dead deah box helicase, snap_masked-scaffold1528_size37208-processed-gene-0.1 (gene) Tigriopus kingsejongensis

Overview


Name	dead deah box helicase
Unique Name	snap_masked-scaffold1528_size37208-processed-gene-0.1
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000005110 (supercontig:LSalAtl2s:LSalAtl2s26:913218:916036:-1 gene:EMLSAG00000005110 transcript:EMLSAT00000005110 description:"maker-LSalAtl2s26-augustus-gene-8.40")

HSP 1 Score: 228.024 bits (580), Expect = 4.246e-69
Identity = 129/298 (43.29%), Postives = 177/298 (59.40%), Query Frame = 0

Query:   12 PNAKTVRG------LVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAP----LLAKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDA----------HRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAF 289
            P++K  R       L+LAPTRELA QI D    +   S ++  +V GGA +  Q   L  G  LLVATPGRL+D+LDR  + L++  YLVLDEAD+MLDMGF   +R+I        A  RQT+MFSAT PK +  LA  +L + + + V   G   + I Q + +V +  K   L++LL+A              L LVF  T+ G ++L ++L  +GF   SIHG+++Q +R  A+  F++G   +LVAT VAARG+DIP V++V NFDLP+  E YVHRIGRT R G  G A +F
Sbjct:  252 PHSKNKRSKQYPMALILAPTRELATQIFDEAKKFAYRSLVQPCVVYGGANVFEQMMDLDRGCHLLVATPGRLVDMLDRGKISLEQCKYLVLDEADRMLDMGFEPQIRKIVENDNMPPAGQRQTLMFSATFPKEIQMLARDFLANYIFLAVGRVGSTSENITQKIVWVDELDKRSFLLDLLEAAGLAKGPAGNEDSSLTLVFVETRKGADQLDEYLYKEGFPVTSIHGDRTQREREDALRRFRSGNTPILVATAVAARGLDIPNVKHVINFDLPSDVEEYVHRIGRTGRMGNLGLATSF 549

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BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000002581 (supercontig:LSalAtl2s:LSalAtl2s151:1305107:1306803:-1 gene:EMLSAG00000002581 transcript:EMLSAT00000002581 description:"maker-LSalAtl2s151-snap-gene-13.39")

HSP 1 Score: 209.534 bits (532), Expect = 3.579e-63
Identity = 120/297 (40.40%), Postives = 178/297 (59.93%), Query Frame = 0

Query:   20 LVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMAELADSYL--TDPVRVQV-NPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRD---ELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVD---LKDIEKAMKE 307
            L++APTRELA+QI + +  +   S +  A +VGG     Q + L  G +++VATPGRLIDL++   V L    Y+VLDEAD+MLDMGF   +R+I   +  DRQ +M+SAT P  +  LA  +   TD   V + +    A K I Q   +  +  K D + E+L++  +   +  L+F  TK   ++L + L+   F    IHG+K+Q  RTRA+D F++G++ +LVATDVA+RG+D+  ++ V N+D PN  E+YVHRIGRT R   EG + +F   DE+ D    KD+   +KE
Sbjct:  156 LIIAPTRELAEQIHNVVDGF--ASKIPTACLVGGNHKQGQIRDLNRGAEIVVATPGRLIDLMEDGDVDLKRCSYMVLDEADRMLDMGFEPQIRKIMRQVRPDRQLLMWSATWPSEVQSLAHDFFGGTDYAHVNIGSSELXANKLIMQDFKFCERFEKMDSIKEILESLSEVESKKVLIFAATKIRVDQLVRKLKYWNFVVDGIHGDKTQAMRTRALDKFRSGRINILVATDVASRGLDVNDIKVVINYDFPNNIEDYVHRIGRTGRCSKEGKSFSFF--DEVEDGSKAKDLINVLKE 448

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BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000002458 (supercontig:LSalAtl2s:LSalAtl2s1472:18624:24320:1 gene:EMLSAG00000002458 transcript:EMLSAT00000002458 description:"maker-LSalAtl2s1472-snap-gene-0.14")

HSP 1 Score: 217.238 bits (552), Expect = 6.723e-63
Identity = 120/302 (39.74%), Postives = 179/302 (59.27%), Query Frame = 0

Query:   19 GLVLAPTRELAKQISDNLTNY----TKGS--HLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAP--DE--IVDLKDIEKAMKEVIP 310
            GL++ P+RELAKQI +++ +Y     K S   ++  L +GG         +  GV ++VATPGRL+DLL+++ + L+   YL LDEAD+M+DMGF   +R I       RQT++FSATMPK +   A S L  P+ V V   G A   I Q + YV   AK   ++E+L      + L+F   K   + ++++L  KG +A S+HG K Q  R++A+ DF+  +  VLVATDVA++G+D P +++V N+D+P+  ENYVHRIGRT R   +G A        DE  ++DLK +    K+ +P
Sbjct: 1052 GLIVVPSRELAKQIHESIYSYFSYLKKNSFPEIRSCLAIGGTSSSETMDVVKKGVHIVVATPGRLMDLLNKKMLNLEICRYLCLDEADRMIDMGFEEDVRTIFSYFKGQRQTLLFSATMPKKIQNFAQSALVKPITVNVGRAGAASMNIIQEVEYVKSEAKVVHIIEMLKKTPPPV-LIFAERKQDVDAIHEYLLLKGVSAVSVHGGKDQDDRSKAVTDFRNLRKDVLVATDVASKGLDFPCIQHVINYDMPDDIENYVHRIGRTGRGNFKGYATTMINKLVDENVLLDLKHLLIEAKQKVP 1352

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BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000004918 (supercontig:LSalAtl2s:LSalAtl2s259:1039310:1040989:-1 gene:EMLSAG00000004918 transcript:EMLSAT00000004918 description:"maker-LSalAtl2s259-augustus-gene-10.16")

HSP 1 Score: 204.912 bits (520), Expect = 2.772e-61
Identity = 116/273 (42.49%), Postives = 164/273 (60.07%), Query Frame = 0

Query:   20 LVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAV-KKINQSLHYVAQAAKSDLLVELLDAH--RDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAF 289
            L++APTRELA Q    L +  K    K   V GG    AQ + L  GV++LVATPGRL+DL +   V L    Y+VLDEAD+MLD GF   +RRI     K+RQT +FSAT P  + +LA  +L  P++V +     A  K + Q +  V + ++   +  LL+ +  +    L+F   K   ++L+  L+ + +   +IHG+KSQ  R +A+++FK+GK+ +L+ATDVAARG+DIP V YV N+  P   E+YVHRIGRT RAG  G A  F
Sbjct:  188 LIVAPTRELAMQSQVVLESAGKEIGFKSLCVYGGVNKYAQRQSLKSGVEILVATPGRLLDLAEEGCVDLSGVSYVVLDEADRMLDQGFEQDIRRILGQTHKERQTCLFSATWPDSIRKLAHEFLKSPIKVTIGSEDLAAGKTVTQIVEVVDERSRDGKIKGLLNKYHKKKNRILIFVLYKREADRLWNSLKHE-WNCTTIHGDKSQDARIQAVENFKSGKIPILIATDVAARGLDIPDVEYVLNYSFPLTIEDYVHRIGRTGRAGKSGIAHTF 459

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BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000010143 (supercontig:LSalAtl2s:LSalAtl2s66:712270:714003:-1 gene:EMLSAG00000010143 transcript:EMLSAT00000010143 description:"augustus_masked-LSalAtl2s66-processed-gene-7.1")

HSP 1 Score: 203.756 bits (517), Expect = 5.548e-61
Identity = 116/273 (42.49%), Postives = 165/273 (60.44%), Query Frame = 0

Query:   20 LVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPG-QAVKKINQSLHYV-AQAAKSDLLVELLDAHRDE-LALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAF 289
            LVL+PTRELA QI+D +  Y +   +K   V GG    AQ K +  GV +++ATPGRL DL++   + ++   YLVLDEAD+MLDMGF   +R+I   +  DRQT+M SAT P  +  LA +Y+ DP+ V +      AV  + Q +  V ++  K D L++  +    E  A++F   K   +     L   G    SIHG + Q  R +A+ DFK G VR+L+ATDVA+RGID+  + +V NFD PN  E YVHRIGR+ RAG +G++++F
Sbjct:   67 LVLSPTRELALQIADEVKKY-EYRGIKSVCVYGGGDRKAQVKVVTQGVQIVIATPGRLNDLIESGCIAVESITYLVLDEADRMLDMGFEPQIRKILLDVRPDRQTVMTSATWPPGVRRLASNYMKDPITVSIGSLDLAAVHSVTQKIFVVESEEEKDDRLLDFFNNMTPEDKAIIFMSKKAKVDDYSSSLCLAGVDCQSIHGGRDQMDREQALLDFKLGHVRILIATDVASRGIDVEDISHVINFDFPNSMEEYVHRIGRSGRAGKKGSSISF 338

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BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000011189 (supercontig:LSalAtl2s:LSalAtl2s760:470421:474651:1 gene:EMLSAG00000011189 transcript:EMLSAT00000011189 description:"maker-LSalAtl2s760-augustus-gene-3.33")

HSP 1 Score: 205.297 bits (521), Expect = 1.366e-59
Identity = 112/292 (38.36%), Postives = 163/292 (55.82%), Query Frame = 0

Query:   20 LVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPG-QAVKKINQSLHYVAQAAKSDLLVELLD---AHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIEKAMKE 307
            LVLAPTRELA+QI +  + + + S +K   + GGA    Q + L  G ++++ATPGRLID+L+   + +    YLVLDEAD+MLDMGF   +R+I   +  DRQ +M+SAT PK +  LA+ +L D V + +      A   I Q +       K + L  LL+          L+F  TK   ++L + +   G+ A  IHG+K Q +R   + +FK G   +L ATDVAARG+D+  V++V N+D PN +E+Y+HRIGRT R    G A            KD+   + E
Sbjct:  192 LVLAPTRELAQQIQEVASEFGRTSRIKSTCIFGGAPKGPQLRDLERGCEIVIATPGRLIDILEMGKINMRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRRLAEDFLDDYVHINIGAATLHANHNILQIVDVCEDFQKEEKLARLLEEIGCEPHNKILIFVETKRKADELTRLMRRDGYPAMCIHGDKQQKERDWVLGEFKHGATTILXATDVAARGLDVDDVKFVINYDYPNNSEDYIHRIGRTGRKDRTGTAYTLFTSGNSAKAKDLVDVLLE 483

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BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000008048 (supercontig:LSalAtl2s:LSalAtl2s479:213954:217803:1 gene:EMLSAG00000008048 transcript:EMLSAT00000008048 description:"maker-LSalAtl2s479-augustus-gene-2.18")

HSP 1 Score: 202.216 bits (513), Expect = 1.216e-58
Identity = 121/323 (37.46%), Postives = 178/323 (55.11%), Query Frame = 0

Query:   19 GLVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRI-------------------APLLA------KDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIEKAMKEVIPVASGTP 316
             +++APTRELA+QI +    +     +    V+GG     Q  +L  G ++++ATPGRLID+L+ R + L    Y+VLDEAD+M+DMGF   +++I                   A LL       K RQT+MF+ATMP  +  LA +YL  P  V +   G+ V+++ Q ++ + +  K + L+ +L+   +   ++F   K G +KL + LE  G+ AA++HG K Q QR  A+   KAG   +LVATDVA RGIDI  V  V N+D+    E Y HRIGRT RAG  G A++FC  ++     D+ K M    PV+   P
Sbjct:  404 AIIMAPTRELAQQIEEECNTFGGPLGIXTVAVIGGLSREDQGFKLRLGCEIVIATPGRLIDVLENRYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDNDEAENEAALLENIRSKNKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSIGRPVERVEQVVYMMKENDKRNKLISILNNGIEPPIIIFVNQKKGADKLAQGLEKMGYNAATLHGGKGQEQREYALSGLKAGNKDILVATDVAGRGIDIKNVSLVINYDMAKSIEPYTHRIGRTGRAGKSGKAISFCTQEDSPLFYDL-KQMLMSSPVSHCPP 725

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BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000000846 (supercontig:LSalAtl2s:LSalAtl2s1142:195200:196664:-1 gene:EMLSAG00000000846 transcript:EMLSAT00000000846 description:"augustus_masked-LSalAtl2s1142-processed-gene-1.9")

HSP 1 Score: 192.586 bits (488), Expect = 3.549e-57
Identity = 114/303 (37.62%), Postives = 175/303 (57.76%), Query Frame = 0

Query:   19 GLVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDR-RAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKD--RQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIEKAMKEVIPVASGTPWE 318
             LVL PTRELA QIS+      K   +K  ++VGG  +V+Q   L     +++ATPGRLID ++  +   L    YL++DEAD++L+M F   + +I   L +   R+ M+FSATM K +A+L  + L DPVRV+V+   Q V K+ Q   ++    K   LV +++       ++F  T  G  KL   L + GF A  ++G  SQ +R  +++ FK     +L+ATDVA+RG+DIP V  V N+D+P  +++Y+HR+GRTARAG  G A+ F    ++   + IE  + + +P+ SG   E
Sbjct:   95 ALVLTPTRELAYQISEQFEKLGKSIGVKCVVLVGGMDMVSQALVLGKKPHIIIATPGRLIDHMENTKGFDLRSLKYLIMDEADRILNMDFEIEVDKILSALPRGEGRKNMLFSATMTKKVAKLQRASLRDPVRVEVSSKYQTVDKLLQYYLFIPLKYKEMYLVHIINELAGNSFIIFSSTCSGTLKLALLLRNLGFTAIPLNGQMSQNKRLASLNKFKNKSRSILIATDVASRGLDIPHVDVVINYDIPTHSKDYIHRVGRTARAGRSGRAITFVCQYDVELYQRIETLIGKKLPLYSGATEE 397

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BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000009885 (supercontig:LSalAtl2s:LSalAtl2s643:195185:200626:1 gene:EMLSAG00000009885 transcript:EMLSAT00000009885 description:"maker-LSalAtl2s643-augustus-gene-2.22")

HSP 1 Score: 191.045 bits (484), Expect = 1.101e-56
Identity = 109/269 (40.52%), Postives = 155/269 (57.62%), Query Frame = 0

Query:   36 LTNYTKGSHLK---VALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAP----LLAKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVD 297
            L+ Y K + ++   + L++    I+A ++   G VD+L+ATPGRL+DL+ + AV LD   + VLDEAD+MLDMGF+  ++RI           RQT+MFSAT P  +   A  +L D V V V   G     + Q  + V +  K   L ++LD       LVF  TK   + L  +L        SIHG++ Q QR +A+ DF++GK  VLV+T VAARG+DI GV +V N+DLP   + YVHR+GRT R G +G A +F   +E +D
Sbjct:  134 LSGYKKPTPIQKTGIPLILAKRDIMACSQ--TGRVDILIATPGRLLDLVSKGAVSLDAVQFFVLDEADRMLDMGFLPEVKRIVSEGNMCCKTSRQTLMFSATFPYEVQSCAAEFLNDYVFVTVGIVGGVNTDVKQDFYQVEKFKKRQKLKDILDDVGTLKTLVFVETKKNTDFLASWLSENNVPTTSIHGDRLQSQREQALADFRSGKYPVLVSTAVAARGLDIKGVEHVVNYDLPKTVDEYVHRVGRTGRVGNKGKATSFYDGNEPMD 400

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BLAST of dead deah box helicase vs. L. salmonis genes
Match: EMLSAG00000011390 (supercontig:LSalAtl2s:LSalAtl2s787:174367:180499:1 gene:EMLSAG00000011390 transcript:EMLSAT00000011390 description:"augustus_masked-LSalAtl2s787-processed-gene-0.30")

HSP 1 Score: 197.978 bits (502), Expect = 1.343e-56
Identity = 120/309 (38.83%), Postives = 165/309 (53.40%), Query Frame = 0

Query:   19 GLVLAPTRELAKQISDNLTNYTKGSH-LKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLL---DRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDE-LALVFGRTKHGCEKLYKFLESKGF-AAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIEKAMK---EVIPVASGTPWE 318
             +++ PTREL  QI   +  ++K     +   V GG GI  Q   L  G +++V TPGR+ID+L     R        Y+VLDEAD+M DMGF   + RI      D+Q +MFSAT P+ M  LA   L  PV V V       K I+QS++ + +  K   L+ELL     E L ++F   +   + L K L S  + + AS+HG   Q  R   I +FK GKV++LVAT VAARG+D+  +  V N+D PN  E+YVHR GRT RAG  G A  F  P++     ++ KAM+    V+P      WE
Sbjct:  298 AIIMTPTRELCMQIGKEIKKFSKAIKGARSVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNCRRITYVVLDEADRMFDMGFEPQVSRIIDNCRPDKQMVMFSATFPRQMEALARRILCKPVEVTVGGRSVVCKDIDQSVYVLEEEHKFLKLLELLGQRSSEGLIIIFVDKQEHADSLLKDLMSASYTSCASLHGGVDQYDRDSIITNFKNGKVKILVATSVAARGLDVKELVLVVNYDCPNHYEDYVHRCGRTGRAGNSGFAATFLTPEQGRYAGEVIKAMELSDAVVPAPLKDLWE 606

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BLAST of dead deah box helicase vs. SwissProt
Match: gi|548730|sp|P25888.3|RHLE_ECOLI (RecName: Full=ATP-dependent RNA helicase RhlE)

HSP 1 Score: 290.426 bits (742), Expect = 1.494e-93
Identity = 153/320 (47.81%), Postives = 210/320 (65.62%), Query Frame = 0

Query:   11 KPNAK---TVRGLVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIEKAMKEVIPVASGTPWEVQPGQKKRP 327
            +P+AK    VR L+L PTRELA QI +N+ +Y+K  +++  +V GG  I  Q  +L GGVD+LVATPGRL+DL  + AV+LD+   LVLDEAD+MLDMGFIH +RR+   L   RQ ++FSAT    +  LA+  L +P+ ++V     A  ++ Q +H+V +  K +LL  ++     +  LVF RTKHG   L + L   G  +A+IHGNKSQG RTRA+ DFK+G +RVLVATD+AARG+DI  + +V N++LPNV E+YVHRIGRT RA A G A++    DE   L+DIEK +K+ IP  +   +E  P  K  P
Sbjct:   67 QPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEP 386

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BLAST of dead deah box helicase vs. SwissProt
Match: gi|123643052|sp|Q49Z29.1|CSHA_STAS1 (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA)

HSP 1 Score: 253.062 bits (645), Expect = 1.810e-78
Identity = 129/291 (44.33%), Postives = 187/291 (64.26%), Query Frame = 0

Query:   17 VRGLVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLL-AKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIEKAMK 306
            V+ L+LAPTRELA Q++++L  + KG +++V  V GG  I  Q K L  G  ++V TPGR+ID L+RR ++ ++   L+LDEAD+M++MGFI  ++ I   + A+ RQTM+FSATMPK +  L   ++  PV V+      +  +I +    V +  K D     LD H+ ELA+VFGRTK   ++L   L SKG+ A  +HG+ +Q +R   +  FK  ++ +LVATDVAARG+DI GV +VYNFD+P   E+Y HRIGRT RAG +G A+ F  P E+  ++ IE+A K
Sbjct:   70 VQSLILAPTRELAMQVAESLKAFAKGQNIQVVTVFGGMPIDRQIKALKKGPQIVVGTPGRVIDHLNRRTLKTNDIHTLILDEADEMMNMGFIDDMKFIMDKIPAEQRQTMLFSATMPKAIQTLVQQFMKSPVIVKTMNNEMSDPQIEEYYTIVKELEKFDTFTSFLDVHQPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQLDILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKKGVAITFVNPIEMDYIRQIEQANK 360

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BLAST of dead deah box helicase vs. SwissProt
Match: gi|81673916|sp|Q5HME0.1|CSHA_STAEQ (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA)

HSP 1 Score: 251.136 bits (640), Expect = 1.023e-77
Identity = 129/287 (44.95%), Postives = 182/287 (63.41%), Query Frame = 0

Query:   17 VRGLVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLL-AKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIE 302
            V+ L+LAPTRELA Q+++ L  ++KG  ++V  V GG  I  Q K L  G  ++V TPGR+ID L+RR ++      L+LDEAD+M++MGFI  +R I   + A+ RQTM+FSATMPK + EL   ++  P  ++      +  +I++    V +  K D     LD H+ ELA+VFGRTK   ++L   L SKG+ A  +HG+ +Q +R   +  FK  ++ +LVATDVAARG+DI GV +VYNFD+P   E+Y HRIGRT RAG EG AV F  P E+  ++ IE
Sbjct:   70 VQSLILAPTRELAMQVAEQLREFSKGQKVQVVTVFGGMPIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTLILDEADEMMNMGFIDDMRFIMDKIPAEQRQTMLFSATMPKAIQELVQQFMKAPKIIKTMNNEMSDPQIDEYYTIVKELEKFDTFTNFLDVHQPELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIE 356

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BLAST of dead deah box helicase vs. SwissProt
Match: gi|81768862|sp|Q8Y8N0.1|CSHA_LISMO (RecName: Full=ATP-dependent RNA helicase CshA)

HSP 1 Score: 251.521 bits (641), Expect = 1.173e-77
Identity = 128/313 (40.89%), Postives = 190/313 (60.70%), Query Frame = 0

Query:    6 MKAGVKPNAKTVRGLVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIEKAMKEVIPVASGTPWE 318
            M   +   +  V+ L++APTRELA Q+S+ L   +   H++V  V GG+ I  Q + L     ++V TPGR++D ++RR ++LD    LVLDEAD+ML+MGFI  +  I   +  +RQT++FSATMP  +  + + ++  P  +++         I Q    V +  K D+L  LLD    ELA+VFGRTK   ++L + L+ +G+ A  IHG+ +Q +R   +  FK GK+ VLVATDVAARG+DI GV +VYN+D+P   E+YVHRIGRT RAG EG A+ F  P E+  L+ +E+  K+ +       W+
Sbjct:   60 MIHKIDQKSNNVQALIIAPTRELAIQVSEELYKLSYDKHVRVLAVYGGSDISRQIRSLKKNPQIVVGTPGRILDHINRRTLKLDHVETLVLDEADEMLNMGFIDDIETILKEVPAERQTLLFSATMPDPIRRIGERFMHSPELIRIKAKEMTALLIEQFFVKVHEKEKFDVLSRLLDVQAPELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKFKEGKIDVLVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKEGMAITFVQPREMGYLRIVEETTKKRMQPLQAPTWD 372

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BLAST of dead deah box helicase vs. SwissProt
Match: gi|81843521|sp|Q8CRP6.1|CSHA_STAES (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA)

HSP 1 Score: 251.136 bits (640), Expect = 1.253e-77
Identity = 129/287 (44.95%), Postives = 182/287 (63.41%), Query Frame = 0

Query:   17 VRGLVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLL-AKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIE 302
            V+ L+LAPTRELA Q+++ L  ++KG  ++V  V GG  I  Q K L  G  ++V TPGR+ID L+RR ++      L+LDEAD+M++MGFI  +R I   + A+ RQTM+FSATMPK + EL   ++  P  ++      +  +I++    V +  K D     LD H+ ELA+VFGRTK   ++L   L SKG+ A  +HG+ +Q +R   +  FK  ++ +LVATDVAARG+DI GV +VYNFD+P   E+Y HRIGRT RAG EG AV F  P E+  ++ IE
Sbjct:   70 VQSLILAPTRELAMQVAEQLREFSKGQKVQVVTVFGGMPIERQIKVLKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTLILDEADEMMNMGFIDDMRFIMDKIPAEQRQTMLFSATMPKAIQELVQQFMKAPKIIKTMNNEMSDPQIDEYYTIVKELEKFDTFTNFLDVHQPELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIE 356

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BLAST of dead deah box helicase vs. SwissProt
Match: gi|134039178|sp|P96614.2|CSHA_BACSU (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA)

HSP 1 Score: 250.366 bits (638), Expect = 1.523e-77
Identity = 130/297 (43.77%), Postives = 184/297 (61.95%), Query Frame = 0

Query:   10 VKPNAKTVRGLVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIEKAMK 306
            + P +  ++ +V+APTRELA Q+S+ L    +    KV  + GG  I  Q + L    +++V TPGRL+D ++RR +RL+    +V+DEAD+ML+MGFI  +  I   +  + QT++FSATMP  +  +A+ ++T+P  V+V      V  I Q    V +  K D L  LLD    ELA+VFGRTK   ++L + L  +G+AA  IHG+ +Q +R  A+  FK G + VLVATDVAARG+DI GV +VYNFD+P   E+YVHRIGRT RAG  G A+ F  P E   L+ IE+  K
Sbjct:   65 INPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERKKFDTLTRLLDIQSPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKSMLRAIEQTTK 361

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BLAST of dead deah box helicase vs. SwissProt
Match: gi|123660708|sp|Q4L7W0.1|CSHA_STAHJ (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA)

HSP 1 Score: 250.366 bits (638), Expect = 2.044e-77
Identity = 128/289 (44.29%), Postives = 184/289 (63.67%), Query Frame = 0

Query:   17 VRGLVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLL-AKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIEKA 304
            V+ L+LAPTRELA Q+++ L  +++G +++V  V GG  I  Q K L  G  ++V TPGR+ID L+RR ++ +    L+LDEAD+M++MGFI  +R I   + A+ RQTM+FSATMPK +  L   ++  P  V+      +  +I++    V +  K D     LD H+ ELA+VFGRTK   ++L   L SKG+ A  +HG+ +Q +R   +  FK  ++ +LVATDVAARG+DI GV +VYNFD+P   E+Y HRIGRT RAG EG AV F  P E+  ++ IE +
Sbjct:   70 VQALILAPTRELAMQVAEQLREFSRGQNVQVVTVFGGMPIDRQIKALKRGPQIVVGTPGRVIDHLNRRTLKTNGIHTLILDEADEMMNMGFIDDMRFIMDKIPAEQRQTMLFSATMPKAIQTLVQQFMKSPQIVKTMNNEMSDPQIDEYYTIVKELEKFDTFTNFLDVHQPELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEDS 358

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BLAST of dead deah box helicase vs. SwissProt
Match: gi|81648913|sp|Q6G7M9.1|CSHA_STAAS (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA >gi|81694077|sp|Q5HEB9.1|CSHA_STAAC RecName: Full=DEAD-box ATP-dependent RNA helicase CshA >gi|81704263|sp|Q7A0D2.1|CSHA_STAAW RecName: Full=DEAD-box ATP-dependent RNA helicase CshA >gi|81705333|sp|Q7A4G0.1|CSHA_STAAN RecName: Full=DEAD-box ATP-dependent RNA helicase CshA >gi|81781186|sp|Q99SH6.1|CSHA_STAAM RecName: Full=DEAD-box ATP-dependent RNA helicase CshA >gi|122538977|sp|Q2FWH5.1|CSHA_STAA8 RecName: Full=DEAD-box ATP-dependent RNA helicase CshA >gi|123484971|sp|Q2FF45.1|CSHA_STAA3 RecName: Full=DEAD-box ATP-dependent RNA helicase CshA)

HSP 1 Score: 249.98 bits (637), Expect = 3.380e-77
Identity = 129/289 (44.64%), Postives = 181/289 (62.63%), Query Frame = 0

Query:   17 VRGLVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLL-AKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIEKA 304
            V+ L+LAPTRELA Q+++ L  +++G  ++V  V GG  I  Q K L  G  ++V TPGR+ID L+RR ++ D    L+LDEAD+M++MGFI  +R I   + A  RQTM+FSATMPK +  L   ++  P  ++      +  +I +    V +  K D     LD H+ ELA+VFGRTK   ++L   L SKG+ A  +HG+ +Q +R   +  FK  ++ +LVATDVAARG+DI GV +VYNFD+P   E+Y HRIGRT RAG EG AV F  P E+  ++ IE A
Sbjct:   70 VQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTMLFSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELEKFDTFTNFLDVHQPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEDA 358

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BLAST of dead deah box helicase vs. SwissProt
Match: gi|81650664|sp|Q6GEZ3.1|CSHA_STAAR (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA)

HSP 1 Score: 249.595 bits (636), Expect = 3.761e-77
Identity = 129/289 (44.64%), Postives = 181/289 (62.63%), Query Frame = 0

Query:   17 VRGLVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLL-AKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIEKA 304
            V+ L+LAPTRELA Q+++ L  +++G  ++V  V GG  I  Q K L  G  ++V TPGR+ID L+RR ++ D    L+LDEAD+M++MGFI  +R I   + A  RQTM+FSATMPK +  L   ++  P  ++      +  +I +    V +  K D     LD H+ ELA+VFGRTK   ++L   L SKG+ A  +HG+ +Q +R   +  FK  ++ +LVATDVAARG+DI GV +VYNFD+P   E+Y HRIGRT RAG EG AV F  P E+  ++ IE A
Sbjct:   70 VQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTMLFSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELEKFDTFTNFLDVHQPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEDA 358

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BLAST of dead deah box helicase vs. SwissProt
Match: gi|123548216|sp|Q2YUH3.1|CSHA_STAAB (RecName: Full=DEAD-box ATP-dependent RNA helicase CshA)

HSP 1 Score: 249.595 bits (636), Expect = 3.883e-77
Identity = 129/289 (44.64%), Postives = 181/289 (62.63%), Query Frame = 0

Query:   17 VRGLVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLL-AKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIEKA 304
            V+ L+LAPTRELA Q+++ L  +++G  ++V  V GG  I  Q K L  G  ++V TPGR+ID L+RR ++ D    L+LDEAD+M++MGFI  +R I   + A  RQTM+FSATMPK +  L   ++  P  ++      +  +I +    V +  K D     LD H+ ELA+VFGRTK   ++L   L SKG+ A  +HG+ +Q +R   +  FK  ++ +LVATDVAARG+DI GV +VYNFD+P   E+Y HRIGRT RAG EG AV F  P E+  ++ IE A
Sbjct:   70 VQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTMLFSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELEKFDTFTNFLDVHQPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEDA 358

[Close]

BLAST of dead deah box helicase vs. nr
Match: gi|1199470545|ref|WP_087209324.1| (ATP-dependent helicase [Loktanella vestfoldensis] >gi|1198349274|gb|ARU02016.1| ATP-dependent RNA helicase RhlE [Loktanella vestfoldensis])

HSP 1 Score: 610.527 bits (1573), Expect = 0.000e+0
Identity = 322/367 (87.74%), Postives = 340/367 (92.64%), Query Frame = 0

Query:    1 MIDALMKAGVKPNAKTVRGLVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIEKAMKEVIPVASGTPWEVQPGQKKRPNGGGGGGGRRGAGGGGGGAGGRNRAA--GGGKPGGGGGKP 365
            MI ALMKAGVKPN K VRGLVLAPTRELAKQI+DNLT YTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLM+ELAD++LTD VRVQVNPPGQAVKKI QS+H+VAQAAK+DLLVELLD HRDELALVFGRTKHGCEKLYK LE+KGFAAASIHGNKSQGQR RAI+ FKAGKVRVLVATDVAARGIDIPGVR+VYN+DLPNVAENYVHRIGRTARAGAEG+A+A  APDE+++L+DIEKAMKE IPVASG PWE+ PGQKKRPNGGGGGG R G GGGGGG GG   AA   GGKPGG  GKP
Sbjct:   59 MIHALMKAGVKPNPKAVRGLVLAPTRELAKQIADNLTAYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMSELADAFLTDAVRVQVNPPGQAVKKIAQSVHFVAQAAKTDLLVELLDKHRDELALVFGRTKHGCEKLYKTLEAKGFAAASIHGNKSQGQRERAIEAFKAGKVRVLVATDVAARGIDIPGVRHVYNYDLPNVAENYVHRIGRTARAGAEGSAIALVAPDEMIELQDIEKAMKEAIPVASGRPWEIMPGQKKRPNGGGGGGRRGGGGGGGGGGGGNRSAAPRAGGKPGGFSGKP 425

[Close]

BLAST of dead deah box helicase vs. nr
Match: gi|648660564|ref|WP_026352311.1| (ATP-dependent helicase [Loktanella vestfoldensis])

HSP 1 Score: 605.905 bits (1561), Expect = 0.000e+0
Identity = 310/368 (84.24%), Postives = 331/368 (89.95%), Query Frame = 0

Query:    1 MIDALMKAGVKPNAKTVRGLVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIEKAMKEVIPVASGTPWEVQPGQKKRPNGGGGGGGRRGAGGGGGGAGGRNRAAG---GGKPGGGGGKP 365
            MI ALMKAGVKPN K VRGLVLAPTRELAKQI+DNLT YTKGSHLKVALVVGGAGI AQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDET+YLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLM+ELAD++LTD VRVQVNPPGQAVKKI QS+H+VAQAAK+DLLVELLD HRDELALVFGRTKHGCEKLYK LE+KGFAAASIHGNKSQGQR RAI+ FKAGKVRVLVATDVAARGIDIPGVR+VYN+DLPNVAENYVHRIGRTARAGA+G+A+A  APDE+++L+DIEKAMKE IPVASG PWE+ PGQKKRPN      G    GG  GG GG NR+A    GGKP G  GKP
Sbjct:   59 MIHALMKAGVKPNPKAVRGLVLAPTRELAKQIADNLTAYTKGSHLKVALVVGGAGITAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETVYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMSELADAFLTDAVRVQVNPPGQAVKKIAQSVHFVAQAAKTDLLVELLDKHRDELALVFGRTKHGCEKLYKTLEAKGFAAASIHGNKSQGQRERAIEAFKAGKVRVLVATDVAARGIDIPGVRHVYNYDLPNVAENYVHRIGRTARAGADGSAIALVAPDEMIELQDIEKAMKETIPVASGRPWEIMPGQKKRPN------GGGAGGGRRGGGGGGNRSAAPRPGGKPAGAAGKP 420

[Close]

BLAST of dead deah box helicase vs. nr
Match: gi|84510401|gb|EAQ06857.1| (DEAD/DEAH box helicase [Loktanella vestfoldensis SKA53])

HSP 1 Score: 605.134 bits (1559), Expect = 0.000e+0
Identity = 318/367 (86.65%), Postives = 339/367 (92.37%), Query Frame = 0

Query:    1 MIDALMKAGVKPNAKTVRGLVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIEKAMKEVIPVASGTPWEVQPGQKKRPNGGGGGGGRRGAGGGGGGAGGRNRAA--GGGKPGGGGGKP 365
            MI ALMKAGVKPN K VRGLVLAPTRELAKQI+DNLT YTKGSHLKVALVVGGAGI AQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDET+YLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLM+ELAD++LTD VRVQVNPPGQAVKKI QS+H+VAQAAK+DLLV+LLD HRDELALVFGRTKHGCEKLYK LE+KGFAAASIHGNKSQGQR RAI+ FKAGKVRVLVATDVAARGIDIPGVR+VYN+DLPNVAENYVHRIGRTARAGA+G+A+A  APDE+++L+DIEKAMKE IPVASG PWE+ PGQKKRPNGGG GGGRRG GGG GG GG   AA   GGKPGG  GKP
Sbjct:   60 MIHALMKAGVKPNPKAVRGLVLAPTRELAKQIADNLTAYTKGSHLKVALVVGGAGITAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETVYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMSELADAFLTDAVRVQVNPPGQAVKKIAQSVHFVAQAAKTDLLVDLLDKHRDELALVFGRTKHGCEKLYKTLEAKGFAAASIHGNKSQGQRERAIEAFKAGKVRVLVATDVAARGIDIPGVRHVYNYDLPNVAENYVHRIGRTARAGADGSAIALVAPDEMIELQDIEKAMKETIPVASGRPWEIMPGQKKRPNGGGAGGGRRGGGGGAGGGGGNRSAAPRAGGKPGGFAGKP 426

[Close]

BLAST of dead deah box helicase vs. nr
Match: gi|750179260|ref|WP_040483334.1| (ATP-dependent helicase [Loktanella vestfoldensis])

HSP 1 Score: 604.364 bits (1557), Expect = 0.000e+0
Identity = 318/367 (86.65%), Postives = 339/367 (92.37%), Query Frame = 0

Query:    1 MIDALMKAGVKPNAKTVRGLVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIEKAMKEVIPVASGTPWEVQPGQKKRPNGGGGGGGRRGAGGGGGGAGGRNRAA--GGGKPGGGGGKP 365
            MI ALMKAGVKPN K VRGLVLAPTRELAKQI+DNLT YTKGSHLKVALVVGGAGI AQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDET+YLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLM+ELAD++LTD VRVQVNPPGQAVKKI QS+H+VAQAAK+DLLV+LLD HRDELALVFGRTKHGCEKLYK LE+KGFAAASIHGNKSQGQR RAI+ FKAGKVRVLVATDVAARGIDIPGVR+VYN+DLPNVAENYVHRIGRTARAGA+G+A+A  APDE+++L+DIEKAMKE IPVASG PWE+ PGQKKRPNGGG GGGRRG GGG GG GG   AA   GGKPGG  GKP
Sbjct:   59 MIHALMKAGVKPNPKAVRGLVLAPTRELAKQIADNLTAYTKGSHLKVALVVGGAGITAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETVYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMSELADAFLTDAVRVQVNPPGQAVKKIAQSVHFVAQAAKTDLLVDLLDKHRDELALVFGRTKHGCEKLYKTLEAKGFAAASIHGNKSQGQRERAIEAFKAGKVRVLVATDVAARGIDIPGVRHVYNYDLPNVAENYVHRIGRTARAGADGSAIALVAPDEMIELQDIEKAMKETIPVASGRPWEIMPGQKKRPNGGGAGGGRRGGGGGAGGGGGNRSAAPRAGGKPGGFAGKP 425

[Close]

BLAST of dead deah box helicase vs. nr
Match: gi|944380592|ref|WP_055686450.1| (ATP-dependent helicase [Loktanella sp. 5RATIMAR09] >gi|943690049|gb|KQI72306.1| DEAD/DEAH box helicase [Loktanella sp. 5RATIMAR09])

HSP 1 Score: 601.282 bits (1549), Expect = 0.000e+0
Identity = 311/365 (85.21%), Postives = 332/365 (90.96%), Query Frame = 0

Query:    1 MIDALMKAGVKPNAKTVRGLVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIEKAMKEVIPVASGTPWEVQPGQKKRPNGGGGGGGRRGAGGGGGGAGGRNRAAGGGKPGGGGGKP 365
            MI AL+KAGVKPN KT RGL+LAPTRELAKQISDNLT YTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLM ELA +YLTD VRVQVNPPGQAVKKINQS+H+VAQAAK+DLL+ELLD HRDELA+VFGRTKHGCEKLYK LE+KGFAAASIHGNKSQGQR RA+D FKAGK RVLVATDVAARG+DIP VR+VYN+DLPNVAENYVHRIGRTARAGA+G+AVA  APDE+++L+DIEKAMK+ IPVASG PWE+QPGQKKRPN   GGGG    G GGG  GG  RAA  GKP GG GKP
Sbjct:   59 MIHALLKAGVKPNPKTTRGLILAPTRELAKQISDNLTAYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMGELAGTYLTDAVRVQVNPPGQAVKKINQSVHFVAQAAKTDLLIELLDKHRDELAIVFGRTKHGCEKLYKVLENKGFAAASIHGNKSQGQRQRALDAFKAGKTRVLVATDVAARGLDIPDVRFVYNYDLPNVAENYVHRIGRTARAGADGSAVALVAPDEMIELQDIEKAMKDTIPVASGRPWEIQPGQKKRPN---GGGGGGRRGAGGGSRGGAPRAA--GKPAGGQGKP 418

[Close]

BLAST of dead deah box helicase vs. nr
Match: gi|1140799947|ref|WP_076659372.1| (ATP-dependent helicase [Loktanella rosea] >gi|1133997594|emb|SIT85004.1| ATP-dependent RNA helicase RhlE [Loktanella rosea])

HSP 1 Score: 599.742 bits (1545), Expect = 0.000e+0
Identity = 290/328 (88.41%), Postives = 311/328 (94.82%), Query Frame = 0

Query:    1 MIDALMKAGVKPNAKTVRGLVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIEKAMKEVIPVASGTPWEVQPGQKKRPN 328
            MI AL+KAGVKPN KT RGL+LAPTRELAKQISDNLT YTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLM ELA +YLTD VRVQVNPPGQAVKKINQS+H+VAQAAK+DLL+ELLD HRDELA+VFGRTKHGCEKLYK LE+KGFAAASIHGNKSQGQR RA+D FKAGK RVLVATDVAARG+DIP VR+VYN+DLPNVAENYVHRIGRTARAGA+G+AVA  APDE+++L+DIEKAMK+ IPVASG PWE+QPGQKKRPN
Sbjct:   59 MIHALLKAGVKPNPKTTRGLILAPTRELAKQISDNLTAYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMGELAGTYLTDAVRVQVNPPGQAVKKINQSVHFVAQAAKTDLLIELLDKHRDELAIVFGRTKHGCEKLYKVLENKGFAAASIHGNKSQGQRQRALDAFKAGKTRVLVATDVAARGLDIPDVRFVYNYDLPNVAENYVHRIGRTARAGADGSAVALVAPDEMIELQDIEKAMKDTIPVASGRPWEIQPGQKKRPN 386

[Close]

BLAST of dead deah box helicase vs. nr
Match: gi|942089727|ref|WP_055293921.1| (ATP-dependent helicase [Loktanella sp. 1ANDIMAR09] >gi|941331318|gb|KQB96931.1| DEAD/DEAH box helicase [Loktanella sp. 1ANDIMAR09])

HSP 1 Score: 599.742 bits (1545), Expect = 0.000e+0
Identity = 304/365 (83.29%), Postives = 325/365 (89.04%), Query Frame = 0

Query:    1 MIDALMKAGVKPNAKTVRGLVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIEKAMKEVIPVASGTPWEVQPGQKKRPNGGGGGGGRRGAGGGGGGAGGRNRAAGGGKPGGGGGKP 365
            MI AL+KAGVKPN KT RGL+LAPTRELAKQISDNLT YTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLM ELA +YLTD VRVQVNPPGQAVKKINQS+H+VAQAAK+DLL+ELLD HRDELA+VFGRTKHGCEKLYK LE+KGFAAASIHGNKSQGQR RA+D FKAGK RVLVATDVAARG+DIP VR+VYN+DLPNVAENYVHRIGRTARAGA+G+AVA  APDE+++L+DIEKAMK+ IPVASG PWE+QPGQKKRPN     GG  G   G GG          GKP GG GKP
Sbjct:   59 MIHALLKAGVKPNPKTTRGLILAPTRELAKQISDNLTAYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMGELAGTYLTDAVRVQVNPPGQAVKKINQSVHFVAQAAKTDLLIELLDKHRDELAIVFGRTKHGCEKLYKVLENKGFAAASIHGNKSQGQRQRALDAFKAGKTRVLVATDVAARGLDIPDVRFVYNYDLPNVAENYVHRIGRTARAGADGSAVALVAPDEMIELQDIEKAMKDTIPVASGRPWEIQPGQKKRPN-----GGGGGGRRGAGGGSRGGAPRASGKPSGGQGKP 418

[Close]

BLAST of dead deah box helicase vs. nr
Match: gi|1222144469|ref|WP_090199860.1| (ATP-dependent helicase [Loktanella tamlensis] >gi|1097240360|emb|SFR46095.1| ATP-dependent RNA helicase RhlE [Loktanella tamlensis])

HSP 1 Score: 598.201 bits (1541), Expect = 0.000e+0
Identity = 290/328 (88.41%), Postives = 312/328 (95.12%), Query Frame = 0

Query:    1 MIDALMKAGVKPNAKTVRGLVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIEKAMKEVIPVASGTPWEVQPGQKKRPN 328
            MI+AL+KAGVKPNAKT RGL+LAPTRELAKQI+DNLT YTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDL+DRRAVRLDETIYLVLDEADQMLDMGFIHALR+IAPLLAKDRQTMMFSATMPKLMAELA++YL D VRVQVNPPGQAVKKI QS+H+VAQAAK+DLL+ELLD HRDELALVFGRTKHGCEKLYK LE+KGFAAASIHGNKSQGQR RAI  FKAGKVRVLVATDVAARGIDIP VR+VYN+DLPNVA+NYVHRIGRTARAGAEG+AVA  APDE+++L+DIEK MKE IPVASG PWE+QPGQKKRPN
Sbjct:   59 MINALLKAGVKPNAKTARGLILAPTRELAKQIADNLTAYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLIDRRAVRLDETIYLVLDEADQMLDMGFIHALRQIAPLLAKDRQTMMFSATMPKLMAELAETYLRDAVRVQVNPPGQAVKKIAQSVHFVAQAAKTDLLIELLDKHRDELALVFGRTKHGCEKLYKVLENKGFAAASIHGNKSQGQRDRAITAFKAGKVRVLVATDVAARGIDIPDVRHVYNYDLPNVADNYVHRIGRTARAGAEGSAVALVAPDEMIELQDIEKTMKETIPVASGRPWEIQPGQKKRPN 386

[Close]

BLAST of dead deah box helicase vs. nr
Match: gi|800970109|ref|WP_045996774.1| (ATP-dependent helicase [Loktanella sp. S4079] >gi|798773776|gb|KJZ20759.1| DEAD/DEAH box helicase [Loktanella sp. S4079])

HSP 1 Score: 596.275 bits (1536), Expect = 0.000e+0
Identity = 291/328 (88.72%), Postives = 310/328 (94.51%), Query Frame = 0

Query:    1 MIDALMKAGVKPNAKTVRGLVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIEKAMKEVIPVASGTPWEVQPGQKKRPN 328
            MI+AL+KAGVKPNAKT RGLVLAPTRELAKQI++NLT YTKGSHLKVALVVGGAGIV QTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMAELAD+YLTD VRVQVNPPGQA +KI QS+H+VAQAAK+DLLVELLD HRDELALVFGRTKHGCEKLYK LE KGFAAASIHGNKSQGQR RAI  FK GKVRVLVATDVAARGIDIPGVR+VYN+DLPNVA+NYVHRIGRTARAGA+G+AVA  APDE+++L+DIEK MKE IPVASG PWE+QPGQKKRPN
Sbjct:   59 MINALLKAGVKPNAKTARGLVLAPTRELAKQIAENLTAYTKGSHLKVALVVGGAGIVGQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMAELADTYLTDAVRVQVNPPGQAARKIAQSVHFVAQAAKTDLLVELLDKHRDELALVFGRTKHGCEKLYKVLEKKGFAAASIHGNKSQGQRDRAITAFKEGKVRVLVATDVAARGIDIPGVRHVYNYDLPNVADNYVHRIGRTARAGADGSAVALVAPDEMIELQDIEKVMKENIPVASGRPWEIQPGQKKRPN 386

[Close]

BLAST of dead deah box helicase vs. nr
Match: gi|495508702|ref|WP_008233348.1| (ATP-dependent helicase [Roseobacter sp. CCS2] >gi|126715470|gb|EBA12335.1| putative ATP-dependent RNA helicase, putative [Roseobacter sp. CCS2])

HSP 1 Score: 595.89 bits (1535), Expect = 0.000e+0
Identity = 289/328 (88.11%), Postives = 309/328 (94.21%), Query Frame = 0

Query:    1 MIDALMKAGVKPNAKTVRGLVLAPTRELAKQISDNLTNYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMAELADSYLTDPVRVQVNPPGQAVKKINQSLHYVAQAAKSDLLVELLDAHRDELALVFGRTKHGCEKLYKFLESKGFAAASIHGNKSQGQRTRAIDDFKAGKVRVLVATDVAARGIDIPGVRYVYNFDLPNVAENYVHRIGRTARAGAEGNAVAFCAPDEIVDLKDIEKAMKEVIPVASGTPWEVQPGQKKRPN 328
            MI ALMKAGVKPN KT RGL+LAPTRELAKQI+DNLT YTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLM ELA +YLTD VRVQVNPPGQAVKKINQS+H+VAQAAK+DLL+ELLD HRDELA+VFGRTKHGCEKLYK LE KGFAAASIHGNKSQGQR RA++ FK+GK RVLVATDVAARG+DIP VR+VYN+DLPNVAENYVHRIGRTARAGA+G+AVA  APDE+++LKDIEKAMKE IPVASG  WE+QPGQKKRPN
Sbjct:   59 MIHALMKAGVKPNPKTSRGLILAPTRELAKQIADNLTAYTKGSHLKVALVVGGAGIVAQTKRLAGGVDLLVATPGRLIDLLDRRAVRLDETIYLVLDEADQMLDMGFIHALRRIAPLLAKDRQTMMFSATMPKLMGELAGTYLTDAVRVQVNPPGQAVKKINQSVHFVAQAAKTDLLIELLDKHRDELAIVFGRTKHGCEKLYKVLEKKGFAAASIHGNKSQGQRQRALEAFKSGKTRVLVATDVAARGLDIPDVRFVYNYDLPNVAENYVHRIGRTARAGADGSAVALVAPDEMIELKDIEKAMKETIPVASGREWEIQPGQKKRPN 386

The following BLAST results are available for this feature:

BLAST of dead deah box helicase vs. L. salmonis genes
BLAST of dead deah box helicase vs. SwissProt
BLAST of dead deah box helicase vs. nr

BLAST of dead deah box helicase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25


Match Name	E-value	Identity	Description
EMLSAG00000005110	4.246e-69	43.29	supercontig:LSalAtl2s:LSalAtl2s26:913218:916036:-1...	[more]
EMLSAG00000002581	3.579e-63	40.40	supercontig:LSalAtl2s:LSalAtl2s151:1305107:1306803...	[more]
EMLSAG00000002458	6.723e-63	39.74	supercontig:LSalAtl2s:LSalAtl2s1472:18624:24320:1 ...	[more]
EMLSAG00000004918	2.772e-61	42.49	supercontig:LSalAtl2s:LSalAtl2s259:1039310:1040989...	[more]
EMLSAG00000010143	5.548e-61	42.49	supercontig:LSalAtl2s:LSalAtl2s66:712270:714003:-1...	[more]
EMLSAG00000011189	1.366e-59	38.36	supercontig:LSalAtl2s:LSalAtl2s760:470421:474651:1...	[more]
EMLSAG00000008048	1.216e-58	37.46	supercontig:LSalAtl2s:LSalAtl2s479:213954:217803:1...	[more]
EMLSAG00000000846	3.549e-57	37.62	supercontig:LSalAtl2s:LSalAtl2s1142:195200:196664:...	[more]
EMLSAG00000009885	1.101e-56	40.52	supercontig:LSalAtl2s:LSalAtl2s643:195185:200626:1...	[more]
EMLSAG00000011390	1.343e-56	38.83	supercontig:LSalAtl2s:LSalAtl2s787:174367:180499:1...	[more]

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BLAST of dead deah box helicase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|548730\|sp\|P25888.3\|RHLE_ECOLI	1.494e-93	47.81	RecName: Full=ATP-dependent RNA helicase RhlE	[more]
gi\|123643052\|sp\|Q49Z29.1\|CSHA_STAS1	1.810e-78	44.33	RecName: Full=DEAD-box ATP-dependent RNA helicase ...	[more]
gi\|81673916\|sp\|Q5HME0.1\|CSHA_STAEQ	1.023e-77	44.95	RecName: Full=DEAD-box ATP-dependent RNA helicase ...	[more]
gi\|81768862\|sp\|Q8Y8N0.1\|CSHA_LISMO	1.173e-77	40.89	RecName: Full=ATP-dependent RNA helicase CshA	[more]
gi\|81843521\|sp\|Q8CRP6.1\|CSHA_STAES	1.253e-77	44.95	RecName: Full=DEAD-box ATP-dependent RNA helicase ...	[more]
gi\|134039178\|sp\|P96614.2\|CSHA_BACSU	1.523e-77	43.77	RecName: Full=DEAD-box ATP-dependent RNA helicase ...	[more]
gi\|123660708\|sp\|Q4L7W0.1\|CSHA_STAHJ	2.044e-77	44.29	RecName: Full=DEAD-box ATP-dependent RNA helicase ...	[more]
gi\|81648913\|sp\|Q6G7M9.1\|CSHA_STAAS	3.380e-77	44.64	RecName: Full=DEAD-box ATP-dependent RNA helicase ...	[more]
gi\|81650664\|sp\|Q6GEZ3.1\|CSHA_STAAR	3.761e-77	44.64	RecName: Full=DEAD-box ATP-dependent RNA helicase ...	[more]
gi\|123548216\|sp\|Q2YUH3.1\|CSHA_STAAB	3.883e-77	44.64	RecName: Full=DEAD-box ATP-dependent RNA helicase ...	[more]

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BLAST of dead deah box helicase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1199470545\|ref\|WP_087209324.1\|	0.000e+0	87.74	ATP-dependent helicase [Loktanella vestfoldensis] ...	[more]
gi\|648660564\|ref\|WP_026352311.1\|	0.000e+0	84.24	ATP-dependent helicase [Loktanella vestfoldensis]	[more]
gi\|84510401\|gb\|EAQ06857.1\|	0.000e+0	86.65	DEAD/DEAH box helicase [Loktanella vestfoldensis S...	[more]
gi\|750179260\|ref\|WP_040483334.1\|	0.000e+0	86.65	ATP-dependent helicase [Loktanella vestfoldensis]	[more]
gi\|944380592\|ref\|WP_055686450.1\|	0.000e+0	85.21	ATP-dependent helicase [Loktanella sp. 5RATIMAR09]...	[more]
gi\|1140799947\|ref\|WP_076659372.1\|	0.000e+0	88.41	ATP-dependent helicase [Loktanella rosea] >gi\|1133...	[more]
gi\|942089727\|ref\|WP_055293921.1\|	0.000e+0	83.29	ATP-dependent helicase [Loktanella sp. 1ANDIMAR09]...	[more]
gi\|1222144469\|ref\|WP_090199860.1\|	0.000e+0	88.41	ATP-dependent helicase [Loktanella tamlensis] >gi\|...	[more]
gi\|800970109\|ref\|WP_045996774.1\|	0.000e+0	88.72	ATP-dependent helicase [Loktanella sp. S4079] >gi\|...	[more]
gi\|495508702\|ref\|WP_008233348.1\|	0.000e+0	88.11	ATP-dependent helicase [Roseobacter sp. CCS2] >gi\|...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold1528_size37208	supercontig	scaffold1528_size37208:11927..13081 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold1528_size37208-processed-gene-0.1-mRNA-1	snap_masked-scaffold1528_size37208-processed-gene-0.1-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold1528_size37208:11927..13081+

gene from alignment at scaffold1528_size37208:11927..13081+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold1528_size37208-processed-gene-0.1 ID=snap_masked-scaffold1528_size37208-processed-gene-0.1|Name=dead deah box helicase|organism=Tigriopus kingsejongensis|type=gene|length=1155bp|location=Sequence derived from alignment at scaffold1528_size37208:11927..13081+ (Tigriopus kingsejongensis)
ATGATTGATGCGCTGATGAAAGCGGGCGTGAAGCCCAATGCAAAAACCGT
GCGTGGTTTGGTGCTGGCACCGACGCGCGAACTTGCCAAACAGATTTCAG
ACAATCTGACAAATTATACCAAAGGCAGCCATTTGAAAGTGGCTTTGGTC
GTTGGCGGAGCGGGTATTGTCGCCCAAACCAAGCGTTTGGCGGGTGGTGT
TGACCTGCTTGTTGCGACACCGGGACGTTTGATCGACCTGCTGGACCGGC
GTGCAGTGCGGCTGGACGAGACGATTTATCTTGTCTTGGACGAGGCCGAT
CAGATGCTGGACATGGGCTTTATCCACGCGCTGCGCCGGATTGCGCCGCT
ACTGGCCAAAGATCGCCAAACGATGATGTTCTCGGCGACGATGCCAAAAC
TGATGGCAGAGCTTGCCGACAGCTACCTGACTGATCCCGTGCGGGTGCAG
GTCAACCCTCCGGGGCAAGCGGTGAAGAAGATCAACCAGTCGCTGCATTA
TGTCGCGCAGGCGGCGAAATCCGACCTGCTGGTCGAATTGCTGGACGCGC
ATCGTGACGAATTGGCGCTGGTTTTCGGGCGCACGAAACATGGGTGCGAA
AAACTGTATAAGTTCCTTGAAAGCAAGGGTTTTGCGGCGGCCTCTATCCA
TGGGAACAAATCCCAAGGGCAGCGGACGCGAGCAATTGATGATTTCAAGG
CGGGCAAGGTGCGGGTCTTGGTCGCGACCGACGTTGCGGCGCGCGGCATT
GATATTCCGGGCGTGCGATATGTTTATAATTTCGACCTGCCGAATGTGGC
GGAAAACTATGTGCACCGGATCGGTCGGACAGCGCGTGCCGGTGCGGAAG
GCAACGCGGTTGCGTTCTGTGCTCCCGACGAGATTGTCGATCTTAAAGAC
ATCGAAAAAGCGATGAAAGAGGTAATCCCTGTCGCCTCTGGCACCCCGTG
GGAGGTCCAGCCGGGCCAGAAAAAACGCCCCAATGGCGGTGGCGGTGGTG
GCGGACGTCGCGGTGCAGGCGGTGGCGGCGGTGGTGCTGGCGGACGCAAT
CGGGCTGCTGGCGGCGGTAAACCTGGCGGCGGTGGCGGTAAACCGGGTGG
TCAGCGCAAGCGTAAACCGCCAACCGGGCGCGGTCGTAGTTCTGCGGCTG
CTTAA

Synonyms

The feature 'dead deah box helicase' has the following synonyms


Synonym
Tk08287

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