basic helix-loop-helix transcription factor amos, snap_masked-scaffold22_size673200-processed-gene-5.8 (gene) Tigriopus kingsejongensis

Overview


Name	basic helix-loop-helix transcription factor amos
Unique Name	snap_masked-scaffold22_size673200-processed-gene-5.8
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of basic helix-loop-helix transcription factor amos vs. L. salmonis genes
Match: EMLSAG00000000040 (supercontig:LSalAtl2s:LSalAtl2s1006:57802:58891:-1 gene:EMLSAG00000000040 transcript:EMLSAT00000000040 description:"snap_masked-LSalAtl2s1006-processed-gene-0.21")

HSP 1 Score: 110.538 bits (275), Expect = 2.104e-30
Identity = 61/89 (68.54%), Postives = 77/89 (86.52%), Query Frame = 0

Query:  116 PGVRKGRGGRKKNTHPPAPQILRQRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLIDRTNQDNNN 204
            P  RK RGGRKK+T PP+P+ LR+RR  ANARER+RMNGLN AFERLR+VIP+LGSD+KLSK+ETLQMAQTYIGAL+ L+ + + ++N+
Sbjct:   87 PNARKSRGGRKKSTRPPSPEXLRRRRTXANARERKRMNGLNHAFERLRDVIPDLGSDNKLSKFETLQMAQTYIGALSGLLKQADDNDND 175

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BLAST of basic helix-loop-helix transcription factor amos vs. L. salmonis genes
Match: EMLSAG00000008600 (supercontig:LSalAtl2s:LSalAtl2s52:789170:789598:-1 gene:EMLSAG00000008600 transcript:EMLSAT00000008600 description:"augustus_masked-LSalAtl2s52-processed-gene-7.2")

HSP 1 Score: 89.7373 bits (221), Expect = 4.654e-23
Identity = 40/61 (65.57%), Postives = 51/61 (83.61%), Query Frame = 0

Query:  136 ILRQRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLID 196
            IL++RR+A NARERRRM+ LN  F+RLR V+P LG + +LSKYETLQMAQ+YIGAL  L++
Sbjct:   80 ILKKRRLAXNARERRRMDMLNKGFDRLRGVLPGLGENRQLSKYETLQMAQSYIGALTELLN 140

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BLAST of basic helix-loop-helix transcription factor amos vs. L. salmonis genes
Match: EMLSAG00000001846 (supercontig:LSalAtl2s:LSalAtl2s131:305784:306913:1 gene:EMLSAG00000001846 transcript:EMLSAT00000001846 description:"maker-LSalAtl2s131-augustus-gene-3.10")

HSP 1 Score: 72.7886 bits (177), Expect = 5.820e-16
Identity = 34/69 (49.28%), Postives = 49/69 (71.01%), Query Frame = 0

Query:  132 PAPQIL-----RQRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLI 195
            P P++L     +++RV AN RER+RMN LN AF  LR+V+P  G+D +LSK+ET+Q+A+ YI  L  L+
Sbjct:  163 PRPKVLTKEEKKKKRVDANDRERQRMNQLNTAFNNLRDVLPRHGNDRELSKFETIQIAKNYIQTLHQLV 231

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BLAST of basic helix-loop-helix transcription factor amos vs. L. salmonis genes
Match: EMLSAG00000012504 (supercontig:LSalAtl2s:LSalAtl2s921:126459:127335:-1 gene:EMLSAG00000012504 transcript:EMLSAT00000012504 description:"maker-LSalAtl2s921-augustus-gene-1.57")

HSP 1 Score: 70.4774 bits (171), Expect = 5.803e-15
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 0

Query:  124 GRKKNTHPPAPQILRQRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLI 195
            GRKK     A +    RR+ +N RER RM+GLN+AF+ LREVIP++    KLSK ETL +A+ YI AL N+I
Sbjct:   67 GRKKRPLLSAKE-KNVRRIESNERERLRMHGLNEAFQGLREVIPHVHHSRKLSKIETLSLAKNYIMALTNVI 137

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BLAST of basic helix-loop-helix transcription factor amos vs. L. salmonis genes
Match: EMLSAG00000009090 (supercontig:LSalAtl2s:LSalAtl2s571:239495:250164:1 gene:EMLSAG00000009090 transcript:EMLSAT00000009090 description:"maker-LSalAtl2s571-augustus-gene-1.19")

HSP 1 Score: 61.2326 bits (147), Expect = 7.740e-12
Identity = 28/56 (50.00%), Postives = 40/56 (71.43%), Query Frame = 0

Query:  140 RRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLI 195
            +R AAN RER+RM  +NDAFE LR+ IP L  + KLSK +TL++   Y+  LA+++
Sbjct:   89 QRYAANLRERKRMQSINDAFEGLRQHIPTLPYEKKLSKVDTLRLTIGYVNFLADIV 144

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BLAST of basic helix-loop-helix transcription factor amos vs. L. salmonis genes
Match: EMLSAG00000006769 (supercontig:LSalAtl2s:LSalAtl2s379:476161:478870:-1 gene:EMLSAG00000006769 transcript:EMLSAT00000006769 description:"maker-LSalAtl2s379-augustus-gene-4.10")

HSP 1 Score: 61.2326 bits (147), Expect = 1.292e-11
Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 0

Query:  143 AANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLIDRTNQDN 202
             +N +ERRR   +N+AF  LR+ IPN+  D KLSK +TL++A +YI  L  L++  N DN
Sbjct:  139 GSNKKERRRTQSINNAFASLRDCIPNVPCDTKLSKIKTLRLATSYIDYLITLLNSENSDN 198

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BLAST of basic helix-loop-helix transcription factor amos vs. L. salmonis genes
Match: EMLSAG00000005912 (supercontig:LSalAtl2s:LSalAtl2s31:165920:167001:-1 gene:EMLSAG00000005912 transcript:EMLSAT00000005912 description:"maker-LSalAtl2s31-augustus-gene-1.5")

HSP 1 Score: 57.7658 bits (138), Expect = 1.384e-10
Identity = 29/64 (45.31%), Postives = 42/64 (65.62%), Query Frame = 0

Query:  134 PQILRQRRVAANARERRRMNGLNDAFERLREVIP--NLGSDHKLSKYETLQMAQTYIGALANLI 195
            P + + RR  ANARER RM  +NDAFE L++ IP   +  + K +K  TL++A  YI AL++L+
Sbjct:   52 PPLSKYRRKTANARERDRMREINDAFEALQKAIPGMEVKKEEKCTKLNTLKLAMNYIKALSDLL 115

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BLAST of basic helix-loop-helix transcription factor amos vs. L. salmonis genes
Match: EMLSAG00000008986 (supercontig:LSalAtl2s:LSalAtl2s562:113751:114473:-1 gene:EMLSAG00000008986 transcript:EMLSAT00000008986 description:"augustus_masked-LSalAtl2s562-processed-gene-1.0")

HSP 1 Score: 57.7658 bits (138), Expect = 2.125e-10
Identity = 28/63 (44.44%), Postives = 38/63 (60.32%), Query Frame = 0

Query:  133 APQILRQRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLI 195
              ++ + RR  AN RER RM+ LN A E+LR V+P    + KL+K ETL+ A  YI +L   I
Sbjct:   30 VKEMKKIRRAKANDRERHRMHMLNTALEKLRLVLPAFPDETKLTKIETLRFANNYIWSLKESI 92

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BLAST of basic helix-loop-helix transcription factor amos vs. L. salmonis genes
Match: EMLSAG00000002307 (supercontig:LSalAtl2s:LSalAtl2s1437:29415:30176:1 gene:EMLSAG00000002307 transcript:EMLSAT00000002307 description:"augustus_masked-LSalAtl2s1437-processed-gene-0.0")

HSP 1 Score: 57.7658 bits (138), Expect = 2.214e-10
Identity = 54/162 (33.33%), Postives = 74/162 (45.68%), Query Frame = 0

Query:   61 PESQPPPPVGPYGGLNGFETDLSYGPGD-------PSVFHSDPLSISSYESTPPLTPRPGGTPGVRKG-----------RGGRKKNTHPPAPQILRQRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLIDRTNQDNNN 204
            P S P P V P    +    DL YG  D        S+ H D    S   S+ P+T      PG RK            + GR+K   P +   L  +R  AN RER+R   LN AF+ LR++IP    D KLSK +TL++A  YI  L  ++  + +  +N
Sbjct:   52 PLSSPLPDVIPLLDYSS-PMDLVYGHEDYDRLLGGASLHHEDDCIESHSSSSSPITLHHPLKPGRRKRISCTDNNNVNPKKGRRK---PISHDELLMQRNXANVRERQRTQSLNLAFQNLRQIIPTRPCD-KLSKIQTLKLASCYINFLWQILKESVELEDN 208

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BLAST of basic helix-loop-helix transcription factor amos vs. L. salmonis genes
Match: EMLSAG00000009706 (supercontig:LSalAtl2s:LSalAtl2s626:223487:231342:1 gene:EMLSAG00000009706 transcript:EMLSAT00000009706 description:"snap_masked-LSalAtl2s626-processed-gene-2.7")

HSP 1 Score: 53.1434 bits (126), Expect = 6.750e-9
Identity = 26/59 (44.07%), Postives = 38/59 (64.41%), Query Frame = 0

Query:  139 QRRVAANARERRRMNGLNDAFERLREVI--PNLGSDHKLSKYETLQMAQTYIGALANLI 195
            QRRV AN RER+R++ + +AF+RL+  I  PN     KLSK   +++A  YI  L+ +I
Sbjct:  142 QRRVEANTRERQRVHTITNAFDRLQSAIPSPNHSKQSKLSKLSVIKIATAYIMVLSRII 200

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BLAST of basic helix-loop-helix transcription factor amos vs. SwissProt
Match: gi|20137578|sp|Q9Y0A7.2|AMOS_DROME (RecName: Full=Basic helix-loop-helix transcription factor amos; AltName: Full=Absent MD neurons and olfactory sensilla protein; Short=Amos protein; AltName: Full=Reduced olfactory organs protein; AltName: Full=Rough eye protein)

HSP 1 Score: 99.3673 bits (246), Expect = 1.177e-24
Identity = 43/63 (68.25%), Postives = 55/63 (87.30%), Query Frame = 0

Query:  135 QILRQRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLIDR 197
            ++L++RR+AANARERRRMN LNDAF++LR+V+P+LG D +LSKYETLQMAQ YIG L  L+ R
Sbjct:  134 EVLKKRRLAANARERRRMNSLNDAFDKLRDVVPSLGHDRRLSKYETLQMAQAYIGDLVTLLSR 196

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BLAST of basic helix-loop-helix transcription factor amos vs. SwissProt
Match: gi|82190148|sp|O57598.2|ATOH7_CHICK (RecName: Full=Protein atonal homolog 7; AltName: Full=Helix-loop-helix protein cATH-5; Short=cATH5; AltName: Full=Protein atonal homolog 5)

HSP 1 Score: 92.4337 bits (228), Expect = 1.676e-22
Identity = 45/83 (54.22%), Postives = 56/83 (67.47%), Query Frame = 0

Query:  139 QRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLI---DRTNQDNNNGGGSCAVFHPGPSH 218
            +RR+AANARERRRM GLN AF+RLR+V+P  G D KLSKYETLQMA +YI AL  ++   +R + +       C  FHP   H
Sbjct:   39 KRRLAANARERRRMQGLNTAFDRLRKVVPQWGQDKKLSKYETLQMALSYIMALTRILAEAERYSTEREWINLHCEHFHPESYH 121

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BLAST of basic helix-loop-helix transcription factor amos vs. SwissProt
Match: gi|44889049|sp|Q10574.2|LIN32_CAEEL (RecName: Full=Protein lin-32; AltName: Full=Abnormal cell lineage protein 32)

HSP 1 Score: 91.6633 bits (226), Expect = 2.380e-22
Identity = 44/85 (51.76%), Postives = 60/85 (70.59%), Query Frame = 0

Query:  121 GRGGRKK--NTHPPAPQILRQRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLIDRTNQDNN 203
            G+  +KK      P+PQ+LR RR AAN RERRRMN LN A++ LREV+P + S  KLSK+ETLQMAQ YI  L+ ++ + +++ N
Sbjct:   52 GKDDKKKCRRYKTPSPQLLRMRRSAANERERRRMNTLNVAYDELREVLPEIDSGKKLSKFETLQMAQKYIECLSQILKQDSKNEN 136

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BLAST of basic helix-loop-helix transcription factor amos vs. SwissProt
Match: gi|13124679|sp|P48987.2|ATO_DROME (RecName: Full=Protein atonal)

HSP 1 Score: 95.5153 bits (236), Expect = 2.640e-22
Identity = 44/75 (58.67%), Postives = 57/75 (76.00%), Query Frame = 0

Query:  121 GRGGRKKNTHPPAPQILRQRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLI 195
            G  G+K+      P + R+RR+AANARERRRM  LN AF+RLR+ +P LG+D +LSK+ETLQMAQTYI AL +L+
Sbjct:  237 GGSGKKRRGKQITPVVKRKRRLAANARERRRMQNLNQAFDRLRQYLPCLGNDRQLSKHETLQMAQTYISALGDLL 311

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BLAST of basic helix-loop-helix transcription factor amos vs. SwissProt
Match: gi|1346597|sp|P48985.1|ATOH1_MOUSE (RecName: Full=Protein atonal homolog 1; AltName: Full=Helix-loop-helix protein mATH-1; Short=mATH1)

HSP 1 Score: 90.5077 bits (223), Expect = 3.239e-20
Identity = 42/64 (65.62%), Postives = 52/64 (81.25%), Query Frame = 0

Query:  136 ILRQRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLIDRTN 199
            + +QRR+AANARERRRM+GLN AF++LR VIP+  +D KLSKYETLQMAQ YI AL+ L+   N
Sbjct:  153 VQKQRRLAANARERRRMHGLNHAFDQLRNVIPSFNNDKKLSKYETLQMAQIYINALSELLQTPN 216

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BLAST of basic helix-loop-helix transcription factor amos vs. SwissProt
Match: gi|82189350|sp|O13126.1|ATO7B_XENLA (RecName: Full=Protein atonal homolog 7-B; AltName: Full=Helix-loop-helix protein xATH-5-B; AltName: Full=Protein atonal homolog 5-B; Short=xAth5-B)

HSP 1 Score: 85.8853 bits (211), Expect = 3.593e-20
Identity = 40/75 (53.33%), Postives = 51/75 (68.00%), Query Frame = 0

Query:  139 QRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLIDRTNQDNNNGGGSCAVFH 213
            +RR+AANARERRRM GLN AF+ LR+V+P  G D KLSKYETLQMA +YI AL+ ++    + +    G     H
Sbjct:   33 KRRLAANARERRRMQGLNTAFDSLRKVVPQWGEDKKLSKYETLQMALSYIMALSRILTEAERYSRTDPGEWTKMH 107

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BLAST of basic helix-loop-helix transcription factor amos vs. SwissProt
Match: gi|61211736|sp|Q5IS79.1|ATOH1_PANTR (RecName: Full=Protein atonal homolog 1)

HSP 1 Score: 90.1225 bits (222), Expect = 4.042e-20
Identity = 41/60 (68.33%), Postives = 51/60 (85.00%), Query Frame = 0

Query:  136 ILRQRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLI 195
            + +QRR+AANARERRRM+GLN AF++LR VIP+  +D KLSKYETLQMAQ YI AL+ L+
Sbjct:  158 VQKQRRLAANARERRRMHGLNHAFDQLRNVIPSFNNDKKLSKYETLQMAQIYINALSELL 217

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BLAST of basic helix-loop-helix transcription factor amos vs. SwissProt
Match: gi|3913115|sp|Q92858.1|ATOH1_HUMAN (RecName: Full=Protein atonal homolog 1; AltName: Full=Class A basic helix-loop-helix protein 14; Short=bHLHa14; AltName: Full=Helix-loop-helix protein hATH-1; Short=hATH1)

HSP 1 Score: 90.1225 bits (222), Expect = 4.294e-20
Identity = 41/60 (68.33%), Postives = 51/60 (85.00%), Query Frame = 0

Query:  136 ILRQRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLI 195
            + +QRR+AANARERRRM+GLN AF++LR VIP+  +D KLSKYETLQMAQ YI AL+ L+
Sbjct:  156 VQKQRRLAANARERRRMHGLNHAFDQLRNVIPSFNNDKKLSKYETLQMAQIYINALSELL 215

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BLAST of basic helix-loop-helix transcription factor amos vs. SwissProt
Match: gi|82211814|sp|Q8AW52.1|ATOH7_DANRE (RecName: Full=Protein atonal homolog 7; AltName: Full=Helix-loop-helix protein zATH-5; Short=zATH5; AltName: Full=Protein atonal homolog 5; AltName: Full=Protein lakritz)

HSP 1 Score: 84.7297 bits (208), Expect = 9.555e-20
Identity = 38/57 (66.67%), Postives = 47/57 (82.46%), Query Frame = 0

Query:  139 QRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLI 195
            +RR+AANARER+RM GLN AF+RLR+V+P  G D KLSKYETLQMA +YI AL  ++
Sbjct:   28 RRRMAANARERKRMQGLNTAFDRLRKVVPQWGQDKKLSKYETLQMALSYIMALNRIL 84

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BLAST of basic helix-loop-helix transcription factor amos vs. SwissProt
Match: gi|82189349|sp|O13125.1|ATO7A_XENLA (RecName: Full=Protein atonal homolog 7-A; AltName: Full=Helix-loop-helix protein xATH-5-A; AltName: Full=Protein atonal homolog 5-A; Short=xAth5-A)

HSP 1 Score: 83.1889 bits (204), Expect = 3.393e-19
Identity = 37/57 (64.91%), Postives = 47/57 (82.46%), Query Frame = 0

Query:  139 QRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLI 195
            +RR+AANARERRRM GLN AF+ LR+V+P  G D +LSKYETLQMA +YI AL+ ++
Sbjct:   33 KRRLAANARERRRMQGLNTAFDSLRKVVPQWGEDKQLSKYETLQMALSYIMALSRIL 89

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BLAST of basic helix-loop-helix transcription factor amos vs. nr
Match: gi|1061484329|gb|ODN01506.1| (Protein atonal [Orchesella cincta])

HSP 1 Score: 129.798 bits (325), Expect = 5.723e-34
Identity = 61/79 (77.22%), Postives = 69/79 (87.34%), Query Frame = 0

Query:  116 PGVRKGRGGRKKNTHPPAPQILRQRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANL 194
            P  +KG GGR+KN  PP P +L++RR+AANARERRRMNGLNDAF+RLREVIP+LGSDHKLSKYETLQMAQTYI AL  L
Sbjct:  107 PLRKKGVGGRRKNEKPPTPVVLKKRRLAANARERRRMNGLNDAFDRLREVIPSLGSDHKLSKYETLQMAQTYINALREL 185

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BLAST of basic helix-loop-helix transcription factor amos vs. nr
Match: gi|1215273295|gb|OXA59605.1| (Basic helix-loop-helix transcription factor amos [Folsomia candida])

HSP 1 Score: 128.257 bits (321), Expect = 7.740e-33
Identity = 59/79 (74.68%), Postives = 69/79 (87.34%), Query Frame = 0

Query:  113 GGTPGVRKGRGGRKKNTHPPAPQILRQRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGAL 191
            G  P  RKG GGR+K+  PP P +L++RR+AANARERRRM+GLNDAFE+LR+VIP+LGSDHKLSKYETLQMAQTYI AL
Sbjct:  149 GAIPSKRKGVGGRRKSEKPPPPVVLKKRRLAANARERRRMDGLNDAFEKLRDVIPSLGSDHKLSKYETLQMAQTYINAL 227

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BLAST of basic helix-loop-helix transcription factor amos vs. nr
Match: gi|307202800|gb|EFN82083.1| (Basic helix-loop-helix transcription factor amos [Harpegnathos saltator])

HSP 1 Score: 121.709 bits (304), Expect = 4.137e-32
Identity = 57/94 (60.64%), Postives = 75/94 (79.79%), Query Frame = 0

Query:  104 STPPLTPRPGGTPGVRKGRGGRKKNTHPPAPQILRQRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLIDR 197
            +TPP++PR          +G R+    PP+P +L++RR+AANARERRRMNGLNDAF++LREV+PNLG+DHKLSK+ETLQMAQ+YI AL +L+ R
Sbjct:    3 TTPPVSPR----------KGRRRSRDVPPSPTVLKRRRLAANARERRRMNGLNDAFDKLREVVPNLGTDHKLSKFETLQMAQSYIAALCDLLQR 86

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BLAST of basic helix-loop-helix transcription factor amos vs. nr
Match: gi|1126592733|ref|XP_019698027.1| (PREDICTED: protein Fer3 isoform X2 [Harpegnathos saltator] >gi|1126592735|ref|XP_019698028.1| PREDICTED: protein Fer3 isoform X2 [Harpegnathos saltator])

HSP 1 Score: 125.176 bits (313), Expect = 1.993e-31
Identity = 58/101 (57.43%), Postives = 77/101 (76.24%), Query Frame = 0

Query:   97 LSISSYESTPPLTPRPGGTPGVRKGRGGRKKNTHPPAPQILRQRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLIDR 197
            +S     +TPP++PR          +G R+    PP+P +L++RR+AANARERRRMNGLNDAF++LREV+PNLG+DHKLSK+ETLQMAQ+YI AL +L+ R
Sbjct:  166 ISTQKMSTTPPVSPR----------KGRRRSRDVPPSPTVLKRRRLAANARERRRMNGLNDAFDKLREVVPNLGTDHKLSKFETLQMAQSYIAALCDLLQR 256

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BLAST of basic helix-loop-helix transcription factor amos vs. nr
Match: gi|1080045449|ref|XP_018563929.1| (protein lin-32-like [Anoplophora glabripennis])

HSP 1 Score: 122.094 bits (305), Expect = 2.068e-31
Identity = 59/124 (47.58%), Postives = 87/124 (70.16%), Query Frame = 0

Query:   83 SYGPGDPSVFHSDPLSISSYES----TPPLTPRPGGTPGVRKGRGGRKKNT---HPPAPQILRQRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLIDRTN 199
            S+   + +V + +   +++Y+S    T  LT     +   +K   GR+KN     P +P I+++RR+AANARERRRMNGLN+AF+RLREVIP+L ++HKLSK+ETLQMAQTYI AL  L+++++
Sbjct:   30 SFAKEEETVKNPEMYDVNTYDSFMSTTSDLTDLSSLSEAEKKNTRGRRKNVVRDRPTSPSIMKKRRLAANARERRRMNGLNEAFDRLREVIPSLDAEHKLSKFETLQMAQTYISALRELLEKSD 153

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BLAST of basic helix-loop-helix transcription factor amos vs. nr
Match: gi|769863769|ref|XP_011643742.1| (PREDICTED: protein Fer3-like [Pogonomyrmex barbatus])

HSP 1 Score: 124.02 bits (310), Expect = 4.714e-31
Identity = 58/101 (57.43%), Postives = 77/101 (76.24%), Query Frame = 0

Query:   97 LSISSYESTPPLTPRPGGTPGVRKGRGGRKKNTHPPAPQILRQRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLIDR 197
            +S     +TPP++PR          +G R+    PP+P +L++RR+AANARERRRMNGLNDAF++LREV+PNLG+DHKLSK+ETLQMAQ+YI AL +L+ R
Sbjct:  165 ISTQKMPTTPPVSPR----------KGRRRSRDVPPSPTVLKRRRLAANARERRRMNGLNDAFDKLREVVPNLGTDHKLSKFETLQMAQSYIAALCDLLQR 255

[Close]

BLAST of basic helix-loop-helix transcription factor amos vs. nr
Match: gi|1126592731|ref|XP_011143252.2| (PREDICTED: protein L-Myc-1-B isoform X1 [Harpegnathos saltator])

HSP 1 Score: 124.79 bits (312), Expect = 1.039e-30
Identity = 58/101 (57.43%), Postives = 77/101 (76.24%), Query Frame = 0

Query:   97 LSISSYESTPPLTPRPGGTPGVRKGRGGRKKNTHPPAPQILRQRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLIDR 197
            +S     +TPP++PR          +G R+    PP+P +L++RR+AANARERRRMNGLNDAF++LREV+PNLG+DHKLSK+ETLQMAQ+YI AL +L+ R
Sbjct:  228 ISTQKMSTTPPVSPR----------KGRRRSRDVPPSPTVLKRRRLAANARERRRMNGLNDAFDKLREVVPNLGTDHKLSKFETLQMAQSYIAALCDLLQR 318

[Close]

BLAST of basic helix-loop-helix transcription factor amos vs. nr
Match: gi|1325288952|ref|XP_023329245.1| (pancreas transcription factor 1 subunit alpha-like [Eurytemora affinis])

HSP 1 Score: 121.324 bits (303), Expect = 1.347e-30
Identity = 54/83 (65.06%), Postives = 70/83 (84.34%), Query Frame = 0

Query:  120 KGRGGRKKNTHPPAPQILRQRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLIDRTNQDN 202
            + +GGRKKN  PP+P IL+QRR AANARER+RMNGLNDAFERLR+V+PN+ ++ K+SK ETL+MAQ YI  LANL++  N++N
Sbjct:   99 RKKGGRKKNLRPPSPAILKQRREAANARERKRMNGLNDAFERLRDVVPNMTTEQKMSKIETLRMAQAYIKTLANLVE--NEEN 179

[Close]

BLAST of basic helix-loop-helix transcription factor amos vs. nr
Match: gi|1153705351|ref|XP_020285101.1| (protein Fer3-like [Pseudomyrmex gracilis])

HSP 1 Score: 122.479 bits (306), Expect = 1.774e-30
Identity = 60/111 (54.05%), Postives = 82/111 (73.87%), Query Frame = 0

Query:   88 DPSVFHSDP-LSISSYESTPPLTPRPGGTPGVRKGRGGRKKNTHPPAPQILRQRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLIDR 197
            +P V   +P +S     +TPP++PR          +G R+    PP+P +L++RR+AANARERRRMNGLNDAF++LREV+P+LG+DHKLSK+ETLQMAQ+YI AL +L+ R
Sbjct:  157 EPRVNCWEPVISTQKMPTTPPISPR----------KGRRRSRDVPPSPTVLKRRRLAANARERRRMNGLNDAFDKLREVVPSLGTDHKLSKFETLQMAQSYIAALCDLLQR 257

[Close]

BLAST of basic helix-loop-helix transcription factor amos vs. nr
Match: gi|795086951|ref|XP_011878592.1| (PREDICTED: protein Fer3-like [Vollenhovia emeryi])

HSP 1 Score: 122.479 bits (306), Expect = 1.871e-30
Identity = 56/89 (62.92%), Postives = 72/89 (80.90%), Query Frame = 0

Query:  109 TPRPGGTPGVRKGRGGRKKNTHPPAPQILRQRRVAANARERRRMNGLNDAFERLREVIPNLGSDHKLSKYETLQMAQTYIGALANLIDR 197
            T R   TP V   +G R+    PP+P +L++RR+AANARERRRMNGLNDAF++LREV+P+LG+DHKLSK+ETLQMAQ+YI AL +L+ R
Sbjct:  169 TQRMSTTPPVSPRKGRRRSRDVPPSPTVLKRRRLAANARERRRMNGLNDAFDKLREVVPSLGTDHKLSKFETLQMAQSYIAALCDLLQR 257

The following BLAST results are available for this feature:

BLAST of basic helix-loop-helix transcription factor amos vs. L. salmonis genes
BLAST of basic helix-loop-helix transcription factor amos vs. SwissProt
BLAST of basic helix-loop-helix transcription factor amos vs. nr

BLAST of basic helix-loop-helix transcription factor amos vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 13


Match Name	E-value	Identity	Description
EMLSAG00000000040	2.104e-30	68.54	supercontig:LSalAtl2s:LSalAtl2s1006:57802:58891:-1...	[more]
EMLSAG00000008600	4.654e-23	65.57	supercontig:LSalAtl2s:LSalAtl2s52:789170:789598:-1...	[more]
EMLSAG00000001846	5.820e-16	49.28	supercontig:LSalAtl2s:LSalAtl2s131:305784:306913:1...	[more]
EMLSAG00000012504	5.803e-15	52.78	supercontig:LSalAtl2s:LSalAtl2s921:126459:127335:-...	[more]
EMLSAG00000009090	7.740e-12	50.00	supercontig:LSalAtl2s:LSalAtl2s571:239495:250164:1...	[more]
EMLSAG00000006769	1.292e-11	46.67	supercontig:LSalAtl2s:LSalAtl2s379:476161:478870:-...	[more]
EMLSAG00000005912	1.384e-10	45.31	supercontig:LSalAtl2s:LSalAtl2s31:165920:167001:-1...	[more]
EMLSAG00000008986	2.125e-10	44.44	supercontig:LSalAtl2s:LSalAtl2s562:113751:114473:-...	[more]
EMLSAG00000002307	2.214e-10	33.33	supercontig:LSalAtl2s:LSalAtl2s1437:29415:30176:1 ...	[more]
EMLSAG00000009706	6.750e-9	44.07	supercontig:LSalAtl2s:LSalAtl2s626:223487:231342:1...	[more]

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BLAST of basic helix-loop-helix transcription factor amos vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|20137578\|sp\|Q9Y0A7.2\|AMOS_DROME	1.177e-24	68.25	RecName: Full=Basic helix-loop-helix transcription...	[more]
gi\|82190148\|sp\|O57598.2\|ATOH7_CHICK	1.676e-22	54.22	RecName: Full=Protein atonal homolog 7; AltName: F...	[more]
gi\|44889049\|sp\|Q10574.2\|LIN32_CAEEL	2.380e-22	51.76	RecName: Full=Protein lin-32; AltName: Full=Abnorm...	[more]
gi\|13124679\|sp\|P48987.2\|ATO_DROME	2.640e-22	58.67	RecName: Full=Protein atonal	[more]
gi\|1346597\|sp\|P48985.1\|ATOH1_MOUSE	3.239e-20	65.63	RecName: Full=Protein atonal homolog 1; AltName: F...	[more]
gi\|82189350\|sp\|O13126.1\|ATO7B_XENLA	3.593e-20	53.33	RecName: Full=Protein atonal homolog 7-B; AltName:...	[more]
gi\|61211736\|sp\|Q5IS79.1\|ATOH1_PANTR	4.042e-20	68.33	RecName: Full=Protein atonal homolog 1	[more]
gi\|3913115\|sp\|Q92858.1\|ATOH1_HUMAN	4.294e-20	68.33	RecName: Full=Protein atonal homolog 1; AltName: F...	[more]
gi\|82211814\|sp\|Q8AW52.1\|ATOH7_DANRE	9.555e-20	66.67	RecName: Full=Protein atonal homolog 7; AltName: F...	[more]
gi\|82189349\|sp\|O13125.1\|ATO7A_XENLA	3.393e-19	64.91	RecName: Full=Protein atonal homolog 7-A; AltName:...	[more]

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BLAST of basic helix-loop-helix transcription factor amos vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1061484329\|gb\|ODN01506.1\|	5.723e-34	77.22	Protein atonal [Orchesella cincta]	[more]
gi\|1215273295\|gb\|OXA59605.1\|	7.740e-33	74.68	Basic helix-loop-helix transcription factor amos [...	[more]
gi\|307202800\|gb\|EFN82083.1\|	4.137e-32	60.64	Basic helix-loop-helix transcription factor amos [...	[more]
gi\|1126592733\|ref\|XP_019698027.1\|	1.993e-31	57.43	PREDICTED: protein Fer3 isoform X2 [Harpegnathos s...	[more]
gi\|1080045449\|ref\|XP_018563929.1\|	2.068e-31	47.58	protein lin-32-like [Anoplophora glabripennis]	[more]
gi\|769863769\|ref\|XP_011643742.1\|	4.714e-31	57.43	PREDICTED: protein Fer3-like [Pogonomyrmex barbatu...	[more]
gi\|1126592731\|ref\|XP_011143252.2\|	1.039e-30	57.43	PREDICTED: protein L-Myc-1-B isoform X1 [Harpegnat...	[more]
gi\|1325288952\|ref\|XP_023329245.1\|	1.347e-30	65.06	pancreas transcription factor 1 subunit alpha-like...	[more]
gi\|1153705351\|ref\|XP_020285101.1\|	1.774e-30	54.05	protein Fer3-like [Pseudomyrmex gracilis]	[more]
gi\|795086951\|ref\|XP_011878592.1\|	1.871e-30	62.92	PREDICTED: protein Fer3-like [Vollenhovia emeryi]	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold22_size673200	supercontig	scaffold22_size673200:551694..552371 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold22_size673200-processed-gene-5.8-mRNA-1	snap_masked-scaffold22_size673200-processed-gene-5.8-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold22_size673200:551694..552371+

gene from alignment at scaffold22_size673200:551694..552371+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold22_size673200-processed-gene-5.8 ID=snap_masked-scaffold22_size673200-processed-gene-5.8|Name=basic helix-loop-helix transcription factor amos|organism=Tigriopus kingsejongensis|type=gene|length=678bp|location=Sequence derived from alignment at scaffold22_size673200:551694..552371+ (Tigriopus kingsejongensis)
ATGGATTTGAATGAAGCCCATCCGACTAACTGCTTTGGTGGTGAGGAGAG
CTTCATGTACGAGGATTCGCCCTCAGGTCACCCACAACACCAGCATCACC
ACAGCCAGCAGGCTCGGTACATGTGCGCCTCCTCTGACCCCAGCTACGCC
AGTTTCCCCCCTTCGGACTACTTGCACACGCCAGAGAGCCAGCCGCCACC
TCCAGTGGGGCCCTACGGCGGCCTCAACGGTTTCGAGACCGACCTCAGCT
ACGGGCCAGGTGACCCATCCGTGTTCCACAGTGATCCCCTCTCCATCTCC
AGCTACGAGAGCACGCCCCCGCTTACGCCACGCCCAGGAGGCACGCCCGG
TGTACGGAAAGGGCGGGGTGGGCGGAAGAAGAACACCCACCCGCCTGCAC
CCCAGATTCTGCGGCAGCGCCGCGTGGCCGCCAATGCCCGTGAAAGGCGG
CGCATGAACGGGCTCAACGACGCCTTCGAGCGCCTCCGGGAAGTGATCCC
CAATCTGGGCTCGGACCACAAATTGTCGAAATACGAGACCCTCCAAATGG
CCCAGACGTACATTGGGGCCCTGGCCAATCTCATAGATCGGACCAATCAG
GACAATAACAACGGCGGCGGGAGCTGCGCCGTGTTCCACCCCGGCCCGTC
CCACTTTGCCCAGCATCCAGTGTCCTAG

Synonyms

The feature 'basic helix-loop-helix transcription factor amos' has the following synonyms


Synonym
Tk12698

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