succinate dehydrogenase iron-sulfur subunit, snap_masked-scaffold1812_size27308-processed-gene-0.0 (gene) Tigriopus kingsejongensis

Overview
Namesuccinate dehydrogenase iron-sulfur subunit
Unique Namesnap_masked-scaffold1812_size27308-processed-gene-0.0
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of succinate dehydrogenase iron-sulfur subunit vs. L. salmonis genes
Match: EMLSAG00000005338 (supercontig:LSalAtl2s:LSalAtl2s287:186065:187108:-1 gene:EMLSAG00000005338 transcript:EMLSAT00000005338 description:"maker-LSalAtl2s287-augustus-gene-3.10")

HSP 1 Score: 338.576 bits (867), Expect = 4.150e-118
Identity = 163/244 (66.80%), Postives = 192/244 (78.69%), Query Frame = 0 
Query:   11 EGATHLR--KVQ---VYRWNEED-GKNPSLDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVQGD-VKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWL----ETKTNRPAKEWKQSVEDREKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMM 243
            EG T LR  KV+   +YRWN ++ G+ P +  Y V++  CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSC+MNI G+NTLACI  +D      +KIYPLPHM V+KDL+PD+ +FY Q+ SI PWL    E+ T+    +  QSVEDR KLDGLYEC++CACCSTSCPSYWWNGDRYLGPA L+ AYRW+IDSRD AT ER+D+L DPF +YRCHTIMNC KTCPKGLNP KAIA IK ++
Sbjct:   36 EGVTGLRTDKVKTFAIYRWNPDNPGEKPKVQEYKVNLSDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCSMNIGGVNTLACITKIDPNPAKAIKIYPLPHMYVVKDLVPDMNNFYEQYRSIQPWLQREDESSTSEGNLQILQSVEDRAKLDGLYECILCACCSTSCPSYWWNGDRYLGPAVLMQAYRWMIDSRDSATHERMDKLRDPFSVYRCHTIMNCTKTCPKGLNPGKAIAEIKKLL 279
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BLAST of succinate dehydrogenase iron-sulfur subunit vs. SwissProt
Match: gi|2494620|sp|Q59662.1|SDHB_PARDE (RecName: Full=Succinate dehydrogenase iron-sulfur subunit)

HSP 1 Score: 448.358 bits (1152), Expect = 1.230e-160
Identity = 206/248 (83.06%), Postives = 227/248 (91.53%), Query Frame = 0 
Query:    1 MVTGKTWPKPEGATHLRKVQVYRWNEEDGKNPSLDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVQGDVKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSVEDREKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMVERVV 248
            M  GKTWPKPEGAT++R+  +YRW+ + G+NP +DTYFVDMD CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDG N LACIYGMDE++GDV IYPLPHMPV+KDL+PDLTHFYAQHAS+ P+L T+T  P KEW+QS+EDR+KLDGLYECVMCA CST+CPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLD LEDPFKLYRCHTIMNC  TCPKGLNPAKAIASIK MMV+R+V
Sbjct:   12 MRVGKTWPKPEGATNVRRFNIYRWDPDTGENPRIDTYFVDMDKCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGGNHLACIYGMDEIKGDVNIYPLPHMPVVKDLVPDLTHFYAQHASVQPYLITETPTPDKEWRQSIEDRKKLDGLYECVMCASCSTACPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDSLEDPFKLYRCHTIMNCTNTCPKGLNPAKAIASIKHMMVDRIV 259
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BLAST of succinate dehydrogenase iron-sulfur subunit vs. SwissProt
Match: gi|123388071|sp|Q1RGP3.1|SDHB_RICBR (RecName: Full=Succinate dehydrogenase iron-sulfur subunit)

HSP 1 Score: 370.548 bits (950), Expect = 7.460e-130
Identity = 168/244 (68.85%), Postives = 206/244 (84.43%), Query Frame = 0 
Query:    4 GKTWPKPEGATHLRKVQVYRWNEEDGKNPSLDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVQGDVKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKTNRPAK-EWKQSVEDREKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMVER 246
            GK        ++LRK+++YR++ +  +NP++D++ +D+   GPMVLDALIKIKNEID T+TFRRSCREGICGSCAMNIDG NTLACI  ++E+ GD+KIYPLPHM V+KDL+PD++HFYAQ+ SI PWL+T +  P+  E  QS++DREKLDGLYEC++CACCSTSCPSYWWNGD+YLGPA LL AYRWI DSRD+ TGERL+ LEDPFKLYRCHTIMNC KTCPKGLNPAKAI+ IKG++ ER
Sbjct:   15 GKEHKAKGDVSNLRKIKIYRYDPDLDENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTVTFRRSCREGICGSCAMNIDGTNTLACIKPIEEISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIEPWLKTDSPAPSNAERLQSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQAYRWIADSRDDHTGERLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAISEIKGLIAER 258
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BLAST of succinate dehydrogenase iron-sulfur subunit vs. SwissProt
Match: gi|20137875|sp|Q92JJ8.1|SDHB_RICCN (RecName: Full=Succinate dehydrogenase iron-sulfur subunit)

HSP 1 Score: 365.54 bits (937), Expect = 5.831e-128
Identity = 166/244 (68.03%), Postives = 203/244 (83.20%), Query Frame = 0 
Query:    4 GKTWPKPEGATHLRKVQVYRWNEEDGKNPSLDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVQGDVKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKTNRPAK-EWKQSVEDREKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMVER 246
            G+   + E     RK+++YR++ +  KNP++D++ +D+   GPM+LDALIKIKNEID TLTFRRSCREGICGSCAMNIDG NTLACI  ++++ GD+KIYPLPHM V+KDL+PD++HFYAQ+ SI PWL+T +  P+  E  QS++DREKLDGLYEC++CACCSTSCPSYWWNGD+YLGPA LL AYRWI DSRD+ TGERL+ LEDPFKLYRCHTIMNC KTCPKGLNPAKAI  IK ++ ER
Sbjct:   15 GREHKEQEEMLKPRKIKIYRYDPDLDKNPTIDSFEIDLSKTGPMILDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIEPWLKTDSPTPSNSERLQSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQAYRWIADSRDDNTGERLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGKIKSLIAER 258
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BLAST of succinate dehydrogenase iron-sulfur subunit vs. SwissProt
Match: gi|81826336|sp|Q68XS0.1|SDHB_RICTY (RecName: Full=Succinate dehydrogenase iron-sulfur subunit)

HSP 1 Score: 362.073 bits (928), Expect = 1.796e-126
Identity = 163/231 (70.56%), Postives = 194/231 (83.98%), Query Frame = 0 
Query:   17 RKVQVYRWNEEDGKNPSLDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVQGDVKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKTNRPAK-EWKQSVEDREKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMVER 246
            RKVQVYR++ +  KNP++D++ +D+   GPMVLDALIKIKNEID TLTFRRSCREGICGSCAMNIDG NTLACI  ++++ GD+KIYPLPHM V+KDL+PD++HFY Q+ SI PWL+     P+  E  QS++DREKLDGLYEC++CACCSTSCPSYWWN D+YLGPA LL AYRWI DSRD+ TG RL+ LEDPFKLYRCHTIMNC KTCPKGLNPAKAI  +K ++ ER
Sbjct:   28 RKVQVYRYDPDLNKNPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYTQYESIEPWLKNDNPAPSNSERLQSIQDREKLDGLYECILCACCSTSCPSYWWNSDKYLGPAILLQAYRWIADSRDDNTGARLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGRVKSLIAER 258
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BLAST of succinate dehydrogenase iron-sulfur subunit vs. SwissProt
Match: gi|75537005|sp|Q4UN71.1|SDHB_RICFE (RecName: Full=Succinate dehydrogenase iron-sulfur subunit)

HSP 1 Score: 361.688 bits (927), Expect = 2.414e-126
Identity = 166/244 (68.03%), Postives = 202/244 (82.79%), Query Frame = 0 
Query:    4 GKTWPKPEGATHLRKVQVYRWNEEDGKNPSLDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVQGDVKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKTNRPAK-EWKQSVEDREKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMVER 246
            GK   + E     RKV++YR++ +  +NP++D++ +D+   GPMVLDALIKIKNEID TLTFRRSCREGICGSC+MNIDG NTLACI  ++E+ GD+KIYPLPHM V+KDL+PD++HFYAQ+ SI PWL+T +  P+  E  QS++ REKLDGLYEC++CACCSTSCPSYWWNGD+YLGPA LL AYRWI DSRD+ TGERL++LEDP KLYRCHTIMNC KTCPKGLNPAKAI  IK ++ ER
Sbjct:   15 GKEHKEQEEMLKPRKVKIYRYDPDLDENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCSMNIDGTNTLACIKPIEEISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIEPWLKTDSPTPSNSERLQSIKGREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQAYRWIADSRDDHTGERLEDLEDPSKLYRCHTIMNCTKTCPKGLNPAKAIGKIKSLIAER 258
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BLAST of succinate dehydrogenase iron-sulfur subunit vs. SwissProt
Match: gi|6919864|sp|Q9ZEA1.1|SDHB_RICPR (RecName: Full=Succinate dehydrogenase iron-sulfur subunit)

HSP 1 Score: 360.918 bits (925), Expect = 3.951e-126
Identity = 163/231 (70.56%), Postives = 197/231 (85.28%), Query Frame = 0 
Query:   17 RKVQVYRWNEEDGKNPSLDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVQGDVKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKTNRPAK-EWKQSVEDREKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMVER 246
            RKV+VYR++ +  +NP++D++ +D+   GPMVLDALIKIKNEID TLTFRRSCREGICGSCAMNIDG NTLACI  ++++ GD+KIYPLPHM V+KDL+PD++HFYAQ+ SI PWL+  +  P+  E  QS++DREKLDGLYEC++CACCSTSCPSYWWNGD+YLGPA LL AYRWI DSRD+ TG RL+ LEDPFKLYRCHTIMNC KTCPKGLNPAKAI  +K ++ ER
Sbjct:   28 RKVKVYRYDPDLDENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIEPWLKNDSPAPSNSERLQSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQAYRWIADSRDDNTGARLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGRVKNLIAER 258
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BLAST of succinate dehydrogenase iron-sulfur subunit vs. SwissProt
Match: gi|1706426|sp|P80480.1|SDHB_RECAM (RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip)

HSP 1 Score: 349.362 bits (895), Expect = 7.103e-122
Identity = 159/222 (71.62%), Postives = 185/222 (83.33%), Query Frame = 0 
Query:   19 VQVYRWNEEDGKNPSLDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVQGDVKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSVEDREKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIK 240
             +VYRWN +  + P + TY VD++SCGPMVLDALIKIKNE D TLTFRRSCREG+CGSCAMNIDG NTLACI  +D  + ++KIYPLPHM +IKDL+PDL++FYAQ+ SI PW++T   +  KE+ QS  DREKLDGLYECV+CACCSTSCPSYWWN D+YLGPA LL AYRWI+DSRD+ T ERL  LEDPFKLYRCHTI+NC KTCPK LNPA+AIA IK
Sbjct:   11 FKVYRWNPDKKEKPHISTYSVDLNSCGPMVLDALIKIKNEQDSTLTFRRSCREGVCGSCAMNIDGTNTLACIKSIDTNKKEMKIYPLPHMHIIKDLVPDLSNFYAQYKSIEPWMKTTEKKLDKEFYQSRNDREKLDGLYECVLCACCSTSCPSYWWNSDKYLGPAVLLQAYRWIVDSRDQGTRERLQYLEDPFKLYRCHTILNCTKTCPKHLNPAQAIAKIK 232
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BLAST of succinate dehydrogenase iron-sulfur subunit vs. SwissProt
Match: gi|205371749|sp|P21913.2|SDHB_RAT (RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor)

HSP 1 Score: 341.273 bits (874), Expect = 5.773e-118
Identity = 160/234 (68.38%), Postives = 190/234 (81.20%), Query Frame = 0 
Query:   15 HLRKVQVYRWN-EEDGKNPSLDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVQGDV-KIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETK--TNRPAKEWKQSVEDREKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMV 244
             ++   +YRW+ ++ G  P + TY VD++ CGPMVLDALIKIKNEID TLTFRRSCREGICGSCAMNI+G NTLAC   +D   G V KIYPLPHM VIKDL+PDL++FYAQ+ SI P+L+ K  +    +++ QS+EDREKLDGLYEC++CACCSTSCPSYWWNGD+YLGPA L+ AYRW+IDSRDE T ERL +L+DPF LYRCHTIMNC +TCPKGLNP KAIA IK MM 
Sbjct:   40 RIKTFAIYRWDPDKAGDKPRMQTYKVDLNKCGPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDEFTEERLAKLQDPFSLYRCHTIMNCTQTCPKGLNPGKAIAEIKKMMA 273
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BLAST of succinate dehydrogenase iron-sulfur subunit vs. SwissProt
Match: gi|729335|sp|P21914.2|SDHB_DROME (RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor)

HSP 1 Score: 340.117 bits (871), Expect = 2.640e-117
Identity = 154/245 (62.86%), Postives = 191/245 (77.96%), Query Frame = 0 
Query:    5 KTWPKPEGATHLRKVQVYRWNEED-GKNPSLDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMD-EVQGDVKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWK----QSVEDREKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMM 243
            +  PK      ++K ++YRWN ++ G+ P + TY VD+  CGPMVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI G NTLACI  +D      +K+YPLPHM V++DL+PD+ +FY Q+ +I PWL+ K     K+ K    QSVEDR KLDGLYEC++CACCSTSCPSYWWN ++YLGPA L+ AYRWIIDSRDE + ERL++L+DPF +YRCHTIMNC +TCPKGLNP +AIA IK ++
Sbjct:   35 QAQPKEAQEPQIKKFEIYRWNPDNAGEKPYMQTYEVDLRECGPMVLDALIKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWLQRKNEAGEKKGKAQYLQSVEDRSKLDGLYECILCACCSTSCPSYWWNAEKYLGPAVLMQAYRWIIDSRDENSAERLNKLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLL 279
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BLAST of succinate dehydrogenase iron-sulfur subunit vs. SwissProt
Match: gi|123916423|sp|Q3B8J8.1|SDHB_XENLA (RecName: Full=Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; AltName: Full=Iron-sulfur subunit of complex II; Short=Ip; Flags: Precursor)

HSP 1 Score: 339.347 bits (869), Expect = 3.181e-117
Identity = 159/241 (65.98%), Postives = 195/241 (80.91%), Query Frame = 0 
Query:   15 HLRKVQVYRWN-EEDGKNPSLDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVQGDV-KIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETK--TNRPAKEWKQSVEDREKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMV---ERVV 248
             ++K  +YRW+ ++ G  P + TY VD+++CGPMVLDALIKIKNE+DPTLTFRRSCREGICGSCAMNI+G NTLAC   +D     V KIYPLPHM V+KDL+PDL++FYAQ+ SI P+L+ K  + +  +++ QS+EDR+KLDGLYEC++CACCSTSCPSYWWN D+YLGPA L+ AYRW+IDSRD+ T ERL +L+DPF LYRCHTIMNC +TCPKGLNP KAIA IK MM    ER V
Sbjct:   40 RIKKFAIYRWDPDKPGDKPRMQTYEVDLNTCGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNINGGNTLACTVRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDKSQQGKEQYLQSIEDRDKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWMIDSRDDFTEERLSKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMAMYKERAV 280
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BLAST of succinate dehydrogenase iron-sulfur subunit vs. nr
Match: gi|494389464|ref|WP_007206859.1| (succinate dehydrogenase iron-sulfur subunit [Loktanella vestfoldensis] >gi|84510330|gb|EAQ06786.1| succinate dehydrogenase [Loktanella vestfoldensis SKA53])

HSP 1 Score: 501.13 bits (1289), Expect = 4.381e-179
Identity = 235/248 (94.76%), Postives = 243/248 (97.98%), Query Frame = 0 
Query:    1 MVTGKTWPKPEGATHLRKVQVYRWNEEDGKNPSLDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVQGDVKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSVEDREKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMVERVV 248
            M TGKTWPKP GAT+LRKVQVYRWN EDGKNP LDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDE++GD+KIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETK+N PAKEWKQSV+DR+KLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWI+DSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMVERVV
Sbjct:   12 MTTGKTWPKPAGATNLRKVQVYRWNPEDGKNPQLDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDIKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKSNTPAKEWKQSVDDRKKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIVDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMVERVV 259
[Close]
BLAST of succinate dehydrogenase iron-sulfur subunit vs. nr
Match: gi|1199470713|ref|WP_087209492.1| (succinate dehydrogenase iron-sulfur subunit [Loktanella vestfoldensis] >gi|1198349345|gb|ARU02087.1| succinate dehydrogenase iron-sulfur subunit [Loktanella vestfoldensis])

HSP 1 Score: 499.975 bits (1286), Expect = 1.176e-178
Identity = 233/248 (93.95%), Postives = 244/248 (98.39%), Query Frame = 0 
Query:    1 MVTGKTWPKPEGATHLRKVQVYRWNEEDGKNPSLDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVQGDVKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSVEDREKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMVERVV 248
            M TGKTWPKPEGAT+LRKVQ+YRWN EDGKNP LDTYF+DMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDE++GD++IYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETK+N PAKEWKQSV+DR+KLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWI+DSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMVERVV
Sbjct:   12 MTTGKTWPKPEGATNLRKVQIYRWNPEDGKNPQLDTYFLDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDIRIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKSNTPAKEWKQSVDDRKKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIVDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMVERVV 259
[Close]
BLAST of succinate dehydrogenase iron-sulfur subunit vs. nr
Match: gi|648660580|ref|WP_026352327.1| (succinate dehydrogenase iron-sulfur subunit [Loktanella vestfoldensis])

HSP 1 Score: 498.049 bits (1281), Expect = 7.108e-178
Identity = 231/248 (93.15%), Postives = 243/248 (97.98%), Query Frame = 0 
Query:    1 MVTGKTWPKPEGATHLRKVQVYRWNEEDGKNPSLDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVQGDVKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSVEDREKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMVERVV 248
            M TGKTWPKPEGA +LRKVQ+YRWN EDGKNP LDTYFVDMD+CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDE++GD+KIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETK+N PAKEWKQS++DR+KLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWI+DSRDEATGER+DELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMVERVV
Sbjct:   12 MTTGKTWPKPEGAKNLRKVQIYRWNPEDGKNPQLDTYFVDMDTCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDIKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKSNTPAKEWKQSIDDRKKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIVDSRDEATGERMDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMVERVV 259
[Close]
BLAST of succinate dehydrogenase iron-sulfur subunit vs. nr
Match: gi|1282010387|ref|WP_100369262.1| (succinate dehydrogenase iron-sulfur subunit [Loktanella maricola] >gi|1280208373|gb|PJI85336.1| succinate dehydrogenase subunit B [Loktanella maricola])

HSP 1 Score: 497.278 bits (1279), Expect = 1.244e-177
Identity = 233/248 (93.95%), Postives = 243/248 (97.98%), Query Frame = 0 
Query:    1 MVTGKTWPKPEGATHLRKVQVYRWNEEDGKNPSLDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVQGDVKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSVEDREKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMVERVV 248
            M  GKTWPKPEGAT+LRKVQ+YRWN +DG+NP LDTYF+DMD+CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEV+GDVKIYPLPHMPVIKDLIPDLTHFYAQHAS+MPWLETKTNRPAKEWKQSV+DR+KLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIA IKGMMVERVV
Sbjct:   12 MKVGKTWPKPEGATNLRKVQIYRWNPDDGQNPQLDTYFLDMDTCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVKGDVKIYPLPHMPVIKDLIPDLTHFYAQHASVMPWLETKTNRPAKEWKQSVDDRKKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIAHIKGMMVERVV 259
[Close]
BLAST of succinate dehydrogenase iron-sulfur subunit vs. nr
Match: gi|1222147581|ref|WP_090202963.1| (succinate dehydrogenase iron-sulfur subunit [Loktanella litorea] >gi|1097296750|emb|SFR99091.1| succinate dehydrogenase subunit B [Loktanella litorea])

HSP 1 Score: 496.893 bits (1278), Expect = 1.950e-177
Identity = 233/248 (93.95%), Postives = 242/248 (97.58%), Query Frame = 0 
Query:    1 MVTGKTWPKPEGATHLRKVQVYRWNEEDGKNPSLDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVQGDVKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSVEDREKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMVERVV 248
            M TGKTWPKPEGAT+LRKVQ+YRWN +DGKNP LDTYFVDMD+CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDE++GDVKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQS+EDR+KLDGLYECVMCA CSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLD+LEDPFKLYRCHTIMNCAKTCPKGLNPAKAIA IK MMVERVV
Sbjct:   12 MTTGKTWPKPEGATNLRKVQIYRWNPDDGKNPQLDTYFVDMDTCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSIEDRKKLDGLYECVMCASCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDQLEDPFKLYRCHTIMNCAKTCPKGLNPAKAIAHIKKMMVERVV 259
[Close]
BLAST of succinate dehydrogenase iron-sulfur subunit vs. nr
Match: gi|495508547|ref|WP_008233193.1| (succinate dehydrogenase iron-sulfur subunit [Roseobacter sp. CCS2] >gi|126715399|gb|EBA12264.1| succinate dehydrogenase, iron-sulfur protein [Roseobacter sp. CCS2])

HSP 1 Score: 496.508 bits (1277), Expect = 3.091e-177
Identity = 232/248 (93.55%), Postives = 241/248 (97.18%), Query Frame = 0 
Query:    1 MVTGKTWPKPEGATHLRKVQVYRWNEEDGKNPSLDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVQGDVKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSVEDREKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMVERVV 248
            M  GKTWPKPEGAT+LRKVQVYRWN +DGK P LDTYF+DMD CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDE++GDVKIYPLPHMPVIKDLIPDLTHFYAQHAS+MPWLETKTNRPAKEWKQS++DR+KLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIA IKGMMVERVV
Sbjct:   12 MTVGKTWPKPEGATNLRKVQVYRWNPDDGKTPQLDTYFIDMDDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLPHMPVIKDLIPDLTHFYAQHASVMPWLETKTNRPAKEWKQSIDDRKKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIAHIKGMMVERVV 259
[Close]
BLAST of succinate dehydrogenase iron-sulfur subunit vs. nr
Match: gi|944380652|ref|WP_055686510.1| (succinate dehydrogenase iron-sulfur subunit [Loktanella sp. 5RATIMAR09] >gi|943690109|gb|KQI72366.1| succinate dehydrogenase [Loktanella sp. 5RATIMAR09])

HSP 1 Score: 494.582 bits (1272), Expect = 1.952e-176
Identity = 231/248 (93.15%), Postives = 241/248 (97.18%), Query Frame = 0 
Query:    1 MVTGKTWPKPEGATHLRKVQVYRWNEEDGKNPSLDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVQGDVKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSVEDREKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMVERVV 248
            M  GKTWPKPEGAT+LRKVQVYRWN +DGKNP LDTYF+DMD+CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDE++GDVKIYPLPHMPVIKDLIPDLTHFYAQHAS+MPWLETKTNRPAKEWKQSV+DR+KLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLD+LEDPFKLYRCHTIMNCAKTCPKGLNPA AIA IKGMMVER V
Sbjct:   12 MKVGKTWPKPEGATNLRKVQVYRWNPDDGKNPQLDTYFIDMDNCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLPHMPVIKDLIPDLTHFYAQHASVMPWLETKTNRPAKEWKQSVDDRKKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDQLEDPFKLYRCHTIMNCAKTCPKGLNPAAAIAHIKGMMVERTV 259
[Close]
BLAST of succinate dehydrogenase iron-sulfur subunit vs. nr
Match: gi|800970187|ref|WP_045996852.1| (succinate dehydrogenase iron-sulfur subunit [Loktanella sp. S4079] >gi|798773850|gb|KJZ20833.1| succinate dehydrogenase [Loktanella sp. S4079])

HSP 1 Score: 492.271 bits (1266), Expect = 1.233e-175
Identity = 230/248 (92.74%), Postives = 240/248 (96.77%), Query Frame = 0 
Query:    1 MVTGKTWPKPEGATHLRKVQVYRWNEEDGKNPSLDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVQGDVKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSVEDREKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMVERVV 248
            M  GKTWPKPEGAT+LRKVQ+YRWN +DGKNP LDTYFVDMD+CGPMVLD LIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYG+DE++GDVKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQS+EDR+KLDGLYECVMCA CSTSCPSYWWN DRYLGPAALLHAYRWIIDSRDEATGERLD+LEDPFKLYRCHTIMNCAKTCPKGLNPAKAIA IKGMMVERVV
Sbjct:   12 MTVGKTWPKPEGATNLRKVQIYRWNPDDGKNPQLDTYFVDMDTCGPMVLDVLIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEIKGDVKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSIEDRKKLDGLYECVMCASCSTSCPSYWWNSDRYLGPAALLHAYRWIIDSRDEATGERLDDLEDPFKLYRCHTIMNCAKTCPKGLNPAKAIAHIKGMMVERVV 259
[Close]
BLAST of succinate dehydrogenase iron-sulfur subunit vs. nr
Match: gi|1189754199|ref|WP_085799285.1| (succinate dehydrogenase iron-sulfur subunit [Roseovarius aestuarii] >gi|1188049657|emb|SMC11317.1| Succinate dehydrogenase iron-sulfur subunit [Roseovarius aestuarii])

HSP 1 Score: 492.271 bits (1266), Expect = 1.438e-175
Identity = 228/248 (91.94%), Postives = 240/248 (96.77%), Query Frame = 0 
Query:    1 MVTGKTWPKPEGATHLRKVQVYRWNEEDGKNPSLDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVQGDVKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSVEDREKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMVERVV 248
            M TGKTWPKPEGA+++RK Q+YRWN +DGKNPS+DTYFVDMDSCGPM+LDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDE+QGDVKIYPLPHMPV+KDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQS+EDREKLDGLYECVMCA CSTSCPSYWWNGD+YLGPAALLHAYRWIIDSRDEATGERLD+LEDPFKLYRCHTIMNC KTCPKGLNPAKAIA IK MMVER V
Sbjct:   12 MTTGKTWPKPEGASNVRKFQIYRWNPDDGKNPSVDTYFVDMDSCGPMILDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIQGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSIEDREKLDGLYECVMCASCSTSCPSYWWNGDKYLGPAALLHAYRWIIDSRDEATGERLDDLEDPFKLYRCHTIMNCTKTCPKGLNPAKAIAEIKKMMVERAV 259
[Close]
BLAST of succinate dehydrogenase iron-sulfur subunit vs. nr
Match: gi|1189864076|ref|WP_085868917.1| (succinate dehydrogenase iron-sulfur subunit [Pseudoruegeria aquimaris] >gi|1187997550|emb|SLN46210.1| Succinate dehydrogenase iron-sulfur subunit [Pseudoruegeria aquimaris])

HSP 1 Score: 491.886 bits (1265), Expect = 2.020e-175
Identity = 227/248 (91.53%), Postives = 241/248 (97.18%), Query Frame = 0 
Query:    1 MVTGKTWPKPEGATHLRKVQVYRWNEEDGKNPSLDTYFVDMDSCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEVQGDVKIYPLPHMPVIKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSVEDREKLDGLYECVMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIASIKGMMVERVV 248
            +VTGKTWPKPEGAT+LRK Q+YRWNEEDGKNP +DTYFVDMD+CGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDE++GDVKIYPLPHMPV++DLIPDLTHFYAQHASIMPWLETKTNRPAKEW+QS+EDR+KLDGLYECVMCA CSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPA+AI  IK MMVER +
Sbjct:   12 IVTGKTWPKPEGATNLRKFQIYRWNEEDGKNPRIDTYFVDMDTCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLPHMPVVRDLIPDLTHFYAQHASIMPWLETKTNRPAKEWRQSIEDRKKLDGLYECVMCASCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAEAIGQIKKMMVERAI 259
The following BLAST results are available for this feature:
BLAST of succinate dehydrogenase iron-sulfur subunit vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000053384.150e-11866.80supercontig:LSalAtl2s:LSalAtl2s287:186065:187108:-... [more]
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BLAST of succinate dehydrogenase iron-sulfur subunit vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|2494620|sp|Q59662.1|SDHB_PARDE1.230e-16083.06RecName: Full=Succinate dehydrogenase iron-sulfur ... [more]
gi|123388071|sp|Q1RGP3.1|SDHB_RICBR7.460e-13068.85RecName: Full=Succinate dehydrogenase iron-sulfur ... [more]
gi|20137875|sp|Q92JJ8.1|SDHB_RICCN5.831e-12868.03RecName: Full=Succinate dehydrogenase iron-sulfur ... [more]
gi|81826336|sp|Q68XS0.1|SDHB_RICTY1.796e-12670.56RecName: Full=Succinate dehydrogenase iron-sulfur ... [more]
gi|75537005|sp|Q4UN71.1|SDHB_RICFE2.414e-12668.03RecName: Full=Succinate dehydrogenase iron-sulfur ... [more]
gi|6919864|sp|Q9ZEA1.1|SDHB_RICPR3.951e-12670.56RecName: Full=Succinate dehydrogenase iron-sulfur ... [more]
gi|1706426|sp|P80480.1|SDHB_RECAM7.103e-12271.62RecName: Full=Succinate dehydrogenase [ubiquinone]... [more]
gi|205371749|sp|P21913.2|SDHB_RAT5.773e-11868.38RecName: Full=Succinate dehydrogenase [ubiquinone]... [more]
gi|729335|sp|P21914.2|SDHB_DROME2.640e-11762.86RecName: Full=Succinate dehydrogenase [ubiquinone]... [more]
gi|123916423|sp|Q3B8J8.1|SDHB_XENLA3.181e-11765.98RecName: Full=Succinate dehydrogenase [ubiquinone]... [more]

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BLAST of succinate dehydrogenase iron-sulfur subunit vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|494389464|ref|WP_007206859.1|4.381e-17994.76succinate dehydrogenase iron-sulfur subunit [Lokta... [more]
gi|1199470713|ref|WP_087209492.1|1.176e-17893.95succinate dehydrogenase iron-sulfur subunit [Lokta... [more]
gi|648660580|ref|WP_026352327.1|7.108e-17893.15succinate dehydrogenase iron-sulfur subunit [Lokta... [more]
gi|1282010387|ref|WP_100369262.1|1.244e-17793.95succinate dehydrogenase iron-sulfur subunit [Lokta... [more]
gi|1222147581|ref|WP_090202963.1|1.950e-17793.95succinate dehydrogenase iron-sulfur subunit [Lokta... [more]
gi|495508547|ref|WP_008233193.1|3.091e-17793.55succinate dehydrogenase iron-sulfur subunit [Roseo... [more]
gi|944380652|ref|WP_055686510.1|1.952e-17693.15succinate dehydrogenase iron-sulfur subunit [Lokta... [more]
gi|800970187|ref|WP_045996852.1|1.233e-17592.74succinate dehydrogenase iron-sulfur subunit [Lokta... [more]
gi|1189754199|ref|WP_085799285.1|1.438e-17591.94succinate dehydrogenase iron-sulfur subunit [Roseo... [more]
gi|1189864076|ref|WP_085868917.1|2.020e-17591.53succinate dehydrogenase iron-sulfur subunit [Pseud... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1812_size27308supercontigscaffold1812_size27308:6212..6958 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteP:tricarboxylic acid cycle
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold1812_size27308-processed-gene-0.0-mRNA-1snap_masked-scaffold1812_size27308-processed-gene-0.0-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1812_size27308:6212..6958+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold1812_size27308-processed-gene-0.0 ID=snap_masked-scaffold1812_size27308-processed-gene-0.0|Name=succinate dehydrogenase iron-sulfur subunit|organism=Tigriopus kingsejongensis|type=gene|length=747bp|location=Sequence derived from alignment at scaffold1812_size27308:6212..6958+ (Tigriopus kingsejongensis)
ATGGTGACGGGTAAAACCTGGCCAAAGCCGGAAGGTGCGACGCATTTGCG
CAAGGTTCAGGTCTACCGCTGGAACGAAGAGGACGGCAAAAACCCGTCTT
TGGATACATATTTTGTCGATATGGATAGCTGCGGACCGATGGTTCTGGAC
GCGCTGATCAAAATCAAGAACGAGATTGACCCGACGCTGACGTTCCGCCG
CTCTTGTCGCGAGGGTATTTGCGGATCTTGTGCGATGAATATCGACGGGA
TCAACACATTGGCCTGTATTTACGGTATGGACGAAGTTCAGGGCGACGTC
AAAATCTACCCGCTGCCGCATATGCCGGTGATCAAGGATTTGATCCCGGA
CCTTACACATTTCTATGCGCAACACGCGTCGATCATGCCGTGGCTTGAAA
CAAAAACAAACCGTCCGGCCAAAGAATGGAAGCAATCTGTTGAAGATCGT
GAAAAGCTGGATGGCCTTTACGAATGTGTGATGTGTGCTTGTTGTTCAAC
ATCCTGCCCGTCGTATTGGTGGAATGGTGACAGGTATCTTGGGCCAGCGG
CCTTGCTGCACGCCTACCGCTGGATCATCGACAGCCGCGATGAAGCCACG
GGGGAACGTCTTGACGAATTGGAAGATCCGTTCAAGCTCTACCGGTGCCA
CACGATCATGAACTGCGCAAAAACATGCCCGAAAGGCCTGAACCCCGCCA
AAGCGATTGCCAGCATCAAAGGCATGATGGTCGAACGGGTCGTTTAA
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Synonyms
The feature 'succinate dehydrogenase iron-sulfur subunit' has the following synonyms
Synonym
Tk06240
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