cuticle protein, snap_masked-scaffold286_size222086-processed-gene-1.5 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000000830 (supercontig:LSalAtl2s:LSalAtl2s113:3035:4183:1 gene:EMLSAG00000000830 transcript:EMLSAT00000000830 description:"augustus_masked-LSalAtl2s113-processed-gene-0.2") HSP 1 Score: 159.073 bits (401), Expect = 1.276e-51 Identity = 72/110 (65.45%), Postives = 89/110 (80.91%), Query Frame = 0
Query: 27 GESPNNQAYNLPADGETLLAQPLALSFSCDSREYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYNIVEFGKIDDA 136
+SP+ AY LPAD E +L P++ SFSC+ + YGYYADV NNCQIFHICLPIEDDAG +IET Q+SF+CGN TMFDQQTLTCNY +D+ PC++A SLY VEFG+I ++
Sbjct: 22 SQSPS--AYQLPADAELILNSPVSTSFSCEGQSYGYYADVDNNCQIFHICLPIEDDAGQIIETXQYSFVCGNTTMFDQQTLTCNYPEDAFPCNEAPSLYGAVEFGRIPES 129
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000005557 (supercontig:LSalAtl2s:LSalAtl2s29:313463:313858:1 gene:EMLSAG00000005557 transcript:EMLSAT00000005557 description:"augustus_masked-LSalAtl2s29-processed-gene-3.0") HSP 1 Score: 156.762 bits (395), Expect = 1.241e-50 Identity = 72/106 (67.92%), Postives = 88/106 (83.02%), Query Frame = 0
Query: 30 PNNQAYNLPADGETLLAQPLALSFSCDSREYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYNIVEFGKIDD 135
P +Q+Y LP + E++L P++ SFSC+ ++YGYYADV NNCQIFHICLPIEDDAG VIETA +SFICGN T+FDQQTLTCN+ D+ PC++A SLYN VEFGKI D
Sbjct: 24 PTDQSYLLPNEYESILFNPISTSFSCEGQQYGYYADVDNNCQIFHICLPIEDDAGFVIETAHFSFICGNQTIFDQQTLTCNHIDDAFPCNEAPSLYNAVEFGKIPD 129
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000000082 (supercontig:LSalAtl2s:LSalAtl2s1010:91799:92649:1 gene:EMLSAG00000000082 transcript:EMLSAT00000000082 description:"maker-LSalAtl2s1010-augustus-gene-0.12") HSP 1 Score: 152.525 bits (384), Expect = 5.491e-49 Identity = 75/128 (58.59%), Postives = 89/128 (69.53%), Query Frame = 0
Query: 6 VAIVFSACIAGYLAMPQVYPDGESPNNQAYNLPADGETLLAQPLALSFSCDSREYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYNIVEFGKI 133
+ ++ S IA L QV +SP AY P D E L P++ SF+CD + YGYYADV NNCQIFHICLPIEDDAG +IET Q+SFICGN TMFDQ TLTCN + + PC++A SLY VEFGKI
Sbjct: 2 IKLIVSTMIASLLVASQV--SSQSPT--AYQFPTDAELYLDAPVSTSFTCDGQPYGYYADVDNNCQIFHICLPIEDDAGQIIETTQYSFICGNTTMFDQNTLTCNXPEYAFPCNEAPSLYGAVEFGKI 125
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000000081 (supercontig:LSalAtl2s:LSalAtl2s1010:102531:140454:1 gene:EMLSAG00000000081 transcript:EMLSAT00000000081 description:"maker-LSalAtl2s1010-augustus-gene-0.13") HSP 1 Score: 161.384 bits (407), Expect = 7.362e-48 Identity = 77/129 (59.69%), Postives = 95/129 (73.64%), Query Frame = 0
Query: 7 AIVFSACIAGYLAMPQVYPDGESPNNQAYNLPADGETLLAQPLALSFSCDSREYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYNIVEFGKIDD 135
A+ + A QV +SP+ AY LPAD E +L P++ SFSCD + YGYYADV NNCQIFHICLPIEDDAG +IETAQ+SF+CGN TMFDQQTLTCN+ +D+ PC++A SLY VEFG+I +
Sbjct: 146 AVASTLAFAALFVATQV--SSQSPS--AYQLPADAELILDSPVSTSFSCDGQAYGYYADVDNNCQIFHICLPIEDDAGQIIETAQYSFVCGNTTMFDQQTLTCNHPEDAFPCNEAPSLYGAVEFGRIPE 270 HSP 2 Score: 160.229 bits (404), Expect = 1.732e-47 Identity = 77/129 (59.69%), Postives = 95/129 (73.64%), Query Frame = 0
Query: 7 AIVFSACIAGYLAMPQVYPDGESPNNQAYNLPADGETLLAQPLALSFSCDSREYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYNIVEFGKIDD 135
A+V + A QV +SP+ AY LPAD E LL P++ +FSCD + YG YADV NNCQIFHICLPIEDDAG +IETAQ+SF+CGN TMFDQQTLTCN+ +D+ PC++A SLY VEFG+I +
Sbjct: 286 AVVSTLAFAALFVATQV--SSQSPS--AYQLPADAEFLLDSPISTTFSCDGQSYGXYADVDNNCQIFHICLPIEDDAGQIIETAQYSFVCGNTTMFDQQTLTCNHPEDAFPCNEAPSLYGAVEFGRIPE 410 HSP 3 Score: 149.828 bits (377), Expect = 1.130e-43 Identity = 68/107 (63.55%), Postives = 83/107 (77.57%), Query Frame = 0
Query: 27 GESPNNQAYNLPADGETLLAQPLALSFSCDSREYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYNIVEFGKI 133
+SP AY LP D E +LA PL+ SF+CD + YGYYADV NNCQ+FH+CLPIED+ G +IETAQ+SFICGN T+FDQ TLTCNY ++S+ C + SLY VEFGKI
Sbjct: 22 SQSPT--AYELPTDAEAILAAPLSTSFTCDGQPYGYYADVDNNCQVFHVCLPIEDNLGQIIETAQYSFICGNTTVFDQNTLTCNYPENSIACLDSPSLYGAVEFGKI 126 HSP 4 Score: 55.0694 bits (131), Expect = 5.752e-10 Identity = 32/70 (45.71%), Postives = 43/70 (61.43%), Query Frame = 0
Query: 5 SVAIVFSACIAGYLAMPQVYPDGE--SPNNQAYNLPADGETLLAQPLALSFSCDSREYGYYADVSNNCQI 72
S++ +F A IA LA ++ + S + AY LPAD E L ++ SFSCD + YGYYADV NNCQ+
Sbjct: 433 SISKMFKA-IASXLAFAALFVAXQVSSQSPSAYQLPADAEFTLDSQVSTSFSCDGQAYGYYADVDNNCQV 501 HSP 5 Score: 50.8322 bits (120), Expect = 1.755e-8 Identity = 30/66 (45.45%), Postives = 38/66 (57.58%), Query Frame = 0
Query: 7 AIVFSACIAGYLAMPQVYPDGESPNNQAYNLPADGETLLAQPLALSFSCDSREYGYYADVSNNCQI 72
A+V + A QV +SP+ AY LPAD E L ++ SFSCD + YGYYADV NN Q+
Sbjct: 525 AVVSTLAFATLFVANQV--SSQSPS--AYQLPADAEFTLDSQVSTSFSCDGQAYGYYADVDNNXQV 586
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000000835 (supercontig:LSalAtl2s:LSalAtl2s113:9186:21674:1 gene:EMLSAG00000000835 transcript:EMLSAT00000000835 description:"maker-LSalAtl2s113-augustus-gene-0.13") HSP 1 Score: 154.066 bits (388), Expect = 6.647e-47 Identity = 69/105 (65.71%), Postives = 82/105 (78.10%), Query Frame = 0
Query: 29 SPNNQAYNLPADGETLLAQPLALSFSCDSREYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYNIVEFGKI 133
S + AY PAD E L PL+ +F+CD + YGYYADV NNC++FHICLPIEDD G VI+TAQWSFICGN T+FDQ TLTCNY +DS+PC ++ SLY VEFGKI
Sbjct: 126 SQSEXAYQFPADAEAYLDAPLSTTFTCDGQPYGYYADVDNNCKVFHICLPIEDDLGQVIQTAQWSFICGNTTVFDQNTLTCNYAEDSLPCSESPSLYGAVEFGKI 230 HSP 2 Score: 143.28 bits (360), Expect = 9.116e-43 Identity = 70/131 (53.44%), Postives = 88/131 (67.18%), Query Frame = 0
Query: 3 VKSVAIVFSACIAGYLAMPQVYPDGESPNNQAYNLPADGETLLAQPLALSFSCDSREYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYNIVEFGKI 133
V S+A++F A Y S + AY AD E L P+ +F+CD + YGYYADV NNCQ+FHICLPIEDD G +IETAQ+SFICGN T+FDQ TLTCN+ + ++PC ++ SLY VEFGKI
Sbjct: 233 VTSIAVLFLA-----------YQVVLSQSQTAYQFAADAELYLDAPIQTTFTCDGQPYGYYADVDNNCQVFHICLPIEDDVGQIIETAQYSFICGNATVFDQNTLTCNFPEYAIPCSESPSLYGAVEFGKI 352 HSP 3 Score: 115.546 bits (288), Expect = 4.238e-32 Identity = 55/97 (56.70%), Postives = 65/97 (67.01%), Query Frame = 0
Query: 8 IVFSACIAGYLAMPQVYPDGESPNNQAYNLPADGETLLAQPLALSFSCDSREYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQ 104
I+ S IA Q S + AY PAD E L PL+ +F+CD + YGYYADV NNC++FHICLPIEDD G VI+TAQWSFICGN T+FDQ
Sbjct: 4 IILSIAIASVFVAHQ----ATSQSEXAYQFPADAEXXLDAPLSTTFTCDGQPYGYYADVDNNCKVFHICLPIEDDLGQVIQTAQWSFICGNTTVFDQ 96
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000004829 (supercontig:LSalAtl2s:LSalAtl2s254:503877:506097:1 gene:EMLSAG00000004829 transcript:EMLSAT00000004829 description:"maker-LSalAtl2s254-augustus-gene-4.5") HSP 1 Score: 80.4925 bits (197), Expect = 7.565e-21 Identity = 44/99 (44.44%), Postives = 59/99 (59.60%), Query Frame = 0
Query: 39 ADGETLLAQPLALSFSCDSREYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYNIVE-FGKIDDA 136
A + L+ P LSFSCD R YG YAD S NCQ+FHICL D +W+F+C N T+F+Q+ C+Y + V C AES Y + E FG ++D+
Sbjct: 18 AVSQDLIELPSDLSFSCDGRSYGXYADPSTNCQVFHICLGDGD--------VKWTFLCPNQTIFNQEYFVCDYAIN-VDCGSAESFYTLNENFGVVEDS 107
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000012168 (supercontig:LSalAtl2s:LSalAtl2s877:30141:49566:1 gene:EMLSAG00000012168 transcript:EMLSAT00000012168 description:"maker-LSalAtl2s877-snap-gene-0.9") HSP 1 Score: 64.6994 bits (156), Expect = 2.220e-13 Identity = 37/95 (38.95%), Postives = 56/95 (58.95%), Query Frame = 0
Query: 36 NLPADGETLLAQPLALSFSCDSR-EYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYNIVE 129
+P + +LA+ SFSC+ + E GYYAD CQ FH+C D G + A++SF+CGNGT+F+Q+ C++ + C QA +LY+ E
Sbjct: 141 GIPGEDXPILAEVPETSFSCEGQVEGGYYADPDTECQAFHVCA--ADGEGGL---AKYSFLCGNGTIFNQKAFICDWWFN-FDCSQAIALYSKNE 229 HSP 2 Score: 62.7734 bits (151), Expect = 9.924e-13 Identity = 35/95 (36.84%), Postives = 57/95 (60.00%), Query Frame = 0
Query: 36 NLPADGETLLAQPLALSFSCDSR-EYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYNIVE 129
+P + +LA+ SFSC+ + E GYYAD CQ FH+C + ++G A++SF+CGNGT+F+Q+ C++ + C +A +LY+ E
Sbjct: 356 GIPGEDYPILAEVPETSFSCEGQVEGGYYADPDTECQAFHVCA-ADGESG----LAKYSFLCGNGTIFNQEAFICDWWFN-FDCSZATALYSKNE 444
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000005603 (supercontig:LSalAtl2s:LSalAtl2s2:844234:850155:-1 gene:EMLSAG00000005603 transcript:EMLSAT00000005603 description:"maker-LSalAtl2s2-augustus-gene-8.25") HSP 1 Score: 62.7734 bits (151), Expect = 1.018e-12 Identity = 36/101 (35.64%), Postives = 55/101 (54.46%), Query Frame = 0
Query: 28 ESPNNQAYNLPADGETLLAQPLALSFSCDSREYG-YYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYNI 127
E+ N +P + + + FSCD R G Y+D CQ+FHIC G+ ++SF+C NGT+F+Q+ L C++ + CDQAE+LY+I
Sbjct: 230 EALNLSLPGIPVEDYPIFSSVPITKFSCDDRLIGGLYSDPEAQCQVFHIC-----GQGSRNGLTKYSFLCPNGTIFNQEYLICDWWFN-FDCDQAENLYSI 324 HSP 2 Score: 55.4546 bits (132), Expect = 3.573e-10 Identity = 33/91 (36.26%), Postives = 47/91 (51.65%), Query Frame = 0
Query: 37 LPADGETLLAQPLALSFSCDSR-EYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYN 126
+P + + Q SFSC + G YAD CQIFHIC + ++SF C +GT+F+Q L C++ + V C AESLY+
Sbjct: 48 VPGEDYPVYGQVPRTSFSCKGKINGGLYADPETECQIFHIC-----GVSTINNVDKFSFFCPSGTIFNQDHLICDWWFN-VDCSLAESLYS 132
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000005838 (supercontig:LSalAtl2s:LSalAtl2s3161:1:961:1 gene:EMLSAG00000005838 transcript:EMLSAT00000005838 description:"maker-LSalAtl2s3161-augustus-gene-0.2") HSP 1 Score: 61.6178 bits (148), Expect = 1.297e-12 Identity = 34/79 (43.04%), Postives = 49/79 (62.03%), Query Frame = 0
Query: 52 SFSCDSR-EYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYNIVE 129
SFSC+ + E GYYAD CQ FH+C D G + A++SF+CGNGT+F+Q+ C++ + C QA +LY+ E
Sbjct: 3 SFSCEGQVEGGYYADPDTQCQAFHVC--AADGEGGL---AKYSFLCGNGTIFNQEAFICDWWFN-FDCSQATALYSKNE 75
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000002688 (supercontig:LSalAtl2s:LSalAtl2s154:816690:826582:1 gene:EMLSAG00000002688 transcript:EMLSAT00000002688 description:"maker-LSalAtl2s154-augustus-gene-8.8") HSP 1 Score: 62.003 bits (149), Expect = 2.068e-12 Identity = 31/78 (39.74%), Postives = 47/78 (60.26%), Query Frame = 0
Query: 52 SFSCDSR-EYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCN--YEQDSVPCDQAESLYN 126
SF+C+ + GYYADV +CQ+FH+C+ + + E + F+C N T+FDQQ L C +E D C Q+ SL++
Sbjct: 35 SFTCEDKITGGYYADVEADCQLFHVCVQVSE-----FEFQDFRFLCPNDTVFDQQNLVCTNWFEVD---CAQSVSLFS 104
BLAST of cuticle protein vs. nr
Match: gi|155966141|gb|ABU41025.1| (putative cuticle protein [Lepeophtheirus salmonis]) HSP 1 Score: 156.762 bits (395), Expect = 1.042e-46 Identity = 72/106 (67.92%), Postives = 88/106 (83.02%), Query Frame = 0
Query: 30 PNNQAYNLPADGETLLAQPLALSFSCDSREYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYNIVEFGKIDD 135
P +Q+Y LP + E++L P++ SFSC+ ++YGYYADV NNCQIFHICLPIEDDAG VIETA +SFICGN T+FDQQTLTCN+ D+ PC++A SLYN VEFGKI D
Sbjct: 24 PTDQSYLLPNEYESILFNPISTSFSCEGQQYGYYADVDNNCQIFHICLPIEDDAGFVIETAHFSFICGNQTIFDQQTLTCNHLDDAFPCNEAPSLYNAVEFGKIPD 129
BLAST of cuticle protein vs. nr
Match: gi|1325281974|ref|XP_023325680.1| (uncharacterized protein LOC111699283 [Eurytemora affinis]) HSP 1 Score: 137.117 bits (344), Expect = 5.004e-39 Identity = 66/127 (51.97%), Postives = 89/127 (70.08%), Query Frame = 0
Query: 8 IVFSACIAGYLAMPQVYPDGESPNNQAYNLPADGETLLAQPLALSFSCDSREYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYNIVEFGKID 134
+V CI L+M + D P N NLPA E +L+ P + FSC+ + YGYYADV NNC++FHICLPIE++ G VIE A+WSF+CGN T+FDQQTLTCN+ D+ PC+++ SL+ VEFG ++
Sbjct: 1 MVGKLCILLSLSMCILGQD--EPTN---NLPAGSEDILSNPYSDGFSCEGQAYGYYADVENNCEVFHICLPIENNEGEVIEYAKWSFVCGNQTVFDQQTLTCNHRDDAFPCEESSSLFGAVEFGLVE 122
BLAST of cuticle protein vs. nr
Match: gi|1067067841|ref|XP_018023120.1| (PREDICTED: uncharacterized protein LOC108679102 [Hyalella azteca] >gi|1067067843|ref|XP_018023129.1| PREDICTED: uncharacterized protein LOC108679102 [Hyalella azteca] >gi|1067067845|ref|XP_018023140.1| PREDICTED: uncharacterized protein LOC108679102 [Hyalella azteca]) HSP 1 Score: 129.028 bits (323), Expect = 7.280e-36 Identity = 57/104 (54.81%), Postives = 76/104 (73.08%), Query Frame = 0
Query: 32 NQAYNLPADGETLLAQPLALSFSCDSREYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYNI--VEFGKI 133
AY L A +T+L+ PL +FSCD YGYYAD NNC++FH+CLPI D+ GA++ETA +SFICGN T+F Q +LTC Y ++ PCDQA +LY++ EFG+I
Sbjct: 20 RMAYELSAGYDTVLSAPLQTTFSCDDLPYGYYADTDNNCEVFHVCLPIADEIGALVETAHFSFICGNETVFSQDSLTCTYRDEAFPCDQARTLYDLSNAEFGRI 123
BLAST of cuticle protein vs. nr
Match: gi|1067067850|ref|XP_018023174.1| (PREDICTED: uncharacterized protein LOC108679113 [Hyalella azteca]) HSP 1 Score: 127.872 bits (320), Expect = 2.563e-35 Identity = 57/103 (55.34%), Postives = 79/103 (76.70%), Query Frame = 0
Query: 34 AYNLPADGETLL-AQPLALSFSCDSREYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYNIV--EFGKI 133
AY LP +++L A+ +F C R YGYYAD N+CQIFH+CLPIEDDAG ++ETA +SFICGN T+FDQ TLTCN E++++PCD+A++ Y+++ EFG +
Sbjct: 21 AYQLPDGADSILKARTFTQNFDCADRRYGYYADTDNDCQIFHVCLPIEDDAGQIVETAHFSFICGNQTIFDQSTLTCNDEENALPCDEAKNFYDVINAEFGVL 123
BLAST of cuticle protein vs. nr
Match: gi|1067067852|ref|XP_018023188.1| (PREDICTED: uncharacterized protein LOC108679121 [Hyalella azteca]) HSP 1 Score: 125.561 bits (314), Expect = 2.313e-34 Identity = 59/108 (54.63%), Postives = 79/108 (73.15%), Query Frame = 0
Query: 34 AYNLPADGETLL--AQPLALSFSCDSREYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYNIV--EFGKIDDAS 137
AY LP E +L + +F+C+ R YGYYAD N+CQIFH+CLPIEDD G ++ETA +SF+CGN T+FDQ +LTC+ E ++PC +AE+ Y+IV EFGKI DA+
Sbjct: 21 AYQLPDGAEFILNKGRSYTQNFNCEGRRYGYYADTDNDCQIFHVCLPIEDDVGQIVETAHFSFVCGNQTIFDQASLTCSEELAALPCSEAENFYDIVNSEFGKIIDAN 128
BLAST of cuticle protein vs. nr
Match: gi|1067097998|ref|XP_018011013.1| (PREDICTED: uncharacterized protein LOC108668336 [Hyalella azteca]) HSP 1 Score: 125.176 bits (313), Expect = 3.133e-34 Identity = 60/110 (54.55%), Postives = 76/110 (69.09%), Query Frame = 0
Query: 31 NNQAYNLPADGETLLAQPLALSFSCDSREYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYNIV--EFGKIDDASA 138
+ AY +L + SFSCD R YGYYADV N+C+IFH+C P+EDDAGA+ ETAQ+SF CGN T+F Q TL+C + +D+ PCDQA Y+IV EFG+I DA A
Sbjct: 16 GHGAYRFSDGYLDVLGGEPSQSFSCDGRPYGYYADVDNDCEIFHVCWPVEDDAGAITETAQYSFFCGNQTVFSQDTLSCAHPEDAFPCDQAAGYYDIVNAEFGRIPDAKA 125
BLAST of cuticle protein vs. nr
Match: gi|1067097727|ref|XP_018010866.1| (PREDICTED: uncharacterized protein LOC108668205 [Hyalella azteca]) HSP 1 Score: 117.472 bits (293), Expect = 3.930e-31 Identity = 62/135 (45.93%), Postives = 84/135 (62.22%), Query Frame = 0
Query: 1 MFVKSVAIVFSACIAGYLAMPQVYPDGESPNNQAYNLPADGETLLAQPLALSFSCDSREYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYNIVE-FGKID 134
M++KSVA +AC L M + SPN Y LP++ + P+ FSCD +YGYYADV+N C+IFH+C P D G I T WSFICG GT+F+QQ L C++ +++ PCDQA + YN+ E FG+ D
Sbjct: 3 MYIKSVAR--AAC--ALLVMAVLVSGDSSPNE--YELPSNSSVVNFGPIVTGFSCDGLQYGYYADVANGCRIFHVCYPYMDAEG-FIRTRMWSFICGLGTVFNQQALVCDFPENTTPCDQAPNFYNVNEYFGRED 130
BLAST of cuticle protein vs. nr
Match: gi|169931080|gb|ACB05778.1| (cuticular protein [Artemia franciscana]) HSP 1 Score: 113.235 bits (282), Expect = 1.536e-29 Identity = 58/137 (42.34%), Postives = 77/137 (56.20%), Query Frame = 0
Query: 1 MFVKSVAIVFSACIAGYLAMPQVYPDGESPNNQAYNLPADGETLLAQPLALSFSCDSREYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYNIVE--FGKIDD 135
MF S + S Y M + PDG ++LL + L +FSC+ + YGYYADV NNCQIFH+C P+ D G ETAQ+SF+CGN T+F Q+TLTC +D++PC +A S Y FG + D
Sbjct: 1 MFRFSSFVALSLVAVAYARMAYILPDGT-------------DSLLNEELKTTFSCEGKNYGYYADVDNNCQIFHVCQPVVDAEGKSQETAQFSFVCGNLTIFSQETLTCTLAEDALPCSEAPSFYETSNEGFGVVPD 124
BLAST of cuticle protein vs. nr
Match: gi|1067094617|ref|XP_018009199.1| (PREDICTED: uncharacterized protein LOC108666788 [Hyalella azteca]) HSP 1 Score: 108.612 bits (270), Expect = 1.292e-27 Identity = 53/133 (39.85%), Postives = 86/133 (64.66%), Query Frame = 0
Query: 3 VKSVAIVFSACIAGYLAMPQVYPDGESPNNQAYNLPADGETLLAQPLALSFSCDSREYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYNIVEFGKIDD 135
+K + IV + A+P+V D +P++ + LP++ T++ + F C R++GYYAD NNCQIFH+C+P ED GA + WSF+CG G++FDQ TLTCNY + ++PC++A+S Y I ++ +++
Sbjct: 1 MKFLVIVSVVLGVAFAAVPRVRRD-STPDD--FELPSNA-TVIVGRINHGFDCSGRKFGYYADDQNNCQIFHVCMPYEDSEGAP-QLRMWSFLCGVGSVFDQATLTCNYPESALPCNEAKSYYGINDYFHLEE 128
BLAST of cuticle protein vs. nr
Match: gi|1067094613|ref|XP_018009197.1| (PREDICTED: uncharacterized protein LOC108666785 [Hyalella azteca]) HSP 1 Score: 109.383 bits (272), Expect = 1.549e-27 Identity = 56/117 (47.86%), Postives = 77/117 (65.81%), Query Frame = 0
Query: 19 AMPQVYPDGESPNNQAYNLPADGETLLAQPLALSFSCDSREYGYYADVSNNCQIFHICLPIEDDAGAVIETAQWSFICGNGTMFDQQTLTCNYEQDSVPCDQAESLYNIVEFGKIDD 135
A+ +V D +P+N Y LP++ ++ + F C R +GYYAD++NNCQIFHIC+P ED G V + WSF+CG GT+FDQ L CNY +DS+PC QAES YNI ++ +D
Sbjct: 41 AVSRVRRD-STPDN--YELPSNASVVVGG-INYGFDCAGRNFGYYADLNNNCQIFHICMPYEDAEG-VPQMRMWSFLCGVGTIFDQAQLVCNYPEDSLPCAQAESSYNINDYFHRED 152 The following BLAST results are available for this feature:
BLAST of cuticle protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of cuticle protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of cuticle protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold286_size222086:116463..116885+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold286_size222086-processed-gene-1.5 ID=snap_masked-scaffold286_size222086-processed-gene-1.5|Name=cuticle protein|organism=Tigriopus kingsejongensis|type=gene|length=423bp|location=Sequence derived from alignment at scaffold286_size222086:116463..116885+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'cuticle protein' has the following synonyms
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