tetratricopeptide repeat protein 4, snap_masked-scaffold179_size282488-processed-gene-0.7 (gene) Tigriopus kingsejongensis

Overview
Nametetratricopeptide repeat protein 4
Unique Namesnap_masked-scaffold179_size282488-processed-gene-0.7
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of tetratricopeptide repeat protein 4 vs. L. salmonis genes
Match: EMLSAG00000001297 (supercontig:LSalAtl2s:LSalAtl2s1214:78815:81076:1 gene:EMLSAG00000001297 transcript:EMLSAT00000001297 description:"maker-LSalAtl2s1214-augustus-gene-0.44")

HSP 1 Score: 340.502 bits (872), Expect = 3.913e-115
Identity = 175/399 (43.86%), Postives = 253/399 (63.41%), Query Frame = 0
Query:    1 MDPEKLEAAMQNMSPAERQALAAKMDREMDEYMAQMEASGSKYMDGWSPENWEKEMEQHPFFAQNLQAGQELPPLLKGIQDLKYSPDENTPAELAQSYKEDGNFNFKCKKYRFAVASYTEGLKHRCEDQLLNSQLLTNRAAAQFRLKNFRSALIDCRLALVRTPTHLKALLKGAESAWELQRFEECVQLCDQGILSHPEEAQFVERRQQAVLKAKELERNARREAAQLKQSQHEERLLLEA----IRGRGIQVVTA--KGQSGLSLENLEPTHPAALR-KRVHFSPADPAVLVWPALFIYPEHGETDFVEAFEENQIFADHLQAMFGPEAPSAPWDLDHKYVPERLALQFEDVTAQKLVPVDAQV-TLKSVLSDPRYRLVGGTPGIIVTVRGSKFESDF 391
            MD   L   M NM   +R  L  KMD+E+D+Y+  +E++ S+Y++GWS +NWEKEME+HPFFA +   G EL PL++GIQD+KYSPDEN+P ELA +YKEDGN+ FK KKYR AVASY+EGLK+      L + LLTNRAAAQ+ LKN+RS+L+D R A+  TP+HLKAL++GA+ + EL R++EC++ C++ + + P+  +  + + +A  K  E ERN R+EA ++    H+E +LLE+    I  R I +V +  K QS L+L++L P HP A   KR+H +      LVWP +F+YPE  ++DF++   E+    DH+  +F PE     WD +  YV   +   F  +    LV +D +    + VL D RY ++ G P II+    S F  D+
Sbjct:    1 MDYAGLREKMANMDETQRMTLMEKMDKELDQYIESLESNSSRYVEGWSKDNWEKEMEEHPFFATSSNEG-ELSPLMQGIQDIKYSPDENSPLELALNYKEDGNYGFKYKKYRIAVASYSEGLKYTKYLPDLRTTLLTNRAAAQYYLKNYRSSLMDARFAIRTTPSHLKALIRGAKCSMELSRYKECIEWCERILANDPDNEEIKDIKTKAFSKKSEQERNERKEALRI----HKESILLESLLSEITSRKINLVFSKHKDQSELTLQDLIPVHPFAPEAKRLHLNGPH---LVWPVMFVYPEFQQSDFIQELSEDDYIFDHIYVVFNPEDEPPIWDTNQHYVASEVEAFFRHMEKDSLVKIDLKKHKFRDVLCDHRYSVIDGLPEIIILSPKSSFYRDY 391          
BLAST of tetratricopeptide repeat protein 4 vs. L. salmonis genes
Match: EMLSAG00000000201 (supercontig:LSalAtl2s:LSalAtl2s1029:98442:113044:-1 gene:EMLSAG00000000201 transcript:EMLSAT00000000201 description:"maker-LSalAtl2s1029-snap-gene-1.47")

HSP 1 Score: 58.151 bits (139), Expect = 2.210e-9
Identity = 36/97 (37.11%), Postives = 53/97 (54.64%), Query Frame = 0
Query:   92 AELAQSYKEDGNFNFKCKKYRFAVASYTEGLKHRCEDQLLNSQLLTNRAAAQFRLKNFRSALIDCRLALVRTPTHLKALLKGAESAWELQRFEECVQ 188
            A+L +  KEDGN  FK  K   A   YTE L+    + L N++L  NRA    +L     ++ DC  AL    ++LKAL++ A+S  +LQ +E  V+
Sbjct:  568 AKLLKQKKEDGNKAFKSSKLSNAYTLYTEALQIDPLNSLANAKLFFNRATVVAKLGKLEQSIEDCNSALELDESYLKALMRRAKSYMDLQDYENAVK 664          
BLAST of tetratricopeptide repeat protein 4 vs. L. salmonis genes
Match: EMLSAG00000010347 (supercontig:LSalAtl2s:LSalAtl2s685:51126:60163:-1 gene:EMLSAG00000010347 transcript:EMLSAT00000010347 description:"maker-LSalAtl2s685-augustus-gene-0.11")

HSP 1 Score: 51.9878 bits (123), Expect = 2.213e-7
Identity = 40/147 (27.21%), Postives = 72/147 (48.98%), Query Frame = 0
Query:   99 KEDGNFNFKCKKYRFAVASYTEGLKHRCEDQLLNSQLLTNRAAAQFRLKNFRSALIDCRLALVRTPTHLKALLKGAESAWELQRFEECVQLCDQGILSHPEEAQFVERRQQAVLKAKELE-RNARREAAQLKQSQHEERLLLEAIRG 244
            K  GN  FK  +Y+ AV  YTEGLK  C+ +  ++ L  NR  A  +L   + A  DC LA++  P + KA ++ A +   L+R+ + +   ++ +   P+        ++ + K  E +  N+ +E     +S  EE +    ++G
Sbjct:  448 KNKGNEFFKKGEYQRAVDCYTEGLK--CDPK--SAILAANRGMALLKLNREKEAEKDCTLAIMLDPNYAKAYIRRAYARSGLKRYSDAINDYEKVLQIEPKNKMAKTEIEKLIRKKDEAKNNNSNKEKTTKSKSSFEENMKNAFLKG 590          
BLAST of tetratricopeptide repeat protein 4 vs. SwissProt
Match: gi|182701417|sp|Q5EA11.2|TTC4_BOVIN (RecName: Full=Tetratricopeptide repeat protein 4; Short=TPR repeat protein 4)

HSP 1 Score: 232.646 bits (592), Expect = 1.060e-71
Identity = 145/389 (37.28%), Postives = 211/389 (54.24%), Query Frame = 0
Query:   17 ERQALAAKMDREMDEYMAQMEASGSKYMDGWSPENWEKEMEQHPFFAQNLQAGQELPPL----LKGIQDLKYSPDENTPAELAQSYKEDGNFNFKCKKYRFAVASYTEGLKHRCEDQLLNSQLLTNRAAAQFRLKNFRSALIDCRLALVRTPTHLKALLKGAESAWELQRFEECVQLCDQGILSHPEEAQFVERRQQAVLKAKELERNARREAAQLKQSQHEERLLLEAIRGRGIQVV----------TAKGQSGLSLENLEPTHPAALRKRVHFSPADPAVLVWPALFIYPEHGETDFVEAFEENQIFADHLQAMFGPEAPSAPWDLDHKYVPERLALQFEDVTAQKLVPVDAQVTLKSVLSDPRYRLVGGTPGIIVTVRGSKFESDF 391
            E+Q   A +D  MD ++ + ++    Y  G+    WE+E E+ P F +N  +  E+ PL    L  +Q + +  +E +P + A++YK++GN  FK K Y+ AV SYTEGLK +C D  LN+ L TNRAAAQ+ L NFRS+L D   A    P HLKA+++GA    EL+ + E V  CD+G+     E + ++ R +A    +  +R+ R+   + K+ Q +   LL+AI+ R I++V           ++G S L L  L   +P   R  V     D   L WP LF+YPE+ ++D V AF E+  F DHL  MFG E PS  WDL+ KY P+ L + FED    +L  V    TL  VL  PRY +   TP  +V V  S F  ++
Sbjct:    2 EQQEPGATLDDGMDSFLEKFQSQ--PYRGGFHESQWEEEFEKIPLFMKN--SPSEIDPLENPDLACLQSIIFD-EERSPEDQARTYKDEGNDYFKEKDYKKAVISYTEGLKKKCADPDLNAVLYTNRAAAQYYLGNFRSSLNDVTAARKLKPCHLKAIIRGASCHLELKNYVEAVNWCDEGLQIDATEKKLLDLRAKADKLKRTEQRDVRKAKLKEKKQQDQNEALLQAIKARNIRLVAEAAGEDEDSASEGLSELVLYGLSSENPCGARLGVD----DQGRLSWPVLFLYPEYAQSDLVSAFHEDSRFIDHLMVMFG-ETPS--WDLEQKYCPDNLEVYFEDEDRAELYCVPPSSTLLQVLQHPRYFVKALTPTFLVCVGSSGFCRNY 378          
BLAST of tetratricopeptide repeat protein 4 vs. SwissProt
Match: gi|145559537|sp|O95801.3|TTC4_HUMAN (RecName: Full=Tetratricopeptide repeat protein 4; Short=TPR repeat protein 4)

HSP 1 Score: 226.868 bits (577), Expect = 1.729e-69
Identity = 144/379 (37.99%), Postives = 207/379 (54.62%), Query Frame = 0
Query:   26 DREMDEYMAQMEASGSKYMDGWSPENWEKEMEQHPFFAQNLQAGQELPPL----LKGIQDLKYSPDENTPAELAQSYKEDGNFNFKCKKYRFAVASYTEGLKHRCEDQLLNSQLLTNRAAAQFRLKNFRSALIDCRLALVRTPTHLKALLKGAESAWELQRFEECVQLCDQGILSHPEEAQFVERRQQAVLKAKELERNARREAAQLKQSQHEERLLLEAIRGRGIQVVTA---------KGQSGLSLENLEPTHPAALRKRVHFSPADPAVLVWPALFIYPEHGETDFVEAFEENQIFADHLQAMFGPEAPSAPWDLDHKYVPERLALQFEDVTAQKLVPVDAQVTLKSVLSDPRYRLVGGTPGIIVTVRGSKFESDF 391
            D  MD ++ + ++    Y  G+  + WEKE E+ P F    +A  E+ P     L  +Q + +  +E +P E A++YK++GN  FK K Y+ AV SYTEGLK +C D  LN+ L TNRAAAQ+ L NFRSAL D   A    P HLKA+++GA    EL+ F E V  CD+G+    +E + +E R +A    +  +R+ R+   + K+ +++   LL+AI+ R I++  A         +G   L L+ L   +P   R     S      L WP LF+YPE+ ++DF+ AF E+  F DHL  MFG E PS  WDL+ KY P+ L + FED    +L  V A+ TL  VL   RY +   TP  +V V  S F  +F
Sbjct:   11 DDVMDSFLEKFQSQ--PYRGGFHEDQWEKEFEKVPLFMS--RAPSEIDPRENPDLACLQSIIFD-EERSPEEQAKTYKDEGNDYFKEKDYKKAVISYTEGLKKKCADPDLNAVLYTNRAAAQYYLGNFRSALNDVTAARKLKPCHLKAIIRGALCHLELKHFAEAVNWCDEGLQIDAKEKKLLEMRAKADKLKRIEQRDVRKANLKEKKERNQNEALLQAIKARNIRLSEAACEDEDSASEGLGELFLDGLSTENPHGAR----LSLDGQGRLSWPVLFLYPEYAQSDFISAFHEDSRFIDHLMVMFG-ETPS--WDLEQKYCPDNLEVYFEDEDRAELYRVPAKSTLLQVLQHQRYFVKALTPAFLVCVGSSPFCKNF 377          
BLAST of tetratricopeptide repeat protein 4 vs. SwissProt
Match: gi|23396888|sp|Q8R3H9.1|TTC4_MOUSE (RecName: Full=Tetratricopeptide repeat protein 4; Short=TPR repeat protein 4)

HSP 1 Score: 225.713 bits (574), Expect = 4.271e-69
Identity = 141/374 (37.70%), Postives = 204/374 (54.55%), Query Frame = 0
Query:   26 DREMDEYMAQMEASGSKYMDGWSPENWEKEMEQHPFFAQNL--QAGQELPPLLKGIQDLKYSPDENTPAELAQSYKEDGNFNFKCKKYRFAVASYTEGLKHRCEDQLLNSQLLTNRAAAQFRLKNFRSALIDCRLALVRTPTHLKALLKGAESAWELQRFEECVQLCDQGILSHPEEAQFVERRQQAVLKAKELERNARREAAQLKQSQHEERLLLEAIRGRGIQVVT----------AKGQSGLSLENLEPTHPAALRKRVHFSPADPAVLVWPALFIYPEHGETDFVEAFEENQIFADHLQAMFGPEAPSAPWDLDHKYVPERLALQFEDVTAQKLVPVDAQVTLKSVLSDPRYRLVGGTPGIIVTVRGSKF 387
            D  MD ++ + ++    Y  G+  + WE+E ++ P F +    +   E  P L  +Q + +  D+  P E A++YK++GN  FK K Y+ AV SY+EGLK +C D  LN+ L TNRAAAQ+ L N RS+L D   A    P HLKA+++GA    EL+ F E V  CD+G+    +E + +E R +A    +  ER+ R+   + K+ QH+   LL+AI+ R I++V+          + G + + L+ L   +P   R     S  D   L WP LF+YPE+ ++DF+ AF E+  F DHL AMF  EAPS  WD +HKY PE L + FED    +L  V    TL  VL  PR  +   TP  +V V  S F
Sbjct:   11 DASMDAFLEKFQSQ--PYRGGFREDQWEEEFDKIPLFMKKAPSEIDPEEFPDLACLQSMIFD-DDRYPEEQAKTYKDEGNDYFKEKDYKKAVLSYSEGLKKKCADPDLNAVLYTNRAAAQYYLGNVRSSLNDVLAAKKLKPGHLKAIIRGALCHLELKHFAEAVNWCDEGLQIDAKEKKLLEIRAKADKLKRMEERDLRKAKLKEKKEQHQNEALLQAIKARNIRLVSESAGEDEDSASNGPAEILLDGLSSENPYGAR----LSIDDQGRLSWPVLFLYPEYAQSDFISAFHEDTRFIDHLMAMFS-EAPS--WDSEHKYHPENLEVYFEDEDRAELYQVSPDSTLLQVLQHPRCCVKALTPAFLVCVGSSPF 374          
BLAST of tetratricopeptide repeat protein 4 vs. SwissProt
Match: gi|74996786|sp|Q54M20.1|TTC4_DICDI (RecName: Full=Tetratricopeptide repeat protein 4 homolog; Short=TPR repeat protein 4 homolog)

HSP 1 Score: 130.954 bits (328), Expect = 3.836e-33
Identity = 106/397 (26.70%), Postives = 178/397 (44.84%), Query Frame = 0
Query:   17 ERQALAAKMDREMDEYMAQMEASGSKYMD-GWSPENWEKEMEQHPFFAQNLQAGQELPPLLKGIQDLKYSPDENTPAELAQSYKEDGNFNFKCKKYRF--AVASYTEGLKHRCEDQLLNSQLLTNRAAAQFRLKNFRSALIDCRLALVRTPTHLKALLKGAESAWELQRFEECVQLCDQGILSHPEEAQFVERRQQAVLKAKELERNAR----REAAQLKQSQHEERLLLEAIRGR-GIQVVTAKGQSGLSLENLEPTHPAALRKRVHFSPADPAVLVWPALFIYPEHGETDFVEAFEENQIFADHLQAMFGPEAPS-APWDLDHKYVPERLALQFE---------DV----TAQKLVPVDAQVTLKSVLSDPRYRLVGGTPGIIVTVRGSKFESDF 391
            ER  +A K  +E      + + S  + +D G  P +++ + +  P F Q L         L   Q L    ++ TP E A+++K  GN  F+  K RF  A+  Y + L  +C D   NS  L+NRAA    L N+   + DC +++   P ++KA  + A +  +L ++++ ++ CD G+   P        R+ A  K +++++  +    +E    +Q Q     L E  + + G Q+      +  S   +           VHF          P +F+YPE G++DF+  F+E+  F DHLQ MF PE P  APWD   +Y  +R+ + FE         D+      +K + V     +  V+S P Y ++   P   +  RG+ F   F
Sbjct:   20 ERSVIAWKQQKE------ERKKSNQELIDRGEKPIDYDNDWKDLPIFMQELPEEPSSNQYLAAFQSLS---NDCTPEERAETFKNLGNDYFREGKSRFNDALYYYNKALSVKCNDMTKNSIYLSNRAAINMELGNYGLVIKDCTVSVEFNPLNMKAYSRMARAQLQLSKYQDSIKTCDLGLSHEPTNKDLSTIRENANKKLQDIKKREQDKIDKENQLKQQQQLLATKLYEKNKYKLGHQIFDMSQYTYQSDRKVTIDQ----NNDVHF----------PVVFLYPEFGKSDFIMDFQEDHTFGDHLQMMFPPENPEFAPWDTKKEYTMDRIEVYFETNWTKPILSDIKIKEIEKKWIRVKHTTDIAKVISHPTY-IIPEIPIFYIVSRGNLFYKKF 392          
BLAST of tetratricopeptide repeat protein 4 vs. SwissProt
Match: gi|74675923|sp|O13754.1|CNS1_SCHPO (RecName: Full=Hsp70/Hsp90 co-chaperone cns1)

HSP 1 Score: 117.857 bits (294), Expect = 1.484e-28
Identity = 100/357 (28.01%), Postives = 172/357 (48.18%), Query Frame = 0
Query:   55 EMEQHPFFAQNLQ-AGQELPP--LLKGIQDLKYSPDENTPAELAQSYKEDGNFNFKCKKYRFAVASYTEGLKHRCEDQLLNSQLLTNRAAAQFRLKNFRSALIDCRLALVRTPTHLKALLKGAESAWELQRFE---ECVQLCDQGILSHPEEAQFVERRQQAVLKAKELERNARREAAQLKQSQHE---ERLLLEAIRGRGIQVVTAK-----GQSGLSLENLEPTHPAALRKRVHFSPADP-AVLVWPALFIYPEHGETDFVEAFEENQIFADHLQAMFGPEAPSAPWDLDHKYVPERLALQFEDVTAQKLVPVDAQVTLKSVLSDPRYRLVGGTPGIIVTVRGSKFESDFQSKYK 396
            E+ + PFF Q+L+  G E      L  ++ L Y   E  P E+AQ+++E GN  F  K+Y+ A   YT+ L  +C D+ +     +NRAA     +N+R  L DC   L R  TH KA  + A++   L+R++   EC++LC    L HP +   +   ++   K+ + E   +RE+ + + +Q +    + +L A++ R I+  T +     G + +SL   +                DP + L +P + +YP   ++DFV +  EN    + L+ +F  ++P APWD+   Y P+ L + F       L+ V   V +   L+ P+  L+ G   + + V      SD+ S +K
Sbjct:   24 ELNKVPFFMQSLEDVGDESENNVQLDALKALAY---EGEPHEVAQNFREHGNECFASKRYKDAEEFYTKALAQKCGDKDIEIACYSNRAACNLLFENYRQVLNDCAQVLQRDSTHAKAYYRSAKALVALKRYDEAKECIRLCS---LVHPNDPAILALSKELQKKSDDFE---KRESEKKRVAQEKVIAAKTVLLALQERHIKTKTTEHPPDLGDAMISLSTFD----------------DPKSELFFPTILLYPLVYQSDFVPSVSENCTPLELLKTVF--QSP-APWDVHQLYNPDSLDV-FATTDTLGLIKVGKNVPILKALTHPKVTLIDGL--VQLHVVPHHLASDWISSWK 349          
BLAST of tetratricopeptide repeat protein 4 vs. SwissProt
Match: gi|465507|sp|P33313.1|CNS1_YEAST (RecName: Full=Hsp70/Hsp90 co-chaperone CNS1; AltName: Full=Cyclophilin seven suppressor 1; AltName: Full=STI1 stress-inducible protein homolog)

HSP 1 Score: 102.064 bits (253), Expect = 8.332e-23
Identity = 92/338 (27.22%), Postives = 158/338 (46.75%), Query Frame = 0
Query:   41 SKYMDGWSPENWEKEMEQHPFFAQNLQ----AGQELPPLLKGIQDLKYSPDENTPAELAQSYKEDGNFNFKCKKYRFAVASYTEGLKHRCEDQLLNSQLLTNRAAAQFRLKNFRSALIDCRLALVRTPTHLKALLKGAESAWELQRFEE---CVQLCDQGILSHPEEAQFVERRQQAVLKAKELERNARREAAQLK-QSQHEERLLLEAIRGRGIQVVTAKGQSGLSLENLEPTHPAALRKRVHFSPADP----AVLVWPALFIYPEHGETDFVEAFEENQIFADHLQAMFGPEAPSAPWDLDHK--YVPERLALQFEDVTAQKLVPVDAQVTLKSVL 364
            S++ D  S E   KEM + PFF   L     AG E   L + ++ L Y   E  P E+A+++K+ GN  +K K+++ A   Y++GL   CED+ +N  L  NRAA +  LKN+R  + DC  AL   P ++K   + +++ ++L + EE        +Q I   PE    +     +V+  KE E  A+ E  Q + Q +  ++++LE+              +  ++ N++   P  L         DP    + L++PAL +YP   E DFV    E     + +  +   E P   +  + K  + P+++ L F +  A  L+    ++T   +L
Sbjct:   30 SEFKDKTSDEIL-KEMNRMPFFMTKLDETDGAGGENVEL-EALKALAY---EGEPHEIAENFKKQGNELYKAKRFKDARELYSKGLAVECEDKSINESLYANRAACELELKNYRRCIEDCSKALTINPKNVKCYYRTSKAFFQLNKLEEAKSAATFANQRI--DPENKSIL--NMLSVIDRKEQELKAKEEKQQREAQERENKKIMLES------------AMTLRNITNIKTHSPVELLNEGKIRLEDPMDFESQLIYPALIMYPTQDEFDFVGEVSELTTVQELVDLVL--EGPQERFKKEGKENFTPKKV-LVFMETKAGGLIKAGKKLTFHDIL 343          
BLAST of tetratricopeptide repeat protein 4 vs. SwissProt
Match: gi|158564023|sp|Q9H6T3.2|RPAP3_HUMAN (RecName: Full=RNA polymerase II-associated protein 3)

HSP 1 Score: 57.7658 bits (138), Expect = 8.250e-8
Identity = 49/160 (30.63%), Postives = 77/160 (48.12%), Query Frame = 0
Query:   99 KEDGNFNFKCKKYRFAVASYTEGLKHRCEDQLLNSQLLTNRAAAQFRLKNFRSALIDCRLALVRTPTHLKALLKGAESAWELQRFEECVQLCDQGILSHPE--EAQFVERRQQAVLKAKE---------LERNARREAAQLKQSQHEERLLLEAIRGRGI 247
            KE GN  FK  KY  A+  YT+G+    +    N  L TNRA+A FRLK F  A  DC LA+    ++ KA  +   + + LQ+ EE  +  ++ +   P   EA    R+    L +KE         + ++   E  Q++  Q++++ + E  RG G 
Sbjct:  137 KEKGNKYFKQGKYDEAIDCYTKGM----DADPYNPVLPTNRASAYFRLKKFAVAESDCNLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLELEPNNFEATNELRKISQALASKENSYPKEADIVIKSTEGERKQIEAQQNKQQAISEKDRGNGF 292          
BLAST of tetratricopeptide repeat protein 4 vs. SwissProt
Match: gi|81917075|sp|Q9D706.1|RPAP3_MOUSE (RecName: Full=RNA polymerase II-associated protein 3)

HSP 1 Score: 57.7658 bits (138), Expect = 9.218e-8
Identity = 35/88 (39.77%), Postives = 48/88 (54.55%), Query Frame = 0
Query:   99 KEDGNFNFKCKKYRFAVASYTEGLKHRCEDQLLNSQLLTNRAAAQFRLKNFRSALIDCRLALVRTPTHLKALLKGAESAWELQRFEEC 186
            KE GN  FK  KY  A+  YT+G+    +    N  L TNRA+A FRLK F  A  DC LA+  + T+ KA  +   + + LQ+ E+ 
Sbjct:  138 KEKGNKYFKQGKYDEAIECYTKGM----DADPYNPVLPTNRASAYFRLKKFAVAESDCNLAIALSRTYTKAYARRGAARFALQKLEDA 221          
BLAST of tetratricopeptide repeat protein 4 vs. SwissProt
Match: gi|74896918|sp|Q54IP0.1|DNJC7_DICDI (RecName: Full=DnaJ homolog subfamily C member 7 homolog)

HSP 1 Score: 56.9954 bits (136), Expect = 1.278e-7
Identity = 36/121 (29.75%), Postives = 64/121 (52.89%), Query Frame = 0
Query:   96 QSYKEDGNFNFKCKKYRFAVASYTEGLKHRCEDQLLNSQLLTNRAAAQFRLKNFRSALIDCRLALVRTPTHLKALLKGAESAWELQRFEECVQLCDQGILSHPEEAQFVERRQQAVLKAKE 216
            +S K++GN  F+ K Y+ A  S+TE L    + + +NSQL +NRAAA   L     A+ DC  A+   P + KA ++ A+   + + +E+ V+  ++     PE  +     ++A +  K+
Sbjct:  236 ESKKKEGNEYFQSKNYQAAYDSFTEALSIDPKLETMNSQLYSNRAAALVHLNRISEAINDCTSAVTIDPNYGKAYIRRAQCQMKQENYEDAVRDYEKAQSLDPENGELQRNIKEAKIAHKK 356          
BLAST of tetratricopeptide repeat protein 4 vs. SwissProt
Match: gi|81910765|sp|Q68FQ7.1|RPAP3_RAT (RecName: Full=RNA polymerase II-associated protein 3)

HSP 1 Score: 56.225 bits (134), Expect = 2.788e-7
Identity = 34/88 (38.64%), Postives = 48/88 (54.55%), Query Frame = 0
Query:   99 KEDGNFNFKCKKYRFAVASYTEGLKHRCEDQLLNSQLLTNRAAAQFRLKNFRSALIDCRLALVRTPTHLKALLKGAESAWELQRFEEC 186
            KE GN  FK  KY  A+  YT+G+    +    N  L TNRA+A FRLK F  A  DC LA+  + ++ KA  +   + + LQ+ E+ 
Sbjct:  137 KEKGNKYFKQGKYDEAIECYTKGM----DADPYNPVLPTNRASAYFRLKKFAVAESDCNLAIALSRSYTKAYARRGAARFALQKLEDA 220          
BLAST of tetratricopeptide repeat protein 4 vs. nr
Match: gi|1325286187|ref|XP_023327818.1| (tetratricopeptide repeat protein 4-like [Eurytemora affinis])

HSP 1 Score: 374.4 bits (960), Expect = 1.407e-124
Identity = 187/384 (48.70%), Postives = 259/384 (67.45%), Query Frame = 0
Query:   13 MSPAERQALAAKMDREMDEYMAQMEAS-----GSKYMDGWSPENWEKEMEQHPFFAQNLQAGQELPPLLKGIQDLKYSPDENTPAELAQSYKEDGNFNFKCKKYRFAVASYTEGLKHRCEDQLLNSQLLTNRAAAQFRLKNFRSALIDCRLALVRTPTHLKALLKGAESAWELQRFEECVQLCDQGILSHPEEAQFVERRQQAVLKAKELERNARREAAQLKQSQHEERLLLEAIRGRGIQVVTAKGQSGLSLENLEPTHPAALRKRVHFSPADPAVLVWPALFIYPEHGETDFVEAFEENQIFADHLQAMFGPEAPSAPWDLDHKYVPERLALQFEDVTAQKLVPVDAQVTLKSVLSDPRYRLVGGTPGIIVTVRGSKFESDF 391
            M+  ER+ +  KMD++++E+  ++E       G +   G++ ENWE+EM  HPFF Q  + G+EL PL+KGIQDLKYSPDEN+P ELAQ+YKEDGNFNFKCKKYRFA+ASYTEGLK +CED LLN+QLLTNRA  Q+ +KN+RS L DC +A+  TPTH+KA+L+GA+++++L+++  C+  CD+G+   P++A  ++ R  AV  +KE ER+ R+  A  K+ + EER +L  I+ +GI+V   KG   LSL + EP HPAA+ K VH   +    LV+P LF+YPE GETDFVE + E++    H+Q MFG  A   PWD + +YVP  L +  E    QKL+ +    TL S ++ P + L  GTP  IV VR SK   +F
Sbjct:    9 MTDEERKKMVEKMDQDLEEHFRKLEEKAKEREGRRMEGGFTEENWEEEMAAHPFFNQQWKEGEELSPLMKGIQDLKYSPDENSPLELAQNYKEDGNFNFKCKKYRFAIASYTEGLKSKCEDNLLNTQLLTNRAVCQYHIKNYRSCLKDCDVAIELTPTHMKAILRGAQASFQLKQYPLCLIWCDRGLKLDPKDADLIKLRSDAVRISKEQERDERKRTAVEKKKKEEERKILNEIKSKGIKVEKIKGNE-LSLADFEPCHPAAIHKPVHMD-SGTGELVFPVLFLYPEFGETDFVEEWRESETLEQHIQEMFGDSAERPPWDTEKRYVPASLVVYLESYD-QKLLEISTSSTLLSAITKPGFLLKAGTPNFIVFVRNSKSHINF 389          
BLAST of tetratricopeptide repeat protein 4 vs. nr
Match: gi|225718604|gb|ACO15148.1| (Tetratricopeptide repeat protein 4 [Caligus clemensi])

HSP 1 Score: 335.109 bits (858), Expect = 4.263e-109
Identity = 170/399 (42.61%), Postives = 255/399 (63.91%), Query Frame = 0
Query:    1 MDPEKLEAAMQNMSPAERQALAAKMDREMDEYMAQMEASGSKYMDGWSPENWEKEMEQHPFFAQNL-QAGQELPPLLKGIQDLKYSPDENTPAELAQSYKEDGNFNFKCKKYRFAVASYTEGLKHRCEDQLLNSQLLTNRAAAQFRLKNFRSALIDCRLALVRTPTHLKALLKGAESAWELQRFEECVQLCDQGILSHPEEAQFVERRQQAVLKAKELERNARREAAQLKQSQHEERLLLEAIRGRGIQVVTAKGQS--GLSLENLEPTHPAALR-KRVHFSPADPAVLVWPALFIYPEHGETDFVEAFEENQIFADHLQAMFGPEAPSAPWDLDHKYVPERLALQFEDVTAQKLVPVD-AQVTLKSVLSDPRYRLVGGTPGIIVTVRGSKFESDFQSK 394
            MD + L   M NM  ++R+    KMDRE+D+Y+  +E++ S+Y+DGW  ++WEKEME HPFFA +  Q   E+ PL++GIQDLKYSP+EN+P ELA +YKEDGN+ F+ KKYR A+ +Y+EGLK+  E   L + LL NRA+A F L N+RS+L+D RLA+   P+HLKAL++GA+ A EL R+EE ++ CD+ +   P   +    R + + K  E ERN R++A  LK+ + +   L++ I+ RGIQ+  +K +     SLE+L P HP A + +RVH        L+WP +F+YPE  ++DF++ F E  +F DH+ A+F P+A   PWD  + Y+P  +   F+      +V ++  + +LK VL D R+ +V G P II+  R S+F  ++  K
Sbjct:    1 MDIKGLREQMANMDESQRRVFLEKMDRELDQYIDGLESNSSRYVDGWYEDSWEKEMEDHPFFATSASQKDSEMSPLMQGIQDLKYSPEENSPEELAINYKEDGNYGFRFKKYRIAICAYSEGLKYSKELPELRATLLNNRASAHFYLGNYRSSLMDARLAVKTDPSHLKALIRGAKCASELSRYEESMEFCDKVLSLFPGHEEIRALRSKVLTKKSEKERNERKKALHLKKEKTDFDSLMKEIKTRGIQLSFSKRKDPEDCSLEDLVPVHPYAPQAQRVHLREGS---LIWPLIFVYPEFHQSDFIQEFSEEDLFRDHINAVFDPQAEPPPWDSQNHYLPSEVQAFFKVAERDSIVKIETGKQSLKDVLCDKRFCVVDGLPEIIILSRKSEFYMEYIKK 396          
BLAST of tetratricopeptide repeat protein 4 vs. nr
Match: gi|1227995439|ref|XP_021929518.1| (tetratricopeptide repeat protein 4 isoform X1 [Zootermopsis nevadensis])

HSP 1 Score: 330.102 bits (845), Expect = 3.158e-107
Identity = 173/385 (44.94%), Postives = 240/385 (62.34%), Query Frame = 0
Query:   12 NMSPAERQALAAKMDREMDEYMAQMEASGSKYMDGWSPENWEKEMEQHPFFAQNL-QAGQELPPLLKGIQDLKYSPDENTPAELAQSYKEDGNFNFKCKKYRFAVASYTEGLKHRCEDQLLNSQLLTNRAAAQFRLKNFRSALIDCRLALVRTPTHLKALLKGAESAWELQRFEECVQLCDQGILSHPEEAQFVERRQQAVLKAKELERNARREAAQLKQSQHEERLLLEAIRGRGIQVVTAKGQSGLSLENLEPTHPAALRKRVHFSPADPAVLVWPALFIYPEHGETDFVEAFEENQIFADHLQAMFGPEAPSAPWDLDHKYVPERLALQFEDVTAQKLVPVDAQVTLKSVLSDPRYRLVGGTPGIIVTVRGSKFESDFQSKY 395
             MS  ER+ LA K+D+E+DE++  +E     Y +GW  + WE+EME+HPFF     +AG+ L PL++G+Q LKYS  +NTP +LA +YKEDGN+NFK KKYR A+ SYTEGL+ RC D  L S+L  NRAAA F LKN+RS L DCR AL   P + KA  + A+    LQR+++C+ LC++ ++  P +   +E R +A+   K  ERNAR++    ++ +  ++ LL AI+ RGIQ+   KG + LS+  LEP  P   + RVH    D   LVWP +F+YPE+  TDFV+ F E+  F+ HL  MF  E+P   WD D  Y+   L + +E  + + L PVDA  TL  VL    Y + GGTP  +VTVRGSK E    ++Y
Sbjct:   15 TMSNEERKKLAEKLDQELDEFIGGLEKRS--YTEGWPEDRWEEEMEKHPFFMSKAPEAGEPLSPLMEGLQQLKYSETDNTPQDLAAAYKEDGNYNFKLKKYRLAIISYTEGLRQRCGDSHLESELYNNRAAAHFFLKNYRSCLFDCRAALKIRPCYSKAQARAAQCCMFLQRYDDCITLCEKMLVDCPTDKTTLELRAKAMAGKKIEERNARKQNMAKRKEEERDQALLTAIKERGIQI---KG-TDLSMSTLEPCSPMVAQGRVHLD--DSGSLVWPVMFLYPEYQVTDFVQEFHEDNTFSQHLSTMF--ESP-PEWDKDSSYILSELNIYYECQSDRTLHPVDACDTLGQVLPKQSYVVCGGTPCFLVTVRGSKAECCLLARY 388          
BLAST of tetratricopeptide repeat protein 4 vs. nr
Match: gi|1227995441|ref|XP_021929519.1| (tetratricopeptide repeat protein 4 isoform X2 [Zootermopsis nevadensis] >gi|1227995443|ref|XP_021929520.1| tetratricopeptide repeat protein 4 isoform X2 [Zootermopsis nevadensis] >gi|646707755|gb|KDR14373.1| Tetratricopeptide repeat protein 4 [Zootermopsis nevadensis])

HSP 1 Score: 329.331 bits (843), Expect = 3.813e-107
Identity = 173/385 (44.94%), Postives = 240/385 (62.34%), Query Frame = 0
Query:   12 NMSPAERQALAAKMDREMDEYMAQMEASGSKYMDGWSPENWEKEMEQHPFFAQNL-QAGQELPPLLKGIQDLKYSPDENTPAELAQSYKEDGNFNFKCKKYRFAVASYTEGLKHRCEDQLLNSQLLTNRAAAQFRLKNFRSALIDCRLALVRTPTHLKALLKGAESAWELQRFEECVQLCDQGILSHPEEAQFVERRQQAVLKAKELERNARREAAQLKQSQHEERLLLEAIRGRGIQVVTAKGQSGLSLENLEPTHPAALRKRVHFSPADPAVLVWPALFIYPEHGETDFVEAFEENQIFADHLQAMFGPEAPSAPWDLDHKYVPERLALQFEDVTAQKLVPVDAQVTLKSVLSDPRYRLVGGTPGIIVTVRGSKFESDFQSKY 395
             MS  ER+ LA K+D+E+DE++  +E     Y +GW  + WE+EME+HPFF     +AG+ L PL++G+Q LKYS  +NTP +LA +YKEDGN+NFK KKYR A+ SYTEGL+ RC D  L S+L  NRAAA F LKN+RS L DCR AL   P + KA  + A+    LQR+++C+ LC++ ++  P +   +E R +A+   K  ERNAR++    ++ +  ++ LL AI+ RGIQ+   KG + LS+  LEP  P   + RVH    D   LVWP +F+YPE+  TDFV+ F E+  F+ HL  MF  E+P   WD D  Y+   L + +E  + + L PVDA  TL  VL    Y + GGTP  +VTVRGSK E    ++Y
Sbjct:    2 TMSNEERKKLAEKLDQELDEFIGGLEKRS--YTEGWPEDRWEEEMEKHPFFMSKAPEAGEPLSPLMEGLQQLKYSETDNTPQDLAAAYKEDGNYNFKLKKYRLAIISYTEGLRQRCGDSHLESELYNNRAAAHFFLKNYRSCLFDCRAALKIRPCYSKAQARAAQCCMFLQRYDDCITLCEKMLVDCPTDKTTLELRAKAMAGKKIEERNARKQNMAKRKEEERDQALLTAIKERGIQI---KG-TDLSMSTLEPCSPMVAQGRVHLD--DSGSLVWPVMFLYPEYQVTDFVQEFHEDNTFSQHLSTMF--ESPPE-WDKDSSYILSELNIYYECQSDRTLHPVDACDTLGQVLPKQSYVVCGGTPCFLVTVRGSKAECCLLARY 375          
BLAST of tetratricopeptide repeat protein 4 vs. nr
Match: gi|1238863754|ref|XP_013780202.2| (LOW QUALITY PROTEIN: tetratricopeptide repeat protein 4-like [Limulus polyphemus])

HSP 1 Score: 328.176 bits (840), Expect = 1.771e-106
Identity = 166/384 (43.23%), Postives = 235/384 (61.20%), Query Frame = 0
Query:   13 MSPAERQALAAKMDREMDEYMAQMEASGSKYMDGWSPENWEKEMEQHPFF-AQNLQAGQELPPLLKGIQDLKYSPDENTPAELAQSYKEDGNFNFKCKKYRFAVASYTEGLKHRCEDQLLNSQLLTNRAAAQFRLKNFRSALIDCRLALVRTPTHLKALLKGAESAWELQRFEECVQLCDQGILSHPEEAQFVERRQQAVLKAKELERNARREAAQLKQSQHEERLLLEAIRGRGIQVVTAKGQSGL----SLENLEPTHPAALRKRVHFSPADPAVLVWPALFIYPEHGETDFVEAFEENQIFADHLQAMFGPEAPSAPWDLDHKYVPERLALQFEDVTAQKLVPVDAQVTLKSVLSDPRYRLVGGTPGIIVTVRGSKFESDF 391
            M+  +R  L   MD+++D Y+  M+    KY DGWS +NWE+EM++HP F  + L   +ELPP ++ +Q LKY  +ENT  ELA +YK+DGN NF+ KKY +A+ SYTEGLK RC +  LN+QLLTNRAAA F + N+RS+  D   AL   P H+K   +G     E+ RF++CV  CD+G+   P     +E R++A  + K  ERN R+ A + K+    +  L++AI+ RGI++ T  G +      +L  L+P HPAA   +VH    +   L+WP LF+YPE+GE+DF+EAF E+  FADHL+ MFG      PWD++ KY+P  + + FED+       VD   TL+ VLSDPRY +  G P  ++ VR S F   F
Sbjct:    8 MTEEDRHRLVQDMDKDLDNYLKNMKPK--KYADGWSEDNWEQEMQEHPAFRTEPLDETRELPPWIEALQQLKYDSEENTAEELALNYKDDGNENFRLKKYHWAIKSYTEGLKQRCSNTELNAQLLTNRAAANFHIGNYRSSFNDTEAALKLKPNHMKLSERGP-VLLEVGRFKDCVVWCDKGLKLEPGNQTLLELRKKASNEQKVAERNKRKAALEEKEKLKVDEKLIKAIQERGIKLFTKFGSTKTCSVETLSFLQPVHPAAASSKVH--QDENGALLWPVLFLYPEYGESDFIEAFHEDSRFADHLEVMFGSSDVHPPWDVEKKYLPSDIEIYFEDIKKSTHCKVDTSHTLRQVLSDPRYYVTAGNPTFLLIVRNSSFHKKF 386          
BLAST of tetratricopeptide repeat protein 4 vs. nr
Match: gi|1022778235|gb|KZS21729.1| (Tetratricopeptide repeat protein 4 [Daphnia magna])

HSP 1 Score: 320.087 bits (819), Expect = 2.728e-103
Identity = 173/390 (44.36%), Postives = 238/390 (61.03%), Query Frame = 0
Query:   11 QNMSPAERQALAAKMDREMDEYMAQMEASGSKYMDGWSPENWEKEMEQHPFFAQNL-QAGQELPPLLKGIQDLKYSPDENTPAELAQSYKEDGNFNFKCKKYRFAVASYTEGLKHRCEDQLLNSQLLTNRAAAQFRLKNFRSALIDCRLALVRTPTHLKALLKGAESAWELQRFEECVQLCDQGILSHPEEAQFVERRQQAVLKAKELERNARREAAQLKQSQHEERLLLEAIRGR----GIQVVTAKGQSGLSLENLEPTHPAALRKRVHFSPADPAVLVWPALFIYPEHGETDFVEAFEENQIFADHLQAMFGPEAPSAPWDLDHKYVPERLALQFEDVTAQKLVPVDAQVTLKSVLSDPRYRLVGGTPGIIVTVRGSKFESDFQSKY 395
            ++MS  E+  LA K+D++++E++   +   + Y +GW  E WE+EMEQHPFF + L + G+ LPPLL+  Q LKY PDENT  +LA +YK DGNFNFK KKYRFA+A+YTEGLK +C +  L + L  NRAA QF L N+RS+L D   A    P + KA+++ A+   +L+R+ E ++ CD GI     +   V+ R + V   K  ERN R+     K+ Q     L+ A+R R    GI+     G++ L L ++EP HPAA+ KRVH        LVWP LF+YPE+GETDFV+ F E+  F DHLQ MF  E+P   WDL+ KY P  + + +E   + KL  VD   +LK VLS   Y + GGTPG I  V  S F+ DF ++Y
Sbjct:    6 KDMSEEEKHQLALKLDQDLEEFINSRK--NTPYSEGWKEETWEQEMEQHPFFMKKLPEEGEPLPPLLEAFQQLKYDPDENTTEDLALAYKNDGNFNFKLKKYRFAIANYTEGLKQKCGNVELEANLYLNRAACQFHLGNYRSSLNDSLQAAKLKPDYTKAIVRAAQCCLQLKRYAEGLKWCDYGIRLKNSDPALVKLRTELVQGQKLEERNKRKAEIAEKKEQASINELVNALRIRSIATGIKGKRDGGKTTLDLSSIEPCHPAAIGKRVHLV---GDALVWPVLFLYPEYGETDFVQEFHEDSCFMDHLQMMF-EESPL--WDLEKKYNPTSIRMYYEHRESGKLYVVDPNCSLKEVLSQKTYIVQGGTPGFICLVEASPFQKDFLNRY 387          
BLAST of tetratricopeptide repeat protein 4 vs. nr
Match: gi|1339078643|ref|XP_023726750.1| (tetratricopeptide repeat protein 4 isoform X1 [Cryptotermes secundus] >gi|1339078645|ref|XP_023726751.1| tetratricopeptide repeat protein 4 isoform X1 [Cryptotermes secundus] >gi|1330872767|gb|PNF13811.1| Tetratricopeptide repeat protein 4 [Cryptotermes secundus] >gi|1330872768|gb|PNF13812.1| Tetratricopeptide repeat protein 4 [Cryptotermes secundus] >gi|1330872769|gb|PNF13813.1| Tetratricopeptide repeat protein 4 [Cryptotermes secundus] >gi|1330872771|gb|PNF13815.1| Tetratricopeptide repeat protein 4 [Cryptotermes secundus])

HSP 1 Score: 317.775 bits (813), Expect = 2.075e-102
Identity = 169/385 (43.90%), Postives = 235/385 (61.04%), Query Frame = 0
Query:   13 MSPAERQALAAKMDREMDEYMAQMEASGSKYMDGWSPENWEKEMEQHPFF-AQNLQAGQELPPLLKGIQDLKYSPDENTPAELAQSYKEDGNFNFKCKKYRFAVASYTEGLKHRCEDQLLNSQLLTNRAAAQFRLKNFRSALIDCRLALVRTPTHLKALLKGAESAWELQRFEECVQLCDQGILSHPEEAQFVERRQQAVLKAKELERNARREAAQLKQSQHEERLLLEAIRGRGIQVVTAKGQSGLSLENLEPTHPAALRKRVHFSPADPAVLVWPALFIYPEHGETDFVEAFEENQIFADHLQAMFGPEAPSAP-WDLDHKYVPERLALQFEDVTAQKLVPVDAQVTLKSVLSDPRYRLVGGTPGIIVTVRGSKFESDFQSKY 395
            MS  +R+ LA K+D+E+DE++  +E   S   D W  + W++EME+HPFF  +  +AG+ L PL++G+Q LKYS  +NTP ELA +YKEDGN+NFK KKYR A+ SYTEGLK RC D +L S+L  NRAAA F LKN+RS L DCR AL     + KA ++ A+    LQR++EC+ LCD+ +L  P +   +E R +AV   K  ERN R++    ++ + +E+ LL AI+ RGI +   +    LS+  LEP+ P   +  VH        LVWP +F+YPE+  +D V+ F E+  F+ HL AMF     S P WD D  Y+P  L + +E      L  V A  TL  VL+   Y + GGTP  +VTVRGSK E +  ++Y
Sbjct:   16 MSDEKRRRLAEKLDQELDEFIGGLEKRSS--TDEWPEDRWQEEMEKHPFFMTKTPEAGEPLSPLMEGLQQLKYSETDNTPQELAATYKEDGNYNFKIKKYRLAIMSYTEGLKQRCGDSVLESELYNNRAAAHFFLKNYRSCLFDCRAALKIRSCYPKAQVRAAQCCMFLQRYDECIALCDKMLLGSPTDKVSLELRARAVAGKKMEERNIRKQNVSERKEKEKEQALLRAIKERGIHIEGTE----LSMAALEPSSPVVAQGHVHLD--GKGSLVWPVMFLYPEYEVSDLVQEFCEDDTFSQHLTAMF----ESTPDWDKDSSYIPSELNIYYECRGRHTLHQVTASGTLGEVLARETYVVYGGTPCFLVTVRGSKVEQNLLARY 388          
BLAST of tetratricopeptide repeat protein 4 vs. nr
Match: gi|321465321|gb|EFX76323.1| (hypothetical protein DAPPUDRAFT_306258 [Daphnia pulex])

HSP 1 Score: 312.768 bits (800), Expect = 1.810e-100
Identity = 168/389 (43.19%), Postives = 238/389 (61.18%), Query Frame = 0
Query:   12 NMSPAERQALAAKMDREMDEYMAQMEASGSKYMDGWSPENWEKEMEQHPFFAQNL-QAGQELPPLLKGIQDLKYSPDENTPAELAQSYKEDGNFNFKCKKYRFAVASYTEGLKHRCEDQLLNSQLLTNRAAAQFRLKNFRSALIDCRLALVRTPTHLKALLKGAESAWELQRFEECVQLCDQGILSHPEEAQFVERRQQAVLKAKELERNARREAAQLKQSQHEERLLLEAIRGRGIQVVTAKGQSG----LSLENLEPTHPAALRKRVHFSPADPAVLVWPALFIYPEHGETDFVEAFEENQIFADHLQAMFGPEAPSAPWDLDHKYVPERLALQFEDVTAQKLVPVDAQVTLKSVLSDPRYRLVGGTPGIIVTVRGSKFESDFQSKY 395
            +M+  E+  LA K+D++++E++   +   + Y +GW+ E WE+EMEQHPFF + L + G+ LPPLL+  Q LKY P+ENT  +LA SYK+DGNFNFK KKYRFA+A+YTEGLK +C +  +++ L  NRAA QF L N+RS+L D   A    P + KA+++ A+   +L+R+ +  + CD GI     +   V+ R + V   K  ERN R+E    ++ +     L+ A+R RGI     + +      L L ++EP HPAA+ KRVH        LVWP LF+YPE+GETDFV+ F E+  F DHLQ MF  E P   WDL+ KY P  + + +E   + KL  VD   +LK+VLS   Y + GGTPG I  V GS F+ +F  +Y
Sbjct:    7 HMTDEEKHQLALKLDQDLEEFINARK--NTPYSEGWNEETWEQEMEQHPFFMKKLPEEGEPLPPLLEAFQQLKYDPEENTTEDLALSYKDDGNFNFKLKKYRFAIANYTEGLKQKCGNVEIDATLYLNRAACQFHLGNYRSSLNDSLQAAKLKPDYTKAVVRAAQCCLKLKRYADGQKWCDYGIRLKNTDPSLVKLRTELVQGQKLEERNKRKEEIAERKEEALINELVTALRVRGINTGIKRKKDSERAILDLSSIEPCHPAAIGKRVHLV---DGCLVWPVLFLYPEYGETDFVQEFHEDTCFMDHLQLMF-EELPL--WDLEKKYNPASIRMYYEHRDSGKLHVVDPNCSLKTVLSQKTYVVQGGTPGFICLVEGSPFQKEFLKRY 387          
BLAST of tetratricopeptide repeat protein 4 vs. nr
Match: gi|759051879|ref|XP_011335068.1| (PREDICTED: tetratricopeptide repeat protein 4 [Ooceraea biroi])

HSP 1 Score: 311.612 bits (797), Expect = 5.983e-100
Identity = 156/383 (40.73%), Postives = 235/383 (61.36%), Query Frame = 0
Query:   14 SPAERQALAAKMDREMDEYMAQMEASGSKYMDGWSPENWEKEMEQHPFFAQNL-QAGQELPPLLKGIQDLKYSPDENTPAELAQSYKEDGNFNFKCKKYRFAVASYTEGLKHRCEDQLLNSQLLTNRAAAQFRLKNFRSALIDCRLALVRTPTHLKALLKGAESAWELQRFEECVQLCDQGILSHPEEAQFVERRQQAVLKAKELERNARREAAQLKQSQHEERLLLEAIRGRGIQVVTAKGQSGLSLENLEPTHPAALRKRVHFSPADPAVLVWPALFIYPEHGETDFVEAFEENQIFADHLQAMFGPEAPSAPWDLDHKYVPERLALQFEDVTAQKLVPVDAQVTLKSVLSDPRYRLVGGTPGIIVTVRGSKFESDFQSKY 395
            + AER  LAAK+D E+DEY++ +E     Y +GW  + W++EME+HPFF +   +  +EL PL++G+Q LKY  DENTP ELA +YKEDGNFN+K KKYR A+ SYTEG+K +C+D  L +QL  NRAAA F L+N+RS+L DC+L L   P + KAL + A  ++ ++ +++C+ LCDQ +   P +   ++ +  A    +   R+ R++    ++  +E+  LLEAI  RGI + T  G+  L L++LEP  P   + RVHF   D   LVWP + +YPE  +TDF++ F E+    +HL  +F  E P   WD+ H Y  E + + FE      +  VD Q+TL  +L + ++ + GGTP  ++ V+ S+ E  F + Y
Sbjct:   11 TEAERLELAAKLDAELDEYISNLEKKS--YTEGWPEDKWQEEMEKHPFFMKKAPEPDEELSPLMEGLQQLKYGEDENTPEELANNYKEDGNFNYKYKKYRLAILSYTEGIKTKCKDDNLMAQLYNNRAAAHFMLQNYRSSLNDCKLTLKLNPQYWKALNRAATCSYHIKNYDQCIDLCDQFLNHSPTDKAILKLKSGAAAARERFLRDKRKQEKLERKLDNEKEKLLEAIWQRGINLETTDGKRNLELKDLEPQAPQIAQCRVHFDEKDK--LVWPVIILYPESQQTDFIQNFHEDASLIEHLAKLF-EEPPE--WDVKHHYTVENINVYFEGKNKCSVHKVDVQLTLNKILQNKQFIVRGGTPAFLIFVKSSEAEQSFLTNY 386          
BLAST of tetratricopeptide repeat protein 4 vs. nr
Match: gi|998515714|ref|XP_015518603.1| (PREDICTED: tetratricopeptide repeat protein 4, partial [Neodiprion lecontei])

HSP 1 Score: 309.686 bits (792), Expect = 3.016e-99
Identity = 159/389 (40.87%), Postives = 231/389 (59.38%), Query Frame = 0
Query:    8 AAMQNMSPAERQALAAKMDREMDEYMAQMEASGSKYMDGWSPENWEKEMEQHPFFAQNL-QAGQELPPLLKGIQDLKYSPDENTPAELAQSYKEDGNFNFKCKKYRFAVASYTEGLKHRCEDQLLNSQLLTNRAAAQFRLKNFRSALIDCRLALVRTPTHLKALLKGAESAWELQRFEECVQLCDQGILSHPEEAQFVERRQQAVLKAKELERNARREAAQLKQSQHEERLLLEAIRGRGIQVVTAKGQSGLSLENLEPTHPAALRKRVHFSPADPAVLVWPALFIYPEHGETDFVEAFEENQIFADHLQAMFGPEAPSAPWDLDHKYVPERLALQFEDVTAQKLVPVDAQVTLKSVLSDPRYRLVGGTPGIIVTVRGSKFESDFQSKY 395
            A  ++ +  ER  LAAK+D E+D+Y+  +E    +Y +GW  + WE EM++HPFF +   Q G EL PL++G+Q LKY  +ENTP ELA +YKEDGNFNFK K YR A+  YTEG++ +C+D  L +QL  NRAAA + L+N+RS+L DC+ AL   P + KAL + A    +++ +++C+  CDQ +   P E   +  R +AV   K+LER+ RR  A  K+   EE  LLE I+ RG+ +    G+  L L +LEP  P   + RVH    +   LVWP + +YPE  +TDF++ F E+      L+ +F  E P   WD   +Y PE L + FE    + +  +D + TL  +L+D R+ L GGTP  +V V  S+ E  F + Y
Sbjct:    3 AKKKSWTENERLELAAKLDAELDDYINNLEQK--QYTEGWPEDRWEAEMDKHPFFMKKAPQVGDELSPLMEGLQQLKYDENENTPEELANNYKEDGNFNFKYKNYRLAIMGYTEGIRTKCKDGDLMAQLYNNRAAAHYMLQNYRSSLNDCKHALKLKPDYPKALNRAANCCSQIKDYDQCITYCDQFLEKSPSEKVILNLRNEAVANKKKLERDKRRTDALAKKINREEETLLEIIQSRGVNIELDSGKRHLQLSDLEPCIPQIAQNRVHL--MEDGRLVWPVIILYPETQQTDFIQEFHEDTRLITQLKELF--EEPPG-WDTGRRYYPENLNVYFEGKGKRTVHKIDVEATLGKILADQRFELRGGTPAFLVLVASSEAEKRFLANY 384          
The following BLAST results are available for this feature:
BLAST of tetratricopeptide repeat protein 4 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 3
Match NameE-valueIdentityDescription
EMLSAG000000012973.913e-11543.86supercontig:LSalAtl2s:LSalAtl2s1214:78815:81076:1 ... [more]
EMLSAG000000002012.210e-937.11supercontig:LSalAtl2s:LSalAtl2s1029:98442:113044:-... [more]
EMLSAG000000103472.213e-727.21supercontig:LSalAtl2s:LSalAtl2s685:51126:60163:-1 ... [more]
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BLAST of tetratricopeptide repeat protein 4 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
gi|182701417|sp|Q5EA11.2|TTC4_BOVIN1.060e-7137.28RecName: Full=Tetratricopeptide repeat protein 4; ... [more]
gi|145559537|sp|O95801.3|TTC4_HUMAN1.729e-6937.99RecName: Full=Tetratricopeptide repeat protein 4; ... [more]
gi|23396888|sp|Q8R3H9.1|TTC4_MOUSE4.271e-6937.70RecName: Full=Tetratricopeptide repeat protein 4; ... [more]
gi|74996786|sp|Q54M20.1|TTC4_DICDI3.836e-3326.70RecName: Full=Tetratricopeptide repeat protein 4 h... [more]
gi|74675923|sp|O13754.1|CNS1_SCHPO1.484e-2828.01RecName: Full=Hsp70/Hsp90 co-chaperone cns1[more]
gi|465507|sp|P33313.1|CNS1_YEAST8.332e-2327.22RecName: Full=Hsp70/Hsp90 co-chaperone CNS1; AltNa... [more]
gi|158564023|sp|Q9H6T3.2|RPAP3_HUMAN8.250e-830.63RecName: Full=RNA polymerase II-associated protein... [more]
gi|81917075|sp|Q9D706.1|RPAP3_MOUSE9.218e-839.77RecName: Full=RNA polymerase II-associated protein... [more]
gi|74896918|sp|Q54IP0.1|DNJC7_DICDI1.278e-729.75RecName: Full=DnaJ homolog subfamily C member 7 ho... [more]
gi|81910765|sp|Q68FQ7.1|RPAP3_RAT2.788e-738.64RecName: Full=RNA polymerase II-associated protein... [more]

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BLAST of tetratricopeptide repeat protein 4 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1325286187|ref|XP_023327818.1|1.407e-12448.70tetratricopeptide repeat protein 4-like [Eurytemor... [more]
gi|225718604|gb|ACO15148.1|4.263e-10942.61Tetratricopeptide repeat protein 4 [Caligus clemen... [more]
gi|1227995439|ref|XP_021929518.1|3.158e-10744.94tetratricopeptide repeat protein 4 isoform X1 [Zoo... [more]
gi|1227995441|ref|XP_021929519.1|3.813e-10744.94tetratricopeptide repeat protein 4 isoform X2 [Zoo... [more]
gi|1238863754|ref|XP_013780202.2|1.771e-10643.23LOW QUALITY PROTEIN: tetratricopeptide repeat prot... [more]
gi|1022778235|gb|KZS21729.1|2.728e-10344.36Tetratricopeptide repeat protein 4 [Daphnia magna][more]
gi|1339078643|ref|XP_023726750.1|2.075e-10243.90tetratricopeptide repeat protein 4 isoform X1 [Cry... [more]
gi|321465321|gb|EFX76323.1|1.810e-10043.19hypothetical protein DAPPUDRAFT_306258 [Daphnia pu... [more]
gi|759051879|ref|XP_011335068.1|5.983e-10040.73PREDICTED: tetratricopeptide repeat protein 4 [Ooc... [more]
gi|998515714|ref|XP_015518603.1|3.016e-9940.87PREDICTED: tetratricopeptide repeat protein 4, par... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold179_size282488supercontigscaffold179_size282488:3266..4456 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold179_size282488-processed-gene-0.7-mRNA-1snap_masked-scaffold179_size282488-processed-gene-0.7-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold179_size282488:3266..4456-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold179_size282488-processed-gene-0.7 ID=snap_masked-scaffold179_size282488-processed-gene-0.7|Name=tetratricopeptide repeat protein 4|organism=Tigriopus kingsejongensis|type=gene|length=1191bp|location=Sequence derived from alignment at scaffold179_size282488:3266..4456- (Tigriopus kingsejongensis)
ATGGATCCGGAGAAGCTGGAGGCGGCCATGCAGAACATGAGCCCGGCGGA GCGGCAGGCTCTGGCCGCGAAGATGGACCGGGAGATGGACGAGTACATGG CCCAGATGGAGGCCTCCGGCTCCAAGTACATGGACGGCTGGAGTCCGGAG AATTGGGAGAAGGAGATGGAGCAGCATCCCTTCTTCGCCCAGAATCTGCA GGCGGGCCAGGAGCTGCCGCCTCTGCTCAAGGGCATCCAGGACCTCAAAT ACTCGCCCGACGAGAACACGCCCGCCGAGCTGGCTCAGAGCTACAAGGAG GACGGGAACTTCAACTTCAAGTGCAAGAAGTACCGCTTCGCCGTGGCCTC CTACACCGAGGGGCTCAAGCATCGCTGCGAGGACCAGCTCCTCAACAGCC AGTTGCTCACCAATCGGGCGGCGGCTCAGTTTCGCCTCAAGAACTTCCGC TCGGCCCTCATCGACTGTCGCCTGGCCTTGGTCCGGACGCCCACGCACCT CAAGGCCCTGCTCAAGGGGGCCGAGAGCGCCTGGGAGCTCCAGCGCTTCG AGGAGTGCGTCCAGCTCTGCGATCAAGGGATCTTGAGCCATCCGGAGGAG GCCCAATTCGTGGAGCGGCGCCAGCAAGCCGTGCTCAAGGCCAAGGAGCT GGAGCGGAACGCCCGCCGCGAGGCCGCCCAGCTCAAGCAGAGCCAGCACG AGGAGCGCTTGCTCCTCGAGGCCATCCGAGGCCGGGGCATCCAGGTGGTG ACGGCCAAAGGCCAGTCCGGCTTGTCGTTGGAGAACCTCGAGCCCACCCA TCCGGCGGCCCTGCGGAAGCGCGTCCACTTCTCGCCCGCAGATCCGGCCG TCTTGGTTTGGCCCGCTCTCTTCATCTATCCGGAGCACGGCGAGACGGAC TTTGTCGAGGCATTCGAGGAGAACCAGATCTTCGCCGATCACCTCCAGGC CATGTTCGGGCCCGAAGCACCGTCGGCCCCCTGGGACTTGGACCACAAGT ACGTGCCTGAGCGGCTGGCTCTTCAGTTCGAGGACGTGACCGCCCAGAAA CTGGTTCCCGTCGACGCCCAAGTCACTCTCAAGTCGGTTCTGAGCGATCC TCGCTATCGCTTGGTGGGCGGCACCCCGGGGATCATTGTCACTGTCCGCG GGAGCAAGTTTGAGTCCGATTTCCAGAGCAAATACAAATAG
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Synonyms
The feature 'tetratricopeptide repeat protein 4' has the following synonyms
Synonym
Tk10704
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