abc transporter atp-binding protein, snap_masked-scaffold2503_size14991-processed-gene-0.2 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000007660 (supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 gene:EMLSAG00000007660 transcript:EMLSAT00000007660 description:"maker-LSalAtl2s445-augustus-gene-0.18") HSP 1 Score: 276.174 bits (705), Expect = 6.808e-85 Identity = 175/485 (36.08%), Postives = 270/485 (55.67%), Query Frame = 0 Query: 64 DIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGT---GGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLA-KPVQGAVNFSKVTFAYD--PDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGG-SITIDGEELNTLAKDSLRES-IGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADL 540 +R DL+ I + +FD +TG+I++R+ DV + I GL S Q + MY+ + ++ + +P + LG R K + + A+ + I+ IR ++ +A E E ++R + R L V+ + +F +VLGT GG + D +L G+L F + + ++++ L + A+ R+FE ++ S G ++ G V F +TF+Y P+Q +LKD SL P +T+AL G++G GK+TI LL RFY+ +GG S+ IDG + L LR S IGY+ QE LF +V EN+ NA+D ++++A +AA DFVR P T +GERGV +SGG+KQR++IARALLK+PPIL+LDEAT+++D ++E ++Q+ALD+L K RTS+VIAHRLSTI+NAD I V++KG + E GT+ L K G ++ L Sbjct: 187 SLRKDLFNSIICQDIAFFDEHKTGEIVSRLSADVQEFKSSFKLVISQGLRSSAQASGCIVSMYMISPQMTSAMGVIVPTVILGGTYIGSYLRVLSKKAQAQVAKATAVGEECISNIRTVRGFAMEDAEMELYSREVDKTRDFNEALGLGIGVFQGASNFFL---NSIVLGTITYGGYLMSDDNLNPGQLMSFLVSVQTIQRSITQVSLLFGHLVKGMASGSRIFEYIEKVPLIPISGGVKIPYHSFFGDVEFKNITFSYPTRPEQAVLKDFSLRIPPSKTVALVGTSGGGKTTIAALLERFYDINGGGSLEIDGINIRDLDPSWLRGSAIGYINQEPVLFATSVIENIRYGRPNATDNEVYEAAKAAHVDDFVRTFPDGYSTILGERGVTVSGGQKQRIAIARALLKNPPILILDEATSALDAESERIVQEALDKLSKGRTSLVIAHRLSTIKNADVIAVIDKGVMAEIGTHAALKRKGGIYSRL 668
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000003104 (supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-1 gene:EMLSAG00000003104 transcript:EMLSAT00000003104 description:"maker-LSalAtl2s174-augustus-gene-3.18") HSP 1 Score: 223.402 bits (568), Expect = 1.655e-63 Identity = 129/362 (35.64%), Postives = 206/362 (56.91%), Query Frame = 0 Query: 174 DNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQ----GAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELL 531 D++ +K + EA E +++ + T +L+ + ++ + + + V ++ + +G LT G+L LL P++ L + + S +F+++ + + +S G + ++ F V F Y+ D+ I +S + G+TIA+ G +G+GKST+V LL RFYE GSI I +N + DSLR I V Q+ LFN T+ N+ + N SDED++K + A + +R+ P+ T VGERG+KLSGGEKQR++IARA LKD PI++ DEAT+S+D+ TE +I +AL + +T+I+IAHRLST+ +AD I+VL G+VIE GT++ELL Sbjct: 225 DSLINYETVKYFNNEAYECQQYDKSLLKYETASLKTTESLSLLNFGQNAIFSVALSAIMMMAAKDISNGALTVGDLIMVNGLLFQLSLPLNFLGSVYREIRQSLIDMQVMFQLMATPSKITSSKGATEINFINNMEDASITFDDVKFGYNIDKNIANGLSFSVESGKTIAIVGESGSGKSTLVRLLYRFYEPQLGSIKIGNYNINEVTLDSLRRQISIVPQDCVLFNDTIFHNIKYGNLNCSDEDVYKVAKLAEIDNAIRSWPQGYLTQVGERGLKLSGGEKQRVAIARAALKDSPIIIFDEATSSLDSITETMIMKALKRVTSGKTAIIIAHRLSTVVHADEIFVLSNGKVIERGTHEELL 586
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000010048 (supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1 gene:EMLSAG00000010048 transcript:EMLSAT00000010048 description:"snap_masked-LSalAtl2s662-processed-gene-1.13") HSP 1 Score: 219.164 bits (557), Expect = 5.690e-63 Identity = 119/278 (42.81%), Postives = 179/278 (64.39%), Query Frame = 0 Query: 276 SRAAADRVFEILDSEDEPDASDGTRL------AKPVQGAVNFSKVTFAYDPDQP---ILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWK-ALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLA-KDGQFADLAN 542 +R AA VF+I+ S SD L A P G + F V F Y P +P +L +S +A PG+T+AL G +G GKST++ L+ RFY+ G ++IDGE++ TL LR IG V QE LF +++EN+ + + E + +AA A DF++ LPK+ +T VGE+G LSGG+KQR++IARAL+++P ILLLDEA++++D+Q+E ++Q ALD+ K RT+I++AHRLSTI++AD I V++ G ++ GT++ L + K G + L N Sbjct: 207 ARGAASSVFQIIQSTPAIK-SDYDHLQRQQDKAPPFTGRITFKNVHFEY-PSRPTVKVLSGLSFEASPGKTLALVGPSGCGKSTVIQLIQRFYDPSFGVVSIDGEDITTLDPHWLRSHIGIVGQEPVLFEYSIKENITMGLQGEISEKMIDDTCKAANAYDFIQRLPKKYDTIVGEKGALLSGGQKQRIAIARALIRNPSILLLDEASSALDSQSEFIVQSALDKARKGRTTIIVAHRLSTIRSADAILVMKDGYRVDYGTHESLKSNKTGLYCSLVN 482
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000003611 (supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 gene:EMLSAG00000003611 transcript:EMLSAT00000003611 description:"augustus_masked-LSalAtl2s197-processed-gene-0.4") HSP 1 Score: 198.364 bits (503), Expect = 1.225e-54 Identity = 148/487 (30.39%), Postives = 247/487 (50.72%), Query Frame = 0 Query: 65 IRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQ-IGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEAD---EHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEI--LDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQP-ILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNA-SDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDEL-LAKDGQFADLAN 542 I + Y +I R P+ +FD+ G I+ R +D++ + +L I L L +G V L++ + + + F+ + IY +R + Q + S + + +++ G+ I+AY A++ E +N + R ++ +W A+ ++ L + G ++ T V G + G + + L+L+ ++ L + ++ A +R+ E LD E E T P QG V F + Y + +LK I+ G+ + + G TGAGKS++ L R E G I IDG++++TL LRES+ + QE LF+GT+R NL NA SD D+W L + +++R L L ++ E G+ LS G++Q + +ARALL+ IL+LDEATA+VD +T+ IQ+ + + T + IAHRL TI + D+I VL+KG VIE G+ +EL + D F + N Sbjct: 915 IHNQTYDRIMRAPISFFDSTPQGRILNRFSKDISICDNILGSNIRQWLXCLFXFLGIVILIVSVLPLFLLFALPTSLVFILIQN-IYVASSRQLKRLQSVTRSPIYSHFSESLNGLSSIRAYGAQSKFILESINKIDTNQRCNYPSIIANRWLAMRLETIGNLCIFGXAILTMTNPELVGPGKV--GLVISYALILT---QNLNWLXRQTSEIETNIVAVERLKEYAGLDIEKEWRLHKDTSYNWPSQGKVEFKNYSLRYKANSDLVLKKINFTIFGGERVGIVGRTGAGKSSLSVALFRIVEAANGQILIDGKDISTLGLHDLRESLTVIPQEPLLFSGTLRSNL--DPENAFSDHDIWNTLGSVHLKEYIRDLKDGLNHSISEGGLNLSSGQRQLMCLARALLRSCKILILDEATAAVDWETDEKIQETIRCYFPSCTILTIAHRLKTIIDYDKILVLDKGTVIEFGSPNELYMNSDSVFHSMIN 1393 HSP 2 Score: 125.946 bits (315), Expect = 1.618e-30 Identity = 129/511 (25.24%), Postives = 242/511 (47.36%), Query Frame = 0 Query: 51 ILLNNHFEQSVIFDIR------SDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMY-LTNWEVA-----LWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFL-GMVGYVLVLGTGGMAVMDGD---LTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSED-EPDASDGTRLA---KPVQG-AVNFSKVTFAYDPD--QPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLW-KALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQT-ELLIQQALDE---LMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAK 533 +LL +FE + +R S +YRK +L + G+I+ + DV+ + L+ + L S QI + MY W + L T+P+ I S+ + Q + + +L++ + GIR +K YA E N++ G +R + ++K A + M F+ +++ L + VM D LT + F ++ P++ + A+S+ + R+ ++L S++ + DA + + K QG A+ F + + + L +I+L K G A+ G+ G+GKS++++ I GE + K ++ I YV QE+++ N +++ N++ DE+ + + LE + LP ET +GERG+ LSGG++QR+S+ARA+ D + + D +++D+Q + + L+ ++K++T +++ H +S + + I V+ KG++I EGTY ELL K Sbjct: 285 VLLAKYFEIVFLVSMRIRASLTSLVYRKCLKLSNSSRKNKSVGEIVNIMSVDVSRIAD-LMPFLTLLWSSPFQIVVSVIFMYNELGWAIIGGTGILLITIPV------NAILSYFGKKFQMKQMKAKDNRTKILNEVLGGIRILKLYAWEPSY---INKIEG-IRGVEIGILKKAAWLTSFMGFIWSSTPFIVALASFATFVMVDDRNILTAEKAFVTQSYINKMKMPMAXFPFVIVXAISATVSLKRINQLLTSDELQKDAVERVPMKINQKIDQGDAIVIRDGNFKWSTEDSENTLSNINLRIKHGSLTAIVGTVGSGKSSLIS-------------AILGEMVKKSGKVRIKGQIAYVPQESWMQNTSLKNNILFG--KPYDEEWYNQVLEYCCLTYDLSLLPAGDETEIGERGINLSGGQRQRISLARAIYSDADVYIFDNPLSALDSQVGKSVFNNVLNNNTGIIKDKTRLLVTHGISYLPHVHHIAVMLKGEIIHEGTYQELLEK 769
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000004490 (supercontig:LSalAtl2s:LSalAtl2s2344:77714:79426:-1 gene:EMLSAG00000004490 transcript:EMLSAT00000004490 description:"maker-LSalAtl2s2344-augustus-gene-0.12") HSP 1 Score: 173.326 bits (438), Expect = 2.542e-48 Identity = 129/433 (29.79%), Postives = 214/433 (49.42%), Query Frame = 0 Query: 47 NCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGT---GGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYD--PDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASD-EDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEAT 473 N R+ L Q + IRS L+ I + +FDT +TG+++ R+ D + + L I G+ S I A +M + ++AL +P +A A ++ +++ +D L + IA IR ++A+ E E + ++ ++ + +K + + G G +++L GG V +T G L F L ++ + + + AA R++EI+D G L P+ G + F KV F+Y PD I ++L+ + Q +A+ GS KST+ +LL R Y+ + G + IDG ++ L LR IG V QE LF+GT++EN++ + E++ A + + A DF+ P + +T VGERGV LSGG+KQR++IA A+LK+P L+LDEAT Sbjct: 51 NFGRVYLIQLSGQRITARIRSRLFSSITKQETAFFDTNKTGELVNRLSSDSMLVSQALTSQISSGMRSSIMALAGGGMMLFMSPQLALVGLSVVPPVAGWAVWMGKKVKNISHEYQNTLADATHLAQERIANIRTVRAFGKEVQESMAYDE---KMSLVLDKGVKEALIQAKFYGMTGXTGNLIILSVMFYGGFLVTQDVITVGNLTSFILYSGYVGIGLNGVSSFYAEIMKALGAATRIWEIMDRTTHMPLDTGLILPMPLNGHITFEKVGFSYPSRPDHSIFDGLNLNIESKQILAIVGS----KSTLTSLLLRLYDPNMGRVCIDGTDIRELNTTWLRNQIGIVMQEPVLFSGTIKENILYGTEGKIEHEEIVSAAKESNAHDFIMNFPDRYDTLVGERGVLLSGGQKQRVAIAXAILKNPQXLILDEAT 476
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000002221 (supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 gene:EMLSAG00000002221 transcript:EMLSAT00000002221 description:"maker-LSalAtl2s1420-augustus-gene-0.12") HSP 1 Score: 173.711 bits (439), Expect = 2.789e-46 Identity = 146/494 (29.55%), Postives = 253/494 (51.21%), Query Frame = 0 Query: 65 IRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYA------AEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYD--PVSKLHQLNQMAL---SSRAAADRVFEILDSEDE-PDASDGTRLAK--PVQGAVNFSKVTFAYDPD-QPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLA-KDGQFADLAN 542 + + + I + P+ +FDT G I+ R+ +D+ ++ V+ + + + + + +V+ +T + A+L I IY +R + + S S + + + ++G I+AY +E++ V+ N+ + T + R W AV L +VG ++V +AV L R L + LS+ Y + L+ L +MA ++ A +R+ E +E E P + T+ + P +G ++F + Y +LK++SLD + G+ I + G TGAGKS+ + R E G+I IDG ++ L LR I + Q+ LF+G++R NL D ++ ++ +A+ + F+ +L LE +V E G LS G++Q + +ARALL+ +L+LDEATA+VD +T+ LIQ+ + K+ T I IAHRL+TI + +I VL+ G+ +E GT ELLA K QF + + Sbjct: 1075 LHNQMLESILKSPMSFFDTTPQGRILNRLGKDLDVLDSVMPMVLRGWISCFLGVLSSLIVVMVTTPVFIIPASLIIICYFFIQRIYVATSRQLKRLESSSRSPIXSFFSETVSGAATIRAYGQSSTFISESESKVDDNQKANFPATVSNR---WLAVR------LEVVGNLIVFTAALLAV----LGRDSLSPGLVGLSVSYALAVTASLNWLVRMASEVETNIVAVERIQEYTKAEKEAPWIIEDTKPDEDWPRKGEISFKNYSTRYREGLDYVLKNVSLDIEGGEKIGIVGRTGAGKSSFTLSMFRIIEPVTGNIIIDGVDITKLGLHQLRSRITIIPQDPVLFSGSLRRNLDPLDE-YNETNIMEAISHSHLKPFIDSLKDGLEYHVSEGGENLSLGQRQLICLARALLRRTRVLILDEATAAVDLETDNLIQKTIRSEFKDSTVITIAHRLNTIMDYSKILVLKNGERVEYGTVAELLADKKSQFYSMCS 1554 HSP 2 Score: 137.117 bits (344), Expect = 4.091e-34 Identity = 135/528 (25.57%), Postives = 245/528 (46.40%), Query Frame = 0 Query: 34 ALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLA----------LGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLV----LGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPV-QGAVNFSKVTFAY--DPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQAL----DELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADL 540 +L L FF K + ++I + S+I S +YRK R+P TG+I+ + D + L+ I + QI + +YL LW TL LA FI S + Q + LL++ + GI+ +K YA E +F + +R+ ++++ SF+ LV T ++ + L + F L ++ P+S L + + + + R+ + ++SE+ + + + A P + A+N K + D D+ IL D+SLD + G +A+ G+ G+GKS++++ + + G IT+ G SI Y Q+A++ N +++ N +L +++ + + +EA + LP ET +GE+G+ LSGG+KQR+S+ARA+ I LLD+ ++VD+ I + ++K++T +++ H ++ + D+I V++ G+V E GTY ELL + G FA+ Sbjct: 371 SLVLSKFFYKMYVVGMKI------KTSLI----STIYRKALRVPTSTKKNISTGEIVNLMSVDAQKIVD-LMPYINTVWSAPFQI---TIAIYL------LWQTLGPSVLAGVLVMILLIPFNGFIASR-TKTLQTNQMKEKDERIKLLNEVVQGIKIVKLYAWEQ----SFLDIISNVRSKEVKILTHIGYLQAGNSFIWTCAPFLVSLVTFATFILSSPENVLDSEKAFVCLTLFNILRFPLSMLPMIIGSMVLAGVSIKRINKFMNSEEIDEEAVEKKTAYPDDKFAINLEKACLKWESDEDKNILSDVSLDIEVGSLVAVVGTVGSGKSSLLSAILGEMDKVSGLITVRG-------------SIAYGAQQAWVLNTSLKNN-ILFNKSYDGDKYTRIVEACALKSDLDMLPGGDETEIGEKGINLSGGQKQRVSLARAVYSGSDIYLLDDPLSAVDSHVGKHIYDNVISSSSGILKDKTRVMVTHGVTYLPFTDKIIVMKDGRVSEIGTYKELLRQKGAFAEF 859
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000001655 (supercontig:LSalAtl2s:LSalAtl2s128:1836948:1854487:1 gene:EMLSAG00000001655 transcript:EMLSAT00000001655 description:"augustus_masked-LSalAtl2s128-processed-gene-18.4") HSP 1 Score: 172.555 bits (436), Expect = 6.194e-46 Identity = 133/491 (27.09%), Postives = 234/491 (47.66%), Query Frame = 0 Query: 75 RLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQI-GAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRD-------SASDLNALLHDNIAGIRQIKAYAA------EADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALS------SRAAADRVFEILDSEDEPDASDGTRLAK--PVQGAVNFSKVTFAYDPDQP-ILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQ-LETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELL-AKDGQFADL 540 R + +FD+ G I+ R D A++ L + + L + + G V + +Y W + I L LG F Y + R G RD S S + ++ + G++ I+A A E +E V N+ + R W + L ++G ++V ++V++ + L + +L +L ++ +S A +R ++ +D E S + P QG V F + Y P +L ++ KP + I + G TGAGKS+++ L R + G I +DG + L R + Q+ F+F+GT+R+NL ++ SD++LW +++ + + + + L+T +G+ G LS G+KQ L +ARA++ ++ +DEATASVD +T+ LI+ L ++T I IAHR+ T+ N+DRI+V+ GQ+IEEG ++L+ + + +F L Sbjct: 984 RAKIYFFDSTPAGRILNRFSSDTYAIDDSLPFILNIFLSQIFGVFGRVLVCVYAVPW-------ILIVLLPLGLFYYEIQCKYR-PGSRDLKRISSVSLSPIYEHFNETVHGLKIIRASKASQRFLLENEELVECNQ---KARYAAFSASLWLEIR------LQLIGSIVVFSIALISVINFESVDAGLVGLAVSYAL-----GMTXRLAEVVVSFTETEKELVAVERAYDYIDRIYEESYSGVLNMPYNWPNQGVVEFKDIRLRYKDHLPYVLNKVNFKTKPKEKIGIVGRTGAGKSSLIAALFRLSSFSHGEIMVDGIRIRLLPLIDFRRQFAVIPQDPFIFSGTIRQNLDPYAQH-SDQELWDSIKLSYLYNIIYSFGSSGLDTLIGDGGKSLSIGQKQLLCLARAIITSAKVVFIDEATASVDKETDRLIRNVLKTAFNDKTVITIAHRIETVLNSDRIFVMSNGQIIEEGKPEDLIKSPNSEFRKL 1451 HSP 2 Score: 83.9593 bits (206), Expect = 4.982e-17 Identity = 80/363 (22.04%), Postives = 160/363 (44.08%), Query Frame = 0 Query: 176 IAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGT--GGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLH-----------QLNQMA-LSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAV---NFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVD-NQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQ 520 I GIR IK Y E+ F + R + +KW +L V++ + + + LT ++F L ++ P + + ++A S + +R+ + +DE T+ +K ++ + + +F + D L++I + K + + + G G+GK+T +N + E G I++ +D L I YV Q ++ N ++R+N++ + + K ++A + L + T GE+G LSGG+K R+++ARA+ +D I L+D+ +S+D N + + + L+K +T I+ H I +A+ + ++ G+ Sbjct: 493 IEGIRVIKYYCWES----FFTDKTNSHRNNEIYYLKWRKYLDAVCVYLWASTPVIISVSTFATYSALGNPLTAAKVFTSMALFAMLSGPFNAFPFVINGLIEANVSIKRLARFLSLPSINRIKYFTEYKDE-----NTKASKEIETKIPDIQIMEASFGFTKDCFTLRNIDVSIKRQEFVGVLGPVGSGKTTFLNAILGELEKQSGKISV---------RDPL-SGIAYVQQVPWIQNKSIRDNILFGEMYIHGK-YTKVIKACCLDHDFKHLHRGDHTIAGEKGAALSGGQKARIALARAIYQDKDIYLIDDVFSSLDVNVGYKVYTEVMLNLLKRKTRILCTHNPQYINDANIVIKIKDGE 835
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000008248 (supercontig:LSalAtl2s:LSalAtl2s498:229862:245360:1 gene:EMLSAG00000008248 transcript:EMLSAT00000008248 description:"maker-LSalAtl2s498-snap-gene-2.25") HSP 1 Score: 164.081 bits (414), Expect = 4.965e-43 Identity = 147/493 (29.82%), Postives = 228/493 (46.25%), Query Frame = 0 Query: 65 IRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLV-SLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAE---ADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSR------AAADRV--FEILDSEDEPDASDGTRLAK-PVQGAVNFSKVTFAYDPD-QPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAK-DGQFADLAN 542 I L + R PL +FDT G I+ R +D+ L I + + S +G + ++ W + I + + F Y AR + + S S + + + + GI I+A+ DE+VN + + T+ +W AV L +G +LV+ ++ +RG + LSL Y +S LN + S + +R+ +E + E D + P G + F Y +LK I+ + G+ I + G TGAGKS++ L R E GSI IDGE + L LR I + Q+ LF+G++R NL + A D D+W ALE + FV L L +V E G LS G++Q + +ARA+L+ IL+LDEATA++D +T+ LIQ + K+ T + IAHR++TI +++RI VL+ G + E LLA D F L N Sbjct: 1035 IHGKLLENVLRAPLSFFDTNPLGRILNRFSKDIDVAXTTLPFNIRMMIAQSFNVLGTIVIICIALPWFFVIILPAVICYALIQKF-YISCARQVKRIESISRSPIYSHFAETLTGIPTIRAFGMVHHFIDENVNKIDFNAKCYFPTVISSRWLAVR------LETLGNILVIFVALFSIT----SRGTTDPGMVGLSLSY-ALSVTTILNMLITVSTDVETNMVSVERIKEYENIPQEAPYDLPNSDPPPNWPEHGVIKFDNYKTRYRKGLDLVLKGINCTIQKGEKIGIVGRTGAGKSSLTLALFRIIEPSEGSIYIDGENIRFLGLGKLRSRITIIPQDPILFSGSLRMNLDPFEAFA-DRDIWIALEYSHLKSFVWNLGDGLNFSVLEGGRNLSVGQRQLICLARAILRKTQILVLDEATAAIDLETDDLIQSTIRSEFKDSTVLTIAHRINTIMDSNRIMVLDAGTIAEFDDPQNLLANPDSMFYSLVN 1514 HSP 2 Score: 117.087 bits (292), Expect = 1.413e-27 Identity = 83/278 (29.86%), Postives = 146/278 (52.52%), Query Frame = 0 Query: 273 ALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQG--AVNFSKVTFAYDPDQPI--LKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWK-ALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQT-ELLIQQALDE---LMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAK-DGQFADL 540 A+ S+ + DR+ L+ ED D ++ QG AV V+ +++ D+ + L+DI LD + G +A+ G G+GKS++++ + E GSI +DG+ + Y Q+ +L N T+R N++ R ++ L++ ++A + + LP T +GERG+ LSGG+K R+S+AR + I +LD+ ++VD L + + L+KN+T I + H + D+I V++ G + E GTY +L+ K +G+FA Sbjct: 583 AIQSKVSLDRINLFLNKED----LDLLAISHESQGSHAVKMCNVSLSWETDEGLNTLEDIDLDIEKGSLVAIVGQVGSGKSSLLSGILGEMEIVRGSINVDGQTI-------------YAPQQPWLQNETLRNNILFGKR--FNKKLYRRVIDACALSPDLDMLPAGDLTEIGERGINLSGGQKARVSLARCTXNNGDIYILDDPLSAVDVHVGRHLFENVISSQTGLLKNKTRIFVTHGAIFLPQTDKIIVMKNGVISESGTYRDLIEKENGEFAQF 841
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000011700 (supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 gene:EMLSAG00000011700 transcript:EMLSAT00000011700 description:"maker-LSalAtl2s812-augustus-gene-0.6") HSP 1 Score: 152.91 bits (385), Expect = 2.914e-39 Identity = 126/487 (25.87%), Postives = 238/487 (48.87%), Query Frame = 0 Query: 65 IRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSA-SDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLM---KWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGD-LTRGEL-------FKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEP--DASDGTRL--AKPVQGAVNFSKVTFAYDPD-QPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNA--SDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLA 532 + L++ I + P+ +FDT G I+ R +D+ ++ + I + A ++ + N + + TL I + I S + + K A S + + + ++GI ++AY+ E + F R + ++ +W + + ++G ++ + +V+ D +T G+L +LS S L ++ A +R+ E + E E + + +L + P++G + ++ Y D +L+DI++ PG I + G TG+GKST+ L R E + G ITIDG ++ + +LR + + Q+ LF+GT+R NL D D +L ++L+ A DF++ L+ + E G +S G++Q + +ARALL+ +L++DEATA+VD++T+ LIQ+A+ + ++ T + IAHRL T+ + +I V++ G +IE + LL+ Sbjct: 1505 LHGTLFQCIIKTPMSFFDTTPLGRILNRFGQDIEVLDTKMSFCIFGSMTGTFAYIATVTIISI-NVPIFIIPTLAIFVVYFVILIVSLSSSRQLKRLSSVATSPIYSHFGETLSGINTVRAYSLEKAFYSEFERRLDEYQKRNFPVIMADRWLGIR------INLIGNFIIFASALFSVLSRDTITPGQLGLNVSSSLAITSILSWVIRMYSDLE-------NNIVAVERIKEYSNKESEAPWELEEDLKLNSSWPLKGEITIKNLSLKYRKDLDWVLRDINVHISPGDKIGIVGRTGSGKSTLALALFRLLEVNSGQITIDGVDIKKMGLHTLRSKLTIIPQDPTLFSGTLRLNL---DPFGLFKDMELIESLKHAYLQDFLKE--DGLDKVIAENGENISLGQRQLICLARALLRKNKVLIMDEATAAVDSETDKLIQKAIKDNFRDSTVLTIAHRLQTVLDYSKIIVIDSGCIIEYDSPKNLLS 1972 HSP 2 Score: 128.257 bits (321), Expect = 3.664e-31 Identity = 128/500 (25.60%), Postives = 237/500 (47.40%), Query Frame = 0 Query: 65 IRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERV--LIDGIELGLVSLIQIGAVALVMYLTNWEV---ALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVY--------SPSMSFLGMVGYVL-VLGTGGMAVMDGDLTRGELFKFFLLLSLF---YDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQG-AVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLA---DRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQT-ELLIQQAL--DELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADL 540 I S +YRK R+ DT +G+I+ + DV + + L++ I G + +I A+ L++ + L L IP A + + K + + +N +L GI+ IK YA E+ +F++L +R ++L+K + Y S + F+ + +++ V+ ++D + K F+ +SLF P++ L + S+ + R+ + L SE+ + + Q ++ S + + KDIS+D G IA+ G G+GKS++++ L G + + N + + S+ Y Q A++ N +V++N++ ++N DE L+A + P T +GE+G+ LSGG+KQR+S+ARA+ I LD+ A VD+ + L ++ + + L++ +T I++ H LS + D IY L+ G++ E+GTY EL+ K+ F++L Sbjct: 904 ITSLIYRKALRIHSTRDDTT-SGEIVNLMSVDVQKIVDLMPLLNTIWSGPLQII--AAIYLLINTLGYSALAGVLVMFLLIPINGFIAVRMKNAQMKQMKKKDERVKKMNEILQ----GIKIIKLYAWES----SFSKLISSIRFEEIKLLKLSSKYFGFMMLTISSTTFFISLFTFIVYVVSDPENHILDSE-------KIFVSISLFNILRFPLNMLTHVIGGIASASVSLKRINKFLASEELEEGILVRSNSHDHQAICIHPSSSFSWKGSSESLFKDISMDVNRGNLIAIIGPVGSGKSSLISALL-------GEMLFTSKGTNPV---EIHGSVAYTPQNAWMQNVSVKDNILFGRKFNKNWYDE----VLKACSLESDMEXFPSGDSTEIGEKGINLSGGQKQRISLARAVYSQSDIYFLDDPLAXVDSHVAKHLFEEVIGSNGLLRGKTRILVTHNLSFLHLVDEIYFLKDGEITEKGTYKELMEKNCDFSEL 1371
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000002016 (supercontig:LSalAtl2s:LSalAtl2s1361:43077:48755:-1 gene:EMLSAG00000002016 transcript:EMLSAT00000002016 description:"augustus_masked-LSalAtl2s1361-processed-gene-0.2") HSP 1 Score: 142.51 bits (358), Expect = 7.270e-36 Identity = 80/223 (35.87%), Postives = 129/223 (57.85%), Query Frame = 0 Query: 315 TFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQF 537 +F Y I + SL+ Q + + G +G+GKST++ + R GSITI+G +N + LR+ + + Q+A LF+GT+R NL + + SDE +W L+ A VR P L+T V E G S G++Q L+I +ALL+ P +++LDE+T+++D E+ + L E ++ T I +AHRLS I +R+ V+ +G+++E+G ELL K F Sbjct: 1657 SFEYRRLPGIQQGFSLEIPYRQKVGICGRSGSGKSTLLMGIVRLSRVLQGSITINGININAIPLSRLRKFVITIPQDAVLFSGTIRSNLD-PENDFSDELIWSTLDKADCGKTVRNFPDGLDTCVTENGDNFSLGQRQELNIVKALLRRPRVVILDESTSALDPNREVALHNTLLEAFEDSTLISVAHRLSNIVEYERVLVMGEGRILEDGNPKELLKKPMGF 1878 HSP 2 Score: 86.2705 bits (212), Expect = 9.657e-18 Identity = 60/220 (27.27%), Postives = 114/220 (51.82%), Query Frame = 0 Query: 315 TFAY-DPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQ--TELLIQQALDELMKNRTSIVI-AHRLSTIQNADRIYVLEKGQVIEEGTYDEL 530 TFA+ + +L+ I+L+ K G + G +G+GK+ +++ L + GS+ K ++ +++ + Q +L N T+++N++L R ++ K + A + LP +T +GERGV LSGG++QRL+IAR L +D +S+D++ + + + L L+K R ++ + RL + AD I L+ G + +GT ++ Sbjct: 734 TFAWPKCETNVLQSINLEIKTGSLTIVIGPSGSGKTALISSLIEEMDRITGSV-----------KWNVPDTVALLGQRPWLLNTTIKDNILLG-RPFKEKRYKKVIAACDLQTDIDLLPHGDDTEIGERGVLLSGGQRQRLAIARCLYSKSYCTFMDAPFSSLDSKITSHVFEEGVLKILLKRRRTVFLTTERLDFLHRADHIVALKDGMIKAQGTIQDV 941
BLAST of abc transporter atp-binding protein vs. SwissProt
Match: gi|122064528|sp|Q2LVL0.1|MSBA_SYNAS (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 362.459 bits (929), Expect = 2.291e-117 Identity = 193/517 (37.33%), Postives = 304/517 (58.80%), Query Frame = 0 Query: 26 NGDFYMWIALALGAFFL-KDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILD-SEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADL 540 N + WI LA+ +L K G + + +L + Q ++ D+R+ LY +IQ+ L +F TG +M+R+ DV +++ + D + + + + V++ +W++A+ A + P + R + + L LL + I+G R ++A+ EA E+ F R + +L L+ + A+ SP M FLG +G ++ GG V+ G T G F F L + Y+PV +L +N A A RVF I+D D D + L + + + ++FAYD D P+L++I+L + G+ +A G +G GK+T+VNL+ RFY+ G I IDG ++ ++ SLR IG VTQ+ LFN TVR N+ + S++++ +A AA A DF+ LP+ +T +GE G KLSGGE+QR+SIARALLK+ PIL+LDEAT+S+D + E+ +Q+AL+ LMK RT++VIAHRLSTI+NADRI VL KG+++EEG ++ LLA+ G++ L Sbjct: 68 NAEMLKWIPLAIILIYLVKGGCSYFQAILMSFIGQRIVADLRNRLYEQIQKQSLSFFSKNPTGVLMSRITNDVNSIQGTVSDAVTSLMKDSFTLICLVFVIFYRDWQLAIIAMIVFPLTIYPIAKFGQKMRSVATRTQVTMGSLTTLLQETISGTRIVRAFCMEAHENQRFARENEKLMHLALKSVSINALSSPFMEFLGGIGIAAIIFYGGYQVIKGSSTPGTFFSFLTALIMLYEPVKRLTNVNNTIQQGIAGAQRVFSIIDLVPDIVDRDEAVELPR-ISEKIEIRNISFAYD-DTPVLRNINLTIRAGEVVAFVGMSGGGKTTLVNLIPRFYDVTAGQILIDGHDIRDVSLISLRRQIGIVTQQTILFNDTVRNNIAYGSQGCSEKEIIEAARAANAHDFIVNLPEGYDTVIGELGTKLSGGERQRISIARALLKNAPILILDEATSSLDTEAEMEVQEALERLMKGRTTLVIAHRLSTIRNADRIVVLVKGEIVEEGAHETLLARRGEYYKL 582
BLAST of abc transporter atp-binding protein vs. SwissProt
Match: gi|67468754|sp|Q6AJW3.1|MSBA_DESPS (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 344.739 bits (883), Expect = 7.402e-111 Identity = 191/517 (36.94%), Postives = 302/517 (58.41%), Query Frame = 0 Query: 29 FYMWIA--LALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDE-PDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADLAN 542 F++ I + + FF K L ++ QS+I D R ++ I R L +F TG +++RV+ DV M++ + I L Q+ + V++ NW++AL L IP A+ + R ++ ++++ +LH+ I+G R +KA+ E E F+R L T T++ K+ SP M +G ++ GG V++G T G F F + YDPV ++ Q+N A+A RVF ILD + E D + T LA P + ++ F V+F+Y ++ IL I+L G+ +A+ G +G GK+T+ NL+ RF + GSITIDG ++ + +SLR I VTQ+ LFN T+R N+ + ++E++ +A +AA A F+ LP +T +GE G KLSGG++QR+SIARALL D PIL+LDEAT+++D ++E +Q+AL+ LM+NRT+ VIAHRLSTI+NA RI V++KG+++EEG+++ELL +G++ L N Sbjct: 56 FFLQILPLIIIAIFFTKGVLYYTYAIILERVGQSIIRDFRLKIFAHIHRQSLSFFHNTPTGTLISRVLSDVALMQQAVSTVIIQLLRDFFQVIFLLGVIFYMNWKLALICFLIIPLAAIPIVKFGKIFRKLSTKTQEETAEVSNMLHETISGSRIVKAFCREDYEVERFHRQVETLFTITMKNAKYRVFQSPLMEIIGGFAVAGIIWVGGSEVINGSATPGTFFAFLTAMITAYDPVKRVSQVNSTIQQGLASAQRVFAILDIKPEIEDKPEATSLA-PFKESIEFHDVSFSYGTEK-ILSHINLKVPAGEALAIVGPSGGGKTTLTNLIPRFIDLQEGSITIDGTDIRDVTTNSLRNQIAMVTQQTILFNDTIRNNIAYGKDSCTEEEIRRAAKAAHALTFIEELPNGFDTALGEGGAKLSGGQRQRISIARALLADAPILILDEATSALDTESEREVQKALENLMQNRTTFVIAHRLSTIKNASRIVVVKKGKIVEEGSHEELLKLEGEYQLLYN 570
BLAST of abc transporter atp-binding protein vs. SwissProt
Match: gi|81827826|sp|Q6G868.1|Y1788_STAAS (RecName: Full=Putative multidrug export ATP-binding/permease protein SAS1788 >gi|81827988|sp|Q6GFJ1.1|Y1956_STAAR RecName: Full=Putative multidrug export ATP-binding/permease protein SAR1956 >gi|81832388|sp|Q7A0J1.1|Y1806_STAAW RecName: Full=Putative multidrug export ATP-binding/permease protein MW1806 >gi|81832479|sp|Q7A4T3.1|Y1683_STAAN RecName: Full=Putative multidrug export ATP-binding/permease protein SA1683 >gi|81855910|sp|Q99T13.1|Y1866_STAAM RecName: Full=Putative multidrug export ATP-binding/permease protein SAV1866 >gi|81859551|sp|Q5HEQ8.1|Y1924_STAAC RecName: Full=Putative multidrug export ATP-binding/permease protein SACOL1924 >gi|121957842|sp|Q2FFM9.1|Y1847_STAA3 RecName: Full=Putative multidrug export ATP-binding/permease protein SAUSA300_1847 >gi|121957846|sp|Q2G2M9.1|Y2003_STAA8 RecName: Full=Putative multidrug export ATP-binding/permease protein SAOUHSC_02003) HSP 1 Score: 343.199 bits (879), Expect = 2.983e-110 Identity = 187/545 (34.31%), Postives = 314/545 (57.61%), Query Frame = 0 Query: 3 GSVVIFPSIAEHILDIIIPAKNANGD---FYMWIALALGAFF---LKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAY-DPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADL 540 G ++ P + ++ +D +I D ++ IA+ + F ++ + +R L +++DIR LY +Q L R++ + G +++RV+ DV + ++ G+ + I I +M+ + ++ L A PF L +++ R + + + +++ LH+ + GI +K++A E +E NF++ + T L+ +W A +++ + +G ++V+G G + G +T G L F L L + P+ +L S A+ DRVF+++D + + G + + QG ++ V+F Y D + PILKDI+L + G+T+A G +G GKST++NL+ RFY+ G I IDG + SLR IG V Q+ LF+ TV+EN++L A+DE++ +A + A A DF+ LP+ +T VGERGVKLSGG+KQRLSIAR L +PPIL+LDEAT+++D ++E +IQ+ALD L K+RT++++AHRLSTI +AD+I V+E G ++E GT+ EL+AK G + L Sbjct: 28 GIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHL 572
BLAST of abc transporter atp-binding protein vs. SwissProt
Match: gi|121957837|sp|Q2YU20.1|Y1799_STAAB (RecName: Full=Putative multidrug export ATP-binding/permease protein SAB1799c) HSP 1 Score: 342.043 bits (876), Expect = 1.069e-109 Identity = 186/545 (34.13%), Postives = 312/545 (57.25%), Query Frame = 0 Query: 3 GSVVIFPSIAEHILDIIIPAKNANGD---FYMWIALALGAFF---LKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAY-DPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADL 540 G ++ P + ++ +D +I D ++ IA+ + F ++ + +R L +++DIR LY +Q L R++ + G +++RV+ DV + ++ G+ + I I +M+ + ++ L A PF L +++ R + + + +++ LH+ + GI +K++A E +E NF++ + T L+ +W A +++ + +G ++V+G G + G +T G L F L L + P+ +L S A+ DRVF+++D + + G + + QG ++ V F Y D + PILKDI+L + G+T+A G +G GKST++NL+ RFY+ G I IDG + SLR IG V Q+ LF+ TV+EN++L A+DE++ + + A A DF+ LP+ +T VGERGVKLSGG+KQRLSIAR L +PPIL+LDEAT+++D ++E +IQ+ALD L K+RT++++AHRLSTI +AD+I V+E G ++E GT+ EL+AK G + L Sbjct: 28 GIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNANFLTRALKHTRWNAYSFATINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEIKQGRIDIYHVNFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEVAKVANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHL 572
BLAST of abc transporter atp-binding protein vs. SwissProt
Match: gi|226693608|sp|O31707.3|YKNU_BACSU (RecName: Full=Uncharacterized ABC transporter ATP-binding protein YknU) HSP 1 Score: 339.732 bits (870), Expect = 9.259e-109 Identity = 197/550 (35.82%), Postives = 310/550 (56.36%), Query Frame = 0 Query: 1 MAGSVVIFPSIAEHILDIIIPAKNANGDFYMWIALALGAFFLKDGL-NCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIG---AVAL-VMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSE----DEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQP-ILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADL 540 M V++P I + +D I+ + W++L A + G+ L + F ++ +R+ LY K+QRL ++D +TGD+M+R+ DV + L GL LI+ G A++L VM+ + + L +PFLA+ + + ++G R S + LN + +NI+GI +K+ + E + FN+ + R L+ W+ Y P M F+G V +L GG VM L GEL FF L++ P+ L + M ++A+ +R+ +IL+ E D P A +L G V+F V+ AY +Q L ++S +A G+ I L G TG+GKS++ LL RFY GG ITID + + + +LR +IG V QE+FLF+ T+R N+ +AS ED+ +A + A+A +F+ LP +T +GERG+ LSGG+KQR++IARA+ +P IL+LD+AT++VD QTE IQ AL E+MKNRT+ ++AHR+S++++AD I V KG++ E GT+ ELL K G + + Sbjct: 28 MTAITVVYPIILQITIDEIVLGRQY--QLAAWVSLGFIAVMVLKGMATFFHQYLGDMFGIKSVYRLRNGLYEKLQRLSFSYYDNAKTGDLMSRLTADVEGLRFFL----SYGLAELIRFGLLVAISLSVMFYYSVPLTLVTIAVLPFLAVAVYRFDKRVHPAFRGIRKSFAKLNTKVQENISGINTVKSLSREDFQISTFNKANAEYRAQYLQTSSIWSAYFPLMEFIGNTCIVALLSYGGYLVMQNQLNPGELVAFFSLVNYMMWPIMNLGFVINMFSQAKASGERLLDILEKEEDITDHPHALHKQKLT----GDVHFKNVSLAYGKEQTNALCNVSFEANSGKVIGLLGPTGSGKSSVTQLLTRFYSPVGGMITIDHKPITDYSLKTLRSNIGVVLQESFLFSSTIRSNISYGRPDASMEDVIEAAKRAQAHNFIMELPDGYDTMLGERGMGLSGGQKQRIAIARAICLNPSILILDDATSAVDMQTEHSIQLALKEVMKNRTTFIVAHRISSLKHADEILVFNKGRIRERGTHHELLEKGGYYKKI 567
BLAST of abc transporter atp-binding protein vs. SwissProt
Match: gi|81815540|sp|O31708.1|YKNV_BACSU (RecName: Full=Uncharacterized ABC transporter ATP-binding protein YknV) HSP 1 Score: 339.732 bits (870), Expect = 1.426e-108 Identity = 196/541 (36.23%), Postives = 308/541 (56.93%), Query Frame = 0 Query: 2 AGSVVIFPSIAEHILDIIIPAKNANGDFYMWIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWE--VALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADL 540 A +VI I ++LD I +N+ I + G + L N LRI N Q VI+D+R L+ +QRL R+FD R G I+ R++ D+ +++ + G+ L L+ + V ++++ + E +A+ TLPI F + R ++ R S LN+ L+++I GIR +A+ E + F+ ++ + + A++ P + +G +++ G +M+ +T G F L +F++P+S+L Q+ L A+++R+FE LD + + + G ++F +V F+YD + L +S G T+AL G TG+GK+TI NL+ RFY+ GG+I IDG + L+ SLR I V Q+ F+F+GT+ EN+ NASDE++ KA +A A +F+ L + T V ERG LS G++Q +S ARALL DP I++LDEATAS+D +TE+ IQQAL L+K RT+++IAHRLSTI++ADRI VL+ G+ IEEG +D+LLAK G +A L Sbjct: 57 AVKLVIPILIGVYVLDQAITGRNSE-LLIQLIFIISGLYVLNYAANVLRIRWMNQLGQHVIYDLRQHLFTHVQRLSHRFFDQRSAGSILVRIMNDINSLQELFTSGVINLLTDLLLLAGVIIILFTLSPELTIAIMVTLPIMFFISTSL--RKKIRRSWQTVRLKQSKLNSHLNESIQGIRVTQAFTQEEENMAYFDGVNQENYESWREATRKNAMFRPLVEMTNAIGTAVLIWYGATLIMNETITIGVFVSFAFYLGMFWEPISRLGQVYNQLLMGMASSERIFEFLDEQPNVKEKPNAIHNEKINGEISFEEVEFSYDEKRKALHAVSFSIPAGSTLALVGHTGSGKTTIANLISRFYDAAGGTIKIDGIPIKDLSLASLRSQISIVLQDTFIFSGTIMENIRFGRPNASDEEVMKASQAVGADEFISDLAEGYATEVEERGSVLSAGQRQLISFARALLADPAIIILDEATASIDTETEVKIQQALKTLLKGRTAVMIAHRLSTIRDADRIIVLDHGRKIEEGNHDQLLAKGGIYAGL 594
BLAST of abc transporter atp-binding protein vs. SwissProt
Match: gi|7388395|sp|Q9WYC4.1|Y288_THEMA (RecName: Full=Uncharacterized ABC transporter ATP-binding protein TM_0288) HSP 1 Score: 335.88 bits (860), Expect = 3.676e-107 Identity = 186/485 (38.35%), Postives = 291/485 (60.00%), Query Frame = 0 Query: 59 QSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKL-HQLN--QMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADL 540 Q V+F +R +L+ K+QR+P+ +FD GDI++RV+ DV + VL + I ++ + ++M+ N ++L +P L I S R + + LN ++ ++I+G+ IK + E E F+R++ LR + + V P M+ + +G+ L+ G GG + +T G + F F P+++L +Q N QMAL A+A+R+FEILD E+E D D L + V+G + F V F+YD +P+LKDI+ KPGQ +AL G TG+GK+TIVNLL RFY+ G I +DG ++ + + SLR SIG V Q+ LF+ TV+ENL + A+DE++ +A + + F++ LP+ ET + + G LS G++Q L+I RA L +P IL+LDEAT++VD +TE IQ A+ +LM+ +TSI+IAHRL+TI+NAD I VL G+++E G +DEL+ K G + +L Sbjct: 106 QDVVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMAL---ASAERIFEILDLEEEKDDPDAVEL-REVRGEIEFKNVWFSYDKKKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQKRGFYYEL 586
BLAST of abc transporter atp-binding protein vs. SwissProt
Match: gi|221222997|sp|P71082.2|YGAD_BACSU (RecName: Full=Putative multidrug export ATP-binding/permease protein YgaD) HSP 1 Score: 332.798 bits (852), Expect = 3.462e-106 Identity = 187/542 (34.50%), Postives = 310/542 (57.20%), Query Frame = 0 Query: 9 PSIAEHILDIII----PAKNANGDFYMWIALALGAFF-LKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSE----DEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQP-ILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADL 540 P + ++++D II A + + +A+ F L+ + R V++DIR+ L+ IQ+L LR++ RTG++++RV+ DV + +I G+ + ++ I V +M + ++ L + + P + + R + + + + + LH+ I G+ I+++A E E FN +G +R W A ++ + + ++V+ G V++G LT G + F + Y+PV +L + S A+ DRVFE +D D+P+A A ++G V F V+F Y+ D+ IL D+SL G+T+AL G +G GKST+V+L+ RFY+ G + IDG ++ SLR +G V Q+ FLF+ T+REN+ + +A+ E++ +A +AA A +F+ + P+ ET VGERGVKLSGG+KQR+SIAR LK+PP+L+LDEAT+++D ++E IQ+A+D+L K+RT+ V+AHRLSTI +AD+I V+E G +IE GT+DEL+ + Q+ L Sbjct: 36 PLLLKYVVDDIIQGGGTASDKTTSLFTIMAIMFALFLILRPPVEYYRQYFAQWTASKVLYDIRAKLFDHIQKLSLRFYANTRTGEVISRVINDVEQTKDFVITGLMNIWLDMLTILIVISIMLTLDVKLTLISIVLFPLYGISVKYFYGRLRKLTRERSQALAQVQGHLHERIQGMPVIRSFAIEDHEQAQFNEKNGHFLDKAIRHTNWNAKTFAVVNTITDLAPLIVIACAGYFVINGPLTVGTMVAFVGYIDRMYNPVRRLINSSTTLTQSIASMDRVFEFIDEPYELTDKPNAIK----ADQIRGGVEFQNVSFQYEKDKENILHDVSLKVNRGETVALVGMSGGGKSTLVSLIPRFYDVTSGRLLIDGTDIRDYEARSLRNQVGMVLQDTFLFSETIRENIAIGKPDATLEEIIEAAKAANAHEFIMSFPEGYETRVGERGVKLSGGQKQRISIARVFLKNPPLLILDEATSALDLESEHYIQEAMDKLAKDRTTFVVAHRLSTITHADKIVVMENGTIIEIGTHDELMDYESQYKHL 573
BLAST of abc transporter atp-binding protein vs. SwissProt
Match: gi|1176951|sp|P45861.1|YWJA_BACSU (RecName: Full=Uncharacterized ABC transporter ATP-binding protein YwjA) HSP 1 Score: 329.331 bits (843), Expect = 7.891e-105 Identity = 189/540 (35.00%), Postives = 301/540 (55.74%), Query Frame = 0 Query: 8 FPSIAEHILDIIIPAKNANGDFYMWIALALGAFF---LKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSE----DEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADL 540 FP I + +D ++P + D+ + IA ++G F L L + + ++ D+R L+ +Q+L +++D +TG +M+++ D+ + V G E ++++ I VM NW++AL + +P + A ++ + D +A + +NI GIR ++A+ EA E F + R R T L K A L + VL G V+ G L+ GE F LL ++ + P+ K++ + +M A E++++E D PD+ D + L +G + + V+F YD +L DI+L + G+T+A G +GAGKST+ +LL RFYE G ITIDG + + SLR IG V Q+ FLF+GT+REN+ AS+ED+W+A++ A + V +P L+T +GERGVKLSGG+KQRLSIAR LK+P IL+LDEAT+++D +TE IQ+AL EL + RT++VIAHRL+TI++ADRI V+ + E+G + +L+ G ++ L Sbjct: 33 FPLIVNYFIDTLLPGR----DWGLIIATSIGLFAVYALSSALQYIVTYWGHMLGINIETDMRKSLFDHLQKLSFKFYDNNKTGTLMSKLTNDLMYIGEVAHHGPEDLFIAVMTILGAFGVMLFINWQLALLTFIIMPIVIWLALYFNKKMTKAFTTLNKDIGDFSARVENNIGGIRLVQAFGNEAFEKERFAVNNQRFRVTKLSSYKIMAKNGSISYMLTRFVTLFVLLCGTWFVIRGSLSYGEFVAFVLLTNVLFRPIDKINAIIEMYPRGIAGFKSYMELMETEPDIQDSPDSKDVSGL----KGNIRYKHVSFGYDDHHNVLNDINLSIQAGETVAFVGPSGAGKSTLCSLLPRFYEASEGDITIDGISIKDMTLSSLRGQIGVVQQDVFLFSGTLRENIAYGRLGASEEDIWQAVKQAHLEELVHNMPDGLDTMIGERGVKLSGGQKQRLSIARMFLKNPSILILDEATSALDTETEAAIQKALQELSEGRTTLVIAHRLATIKDADRIVVVTNNGIEEQGRHQDLIEAGGLYSRL 564
BLAST of abc transporter atp-binding protein vs. SwissProt
Match: gi|122064507|sp|Q3J7R8.1|MSBA_NITOC (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 322.783 bits (826), Expect = 3.705e-102 Identity = 184/510 (36.08%), Postives = 299/510 (58.63%), Query Frame = 0 Query: 35 LALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLV--SLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQ-PILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLAD-RNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADL 540 L +G F ++ G N + + V+ D+R ++ + LP R++D + +G ++ +++ DV + D I L ++ SL +G +A + YL N + L + P +AL + SH R + ++S D++ + + I G R++K + + E F++++ + R T+++ A+ P + + ++G V+ M ++ G F + L PV +L ++N AAA +F +L + P+A G + + +GA+ F ++F Y+P + P+L++I L+ KP QTIAL G +G+GKST+V+LL RFYE G I ID ++ TL LR I V+Q+ LFN T+ N+ + S +D+ +A EAA A +F+ LP L+T +GE+GV LSGG++QRL+IARALLKD PIL+LDEATAS+D + E IQ AL+ LM+ RT++VIAHRLST++NAD+I VL +GQ+IE GT+ +LLA++ +A L Sbjct: 71 LLIGLFVIRGGANFITQYGLKWVARRVVRDLREQMFCHLLALPARYYDQKASGQLLAKLIYDVEQVSNAATDAI-LTIIRDSLTILGLLAWMAYL-NGLLTLIILVTAPLIALIIWWVSHRFRRISRKIQNSMGDVSQVAQETIEGHREVKIFGGQTYEAERFDQVNEQNRRQTMKMAATDAISQPVVQLIAVLGLAGVIHLATRESMLAQISVGTFISFITAMMLLLGPVKRLTKINGTLQRGIAAAQSIFGLL--AETPEADRGQQSLRRARGAIRFEHLSFCYEPAKGPVLENIDLEIKPYQTIALVGHSGSGKSTLVSLLARFYETTSGRILIDEMDIQTLRLTELRRQIALVSQQIILFNDTIAHNIAYGSYQQTSKQDIIRAAEAAHAMEFINRLPDGLDTVIGEKGVLLSGGQRQRLAIARALLKDAPILILDEATASLDTEAERHIQAALETLMRQRTTLVIAHRLSTVENADQIIVLHQGQIIERGTHSQLLARESHYAGL 576
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1200391806|gb|OUV09936.1| (ABC transporter ATP-binding protein [Verrucomicrobiaceae bacterium TMED86]) HSP 1 Score: 854.744 bits (2207), Expect = 0.000e+0 Identity = 429/546 (78.57%), Postives = 478/546 (87.55%), Query Frame = 0 Query: 1 MAGSVVIFPSIAEHILDIIIPAKNANGDFYM-WIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADLANTIK 545 MAGSV+IFP + HI IIP N D +M W+ L LG+FFLKD LNC RI+LNNHFEQ VI+DIRSDLY+KIQRLPLRWFDTRRTGD+MTRVVEDVTAMER+LIDGIELGL+S+IQI AV + MY N VA WATLP+PFL LGA+IY+ DARDRYK QR+SASDLNALLHDNIAGIRQIKAYAAE +EH++FNRLS +R TLR+MKWWA YSP MSFL M+GYVLVLG GG AVM G++ +L FFLLLSLFY+PVSKLHQLNQMALSSRAAADRVFEILDS+DEP+A+ G LA+PV G V F V+FAYD DQP L ++SL A GQTIALAGSTGAGKSTIVNLLCRFYEY GSI+IDG+ELNTLAK+SLR SIGYVTQEAFLFNGTVRENL LADRNAS++DLW+ALEAARAADFVR LP+QLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIV+AHRLSTIQNAD+IYVL KG++IEEGTY+ELL DG FA+LA++IK Sbjct: 13 MAGSVIIFPLVTRHITGEIIP--NKQFDLFMPWVLLGLGSFFLKDALNCARIILNNHFEQRVIYDIRSDLYQKIQRLPLRWFDTRRTGDVMTRVVEDVTAMERILIDGIELGLISVIQILAVGITMYWMNASVAAWATLPVPFLVLGAWIYTRDARDRYKQQRESASDLNALLHDNIAGIRQIKAYAAEKEEHLHFNRLSNAMRRATLRVMKWWAFYSPGMSFLNMIGYVLVLGFGGYAVMTGEMKLPDLLAFFLLLSLFYEPVSKLHQLNQMALSSRAAADRVFEILDSKDEPEAASGASLAQPVTGDVVFDDVSFAYDEDQPTLHNVSLQATRGQTIALAGSTGAGKSTIVNLLCRFYEYDSGSISIDGQELNTLAKNSLRASIGYVTQEAFLFNGTVRENLALADRNASNDDLWRALEAARAADFVRELPEQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVVAHRLSTIQNADKIYVLGKGRLIEEGTYEELLENDGPFAELASSIK 556
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|740295959|ref|WP_038134072.1| (MULTISPECIES: ABC transporter ATP-binding protein [unclassified Verrucomicrobia (miscellaneous)]) HSP 1 Score: 827.395 bits (2136), Expect = 0.000e+0 Identity = 416/545 (76.33%), Postives = 473/545 (86.79%), Query Frame = 0 Query: 1 MAGSVVIFPSIAEHILDIIIPAKNANGDFYMWIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADLANTIK 545 MA SV++FP + +HI IIP + + F W+ + L +FF+KD LNC RI+LNNHFEQ VIFDIRSDLYRKIQRLPLRWFD+RRTGDIMTRVVEDVTAMER+LIDGIELGL+S+IQI AV + MY + VALWATLPIPFLA+GA+IY+ AR RYK QRD++SDLNA+LHDNIAGIRQIKAYAAE DEH +FN LSG LR TLR+MKWWA Y+PSMSF GYVLVLG GG AVM G + EL FFLLLSLFY+PVSKLHQLNQMALSSRAAADRVFEILDS+DEPDA+ G L +PV+GAV F+ V+F+YD QP L ++SL A+PGQTIALAGSTGAGKSTIVNLLCRFYEY GS+ IDG+ELNTLAK SLR++IGYVTQEAFLFNGTVRENL LADR+A+D+ +WKALEAA+A +FVRALP+QL+TNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVL+KG+VIE+G YD L+ + G+FA+LANTIK Sbjct: 28 MAASVIVFPLVTKHITGEIIPNRQFDV-FLPWVLVGLLSFFIKDALNCARIILNNHFEQRVIFDIRSDLYRKIQRLPLRWFDSRRTGDIMTRVVEDVTAMERILIDGIELGLISIIQILAVGITMYWLDPTVALWATLPIPFLAMGAWIYTRKARGRYKAQRDASSDLNAVLHDNIAGIRQIKAYAAEKDEHEHFNGLSGALRKATLRIMKWWAFYNPSMSFFNSTGYVLVLGFGGYAVMQGTMQFDELLTFFLLLSLFYEPVSKLHQLNQMALSSRAAADRVFEILDSDDEPDAASGDPLPRPVRGAVEFNNVSFSYDKGQPTLDEVSLIAEPGQTIALAGSTGAGKSTIVNLLCRFYEYDNGSVLIDGKELNTLAKGSLRDAIGYVTQEAFLFNGTVRENLSLADRHANDDAIWKALEAAKAGEFVRALPEQLDTNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLQKGRVIEKGPYDVLINQGGKFAELANTIK 571
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|754477333|ref|WP_041894603.1| (ABC transporter ATP-binding protein [Verrucomicrobia bacterium SCGC AAA164-L15]) HSP 1 Score: 825.469 bits (2131), Expect = 0.000e+0 Identity = 415/545 (76.15%), Postives = 472/545 (86.61%), Query Frame = 0 Query: 1 MAGSVVIFPSIAEHILDIIIPAKNANGDFYMWIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADLANTIK 545 MA SV++FP + +HI IIP + + F W+ + L +FF+KD LNC RI+LNNHFEQ VIFDIRSDLYRKIQRLPLRWFD+RRTGDIMTRVVEDVTAMER+LIDGIELGL+S+IQI AV + MY + VALWATLPIPFLA+GA+IY+ AR RYK QRD++SDLNA+LHDNIAGIRQIKAYAAE DEH +FN LSG LR TLR+MKWWA Y+PSMSF GYVLVLG GG AVM G + EL FFLLLSLFY+PVSKLHQLNQMALSSRAAADRVFEILDS+DEPDA+ G L +PV+GAV F+ V+F+YD QP L ++SL A+PGQTIALAGSTGAGKSTIVNLLCRFYEY GS+ IDG+ELNTLAK SLR++IGYVTQEAFLFNGTVRENL LADR+A+D+ +WKALEAA+A +FVRALP+QL+TNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELM NRTSIVIAHRLSTIQNADRIYVL+KG+VIE+G YD L+ + G+FA+LANTIK Sbjct: 28 MAASVIVFPLVTKHITGEIIPNRQFDV-FLPWVLVGLLSFFIKDALNCARIILNNHFEQRVIFDIRSDLYRKIQRLPLRWFDSRRTGDIMTRVVEDVTAMERILIDGIELGLISIIQILAVGITMYWLDPTVALWATLPIPFLAMGAWIYTRKARGRYKAQRDASSDLNAVLHDNIAGIRQIKAYAAEKDEHEHFNGLSGALRKATLRIMKWWAFYNPSMSFFNSTGYVLVLGFGGYAVMQGTMQFDELLTFFLLLSLFYEPVSKLHQLNQMALSSRAAADRVFEILDSDDEPDAASGDPLPRPVRGAVEFNNVSFSYDKGQPTLDEVSLIAEPGQTIALAGSTGAGKSTIVNLLCRFYEYDNGSVLIDGKELNTLAKGSLRDAIGYVTQEAFLFNGTVRENLSLADRHANDDAIWKALEAAKAGEFVRALPEQLDTNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMNNRTSIVIAHRLSTIQNADRIYVLQKGRVIEKGPYDVLINQGGKFAELANTIK 571
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1200265812|gb|OUT88706.1| (ABC transporter ATP-binding protein [Roseibacillus sp. TMED18]) HSP 1 Score: 753.436 bits (1944), Expect = 0.000e+0 Identity = 378/541 (69.87%), Postives = 443/541 (81.89%), Query Frame = 0 Query: 1 MAGSVVIFPSIAEHILDIIIPAKNANGDFYMWIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADLA 541 MA SVV+FPSI +++D I+P + + W+ L L FFLKD LNC RI+LNNHFEQ VIFDIRSDLY+K+QRLPLRWFD RRTGDIMTRVVEDVTAMERVLIDGIELGLV++IQ+ AV VMY T+ VALWATLP+PFL +GA+IY+ +ARDRY+GQRD+ASD+N+LLHDN++GI QIK Y AE EH FN S +LR +LR+M+WWA YSP MSF+GMVGY LVLG G AVM G + GEL FFLLLSLFY+PVSKLHQLNQMALSSRAAADRVFEILDSEDEP + G L KPV G V V+F+Y +QP L+DI+L A+PG+TIAL G TGAGKSTIVNLLCRFYEY GSITIDG+ELN K SLR ++GYVTQEAFLFNGTVRENL+LA A + DLWKALE+ARA R LP L+TNVGERGVKLSGGEKQRLSIARALLKDPP+LLLDEATASVD++TE LIQ+AL+ LM +R++ VIAHRLSTI+NADRIYVL+ G V+E+GT++ELL DG +A+L+ Sbjct: 28 MALSVVVFPSITGYVVDEILPXPARHHELLFWVFLGLMGFFLKDALNCARIILNNHFEQRVIFDIRSDLYQKLQRLPLRWFDGRRTGDIMTRVVEDVTAMERVLIDGIELGLVAMIQLLAVGAVMYYTDVTVALWATLPVPFLMIGAWIYTRNARDRYRGQRDAASDMNSLLHDNVSGISQIKTYTAEDREHERFNAFSDKLRQASLRIMRWWAFYSPGMSFVGMVGYALVLGFGSQAVMSGRMDLGELVLFFLLLSLFYEPVSKLHQLNQMALSSRAAADRVFEILDSEDEPHSEAGGALTKPVLGDVKLESVSFSYG-EQPTLRDITLHARPGETIALVGPTGAGKSTIVNLLCRFYEYDSGSITIDGQELNQTCKSSLRSALGYVTQEAFLFNGTVRENLLLAKPEADEADLWKALESARADSLTRELPDGLDTNVGERGVKLSGGEKQRLSIARALLKDPPVLLLDEATASVDSETERLIQEALEALMADRSAFVIAHRLSTIRNADRIYVLDGGTVVEQGTHEELLKADGLYAELS 567
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1240605650|gb|PAW60232.1| (ABC transporter ATP-binding protein [Verrucomicrobiae bacterium Tous-C3TDCM] >gi|1241362765|gb|PAZ06419.1| ABC transporter ATP-binding protein [Verrucomicrobiae bacterium AMD-G2]) HSP 1 Score: 724.161 bits (1868), Expect = 0.000e+0 Identity = 353/541 (65.25%), Postives = 434/541 (80.22%), Query Frame = 0 Query: 1 MAGSVVIFPSIAEHILDIIIPAKNANGDFYMWIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADLA 541 M + +FP+ H++D IIP + +F WIALA F LKDGLN LRI++NN FEQ VIFDIRSDLY KIQ LPL+WFDTRRTGD+MTRVVEDVT MERVLIDGIE GLV+L+Q+ V + +++ N VALWATLP+P LA+GA+ YS RDRYK QR+++SDLNALLHDNI+GIRQIKAYAAE +E FNR S LR LR+MKWWA+YSP MS L M GYVLVL GG AVM+G L+ G F L LSLFY+P+ +L+ LNQM LS RAAADRVFEI+D++DE +A+ G L ++G V F V+F+Y +QP L++I+L+AKPGQT+AL G TGAGK+TI++LL RFYE G IT+D EL++L+K SLR+ +GYVTQEAFLFNGTVRENL LA R+ASDE++W ALEAA A+ FV+ LP++L+TNVGERGVKLSGGEKQRLSIAR+LLK+ PILLLDEATASVD++TE LIQ ALD LMKNRTS VIAHRLSTIQNAD I+VL+ G+VIE+GT++ELLA++G++A+L Sbjct: 1 MTLATFVFPNATRHVIDNIIPHPQRHTEFGYWIALAFVGFLLKDGLNSLRIMVNNTFEQKVIFDIRSDLYEKIQHLPLQWFDTRRTGDVMTRVVEDVTNMERVLIDGIEQGLVALLQVLGVGVFLFILNPTVALWATLPVPLLAVGAWFYSTKGRDRYKNQREASSDLNALLHDNISGIRQIKAYAAEREELARFNRFSDILRRANLRMMKWWALYSPGMSLLRMTGYVLVLAFGGRAVMEGTLSLGSFTGFLLFLSLFYEPIDRLNSLNQMILSGRAAADRVFEIMDTDDEVNANSGAELPANLRGHVRFENVSFSYQ-NQPTLENITLEAKPGQTVALVGPTGAGKTTILSLLARFYETTSGRITMDDIELSSLSKASLRDRMGYVTQEAFLFNGTVRENLQLAKRDASDEEMWNALEAAHASPFVKELPQRLDTNVGERGVKLSGGEKQRLSIARSLLKNAPILLLDEATASVDSETERLIQSALDHLMKNRTSFVIAHRLSTIQNADVIFVLDAGKVIEQGTHNELLAQNGKYAELC 540
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1175338408|ref|WP_081886200.1| (ABC transporter ATP-binding protein [Haloferula sp. BvORR071]) HSP 1 Score: 718.383 bits (1853), Expect = 0.000e+0 Identity = 356/541 (65.80%), Postives = 431/541 (79.67%), Query Frame = 0 Query: 1 MAGSVVIFPSIAEHILDIIIPAKNANGDFYMWIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADLA 541 M +V +FP+ + +LD IIP +G+F W+ ++L F LKDGLN LRI +NN FEQ VI+DIR DLY KIQ+LPLRWFDTRRTGD+MTRVVEDVT MERVLIDGIE GLV+ +Q+ V + ++ N VA ATLP+P LALGA+IYS RDRY+ QRD++SDLNA+LHDNI+GIRQIKAYAAE E FNR S LR TLR+MKWWA+YSP MSF+ M GYVLVL GG AVM GDL+ G+ F F+L LSLFY+P+ +L+ LNQM LS RAAADRVFEILDSE EP+A++G L ++ V F V+FAY +QP L ++ L+AKPGQT+AL GSTGAGKST+++LL RFYE G+ITIDG ++ TL+K SLR+ +GYVTQE FLFNGTVRENL LA R ASD ++W AL+AA A FVRALP+QL+TNVGERGVKLSGGEKQRLSIARALLK+ PILLLDEATASVD++TE IQ ALD LM+NRT+ VIAHRLSTI+NAD IYVLEKG+VIE+GT++EL AK G++A+L Sbjct: 1 MTLAVFVFPNASRIVLDDIIPNPARHGEFTFWVVISLLGFLLKDGLNSLRIFVNNTFEQKVIYDIREDLYSKIQQLPLRWFDTRRTGDVMTRVVEDVTNMERVLIDGIEQGLVAALQVIGVGIFLFYMNPTVACAATLPVPLLALGAWIYSTRGRDRYRNQRDASSDLNAILHDNISGIRQIKAYAAEGPELDRFNRYSEALRRVTLRMMKWWAIYSPLMSFVRMSGYVLVLFFGGSAVMSGDLSIGKFFAFYLSLSLFYEPIDRLNGLNQMILSGRAAADRVFEILDSEVEPNATEGAELPAQIRAHVRFDGVSFAYG-EQPTLHEVDLEAKPGQTVALVGSTGAGKSTVLSLLTRFYERDSGAITIDGIDIATLSKQSLRDHLGYVTQEPFLFNGTVRENLALAKREASDAEMWSALDAAHADKFVRALPQQLDTNVGERGVKLSGGEKQRLSIARALLKNAPILLLDEATASVDSETERQIQDALDHLMQNRTAFVIAHRLSTIRNADIIYVLEKGRVIEQGTHEELWAKGGKYAELC 540
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1110140520|emb|SHJ69289.1| (ATP-binding cassette, subfamily B, MsbA [Rubritalea squalenifaciens DSM 18772]) HSP 1 Score: 659.833 bits (1701), Expect = 0.000e+0 Identity = 319/520 (61.35%), Postives = 410/520 (78.85%), Query Frame = 0 Query: 23 KNANGDFYMWIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELF-KFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADLA 541 KN+ + ++ +AL AFF +D NCLRIL+NN FEQ IFD+RS+LY K+QRLPL+WFD++RTGDIMTRV ED+ AMER+LIDG+E GL++++QI ++ + + + A PIPFLA+GA+IY+ +AR+RY+ + D+NALL DNI+G+RQIK+YAAE DEH FN+LS ++R TL++MK+WAVYSP+MSF+ GYVLVLG GG ++ E++ FF ++ Y+P+ +LH LNQMALSS+AAA+RVFEILD++DE A +G L +P+ G V F V F+Y+ D+P L DI+ AKPGQTIAL GSTGAGKST+VNLL RFYEY GSITIDG ELNTL K SLR SI YVTQ++FLFNGTVRENL+L R+A+DE+LW+AL+AA A+ FV+ LP+ L+TNVGERGVKLSGGEKQRLSIARALLK+ PIL+LDEATASVD++TE LIQ ALD LM RT+ VIAHRLSTIQNAD I+VL++G +IE GT+ ELLAK+G++A L+ Sbjct: 97 KNSTSELIIYTLIALAAFFGRDLFNCLRILINNVFEQKAIFDLRSELYSKLQRLPLKWFDSKRTGDIMTRVAEDIPAMERLLIDGVEQGLIAILQIVGISAFLIWKDPILGFTALAPIPFLAIGAWIYTKNARERYRDLKRFTGDMNALLSDNISGVRQIKSYAAEEDEHKRFNKLSNKVRQATLKVMKYWAVYSPTMSFVNSCGYVLVLGVGGYRIITDPAVGTEIYLYFFTIMWALYEPIGRLHGLNQMALSSKAAAERVFEILDTDDELHADEGKMLPQPLNGEVIFKNVNFSYE-DEPTLHDITFTAKPGQTIALVGSTGAGKSTLVNLLTRFYEYDDGSITIDGRELNTLNKPSLRSSIAYVTQDSFLFNGTVRENLILGKRDATDEELWRALDAANASPFVKELPELLDTNVGERGVKLSGGEKQRLSIARALLKNQPILILDEATASVDSKTEKLIQDALDNLMHTRTAFVIAHRLSTIQNADVIHVLDRGHIIESGTHAELLAKNGKYAALS 615
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1200369821|gb|OUU88858.1| (ABC transporter ATP-binding protein [Verrucomicrobiaceae bacterium TMED76]) HSP 1 Score: 649.047 bits (1673), Expect = 0.000e+0 Identity = 317/538 (58.92%), Postives = 411/538 (76.39%), Query Frame = 0 Query: 6 VIFPSIAEHILDIIIPAKNANGDFYMWIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADLANT 543 ++FP+IA +LD +P K + + LA A+F +D LN LRI+LNN FEQ VI+DIRSDLY K+QRLPL+WFD R TGDIMTRV EDVT+MERVLIDGIE GLV+L+QI AV+LVM+ N +A WA +P+PFL +GA IY+ RDRY+ R + S++NALLHDNI+GIRQIKAY EA E FN S ++R TLR M WA+Y+PSMSF+G +G++LV+G GG + G ++ GE+ F L L+LFY+PVS+LHQLNQM S RAAA+RVF+ILDS DEP DG +L PV G V + V F Y + ++L+A+PGQTIAL G TGAGK+T++NLL RFYE+ G I ID E+ ++K+SLR +IGYVTQE+FLFNGTV+ENL+LA+R+AS++ +W +L+ A A DF++ LP+ L+T VGERGVKLS GEKQR+SIARALL++PPILLLDEATASVD +TE LIQQAL+ LMK+RTS VIAHRLST++ AD IYV++ G+V+E GT+++LL+ G +A+L T Sbjct: 33 IVFPNIARLVLDEAVPQKREDL-LISYTLLACLAYFGRDLLNSLRIMLNNTFEQKVIYDIRSDLYEKLQRLPLKWFDNRPTGDIMTRVAEDVTSMERVLIDGIEQGLVALLQIVAVSLVMFWINPTLAAWAVVPVPFLFIGAMIYT-STRDRYRTVRKATSEMNALLHDNISGIRQIKAYTMEASELKRFNAASDKVRKATLRTMFAWAIYNPSMSFIGGIGFILVIGFGGNLALQGQISPGEITAFLLYLTLFYEPVSRLHQLNQMLQSGRAAAERVFDILDSVDEPGLDDGVKLKVPVNGKVEYRDVEFNYAEGIQTINGVNLNAEPGQTIALVGPTGAGKTTVINLLTRFYEHGSGDILIDEVEVKKISKESLRSAIGYVTQESFLFNGTVKENLLLANRDASEDQMWDSLKVANAYDFIKCLPEGLDTQVGERGVKLSVGEKQRVSIARALLRNPPILLLDEATASVDTETERLIQQALERLMKDRTSFVIAHRLSTVRGADNIYVMDNGKVVESGTHEDLLSMSGLYAELCRT 568
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1353605866|ref|WP_105043411.1| (ABC transporter ATP-binding protein [Rubritalea profundi] >gi|1350982838|gb|PQJ28920.1| ABC transporter ATP-binding protein [Rubritalea profundi]) HSP 1 Score: 640.188 bits (1650), Expect = 0.000e+0 Identity = 309/512 (60.35%), Postives = 406/512 (79.30%), Query Frame = 0 Query: 31 MWIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELF-KFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADLA 541 ++ +AL AFF +D NCLRI +NN FEQ IFD+RS+LY K+QRLPL+WFD++RTGDIMTRV ED+ AMER+LIDG+E GL++++QI V+ + + + A P+P LA+GA IY+ +ARDR++ + ++NALL DNIAG+ QIK+YAAEADE FN+LS +++ TTL++MK+WA+YSPSMSF+ +GYVLVLG GG ++ E++ FF ++ Y+P+SKLH LNQMALSS+AAA+RVFEILD++DE A DG L +PV+G V F +V+F+YD + P L +ISL A PGQTIAL GSTGAGKST+VNLL RFYEY GSITIDG ELNTL K SLR +I YVTQ++FLFNG+VRENL+L R+A+DE+LW+AL+AA A+ F++ LP L+TNVGERGVKLSGGEKQR+SIARALLK+ PIL+LDEATASVD++TE LIQ ALD LM RT+ VIAHRLSTI+NAD I+VL++G++IE GT+ L+ ++G++A+L+ Sbjct: 100 LYTCIALAAFFGRDLFNCLRIFINNVFEQKAIFDLRSELYSKLQRLPLKWFDSKRTGDIMTRVAEDIPAMERLLIDGVEQGLIAVLQIIGVSAFLIWKDPVLGFTALAPLPLLAIGATIYTRNARDRHRDVKKYTGEMNALLSDNIAGVNQIKSYAAEADELKRFNKLSNKVQHTTLKVMKYWALYSPSMSFVNSLGYVLVLGVGGYRIITDPSVGTEIYLYFFTIMWALYEPISKLHGLNQMALSSKAAAERVFEILDTDDEIHADDGEILPQPVRGEVCFDQVSFSYD-EIPTLHNISLKAMPGQTIALVGSTGAGKSTLVNLLTRFYEYDSGSITIDGYELNTLNKPSLRSNIAYVTQDSFLFNGSVRENLLLGKRDATDEELWRALDAANASQFIKELPSHLDTNVGERGVKLSGGEKQRVSIARALLKNQPILILDEATASVDSKTEKLIQDALDNLMNTRTAFVIAHRLSTIKNADIIHVLDRGRIIESGTHASLIQQNGKYAELS 610
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1154910214|ref|WP_078816063.1| (ABC transporter ATP-binding protein [Prosthecobacter debontii] >gi|1152225368|emb|SKB08397.1| ATP-binding cassette, subfamily B [Prosthecobacter debontii]) HSP 1 Score: 614.764 bits (1584), Expect = 0.000e+0 Identity = 307/539 (56.96%), Postives = 392/539 (72.73%), Query Frame = 0 Query: 5 VVIFPSIAEHILDIIIPAKNANGDFYMWIALALGAFFLKDGLNCLRILLNNHFEQSVIFDIRSDLYRKIQRLPLRWFDTRRTGDIMTRVVEDVTAMERVLIDGIELGLVSLIQIGAVALVMYLTNWEVALWATLPIPFLALGAFIYSHDARDRYKGQRDSASDLNALLHDNIAGIRQIKAYAAEADEHVNFNRLSGRLRTTTLRLMKWWAVYSPSMSFLGMVGYVLVLGTGGMAVMDGDLTRGELFKFFLLLSLFYDPVSKLHQLNQMALSSRAAADRVFEILDSEDEPDASDGTRLAKPVQGAVNFSKVTFAYDPDQPILKDISLDAKPGQTIALAGSTGAGKSTIVNLLCRFYEYHGGSITIDGEELNTLAKDSLRESIGYVTQEAFLFNGTVRENLVLADRNASDEDLWKALEAARAADFVRALPKQLETNVGERGVKLSGGEKQRLSIARALLKDPPILLLDEATASVDNQTELLIQQALDELMKNRTSIVIAHRLSTIQNADRIYVLEKGQVIEEGTYDELLAKDGQFADLANT 543 VV+FP++ +LD+++P + + +A GA+F + N LRILLNN FEQ VI+D+RSDLY ++Q LPLRWFD R TGDIMT V ED+ +ERVLIDGIE GLV++IQI V + M+ + +ALWA +PIPFL GA Y+ +R+R++ R ++S +N+LLHDN+AG+RQIKAYA E +EH FN S L+T TL +M+ WAVY P M FL VG VLVL G +M+G + +G+L F LLL FYDP+ +LHQLNQ+ S RAA +RVFEILD+E E D +G L K +QG V + V F+Y P + I L+AKPGQTIAL G TG GKST++NLL RFYEY G ITIDG ++ + K LR IGYVTQE+F+FNGTVRENL++ R+AS+++LWK L A A FVR L K L+T VGERGVKLS GEKQRLSIARALL++PPILLLDEATASVD +TE IQ ALD LM NRTS VIAHRLST+++AD IYVLE+G ++E+G+++EL+A DG +A L T Sbjct: 32 VVVFPAVTREVLDVVVPQGQWD-RLTPLVLMAAGAYFAQHFFNSLRILLNNTFEQKVIYDLRSDLYERLQTLPLRWFDNRPTGDIMTTVGEDIPNVERVLIDGIEQGLVAVIQIAVVGVFMFQADATLALWALVPIPFLIAGALGYTRTSRERHRAVRRASSGMNSLLHDNVAGMRQIKAYAMEREEHGRFNGASAALKTATLHVMRIWAVYRPGMHFLTSVGMVLVLWVGAKGLMEGRIEKGDLAAFLLLLKYFYDPIEQLHQLNQIIQSGRAAGERVFEILDAEPEADTGEGIVL-KDIQGHVRYENVGFSYGGKIPTVHGIHLEAKPGQTIALVGPTGTGKSTLINLLTRFYEYDEGVITIDGVPVHEMNKAWLRGRIGYVTQESFMFNGTVRENLLIGKRDASEDELWKVLADANADAFVRRLDKGLDTRVGERGVKLSVGEKQRLSIARALLRNPPILLLDEATASVDTETERQIQAALDRLMMNRTSFVIAHRLSTVRHADIIYVLERGAIVEKGSHEELVANDGLYARLCRT 568 The following BLAST results are available for this feature:
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 21
Pagesback to top
BLAST of abc transporter atp-binding protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of abc transporter atp-binding protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold2503_size14991:11792..13432+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold2503_size14991-processed-gene-0.2 ID=snap_masked-scaffold2503_size14991-processed-gene-0.2|Name=abc transporter atp-binding protein|organism=Tigriopus kingsejongensis|type=gene|length=1641bp|location=Sequence derived from alignment at scaffold2503_size14991:11792..13432+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'abc transporter atp-binding protein' has the following synonyms
Add to Basket
|