 1 Score: 721.465 bits (1861), Expect = 0.000e+0 Identity = 335/511 (65.56%), Postives = 404/511 (79.06%), Query Frame = 0 Query: 1 LDSKMMQWKIHMPAALMYNLCDDKYNWYYHTLPQEHCDNRVMYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGADTYRGESGPLHVSRRNWNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGKRAIGIEYEQNGEKQQVY-GQDIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHLELYVVQKCKKPITLLGAQQGASMIKVGLEWFYNQTGPARTAHLESGGFARSRPDLEHPDIMFHFLPGQVVDHGRQTPDTEAFQVHVGPMRPTSRGWIKLKSKSPQDHPLIQPNYLSTEIDRWEMRQSVRLSREIFEQAAFDSLRDGELVPGSQVQSDDQLDQFIRAKSDSAYHPSCTCKMGSAQDNMTVVDPTTRVVGVDNLRVVDASIMPSVASGNLNAPTIMLAERAADIILGRDLLTPNAVPVFETDT 510 + SK +QWKIHMPAAL+ NLCDDKYNWYYHT PQ D+RV+YWPRGRVWGGSSSLNAMVYIRGHA DY+RW REGAEGW+Y CLPYF+KAQ H+LGA+ YRG GPLHVSR N+ LH FL+A +QAG+P TED+NG+QQ G GW DMT+H+GKRWS A AYL P L RPN++ EV +V+RV+F+G RA+G+EY ++G++ + Y +++ILSGGAINSPQLLMLSGVG+AD L+ +DIPVV H+PGVGQNLQDHLE+YV Q C +PITL AQ+ + +GLEW ++ TG TAHLE+GGF RSRP + HPDI FHFLP QV+DHGR+ EA+QVHVG MR TS GW+KL+S +P+DHP+I PNYLSTE D + RQ VRLSREIF Q A R EL PGS VQSD ++D F+RAK+DSAYHPSCTCKMG + D VVD T+V+GV+NLRVVDASIMPSV SGNLNAPT+M+AE+AADII G L VPV++ T Sbjct: 81 MGSKRLQWKIHMPAALVSNLCDDKYNWYYHTEPQPGMDSRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHREGAEGWDYAHCLPYFRKAQRHELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTEDMNGFQQEGFGWMDMTVHQGKRWSTACAYLHPVLSRPNLRAEVQTLVSRVLFEGTRAVGVEYIKDGQRHKAYVSREVILSGGAINSPQLLMLSGVGNADDLRKLDIPVVCHLPGVGQNLQDHLEVYVQQACTQPITLHSAQKPLRKVCIGLEWLWSYTGDGATAHLETGGFIRSRPGVPHPDIQFHFLPSQVIDHGRKPTQQEAYQVHVGTMRATSVGWLKLRSANPRDHPVIHPNYLSTETDVEDFRQCVRLSREIFAQEALAPFRGKELQPGSHVQSDKEIDAFVRAKADSAYHPSCTCKMGRSSDPTAVVDAQTKVIGVENLRVVDASIMPSVVSGNLNAPTVMIAEKAADIIKGHPALEDKNVPVYKPQT 591
BLAST of choline mitochondrial vs. SwissProt
Match: gi|81885843|sp|Q6UPE0.1|CHDH_RAT (RecName: Full=Choline dehydrogenase, mitochondrial; Short=CDH; Short=CHD; Flags: Precursor) HSP 1 Score: 719.539 bits (1856), Expect = 0.000e+0 Identity = 335/511 (65.56%), Postives = 401/511 (78.47%), Query Frame = 0 Query: 1 LDSKMMQWKIHMPAALMYNLCDDKYNWYYHTLPQEHCDNRVMYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGADTYRGESGPLHVSRRNWNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGKRAIGIEYEQNGEKQQVY-GQDIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHLELYVVQKCKKPITLLGAQQGASMIKVGLEWFYNQTGPARTAHLESGGFARSRPDLEHPDIMFHFLPGQVVDHGRQTPDTEAFQVHVGPMRPTSRGWIKLKSKSPQDHPLIQPNYLSTEIDRWEMRQSVRLSREIFEQAAFDSLRDGELVPGSQVQSDDQLDQFIRAKSDSAYHPSCTCKMGSAQDNMTVVDPTTRVVGVDNLRVVDASIMPSVASGNLNAPTIMLAERAADIILGRDLLTPNAVPVFETDT 510 + SK +QWKIHMPAAL+ NLCDDKYNWYYHT Q D RV+YWPRGRVWGGSSSLNAMVYIRGHA DY+RW R+GAEGW+Y CLPYF+KAQ H+LGA+ YRG GPLHVSR N+ LH FL+A +QAG+P TED+NG+QQ G GW DMTIH+GKRWS ASAYLRPAL RPN++ EV +V+RV+F+G RA+G+EY ++G+ + Y +++ILSGGAINSPQLLMLSGVG+AD LK + IPVV H+PGVGQNLQDHLE+Y+ C +PITL AQ+ + +GLEW + TG TAHLE+GGF RSRP + HPDI FHFLP QV+DHGR+ EA+QVHVG MR TS GW+KL+S +PQDHP+I PNYLSTE D + RQ V+L+REIF Q AF R EL PGS VQSD ++D F+RAK+DSAYHPSCTCKMG D VVD TRV+GV+NLRV+DASIMPSV SGNLNAPTIM+AE+AAD+I G L VPV++ T Sbjct: 84 MGSKRLQWKIHMPAALVANLCDDKYNWYYHTEAQPGLDGRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHRQGAEGWDYAHCLPYFRKAQKHELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTEDMNGFQQEGFGWMDMTIHQGKRWSTASAYLRPALSRPNLRAEVQTLVSRVLFEGTRAVGVEYIKDGQSHKAYVSREVILSGGAINSPQLLMLSGVGNADDLKKLGIPVVCHLPGVGQNLQDHLEIYIQHACTQPITLHSAQKPLRKVCIGLEWLWRFTGDGATAHLETGGFIRSRPGVPHPDIQFHFLPSQVIDHGRKPTQQEAYQVHVGTMRATSVGWLKLRSTNPQDHPMINPNYLSTETDVEDFRQCVKLTREIFAQEAFAPFRGKELQPGSHVQSDKEIDAFVRAKADSAYHPSCTCKMGQPSDPTAVVDQQTRVIGVENLRVIDASIMPSVVSGNLNAPTIMIAEKAADVIKGCPALGDENVPVYKPQT 594
BLAST of choline mitochondrial vs. SwissProt
Match: gi|229462828|sp|Q8NE62.2|CHDH_HUMAN (RecName: Full=Choline dehydrogenase, mitochondrial; Short=CDH; Short=CHD; Flags: Precursor) HSP 1 Score: 711.064 bits (1834), Expect = 0.000e+0 Identity = 332/509 (65.23%), Postives = 396/509 (77.80%), Query Frame = 0 Query: 3 SKMMQWKIHMPAALMYNLCDDKYNWYYHTLPQEHCDNRVMYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGADTYRGESGPLHVSRRNWNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGKRAIGIEYEQNGEKQQVYG-QDIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHLELYVVQKCKKPITLLGAQQGASMIKVGLEWFYNQTGPARTAHLESGGFARSRPDLEHPDIMFHFLPGQVVDHGRQTPDTEAFQVHVGPMRPTSRGWIKLKSKSPQDHPLIQPNYLSTEIDRWEMRQSVRLSREIFEQAAFDSLRDGELVPGSQVQSDDQLDQFIRAKSDSAYHPSCTCKMGSAQDNMTVVDPTTRVVGVDNLRVVDASIMPSVASGNLNAPTIMLAERAADIILGRDLLTPNAVPVFETDT 510 SK + WKIHMPAAL+ NLCDD+YNW YHT Q D RV+YWPRGRVWGGSSSLNAMVY+RGHA DY+RW+R+GA GW+Y CLPYF+KAQ H+LGA YRG GPL VSR N+ LH FLEA QQAG+PLTED+NG+QQ G GW DMTIHEGKRWSAA AYL PAL R N+K E +V+RV+F+G RA+G+EY +NG+ + Y +++ILSGGAINSPQLLMLSG+G+AD LK + IPVV H+PGVGQNLQDHLE+Y+ Q C +PITL AQ+ + +GLEW + TG TAHLE+GGF RS+P + HPDI FHFLP QV+DHGR EA+QVHVGPMR TS GW+KL+S +PQDHP+IQPNYLSTE D + R V+L+REIF Q A R EL PGS +QSD ++D F+RAK+DSAYHPSCTCKMG D VVDP TRV+GV+NLRVVDASIMPS+ SGNLNAPTIM+AE+AADII G+ L VPV++ T Sbjct: 81 SKRLSWKIHMPAALVANLCDDRYNWCYHTEVQRGLDGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQGARGWDYAHCLPYFRKAQGHELGASRYRGADGPLRVSRGKTNHPLHCAFLEATQQAGYPLTEDMNGFQQEGFGWMDMTIHEGKRWSAACAYLHPALSRTNLKAEAETLVSRVLFEGTRAVGVEYVKNGQSHRAYASKEVILSGGAINSPQLLMLSGIGNADDLKKLGIPVVCHLPGVGQNLQDHLEIYIQQACTRPITLHSAQKPLRKVCIGLEWLWKFTGEGATAHLETGGFIRSQPGVPHPDIQFHFLPSQVIDHGRVPTQQEAYQVHVGPMRGTSVGWLKLRSANPQDHPVIQPNYLSTETDIEDFRLCVKLTREIFAQEALAPFRGKELQPGSHIQSDKEIDAFVRAKADSAYHPSCTCKMGQPSDPTAVVDPQTRVLGVENLRVVDASIMPSMVSGNLNAPTIMIAEKAADIIKGQPALWDKDVPVYKPRT 589
BLAST of choline mitochondrial vs. SwissProt
Match: gi|42558867|sp|Q8G1Z8.1|BETA_BRUSU (RecName: Full=Oxygen-dependent choline dehydrogenase; Short=CDH; Short=CHD; AltName: Full=Betaine aldehyde dehydrogenase; Short=BADH) HSP 1 Score: 498.819 bits (1283), Expect = 1.003e-171 Identity = 239/491 (48.68%), Postives = 327/491 (66.60%), Query Frame = 0 Query: 10 IHMPAALMYNLCDDKYNWYYHTLPQEHCDNRVMYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGADTYRGESGPLHVSRRNWNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGKRAIGIEYEQNGEKQQVYGQ-DIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHLELYVVQKCKKPITLLGAQQGASMIKVGLEWFYNQTGPARTAHLESGGFARSRPDLEHPDIMFHFLPGQVVDHGRQTPDTEAFQVHVGPMRPTSRGWIKLKSKSPQDHPLIQPNYLSTEIDRWEMRQSVRLSREIFEQAAFDSLRDGELVPGSQVQSDDQLDQFIRAKSDSAYHPSCTCKMGSAQDNMTVVDPTTRVVGVDNLRVVDASIMPSVASGNLNAPTIMLAERAADIILGRDLLT 499 I MPAAL + + + Y+W + + P+ H R + PRG+V GGSSS+N MVY+RGHA D+D W + GA GW Y LPYFK+ ++ Q G + +RG +GPL+V R +N L F+EAG QAG +T+D NG +Q G G + TIH G+RWSAA+AYL+PAL RPN+K V +++ +GKRA+G+E E + + ++I++ +INSP+LLMLSG+G A HLK I +V PGVGQNLQDHLE+Y+ Q+C +PITL S ++G+EW +TG T H ES F RS+ +E+PDI +HFLP + G+ + FQ HVGPMR SRG + L+S +P++ P+I+ NY+S E D + R VRL+REIF QAAFD R E+ PG+ VQ+DD++D FIR +SA+HP TCKMG+ D M VVDP RV+GV+ LRV D+SI P + +GNLN P+IM+ E+A+D ILGR L Sbjct: 43 IQMPAALSFPMNMETYDWGFSSEPEPHIGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYADVLPYFKRMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNGEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKL-VKGFARKIVLEGKRAVGVEIEAGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDHLEVYIQQECTQPITLYSELNLFSKARIGVEWLLFKTGDGATNHFESAAFVRSKAGVEYPDIQYHFLPVAIRYDGKAAAQSHGFQAHVGPMRSKSRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYRGAEIQPGAHVQTDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADSSIFPRITNGNLNGPSIMVGEKASDHILGRTPLA 532
BLAST of choline mitochondrial vs. SwissProt
Match: gi|166224130|sp|A5VPA6.1|BETA_BRUO2 (RecName: Full=Oxygen-dependent choline dehydrogenase; Short=CDH; Short=CHD; AltName: Full=Betaine aldehyde dehydrogenase; Short=BADH >gi|189081405|sp|B0CKN4.1|BETA_BRUSI RecName: Full=Oxygen-dependent choline dehydrogenase; Short=CDH; Short=CHD; AltName: Full=Betaine aldehyde dehydrogenase; Short=BADH) HSP 1 Score: 498.819 bits (1283), Expect = 1.155e-171 Identity = 239/491 (48.68%), Postives = 327/491 (66.60%), Query Frame = 0 Query: 10 IHMPAALMYNLCDDKYNWYYHTLPQEHCDNRVMYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGADTYRGESGPLHVSRRNWNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGKRAIGIEYEQNGEKQQVYGQ-DIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHLELYVVQKCKKPITLLGAQQGASMIKVGLEWFYNQTGPARTAHLESGGFARSRPDLEHPDIMFHFLPGQVVDHGRQTPDTEAFQVHVGPMRPTSRGWIKLKSKSPQDHPLIQPNYLSTEIDRWEMRQSVRLSREIFEQAAFDSLRDGELVPGSQVQSDDQLDQFIRAKSDSAYHPSCTCKMGSAQDNMTVVDPTTRVVGVDNLRVVDASIMPSVASGNLNAPTIMLAERAADIILGRDLLT 499 I MPAAL + + + Y+W + + P+ H R + PRG+V GGSSS+N MVY+RGHA D+D W + GA GW Y LPYFK+ ++ Q G + +RG +GPL+V R +N L F+EAG QAG +T+D NG +Q G G + TIH G+RWSAA+AYL+PAL RPN+K V +++ +GKRA+G+E E + + ++I++ +INSP+LLMLSG+G A HLK I +V PGVGQNLQDHLE+Y+ Q+C +PITL S ++G+EW +TG T H ES F RS+ +E+PDI +HFLP + G+ + FQ HVGPMR SRG + L+S +P++ P+I+ NY+S E D + R VRL+REIF QAAFD R E+ PG+ VQ+DD++D FIR +SA+HP TCKMG+ D M VVDP RV+GV+ LRV D+SI P + +GNLN P+IM+ E+A+D ILGR L Sbjct: 43 IQMPAALSFPMNMETYDWGFSSEPEPHIGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYADVLPYFKRMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNGEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKL-VKGFARKIVLEGKRAVGVEIEAGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDHLEVYIQQECTQPITLYSKLNLFSKARIGVEWLLFKTGDGATNHFESAAFVRSKAGVEYPDIQYHFLPVAIRYDGKAAAQSHGFQAHVGPMRSKSRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYRGAEIQPGAHVQTDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADSSIFPRITNGNLNGPSIMVGEKASDHILGRTPLA 532
BLAST of choline mitochondrial vs. SwissProt
Match: gi|189081404|sp|A9M9H8.1|BETA_BRUC2 (RecName: Full=Oxygen-dependent choline dehydrogenase; Short=CDH; Short=CHD; AltName: Full=Betaine aldehyde dehydrogenase; Short=BADH) HSP 1 Score: 496.893 bits (1278), Expect = 5.716e-171 Identity = 238/491 (48.47%), Postives = 326/491 (66.40%), Query Frame = 0 Query: 10 IHMPAALMYNLCDDKYNWYYHTLPQEHCDNRVMYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGADTYRGESGPLHVSRRNWNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGKRAIGIEYEQNGEKQQVYGQ-DIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHLELYVVQKCKKPITLLGAQQGASMIKVGLEWFYNQTGPARTAHLESGGFARSRPDLEHPDIMFHFLPGQVVDHGRQTPDTEAFQVHVGPMRPTSRGWIKLKSKSPQDHPLIQPNYLSTEIDRWEMRQSVRLSREIFEQAAFDSLRDGELVPGSQVQSDDQLDQFIRAKSDSAYHPSCTCKMGSAQDNMTVVDPTTRVVGVDNLRVVDASIMPSVASGNLNAPTIMLAERAADIILGRDLLT 499 I MPAAL + + + Y+W + + P+ H R + PRG+V GGSSS+N MVY+RGHA D+D W + GA GW Y LPYFK+ ++ Q G + +RG +GPL+V R +N L F+EAG QAG + +D NG +Q G G + TIH G+RWSAA+AYL+PAL RPN+K V +++ +GKRA+G+E E + + ++I++ +INSP+LLMLSG+G A HLK I +V PGVGQNLQDHLE+Y+ Q+C +PITL S ++G+EW +TG T H ES F RS+ +E+PDI +HFLP + G+ + FQ HVGPMR SRG + L+S +P++ P+I+ NY+S E D + R VRL+REIF QAAFD R E+ PG+ VQ+DD++D FIR +SA+HP TCKMG+ D M VVDP RV+GV+ LRV D+SI P + +GNLN P+IM+ E+A+D ILGR L Sbjct: 43 IQMPAALSFPMNMETYDWGFSSEPEPHIGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYADVLPYFKRMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVADDYNGEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKL-VKGFARKIVLEGKRAVGVEIEAGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDHLEVYIQQECTQPITLYSELNLFSKARIGVEWLLFKTGDGATNHFESAAFVRSKAGVEYPDIQYHFLPVAIRYDGKAAAQSHGFQAHVGPMRSKSRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYRGAEIQPGAHVQTDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADSSIFPRITNGNLNGPSIMVGEKASDHILGRTPLA 532
BLAST of choline mitochondrial vs. SwissProt
Match: gi|42558875|sp|Q8YFY2.2|BETA_BRUME (RecName: Full=Oxygen-dependent choline dehydrogenase; Short=CDH; Short=CHD; AltName: Full=Betaine aldehyde dehydrogenase; Short=BADH) HSP 1 Score: 496.123 bits (1276), Expect = 1.224e-170 Identity = 238/491 (48.47%), Postives = 326/491 (66.40%), Query Frame = 0 Query: 10 IHMPAALMYNLCDDKYNWYYHTLPQEHCDNRVMYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGADTYRGESGPLHVSRRNWNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGKRAIGIEYEQNGEKQQVYGQ-DIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHLELYVVQKCKKPITLLGAQQGASMIKVGLEWFYNQTGPARTAHLESGGFARSRPDLEHPDIMFHFLPGQVVDHGRQTPDTEAFQVHVGPMRPTSRGWIKLKSKSPQDHPLIQPNYLSTEIDRWEMRQSVRLSREIFEQAAFDSLRDGELVPGSQVQSDDQLDQFIRAKSDSAYHPSCTCKMGSAQDNMTVVDPTTRVVGVDNLRVVDASIMPSVASGNLNAPTIMLAERAADIILGRDLLT 499 I MPAAL + + + Y+W + + P+ H R + PRG+V GGSSS+N MVY+RGHA D+D W + GA GW Y LPYFK+ ++ Q G + +RG +GPL+V R +N L F+EAG QAG +T+D NG +Q G G + TIH G+RWSAA+AYL+PAL RPN+K V +++ +GKRA+G+E E + + ++I++ +INSP+LLMLSG+G A HLK I +V PGVGQNLQDHLE+Y+ Q+C +PITL S ++G+EW +TG T H ES F RS+ +E+PDI +HFLP + G+ + FQ HVGPMR SRG + L+S +P++ P+I+ NY+S E D + R VRL+REIF QAAFD R E+ PG+ VQ+DD++D FIR +SA+HP TCKMG+ D M VVDP RV+GV+ LRV D+SI P + +GNLN P+IM+ E+A+ ILGR L Sbjct: 43 IQMPAALSFPMNMETYDWGFSSEPEPHIRGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYADVLPYFKRMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNGEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKL-VKGFARKIVLEGKRAVGVEIEAGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQDHLEVYIQQECTQPITLYSKLNLFSKARIGVEWLLFKTGDGATNHFESAAFVRSKAGVEYPDIQYHFLPVAIRYDGKAAAQSHGFQAHVGPMRSKSRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYRGAEIQPGAHVQTDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADSSIFPRITNGNLNGPSIMVGEKASGHILGRTPLA 532
BLAST of choline mitochondrial vs. SwissProt
Match: gi|166224135|sp|A6X2G7.1|BETA_OCHA4 (RecName: Full=Oxygen-dependent choline dehydrogenase; Short=CDH; Short=CHD; AltName: Full=Betaine aldehyde dehydrogenase; Short=BADH) HSP 1 Score: 495.738 bits (1275), Expect = 1.489e-170 Identity = 238/491 (48.47%), Postives = 324/491 (65.99%), Query Frame = 0 Query: 10 IHMPAALMYNLCDDKYNWYYHTLPQEHCDNRVMYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGADTYRGESGPLHVSRRNWNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGKRAIGIEYEQNGEKQQVYGQ-DIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHLELYVVQKCKKPITLLGAQQGASMIKVGLEWFYNQTGPARTAHLESGGFARSRPDLEHPDIMFHFLPGQVVDHGRQTPDTEAFQVHVGPMRPTSRGWIKLKSKSPQDHPLIQPNYLSTEIDRWEMRQSVRLSREIFEQAAFDSLRDGELVPGSQVQSDDQLDQFIRAKSDSAYHPSCTCKMGSAQDNMTVVDPTTRVVGVDNLRVVDASIMPSVASGNLNAPTIMLAERAADIILGRDLLT 499 I MPAAL + + + Y+W + T P+ H R + PRG+V GGSSS+N MVY+RGHA DYD W GA GW Y LPYFK+ ++ G + +RG +GPL++ R +N L F+EAG +AG +TED NG +Q G G + TIH G+RWSAA+AYL+PAL RPN+K V + +++ +GKRA+G+E E + + ++I++ +INSP+LLMLSG+G A LK I VV PGVGQNLQDHLE+Y+ Q+C +PITL S K+G EW + +TG T H ES F RS+ +E+PDI +HFLP + G+ + FQ HVGPMR SRG + L+S +P++ P+I+ NY+S E D + R VRL+REIF QAAF+ R E+ PG+ VQSDD++D FI+ +SA+HP TCKMG+ D M VVD RV+GV+ LRV D+SI P + +GNLN P+IM+ E+A+D ILGR L Sbjct: 43 IQMPAALSFPMNMETYDWGFSTEPEPHIGGRSLVTPRGKVLGGSSSINGMVYVRGHARDYDHWSESGARGWAYADVLPYFKRMENSSGGQEGWRGTNGPLYIQRGKRDNPLFHAFVEAGHEAGFEVTEDYNGEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKL-VKGLARKIVLEGKRAVGVEIEAGRSFSTIRARREVIIAASSINSPKLLMLSGIGPAAQLKEHGIEVVADRPGVGQNLQDHLEVYIQQECTQPITLYSKLNLFSKAKIGAEWLFFKTGDGATNHFESAAFLRSKAGVEYPDIQYHFLPVAIRYDGKAAAQSHGFQAHVGPMRSKSRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFNPYRGAEIQPGAHVQSDDEIDNFIKEHVESAFHPCGTCKMGAVDDPMAVVDAECRVIGVEGLRVADSSIFPRITNGNLNGPSIMVGEKASDHILGRTPLA 532
BLAST of choline mitochondrial vs. SwissProt
Match: gi|42558878|sp|Q985M5.1|BETA_RHILO (RecName: Full=Oxygen-dependent choline dehydrogenase; Short=CDH; Short=CHD; AltName: Full=Betaine aldehyde dehydrogenase; Short=BADH) HSP 1 Score: 493.426 bits (1269), Expect = 1.326e-169 Identity = 245/493 (49.70%), Postives = 324/493 (65.72%), Query Frame = 0 Query: 10 IHMPAALMYNLCDDKYNWYYHTLPQEHCDNRVMYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGADTYRGESGPLHVSRRNWNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGKRAIGIEYEQNGEKQQVYGQ-DIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHLELYVVQKCKKPITLLGAQQGASMIKVGLEWFYNQTGPARTAHLESGGFARSRPDLEHPDIMFHFLPGQVVDHGRQTPDTEAFQVHVGPMRPTSRGWIKLKSKSPQDHPLIQPNYLSTEIDRWEMRQSVRLSREIFEQAAFDSLRDGELVPGSQVQSDDQLDQFIRAKSDSAYHPSCTCKMGSAQDNMTVVDPTTRVVGVDNLRVVDASIMPSVASGNLNAPTIMLAERAADIILGRDLLTPN 501 I MP+AL L Y+W + + P+ H RV+ PRG+V GGSSS+N MVY+RGHA D+D W EGA GW + LPYFK+ + + G D +RG GPLHV R + N L+ F+EAG+QAG LT+D NG +Q G G + TI G+RWSAASAYL+PAL R N+ V RVI + +RAIG+E E + + Q V + ++I++ +INSP++LMLSG+G A+HL+ I VV PGVG+NLQDH+ELY+ Q+ KPITL S +G +W + ++G T H E+ F RSR +++PDI +HF+P V G+ + FQ HVGPMR SRG + L+S P+ P+I+ NY+S D E R +RL+REIF Q+AFD+ R E+ PGS VQSDD LD FIR ++SAYHP TCKMG A D +VVDP RV+GVD LRV D+SI P V +GNLNAP+IM E+A+D ILGR L P+ Sbjct: 44 IQMPSALSIPLNMSLYDWGFASEPEPHLGGRVLATPRGKVIGGSSSINGMVYVRGHARDFDHWAEEGATGWGFADVLPYFKRMEDNDGGEDGWRGHGGPLHVQRGSRKNPLYGAFVEAGRQAGFELTDDYNGSKQEGFGPMEQTISGGRRWSAASAYLKPALKRKNVSL-VKGFARRVIIENQRAIGVEIEAHKQIQVVKARREVIVAASSINSPKILMLSGIGPAEHLRENGIAVVADRPGVGRNLQDHMELYIQQESTKPITLNSVLNPFSKALIGAQWLFFKSGLGATNHFEAAAFVRSRAGVDYPDIQYHFIPAAVRYDGKAAAKSHGFQAHVGPMRSKSRGSVTLRSPDPKAKPVIRFNYMSHPDDWTEFRHCIRLTREIFGQSAFDAFRGQEISPGSHVQSDDDLDVFIRDHAESAYHPCGTCKMGRADDVTSVVDPECRVIGVDGLRVADSSIFPRVTNGNLNAPSIMTGEKASDHILGRTPLAPS 535
BLAST of choline mitochondrial vs. SwissProt
Match: gi|166224142|sp|A7N2P9.1|BETA_VIBCB (RecName: Full=Oxygen-dependent choline dehydrogenase; Short=CDH; Short=CHD; AltName: Full=Betaine aldehyde dehydrogenase; Short=BADH) HSP 1 Score: 480.715 bits (1236), Expect = 2.707e-164 Identity = 241/514 (46.89%), Postives = 326/514 (63.42%), Query Frame = 0 Query: 10 IHMPAALMYNLCDDKYNWYYHTLPQEHCDNRVMYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGADTYRGESGPLHVSRRN--WNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGKRAIGIEYEQNGEKQQVYG-QDIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHLELYVVQKCKKPITLLGAQQGASMIKVGLEWFYNQTGPARTAHLESGGFARSRPDLEHPDIMFHFLPGQVVDHGRQTPDTEAFQVHVGPMRPTSRGWIKLKSKSPQDHPLIQPNYLSTEIDRWEMRQSVRLSREIFEQAAFDSLRDGELVPGSQVQSDDQLDQFIRAKSDSAYHPSCTCKMGSAQDNMTVVDPTTRVVGVDNLRVVDASIMPSVASGNLNAPTIMLAERAADIILGRDLLTPNAVPVFETDTKRSNLNVRKP 520 I MP AL Y + +KY W + T+ +E D R ++ PRG+V GGSSS+N MVY+RGHA D+D WE EGA+GWNY CLPYF+KA++ GAD YRG SGP+ N N L+ F+EAG+ AG+P T+D NGYQQ G G MT+ +G R S ++AYL A R N V R++ +GK+A+GIE+EQ+GE +Q + ++++ S G+I S QLL LSG+G L I V + GVG+NLQDHLE+Y CK+PITL S +G EW + G T H ES F RSR L+ P+I FHFLP + GR D FQVHVGP +P SRG +++ S +P D P I+ NY+STE D+ + R +RL+REI Q A D+ R E+ PG + SD+ + ++++ +SAYHPSC+CKMGS D M V++ +V G++ LRVVD+SI P++ +GNLNAPTIM+AERAAD+ILG L N PV+ + +R P Sbjct: 45 IQMPTALSYPMNTEKYAWQFETVAEEGLDGRQLHCPRGKVLGGSSSINGMVYVRGHACDFDEWEAEGAKGWNYQACLPYFRKAETWTGGADEYRGGSGPVGTCNGNDMKLNPLYQAFIEAGKDAGYPETQDYNGYQQEGFGPMHMTVDKGVRASTSNAYLSRAKKRSNFTLMKGVTAHRILLEGKKAVGIEFEQSGEIKQCFANKEVVSSAGSIGSVQLLQLSGIGPKTVLDKAGIEVKHTLEGVGKNLQDHLEVYFQYHCKQPITLNSKLGLISKGLIGTEWILTRKGLGATNHFESCAFIRSREGLKSPNIQFHFLPAAMRYDGRAAFDGHGFQVHVGPNKPESRGSVEVVSANPNDKPKIEFNYISTEQDKQDWRDCIRLTREILNQPAMDAFRGEEIQPGLNITSDEAIGEWVKQNVESAYHPSCSCKMGSNDDPMAVLNEACQVRGIEGLRVVDSSIFPTIPNGNLNAPTIMVAERAADMILGNTLEQSNNTPVWIAPNWQETQRMRPP 558
BLAST of choline mitochondrial vs. nr
Match: gi|1034220462|gb|ANI26486.1| (choline dehydrogenase [Sciaenops ocellatus]) HSP 1 Score: 769.229 bits (1985), Expect = 0.000e+0 Identity = 358/516 (69.38%), Postives = 420/516 (81.40%), Query Frame = 0 Query: 1 LDSKMMQWKIHMPAALMYNLCDDKYNWYYHTLPQEHCDNRVMYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGADTYRGESGPLHVSRRNWNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGKRAIGIEYEQNGEKQQVYG-QDIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHLELYVVQKCKKPITLLGAQQGASMIKVGLEWFYNQTGPARTAHLESGGFARSRPDLEHPDIMFHFLPGQVVDHGRQTPDTEAFQVHVGPMRPTSRGWIKLKSKSPQDHPLIQPNYLSTEIDRWEMRQSVRLSREIFEQAAFDSLRDGELVPGSQVQSDDQLDQFIRAKSDSAYHPSCTCKMGSAQDNMTVVDPTTRVVGVDNLRVVDASIMPSVASGNLNAPTIMLAERAADIILGRDLLTPNAVPVFE---TDTKR 512 L S + WKIHMPAAL YNLCDDKYNWYYHTLPQ H DNRV+YWPRGRVWGGSSSLNAMVYIRGHA DY+RW+REGAEGW+Y CLPYFKKAQ H+LG + YRG SGPLHVSR N+ LH F+EAGQQAG+P T+D+NGYQQ G+GW DMT+++GKRWS ASAYLRP LGRPN+KTEV + T+++FDG RA+G+EY QNGEK++V+ +++ILSGGAINSPQLLMLSGVG+AD LK +DIPVVQH+PGVG NLQDHLELY+ Q+C +PITL AQ+ M+K+GLEW TG TAHLESGGF RSRP + HPDI FHFLP QV+DHGR EA+QVHVGPMR TS GW+KLKS +P DHP++QPNYLST+ID WE R+ V+ SREIF Q AFD+ R E++PGSQVQSD +D F+R K+DSAYHPSCTCKMGS D M VVD TRV+GV+ LRVVDASIMPS+ SGNLNAPTIM+AE+ AD+I GR L AVPV+ DT+R Sbjct: 109 LGSLRLSWKIHMPAALTYNLCDDKYNWYYHTLPQTHMDNRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWQREGAEGWDYEHCLPYFKKAQCHELGENRYRGGSGPLHVSRGKTNHPLHKAFIEAGQQAGYPFTDDMNGYQQEGLGWMDMTVYKGKRWSTASAYLRPVLGRPNLKTEVRCLTTKILFDGNRAVGVEYTQNGEKKRVFADKEVILSGGAINSPQLLMLSGVGNADDLKQLDIPVVQHLPGVGSNLQDHLELYIQQQCTQPITLYKAQKPFHMVKIGLEWLTVFTGYGATAHLESGGFIRSRPHVPHPDIQFHFLPSQVIDHGRVASKIEAYQVHVGPMRSTSIGWLKLKSPNPLDHPILQPNYLSTDIDVWEFRECVKRSREIFTQKAFDAFRGPEVLPGSQVQSDADIDAFVRRKADSAYHPSCTCKMGSPSDPMAVVDSNTRVLGVERLRVVDASIMPSIVSGNLNAPTIMMAEKTADMIRGRPALVDQAVPVYRPPTLDTQR 624
BLAST of choline mitochondrial vs. nr
Match: gi|657584587|ref|XP_008296449.1| (PREDICTED: choline dehydrogenase, mitochondrial [Stegastes partitus]) HSP 1 Score: 769.229 bits (1985), Expect = 0.000e+0 Identity = 356/511 (69.67%), Postives = 419/511 (82.00%), Query Frame = 0 Query: 1 LDSKMMQWKIHMPAALMYNLCDDKYNWYYHTLPQEHCDNRVMYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGADTYRGESGPLHVSRRNWNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGKRAIGIEYEQNGEKQQVYGQ-DIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHLELYVVQKCKKPITLLGAQQGASMIKVGLEWFYNQTGPARTAHLESGGFARSRPDLEHPDIMFHFLPGQVVDHGRQTPDTEAFQVHVGPMRPTSRGWIKLKSKSPQDHPLIQPNYLSTEIDRWEMRQSVRLSREIFEQAAFDSLRDGELVPGSQVQSDDQLDQFIRAKSDSAYHPSCTCKMGSAQDNMTVVDPTTRVVGVDNLRVVDASIMPSVASGNLNAPTIMLAERAADIILGRDLLTPNAVPVFETDT 510 L S + WKIHMPAAL YNLCDDKYNWYYHTLPQ H DNRVMYWPRGRVWGGSSSLNAMVYIRGHA DY+RW+REGAEGW+Y CLPYF+KAQ H+LG + YRG SGPLHVSR N++LH F+EAGQQAG+P T+D+NGYQQ G+GW DMTI++GKRWS ASAYLRPALGRPN+KTEV + T+++FDG RA+G+EY QNG++++V+ + ++ILSGGAINSPQLLMLSGVG+AD LK + IPV+QH+PGVG NLQDHLELYV Q+C +PITL +Q+ M+K+GLEW TG TAHLESGGF RSRP + HPDI FHFLP QV+DHGR EA+QVHVGPMR TS GW+KLKS +P DHP++QPNYLST+ID WE R+SV+LSREIF Q AFD R E+ PG QVQSD +D F+R K+DSAYHPSCTCKMGS D VVDP TRV+G++ LRVVDASIMPSV SGNLNAPTIM+AE+AADII GR L + VPV++ T Sbjct: 117 LGSSRLSWKIHMPAALTYNLCDDKYNWYYHTLPQAHMDNRVMYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWQREGAEGWDYDHCLPYFRKAQCHELGENRYRGGSGPLHVSRGKTNHSLHKAFIEAGQQAGYPFTDDMNGYQQEGLGWMDMTIYKGKRWSTASAYLRPALGRPNLKTEVRCLTTKILFDGNRAVGVEYTQNGQQKRVFAEKEVILSGGAINSPQLLMLSGVGNADDLKQLGIPVIQHLPGVGSNLQDHLELYVQQQCTQPITLYKSQKLFHMVKIGLEWLTLFTGYGATAHLESGGFIRSRPGVTHPDIQFHFLPSQVIDHGRVASKIEAYQVHVGPMRSTSIGWMKLKSTNPLDHPILQPNYLSTDIDVWEFRESVKLSREIFAQKAFDPFRGPEVQPGPQVQSDADIDAFVRRKADSAYHPSCTCKMGSPSDPTAVVDPNTRVLGLERLRVVDASIMPSVVSGNLNAPTIMMAEKAADIIRGRPALVDSGVPVYQPPT 627
BLAST of choline mitochondrial vs. nr
Match: gi|974071190|ref|XP_015233270.1| (PREDICTED: choline dehydrogenase, mitochondrial [Cyprinodon variegatus] >gi|974071192|ref|XP_015233271.1| PREDICTED: choline dehydrogenase, mitochondrial [Cyprinodon variegatus]) HSP 1 Score: 768.074 bits (1982), Expect = 0.000e+0 Identity = 360/511 (70.45%), Postives = 414/511 (81.02%), Query Frame = 0 Query: 1 LDSKMMQWKIHMPAALMYNLCDDKYNWYYHTLPQEHCDNRVMYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGADTYRGESGPLHVSRRNWNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGKRAIGIEYEQNGEKQQVYG-QDIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHLELYVVQKCKKPITLLGAQQGASMIKVGLEWFYNQTGPARTAHLESGGFARSRPDLEHPDIMFHFLPGQVVDHGRQTPDTEAFQVHVGPMRPTSRGWIKLKSKSPQDHPLIQPNYLSTEIDRWEMRQSVRLSREIFEQAAFDSLRDGELVPGSQVQSDDQLDQFIRAKSDSAYHPSCTCKMGSAQDNMTVVDPTTRVVGVDNLRVVDASIMPSVASGNLNAPTIMLAERAADIILGRDLLTPNAVPVFETDT 510 L S + WKIHMPAAL YNLCDDKYNWYYHTLPQ H DNRVMYWPRGRVWGGSSSLNAMVYIRGHA DY+RW+REGAEGW+Y CLPYF+KAQ H+LG + YRG SGPLHVSR N+ LH F+EAGQQAG+P T+D+NGYQQ G+GW DMTI++GKRWS ASAYLRPAL RPN+KTEV + T+V+FDGKRA+G+EY QNGEK++V+ +++ILSGGAINSPQLLMLSGVG+AD LK + IP++QH+PGVG NLQDHLELYV Q+C +PITL AQ+ MIK+GLEW TG TAHLESGGF RSRP + HPDI FHFLP QV+DHGR EA+QVHVGPMR S GW+KLKS +P DHP++QPNYLST+ID WE RQ V+LSREIF Q AFD R E+ PG QVQSD +D F+R K+DSAYHPSCTCKMGSA D M VVD RV G++ LRVVDASIMPS+ SGNLNAPTIM+AERAADII GR L VPV+E T Sbjct: 90 LGSSRLSWKIHMPAALTYNLCDDKYNWYYHTLPQAHMDNRVMYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWQREGAEGWDYDHCLPYFRKAQCHELGENRYRGGSGPLHVSRGKTNHPLHKAFIEAGQQAGYPFTDDMNGYQQEGVGWMDMTIYKGKRWSTASAYLRPALSRPNLKTEVQCLTTKVLFDGKRAVGVEYVQNGEKKRVFADKEVILSGGAINSPQLLMLSGVGNADELKDLGIPIIQHLPGVGNNLQDHLELYVQQQCTQPITLYKAQKPFHMIKIGLEWLTLFTGYGATAHLESGGFIRSRPGVAHPDIQFHFLPSQVIDHGRVASKIEAYQVHVGPMRSVSVGWMKLKSPNPMDHPILQPNYLSTDIDVWEFRQCVKLSREIFAQRAFDPFRGTEVQPGPQVQSDADIDAFVRQKADSAYHPSCTCKMGSATDPMAVVDSNARVFGLERLRVVDASIMPSIVSGNLNAPTIMIAERAADIIRGRPPLEDQGVPVYEPPT 600
BLAST of choline mitochondrial vs. nr
Match: gi|1228989136|ref|XP_022059009.1| (choline dehydrogenase, mitochondrial [Acanthochromis polyacanthus]) HSP 1 Score: 767.303 bits (1980), Expect = 0.000e+0 Identity = 356/516 (68.99%), Postives = 421/516 (81.59%), Query Frame = 0 Query: 1 LDSKMMQWKIHMPAALMYNLCDDKYNWYYHTLPQEHCDNRVMYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGADTYRGESGPLHVSRRNWNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGKRAIGIEYEQNGEKQQVYGQ-DIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHLELYVVQKCKKPITLLGAQQGASMIKVGLEWFYNQTGPARTAHLESGGFARSRPDLEHPDIMFHFLPGQVVDHGRQTPDTEAFQVHVGPMRPTSRGWIKLKSKSPQDHPLIQPNYLSTEIDRWEMRQSVRLSREIFEQAAFDSLRDGELVPGSQVQSDDQLDQFIRAKSDSAYHPSCTCKMGSAQDNMTVVDPTTRVVGVDNLRVVDASIMPSVASGNLNAPTIMLAERAADIILGRDLLTPNAVPVFE---TDTKR 512 L S + WKIHMPAAL YNLCDDKYNWYYH LPQ H DNRVMYWPRGRVWGGSSSLNAMVYIRGHA DY+RW+REGAEGW+Y CLPYF+KAQ+H+LG + YRG SGPLHVSR N+ LH F+EAGQQAG+P T+D+NGYQQ G+GW DMTI++GKRWS ASAYLRPALGRPN+KTEV + T+++FDG RA+G+EY QNG++++ + + ++ILSGGAINSPQLL+LSGVG+AD LK + IPV QH+PGVG NLQDHLELYV Q+C +PITL AQ+ M+K+GLEW TG TAHLESGGF RSRP + HPDI FHFLP QV+DHGR EA+QVHVGPMR TS GW+KLKS +P DHP++QPNYLST+ID WE RQSV+LSREIF Q AFD R E+ PG QVQSD ++D F+R K+DSAYHPSCTCKMGSA D M VVD TRV+G+D LRVVDAS+MPS+ SGNLNAPTIM+AE+AADII GR L + VP+++ DT+R Sbjct: 109 LGSSRLSWKIHMPAALTYNLCDDKYNWYYHILPQAHMDNRVMYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWQREGAEGWDYDHCLPYFRKAQTHELGENRYRGGSGPLHVSRGKTNHPLHRAFIEAGQQAGYPFTDDMNGYQQEGLGWMDMTIYKGKRWSTASAYLRPALGRPNLKTEVRCLTTKILFDGSRAVGVEYTQNGQQKRAFAEKEVILSGGAINSPQLLLLSGVGNADDLKELGIPVTQHLPGVGSNLQDHLELYVQQQCTQPITLYKAQKPFHMLKIGLEWLTMFTGYGATAHLESGGFVRSRPHVPHPDIQFHFLPSQVIDHGRVASKIEAYQVHVGPMRSTSVGWMKLKSANPLDHPVLQPNYLSTDIDVWEFRQSVKLSREIFAQKAFDPFRGPEVQPGPQVQSDAEIDAFVRQKADSAYHPSCTCKMGSASDPMAVVDSNTRVLGLDGLRVVDASVMPSIVSGNLNAPTIMIAEKAADIIRGRPALGDSGVPIYQPPTLDTQR 624
BLAST of choline mitochondrial vs. nr
Match: gi|551497337|ref|XP_005800223.1| (choline dehydrogenase, mitochondrial [Xiphophorus maculatus]) HSP 1 Score: 764.222 bits (1972), Expect = 0.000e+0 Identity = 354/511 (69.28%), Postives = 419/511 (82.00%), Query Frame = 0 Query: 1 LDSKMMQWKIHMPAALMYNLCDDKYNWYYHTLPQEHCDNRVMYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGADTYRGESGPLHVSRRNWNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGKRAIGIEYEQNGEKQQVYG-QDIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHLELYVVQKCKKPITLLGAQQGASMIKVGLEWFYNQTGPARTAHLESGGFARSRPDLEHPDIMFHFLPGQVVDHGRQTPDTEAFQVHVGPMRPTSRGWIKLKSKSPQDHPLIQPNYLSTEIDRWEMRQSVRLSREIFEQAAFDSLRDGELVPGSQVQSDDQLDQFIRAKSDSAYHPSCTCKMGSAQDNMTVVDPTTRVVGVDNLRVVDASIMPSVASGNLNAPTIMLAERAADIILGRDLLTPNAVPVFETDT 510 L S + WKIHMPAAL YNLCDDKYNW+YHTLPQ DNRV+YWPRGRVWGGSSSLNAMVYIRGHA DY+RW+REGAEGW+Y CLPYF+KAQ H+LG + YRG SGPLHVSR N+ LH F+EAGQQAG+P T+D+NGYQQ G+GW DMT+++GKRWS+ASAYLRPALGRPN+KTEV+ M T+++FDGKRA+G+EY QNGEK++V+ +++ILSGGAINSPQLLMLSGVG+AD LK + IPV+QH+PGVG NLQDHLELYV Q+C +PITL AQ+ MIK+GLEW TG TAHLESGGF RSRP + HPDI FHFLP QV+DHGR EA+QVHVGPMR TS GW+KLKS +P DHP++QPNYLST+ID WE R+ V+LSREIF Q+AFD R E+ PG QVQSD +D F+R K+DSAYHPSCTCKMGSA D VVD + RV+G++ LRVVDASIMPS+ SGNLNAPTIM+AE+AAD+I GR L VPV++ T Sbjct: 90 LGSSRLSWKIHMPAALTYNLCDDKYNWFYHTLPQAQMDNRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWQREGAEGWDYEHCLPYFRKAQCHELGENRYRGGSGPLHVSRGKTNHPLHKAFIEAGQQAGYPFTDDMNGYQQEGVGWMDMTVYKGKRWSSASAYLRPALGRPNLKTEVHCMTTKILFDGKRAVGVEYVQNGEKKRVFADKEVILSGGAINSPQLLMLSGVGNADELKDLGIPVIQHLPGVGNNLQDHLELYVQQQCTQPITLYKAQKPFHMIKIGLEWLTLFTGYGATAHLESGGFIRSRPHVTHPDIQFHFLPSQVIDHGRVPSKIEAYQVHVGPMRSTSIGWMKLKSANPTDHPILQPNYLSTDIDVWEFRECVKLSREIFAQSAFDQFRGPEVQPGLQVQSDADIDAFVRQKADSAYHPSCTCKMGSASDPTAVVDSSARVLGLERLRVVDASIMPSIVSGNLNAPTIMMAEKAADMIRGRPPLVEPGVPVYQPTT 600
BLAST of choline mitochondrial vs. nr
Match: gi|617490107|ref|XP_007577991.1| (PREDICTED: choline dehydrogenase, mitochondrial [Poecilia formosa]) HSP 1 Score: 763.451 bits (1970), Expect = 0.000e+0 Identity = 353/511 (69.08%), Postives = 420/511 (82.19%), Query Frame = 0 Query: 1 LDSKMMQWKIHMPAALMYNLCDDKYNWYYHTLPQEHCDNRVMYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGADTYRGESGPLHVSRRNWNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGKRAIGIEYEQNGEKQQVYG-QDIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHLELYVVQKCKKPITLLGAQQGASMIKVGLEWFYNQTGPARTAHLESGGFARSRPDLEHPDIMFHFLPGQVVDHGRQTPDTEAFQVHVGPMRPTSRGWIKLKSKSPQDHPLIQPNYLSTEIDRWEMRQSVRLSREIFEQAAFDSLRDGELVPGSQVQSDDQLDQFIRAKSDSAYHPSCTCKMGSAQDNMTVVDPTTRVVGVDNLRVVDASIMPSVASGNLNAPTIMLAERAADIILGRDLLTPNAVPVFETDT 510 L S + WKIHMPAAL YNLCDDKYNW+YHTLPQ H DNRV+YWPRGRVWGGSSSLNAMVYIRGHA DY+RW+REGAEGW+Y CLPYF+KAQ H+LG + YRG SGPLHVSR N+ LH F++AGQQAG+P T+D+NGYQQ G+GW DMTI++GKRWS+ASAYLRPALGRPN+KTEV+ M T+++FDG RA+G+EY QNGEK++V+ +++ILSGGAINSPQLLMLSGVG+A+ LK++ IPV+QH+PGVG NLQDHLELYV Q+C +PITL AQ+ MIK+GLEW TG TAHLESGGF RSRP + HPDI FHFLP QV+DHGR + EA+QVHVGPMR TS GW+KLKS +P DHP++QPNYLST+ID WE R+ V+LSREIF Q+AFD R E+ PG QVQSD +D F+R K+DSAYHPSCTCKMGSA D VVD + RV+G++ LRVVDASIMPS+ SGNLNAPTIM+AE+AAD+I GR L VPV+ T Sbjct: 90 LGSSRLSWKIHMPAALTYNLCDDKYNWFYHTLPQAHMDNRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWQREGAEGWDYEHCLPYFRKAQCHELGENRYRGGSGPLHVSRGKTNHPLHKAFIDAGQQAGYPFTDDMNGYQQEGVGWMDMTIYQGKRWSSASAYLRPALGRPNLKTEVHCMTTKILFDGNRAVGVEYVQNGEKKRVFADKEVILSGGAINSPQLLMLSGVGNAEELKALGIPVIQHLPGVGNNLQDHLELYVQQQCTQPITLYKAQKPFHMIKIGLEWLTLFTGYGATAHLESGGFIRSRPHVTHPDIQFHFLPSQVIDHGRVSSKIEAYQVHVGPMRSTSIGWMKLKSPNPMDHPILQPNYLSTDIDVWEFRECVKLSREIFAQSAFDPFRGPEVQPGLQVQSDADIDAFVRRKADSAYHPSCTCKMGSASDPTAVVDSSARVLGLERLRVVDASIMPSIVSGNLNAPTIMMAEKAADVIRGRPPLVDPGVPVYRPPT 600
BLAST of choline mitochondrial vs. nr
Match: gi|962005206|ref|XP_014877399.1| (PREDICTED: choline dehydrogenase, mitochondrial [Poecilia latipinna] >gi|962005210|ref|XP_014877400.1| PREDICTED: choline dehydrogenase, mitochondrial [Poecilia latipinna]) HSP 1 Score: 763.066 bits (1969), Expect = 0.000e+0 Identity = 353/511 (69.08%), Postives = 420/511 (82.19%), Query Frame = 0 Query: 1 LDSKMMQWKIHMPAALMYNLCDDKYNWYYHTLPQEHCDNRVMYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGADTYRGESGPLHVSRRNWNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGKRAIGIEYEQNGEKQQVYG-QDIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHLELYVVQKCKKPITLLGAQQGASMIKVGLEWFYNQTGPARTAHLESGGFARSRPDLEHPDIMFHFLPGQVVDHGRQTPDTEAFQVHVGPMRPTSRGWIKLKSKSPQDHPLIQPNYLSTEIDRWEMRQSVRLSREIFEQAAFDSLRDGELVPGSQVQSDDQLDQFIRAKSDSAYHPSCTCKMGSAQDNMTVVDPTTRVVGVDNLRVVDASIMPSVASGNLNAPTIMLAERAADIILGRDLLTPNAVPVFETDT 510 L S + WKIHMPAAL YNLCDDKYNW+YHTLPQ H DNRV+YWPRGRVWGGSSSLNAMVYIRGHA DY+RW+REGAEGW+Y CLPYF+KAQ H+LG + YRG SGPLHVSR N+ LH F++AGQQAG+P T+D+NGYQQ G+GW DMTI++GKRWS+ASAYLRPALGRPN+KTEV+ M T+++FDG RA+G+EY QNGEK++V+ +++ILSGGAINSPQLLMLSGVG+A+ LK++ IPV+QH+PGVG NLQDHLELYV Q+C +PITL AQ+ MIK+GLEW TG TAHLESGGF RSRP + HPDI FHFLP QV+DHGR + EA+QVHVGPMR TS GW+KLKS +P DHP++QPNYLST+ID WE R+ V+LSREIF Q+AFD R E+ PG QVQSD +D F+R K+DSAYHPSCTCKMGSA D VVD + RV+G++ LRVVDASIMPS+ SGNLNAPTIM+AE+AAD+I GR L VPV+ T Sbjct: 90 LGSSRLSWKIHMPAALTYNLCDDKYNWFYHTLPQAHMDNRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWQREGAEGWDYEHCLPYFRKAQCHELGENRYRGGSGPLHVSRGKTNHPLHKAFIDAGQQAGYPFTDDMNGYQQEGVGWMDMTIYQGKRWSSASAYLRPALGRPNLKTEVHCMTTKILFDGNRAVGVEYVQNGEKKRVFADKEVILSGGAINSPQLLMLSGVGNAEELKALGIPVIQHLPGVGNNLQDHLELYVQQQCTQPITLYKAQKPFHMIKIGLEWLTLFTGYGATAHLESGGFIRSRPHVTHPDIQFHFLPSQVIDHGRVSSKIEAYQVHVGPMRSTSIGWMKLKSPNPMDHPILQPNYLSTDIDVWEFRECVKLSREIFAQSAFDPFRGPEVQPGLQVQSDADIDAFVRRKADSAYHPSCTCKMGSASDPTAVVDSSARVLGLERLRVVDASIMPSIVSGNLNAPTIMMAEKAADVIRGRPPLVDPGVPVYRPPT 600
BLAST of choline mitochondrial vs. nr
Match: gi|1308536574|ref|XP_023149334.1| (choline dehydrogenase, mitochondrial [Amphiprion ocellaris]) HSP 1 Score: 762.681 bits (1968), Expect = 0.000e+0 Identity = 356/511 (69.67%), Postives = 414/511 (81.02%), Query Frame = 0 Query: 1 LDSKMMQWKIHMPAALMYNLCDDKYNWYYHTLPQEHCDNRVMYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGADTYRGESGPLHVSRRNWNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGKRAIGIEYEQNGEKQQVYGQ-DIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHLELYVVQKCKKPITLLGAQQGASMIKVGLEWFYNQTGPARTAHLESGGFARSRPDLEHPDIMFHFLPGQVVDHGRQTPDTEAFQVHVGPMRPTSRGWIKLKSKSPQDHPLIQPNYLSTEIDRWEMRQSVRLSREIFEQAAFDSLRDGELVPGSQVQSDDQLDQFIRAKSDSAYHPSCTCKMGSAQDNMTVVDPTTRVVGVDNLRVVDASIMPSVASGNLNAPTIMLAERAADIILGRDLLTPNAVPVFETDT 510 L S + WKIHMPAAL YNLCDDKYNWYYH LPQ H DNRVMYWPRGRVWGGSSSLNAMVYIRGHA DY+RW+REGAEGW+Y CLPYF+KAQSH+LG + YRG SGPLHVSR N+ LH F+EAGQQAG+P T+D+NGYQQ G+GW DMTI +GKRWS ASAYLRPAL RPN+KTEV+ + T+++FDG RA+G+EY QNG+K++ + + ++ILSGGAINSPQLLMLSGVG+AD LK + IPV QH+PGVG NLQDHLELYV Q+C +PITL AQ+ M+K+GLEW TG TAHLESGGF RSRP + HPDI FHFLP QV+DHGR EA+QVHVGPMR TS GW+KLKS +P DHP++QPNYLST+ID WE R+SV+LSREIF Q AFD R E+ PG QVQSD +D F+R K+DSAYHPSCTCKMGS D M VVD TRV+G+D LRV DASIMPS+ SGNLNAPTIM+AE+AADII GR L AVPV++ T Sbjct: 109 LGSSRLSWKIHMPAALTYNLCDDKYNWYYHILPQAHMDNRVMYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWQREGAEGWDYDHCLPYFRKAQSHELGENRYRGGSGPLHVSRGKTNHPLHRAFIEAGQQAGYPFTDDMNGYQQEGLGWMDMTIFKGKRWSTASAYLRPALPRPNLKTEVHCLTTKILFDGSRAVGVEYTQNGQKKRAFAEKEVILSGGAINSPQLLMLSGVGNADDLKGLGIPVTQHLPGVGSNLQDHLELYVQQQCTQPITLYKAQKPFHMVKIGLEWLTMFTGYGATAHLESGGFIRSRPHVLHPDIQFHFLPSQVIDHGRVASKIEAYQVHVGPMRSTSIGWMKLKSANPLDHPILQPNYLSTDIDVWEFRESVKLSREIFAQKAFDPFRGPEVQPGPQVQSDADIDAFVRQKADSAYHPSCTCKMGSPSDPMAVVDSNTRVLGLDGLRVADASIMPSIVSGNLNAPTIMIAEKAADIIRGRPALADCAVPVYQPPT 619
BLAST of choline mitochondrial vs. nr
Match: gi|658860562|ref|XP_008413034.1| (PREDICTED: choline dehydrogenase, mitochondrial [Poecilia reticulata] >gi|1039402176|ref|XP_017161194.1| PREDICTED: choline dehydrogenase, mitochondrial [Poecilia reticulata]) HSP 1 Score: 761.525 bits (1965), Expect = 0.000e+0 Identity = 354/511 (69.28%), Postives = 416/511 (81.41%), Query Frame = 0 Query: 1 LDSKMMQWKIHMPAALMYNLCDDKYNWYYHTLPQEHCDNRVMYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGADTYRGESGPLHVSRRNWNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGKRAIGIEYEQNGEKQQVYG-QDIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHLELYVVQKCKKPITLLGAQQGASMIKVGLEWFYNQTGPARTAHLESGGFARSRPDLEHPDIMFHFLPGQVVDHGRQTPDTEAFQVHVGPMRPTSRGWIKLKSKSPQDHPLIQPNYLSTEIDRWEMRQSVRLSREIFEQAAFDSLRDGELVPGSQVQSDDQLDQFIRAKSDSAYHPSCTCKMGSAQDNMTVVDPTTRVVGVDNLRVVDASIMPSVASGNLNAPTIMLAERAADIILGRDLLTPNAVPVFETDT 510 L S + WKIHMPAAL YNLCDDKYNW+YHTLPQ H DNRV+YWPRGRVWGGSSSLNAMVYIRGHA DY+RW+REGAEGW+Y CLPYF+KAQ H+LG + YRG SGPL VSR N+ LH F+ AGQQAG+P T+D+NGYQQ G+GW DMTI++GKRWS+ASAYLRPALGRPN+KTEV M T+++FDGKRA+G+EY QNGEK++V+ +++ILSGGAINSPQLLMLSGVG+AD LK + IPV+QH+PGVG NLQDHLELYV Q+C +PITL AQ+ MIK+GLEW TG TAHLESGGF RSRP + HPDI FHFLP QV+DHGR + EA+QVHVGPMR TS GW+KLKS +P DHP++QPNYLST+ID WE R+ V+LSREIF Q+AFD R E+ PG QVQSD +D F+R K+DSAYHPSCTCKMGSA D VVD RV+G++ LRVVDASIMPS+ SGNLNAPTIM+AE+AAD+I GR L VPV+ T Sbjct: 90 LGSSRLSWKIHMPAALTYNLCDDKYNWFYHTLPQAHMDNRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWQREGAEGWDYEHCLPYFRKAQCHELGENRYRGGSGPLQVSRGKTNHPLHKAFIYAGQQAGYPFTDDMNGYQQEGVGWMDMTIYQGKRWSSASAYLRPALGRPNLKTEVRCMTTKILFDGKRAVGVEYVQNGEKKRVFADKEVILSGGAINSPQLLMLSGVGNADELKDLGIPVIQHLPGVGNNLQDHLELYVQQQCTQPITLYKAQKPFHMIKIGLEWLTLFTGYGATAHLESGGFIRSRPHVTHPDIQFHFLPSQVIDHGRVSSKIEAYQVHVGPMRSTSIGWMKLKSPNPMDHPILQPNYLSTDIDVWEFRECVKLSREIFAQSAFDPFRGPEVQPGLQVQSDADIDAFVRRKADSAYHPSCTCKMGSASDPTAVVDSRARVLGLERLRVVDASIMPSIVSGNLNAPTIMMAEKAADVIRGRPPLVEPGVPVYRPPT 600
BLAST of choline mitochondrial vs. nr
Match: gi|1007769026|ref|XP_015822878.1| (PREDICTED: choline dehydrogenase, mitochondrial [Nothobranchius furzeri]) HSP 1 Score: 761.14 bits (1964), Expect = 0.000e+0 Identity = 353/511 (69.08%), Postives = 418/511 (81.80%), Query Frame = 0 Query: 1 LDSKMMQWKIHMPAALMYNLCDDKYNWYYHTLPQEHCDNRVMYWPRGRVWGGSSSLNAMVYIRGHAYDYDRWEREGAEGWNYFGCLPYFKKAQSHQLGADTYRGESGPLHVSRRNWNNALHSVFLEAGQQAGHPLTEDVNGYQQAGMGWFDMTIHEGKRWSAASAYLRPALGRPNIKTEVNVMVTRVIFDGKRAIGIEYEQNGEKQQVYG-QDIILSGGAINSPQLLMLSGVGDADHLKSMDIPVVQHVPGVGQNLQDHLELYVVQKCKKPITLLGAQQGASMIKVGLEWFYNQTGPARTAHLESGGFARSRPDLEHPDIMFHFLPGQVVDHGRQTPDTEAFQVHVGPMRPTSRGWIKLKSKSPQDHPLIQPNYLSTEIDRWEMRQSVRLSREIFEQAAFDSLRDGELVPGSQVQSDDQLDQFIRAKSDSAYHPSCTCKMGSAQDNMTVVDPTTRVVGVDNLRVVDASIMPSVASGNLNAPTIMLAERAADIILGRDLLTPNAVPVFETDT 510 L S + WKIHMPAAL YNLCDDKYNW+YHTLPQ H DNRV+YWPRGRVWGGSSSLNAMVYIRGHA DY+RW+REGAEGW+Y CLPYF+KAQ H+LG + YRG SGPL VSR N+ LH F+EAGQQAG+P T+D+NG+QQ G+GW DMT+++GKRWS+ASAYLRPALGRPN+KTEVN + T+++FDG+RA+G+EY QNG+K++V+ +++ILSGGAINSPQLLMLSGVGDAD LK IPVVQH+PGVG+NLQDHLELY+ Q+C +PITL AQ+ M+K+GLEW TG TAHLESGGF RSR + HPDI FHFLP QV+DHGR EA+QVHVGPMR TS GW+KLKS +P DHP++QPNYLST+ID WE RQ V+LSREIF Q AFD R E++PG QVQSD ++D F+R K+DSAYHPSCTCKMGS D M VVDP TRV+G++ LRVVDASIMPSV SGNLNAPTIM+AE+AAD I GR VPV++ T Sbjct: 90 LGSLRLSWKIHMPAALTYNLCDDKYNWFYHTLPQAHMDNRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWQREGAEGWDYEHCLPYFRKAQCHELGENRYRGGSGPLQVSRGKTNHPLHRAFIEAGQQAGYPFTDDMNGHQQEGVGWMDMTVYKGKRWSSASAYLRPALGRPNLKTEVNCLTTKILFDGRRAVGVEYMQNGQKKKVFADKEVILSGGAINSPQLLMLSGVGDADDLKEHGIPVVQHLPGVGKNLQDHLELYIQQQCTQPITLYKAQKPFHMVKIGLEWLTMFTGYGATAHLESGGFIRSRAKVTHPDIQFHFLPSQVIDHGRVASKLEAYQVHVGPMRSTSIGWMKLKSNNPLDHPILQPNYLSTDIDVWEFRQCVKLSREIFAQKAFDPFRGPEVLPGPQVQSDAEIDAFVRQKADSAYHPSCTCKMGSPSDPMAVVDPNTRVLGLERLRVVDASIMPSVVSGNLNAPTIMMAEKAADNIRGRPAPVDAEVPVYKPAT 600 The following BLAST results are available for this feature:
BLAST of choline mitochondrial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 5
BLAST of choline mitochondrial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of choline mitochondrial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1226_size54525:33158..37075- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold1226_size54525-processed-gene-0.7 ID=snap_masked-scaffold1226_size54525-processed-gene-0.7|Name=choline mitochondrial|organism=Tigriopus kingsejongensis|type=gene|length=3918bp|location=Sequence derived from alignment at scaffold1226_size54525:33158..37075- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'choline mitochondrial' has the following synonyms
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