trna pseudouridine synthase 3, snap_masked-scaffold403_size186359-processed-gene-0.34 (gene) Tigriopus kingsejongensis

Overview


Name	trna pseudouridine synthase 3
Unique Name	snap_masked-scaffold403_size186359-processed-gene-0.34
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of trna pseudouridine synthase 3 vs. L. salmonis genes
Match: EMLSAG00000000437 (supercontig:LSalAtl2s:LSalAtl2s1068:424499:425749:-1 gene:EMLSAG00000000437 transcript:EMLSAT00000000437 description:"maker-LSalAtl2s1068-snap-gene-3.26")

HSP 1 Score: 421.394 bits (1082), Expect = 1.175e-137
Identity = 208/411 (50.61%), Postives = 277/411 (67.40%), Query Frame = 0

Query:   36 LKNVIKKLTGQTDHGSEAEGQMGSRKRKTPRPFDYTLYKKRHVLLQVAYFGWDYYGFAVQEITGKTIESELFRALLLTRLIESRETSNYHRCGRTDKGVSALKQVVSIDLRSNLLEGKSVFAPEGCRAHERRVPGDERIEIDFCKMLNANLPDHIHVTAWAPCPSLDFSARFDCQLRTYKYFFPQGSM-SLDRINAAGQHLVGSHDYRNFCKLDVGNGVVSYTRRIDRVSAVPVQEAEAEGGEGYRMCALTVVGKAFLWHQIRCIVAVLFRVGEGLEAPSVIQELLDVAKNPSRPQYSMASEMALNLFDCQYEGITWHHSEESLLIVMKRLQALWTEHEVKATMLKASLCEMQANAQLPSLKHFN----RQTESLVPNKGKSKSYLPLMQMMTCTSLEDKISQTEAKKKRS 441
            L+NVI K         ++  +   R +K  R FD++LYKKR VL Q+ YFGW+Y+GF  QE +  TIE+ LF+ALL T LI+SRETSNYHRCGRTDKGV A +QV+SID+R+NL EG  VF    C+A  R    D   EID+ K++N+NLP  I + AW P  + + SARFDC+ RTYKYFFP GS+ SL ++N AG  LVGSHD+RNFCK+DV NGV++Y RR+  VS   ++ ++ +    Y +C L V G AFLWHQIRCIV VLF +G+G E P +I ELLD+ KNP RPQY +ASE+ LNLFDC YEG+TW ++ ESL   +K  Q LW EH +KA M+KA L E+++        HF+     Q  +L+P+  K + Y P ++M+ C SLE+KI +   ++KR+
Sbjct:    1 LRNVIAK-------KGDSRDKKIVRHKKKGREFDHSLYKKRKVLFQITYFGWNYHGFTTQEDSCMTIEAHLFKALLTTCLIQSRETSNYHRCGRTDKGVXAFRQVISIDVRTNLKEGIGVFDYPDCKADSR---PDMPHEIDYIKIINSNLPPDIQLIAWTPAQNRELSARFDCKKRTYKYFFPLGSIKSLSKMNEAGAKLVGSHDFRNFCKMDVSNGVLTYIRRMVNVSTSVLEPSKEKESSPYDLCVLKVEGNAFLWHQIRCIVTVLFHIGQGREEPELIDELLDIEKNPCRPQYGLASEIPLNLFDCSYEGLTWDYNLESLRTCIKGFQELWAEHAIKAQMIKACLDELES--------HFDERVIEQASALLPH-SKQRIYTPFLEMLKCPSLEEKIQRLNKRRKRN 392

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BLAST of trna pseudouridine synthase 3 vs. L. salmonis genes
Match: EMLSAG00000009098 (supercontig:LSalAtl2s:LSalAtl2s572:252815:272447:1 gene:EMLSAG00000009098 transcript:EMLSAT00000009098 description:"maker-LSalAtl2s572-augustus-gene-1.21")

HSP 1 Score: 234.572 bits (597), Expect = 4.914e-63
Identity = 118/174 (67.82%), Postives = 139/174 (79.89%), Query Frame = 0

Query:  981 GEDDLDSYFD----ADEDEEQRGDKQGLLGRDTNDVDKTASRQSTSSADGDVNPKAYPLAEQALTTKILNLVQQGVNYKQLRKGANEATKTLNRGQAEFVVMAADAEPLEILLHIPLLCEDKNVPYVFIRSKQALGRACGVSRPVIAASITQNEGSQIKPQITTIQNEIEKLLV 1150
            G+  LD ++D      + E++RG ++    R    V    +R      +G+VNPKAYPLAEQALT KILNLVQ+  NYKQL KGANEATKTLNRGQAEF+++AADAEPLEI+LHIPLLCEDKNVPYVF+RSKQALGRACGVSRPVI+AS+TQNEGSQ+KPQI +IQ EIEKLLV
Sbjct: 1266 GKGMLDFHYDDINLKGQGEQKRGKERAANSR-VLLVTTCYNRHLNIMTEGEVNPKAYPLAEQALTAKILNLVQEASNYKQLHKGANEATKTLNRGQAEFIILAADAEPLEIVLHIPLLCEDKNVPYVFVRSKQALGRACGVSRPVISASVTQNEGSQLKPQINSIQKEIEKLLV 1438

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BLAST of trna pseudouridine synthase 3 vs. L. salmonis genes
Match: EMLSAG00000001319 (supercontig:LSalAtl2s:LSalAtl2s1223:139819:146383:1 gene:EMLSAG00000001319 transcript:EMLSAT00000001319 description:"maker-LSalAtl2s1223-augustus-gene-1.6")

HSP 1 Score: 161.384 bits (407), Expect = 5.337e-43
Identity = 127/438 (29.00%), Postives = 204/438 (46.58%), Query Frame = 0

Query:  485 TILVILDGMRHDYLSPEATPNLNAMV--EKGVHIPKVMPIFPAMKYPNLASLLTGVYSENHNVLNSDSYFSQKHQRLVFKNETAFWEGMTKMGTIWELF---KKSHPRGKVGIMGFPELQWIWSNHEDVPKSPQNQSQGLPNNRTQRDAPALGSNWNVMLDTSKLDDAMERLFDSDGIVFATFILNEPGTTAQAMGPDAAE--SAIKRVDTIIGKILESVEVKGMSPTTNIIVASTPAYSDVAVKNVFQV-KNFSQRKMKVFGQSPIYHVTSVEAGDILGLYTDCTNSQGEHGFTVHNSDAIPEKWHYRASPDVRVNNWFVLVAKHGYGFAEDFLPRIERLRKEFGRQIPGSFQEMIYGSNGFDPNFSQMQTSLVAMGPAFKAGIRARPINQSHDITTVDVFHLLGHALGIDLP-GDRNGSLAHQFFLLANPPADGIK 913
            T+ V+LDG R DY+    TPN+  +   E     P ++P+FP    PNLAS++TG +S+ H +   D   S   ++ V  +   +W  + KMGTIW+ +     S P    G++ +P    I S       S     + + N++T                 SKL  +++ +F +D + F +  ++EPG+ A   GP++ +   +I ++D  IG++     VK     TNII+ STP Y +V + NV  + K   +    V G SP   +   E G+ + ++        +  F  +  + IP  WHY   P V++     L+A  G  F EDF   ++R   + G + P    E  YG +G+  N     + L+ +GPAFK       +    D   VD++ LL H LG+D    DR G L      L+NPP + I+
Sbjct:   20 TLFVVLDGFRFDYVKLFQTPNIARITNGENTFFHPGILPVFPXTTLPNLASMITGNFSDTHGITIKDPVRSHS-KKDVTPSSPEYWGKLRKMGTIWDSYVXSATSXPHKPPGLISWPFSTIIDS-------SKDKHYKHVSNSKTL---------------ASKL-SSIKSMFTNDSLDFVSVYVDEPGSYALPYGPESMQVNESISKLDAWIGEL-----VKEFKEDTNIIITSTPGYLNVTLSNVIYLHKILEKGTYSVHGNSPFLSIVPKE-GEEINIFQILDQ---QTSFKTYYKNNIPANWHYVLDPTVKI----ALLASQGQVF-EDFFKTVKRFHSKHGIKEP---LERTYGLSGYMDNLKNSSSILLGIGPAFKKETSKSFVRD--DARVVDIYALLSHVLGLDTSNNDREGRLDVFTHDLSNPPIETIE 414

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BLAST of trna pseudouridine synthase 3 vs. L. salmonis genes
Match: EMLSAG00000001908 (supercontig:LSalAtl2s:LSalAtl2s132:388651:388926:-1 gene:EMLSAG00000001908 transcript:EMLSAT00000001908 description:"augustus_masked-LSalAtl2s132-processed-gene-4.0")

HSP 1 Score: 132.494 bits (332), Expect = 8.508e-37
Identity = 62/91 (68.13%), Postives = 77/91 (84.62%), Query Frame = 0

Query: 1040 LTTKILNLVQQGVNYKQLRKGANEATKTLNRGQAEFVVMAADAEPLEILLHIPLLCEDKNVPYVFIRSKQALGRACGVSRPVIAASITQNE 1130
            +TT+ILN VQ+  NYKQLRKGANEAT TLNRGQ EF+++A+D EPLEILL+I L+CEDKNV  +FIR KQALGR  GVS  +I+AS+T++E
Sbjct:    1 MTTQILNSVQEASNYKQLRKGANEATITLNRGQGEFIILASDVEPLEILLNITLICEDKNVDSIFIRRKQALGRTYGVSCSIISASVTKDE 91

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BLAST of trna pseudouridine synthase 3 vs. L. salmonis genes
Match: EMLSAG00000008887 (supercontig:LSalAtl2s:LSalAtl2s554:370357:371198:1 gene:EMLSAG00000008887 transcript:EMLSAT00000008887 description:"maker-LSalAtl2s554-augustus-gene-3.43")

HSP 1 Score: 65.0846 bits (157), Expect = 1.998e-12
Identity = 33/116 (28.45%), Postives = 61/116 (52.59%), Query Frame = 0

Query: 1034 PLAEQALTTKILNLVQQGVNYKQ-LRKGANEATKTLNRGQAEFVVMAADAEPLEILLHIPLLCEDKNVPYVFIRSKQALGRACGVSRPVIAASITQNEGSQIKPQITTIQNEIEKL 1148
            P+A + L  KI   +++G+ +K  +R G       L +G+   ++ A D  P++++ H+P + E+K++PY +  S+  LG A GV R  +   I ++E    K     I +E+  L
Sbjct:   36 PMASRKLAKKIYKCIKKGMKHKTYVRSGLKSVQLHLRKGERGILIFAGDVTPIDVMCHLPAVAEEKDIPYCYTPSRADLGSAMGVKRGTLTLLIREHE--DYKELFDEITSEVHXL 149

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BLAST of trna pseudouridine synthase 3 vs. L. salmonis genes
Match: EMLSAG00000007406 (supercontig:LSalAtl2s:LSalAtl2s421:141965:143283:-1 gene:EMLSAG00000007406 transcript:EMLSAT00000007406 description:"maker-LSalAtl2s421-augustus-gene-1.12")

HSP 1 Score: 57.3806 bits (137), Expect = 4.204e-9
Identity = 27/76 (35.53%), Postives = 44/76 (57.89%), Query Frame = 0

Query: 1057 LRKGANEATKTLNRGQAEFVVMAADAEPLEILLHIPLLCEDKNVPYVFIRSKQALGRACGVSRPVIAASITQNEGS 1132
            +R G N  T  + + +A+ V++A D +P+EI+L +P LC    VPY  +++K  LG+  G  +     +ITQ E S
Sbjct:  137 VRHGINTVTTLVEKKKAKLVIIANDVDPIEIVLFLPALCRKMGVPYCIVKNKARLGKVAG-RKTCSCLAITQVESS 211

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BLAST of trna pseudouridine synthase 3 vs. L. salmonis genes
Match: EMLSAG00000005632 (supercontig:LSalAtl2s:LSalAtl2s302:2120:5842:1 gene:EMLSAG00000005632 transcript:EMLSAT00000005632 description:"maker-LSalAtl2s302-augustus-gene-0.10")

HSP 1 Score: 55.4546 bits (132), Expect = 6.205e-8
Identity = 100/453 (22.08%), Postives = 183/453 (40.40%), Query Frame = 0

Query:  486 ILVILDGMRHDYLSPEATPNLNA---MVEKGVHIPKVMPIFPAMKYPNLASLLTGVYSENHNVLNSDSYFSQKHQRLVFKNETA------FWEGMTKMGTIWELFKKSHPRGKVGIMGFPELQWIWSNHEDVPKSPQNQSQGLPNNRTQRDAPALGSNWNVMLDTSKLDDAMERLFDSDGIVFATFILNEPGTTAQAMGPDAAES-----AIKRVDTIIGKILESVEVK-GMSPTTNIIVASTPAYSDV-AVKNVFQVKNFSQRKMKVFGQSPIYHVTSVEAGDILGLYTDCTNSQGEHGF-TVH-------NSDAIPEKWHYRASPDV----------------RVNNWFVLVAKHGYGFAEDFLPRIERLRKEFGRQIPGSFQEMIYGSNGFDPNFS----------QMQTSLVAMGPAFKAG-IRARPINQSHDITTVDVFHLLGHALGI 887
             L+I+ G R D L+ E   +L +   + + G  IPKV P FPA  +   +S+ +G+YSE+H V+  D  +   H++L  ++++       +W+       IWE  K+     KV I         W + + + K+    ++     +  ++A    S   + L  ++  + + R      IV+         T  +AM    A S     A+K VD I+   L  +  K  +    N++V S    +D+   + ++  + F    ++    S  Y   +  +     L   C  ++G   + T H       +S  +PE  HYR    V                +V+N  + V ++  G  +       R  + + +++P   ++M   S  F+ +++           M+T   AMGP FKA  +   PI       TVD++ +L   L I
Sbjct:   91 FLIIIGGFRWDLLTQERLKSLKSFAYLSQHGTTIPKVTPSFPAEDFSVWSSIASGLYSEDHGVV-GDFMYDLSHRKLFNRSDSKSMSDPHWWK---HFNPIWEEAKRY--ERKVAIFN-------WHHCDRLGKTTNGTTKKCSPYKHLKEA---NSQEKMALHFNEAFNKIHRNKYDLSIVYT-------DTIKRAMEKHGARSPALDKALKDVDDILQAKLTDIRSKTKLGLKMNMVVISDYGMTDIQGTETLYLDEIFDLNIVQFIIYSSGYATIAPYSLKQSHLLEVCEGTKGIQCYLTAHIQHPPVPSSKILPENLHYRFGEYVQDIVVLADLAYDFKARKVSNKLIPVNRYVQGNRKAGSGWTTRPVEPYFKKLPRG-KKMKDASEEFNISYTLHQNYMKYKDDMKTMAFAMGPDFKANYVLPNPIE------TVDIYQVLCFLLQI 513

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BLAST of trna pseudouridine synthase 3 vs. SwissProt
Match: gi|52783242|sp|Q9JI38.2|PUS3_MOUSE (RecName: Full=tRNA pseudouridine(38/39) synthase; AltName: Full=tRNA pseudouridine synthase 3; AltName: Full=tRNA pseudouridylate synthase 3; AltName: Full=tRNA-uridine isomerase 3)

HSP 1 Score: 327.405 bits (838), Expect = 1.304e-99
Identity = 180/434 (41.47%), Postives = 250/434 (57.60%), Query Frame = 0

Query:   25 EVRKLRLQVLQLKNVIKKLTGQTDHG------SEAEGQMGSRKRKTPRPFDYTLYKKRHVLLQVAYFGWDYYGFAVQEITGKTIESELFRALLLTRLIESRETSNYHRCGRTDKGVSALKQVVSIDLRSNLLEGKSVFAPEGCRAHERRVPGDERIEIDFCKMLNANLPDHIHVTAWAPC-PSLDFSARFDCQLRTYKYFFPQGSMSLDRINAAGQHLVGSHDYRNFCKLDVGNGVVSYTRRI--DRVSAVPVQEAEAEGGEGYRMCALTVVGKAFLWHQIRCIVAVLFRVGEGLEAPSVIQELLDVAKNPSRPQYSMASEMALNLFDCQYEGITWHHSEESLLIVMKRLQALWTEHEVKATMLKASLCEMQA------------------NAQLPSLKHFNRQTESLVPNKGKSKSYLPLMQMMTCTSLEDKI 431
            ++ KL  +V +L+  +++L  + +        S  E  +GS K K  R FD++ + +RHV L++AY GW Y GFA QE T  TIE +LF AL  TRL+ESR+TSNYHRCGRTDKGVSA  QV+S+DLRS     +   + +    HE     D   EI +  +LN  LP  I V AWAP  PS  FSARF C  RTY+YFFP+  + +  +N A Q  VG+HD+RN CK+DV NGV+++ R I   +V  V     E    E +++C   V+G+AFL+HQ+RC++A+LF +G+G+E P +I ELL++ KNP +PQYSMA E  L L+DC++E   W +  E     +  LQ LW  H VK  ML + L  + +                  N Q P +KH +   E +     K ++Y PLM    C  LE +I
Sbjct:    9 QIEKLLNRVKELEQEVERLKKKKEQANNIKDSSIRENSLGSGKAK--RAFDFSAHGRRHVALKIAYLGWGYQGFASQENTSNTIEEKLFEALTKTRLVESRQTSNYHRCGRTDKGVSAFGQVISLDLRSQFPTSRD--SEDSNLKHE---ADDLAKEIRYTHILNRVLPADIRVLAWAPVEPS--FSARFSCLERTYRYFFPRADLDIATMNYAAQKYVGTHDFRNLCKMDVANGVINFQRTILCAQVQLVAQSPGEERRQEPFQLCQFEVIGQAFLYHQVRCMMAILFLIGQGMEKPEIIDELLNIQKNPQKPQYSMAVEFPLVLYDCKFENTKWIYDHEVQEFNVTHLQQLWANHAVKTHMLYSMLQGLDSVMVTCAAGTKMDEATEWRNIQPPVIKHTSAFVEGV-----KMRTYKPLMDRPKCQGLESRI 428

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BLAST of trna pseudouridine synthase 3 vs. SwissProt
Match: gi|119391067|sp|Q3SX07.1|PUS3_BOVIN (RecName: Full=tRNA pseudouridine(38/39) synthase; AltName: Full=tRNA pseudouridine synthase 3; AltName: Full=tRNA pseudouridylate synthase 3; AltName: Full=tRNA-uridine isomerase 3)

HSP 1 Score: 323.939 bits (829), Expect = 2.499e-98
Identity = 176/425 (41.41%), Postives = 251/425 (59.06%), Query Frame = 0

Query:   25 EVRKLRLQVLQLKNVIKKLTGQTDHGSEAEGQMGSRKR--KTPRPFDYTLYKKRHVLLQVAYFGWDYYGFAVQEITGKTIESELFRALLLTRLIESRETSNYHRCGRTDKGVSALKQVVSIDLRSNLLEGKSVFAPEGCRAHERRVPGDERIEIDFCKMLNANLPDHIHVTAWAPCPSLDFSARFDCQLRTYKYFFPQGSMSLDRINAAGQHLVGSHDYRNFCKLDVGNGVVSYTRRIDRVSAVPVQEAEAEGG--EGYRMCALTVVGKAFLWHQIRCIVAVLFRVGEGLEAPSVIQELLDVAKNPSRPQYSMASEMALNLFDCQYEGITWHHSEESLLIVMKRLQALWTEHEVKATMLKASL---------C----EMQANAQLPSLK-HFNRQTESLVPNKGKSKSYLPLMQMMTCTSLEDKI 431
            +  KL  +V +L+  +K+L  +  +  ++  +  S     K  R FD++ + +RHV L++AY GW Y GFA QE T  TIE +LF AL  TRL+E+R+TSNYHRCGRTDKGVSA  QV+S+DLRS++ +G+     +    + +    D   EI +  +LN  LP  I V AWAP  +  FSARF C  RTY+YFFP+ ++ +  +N A Q  VG+HD+RN CK+DV NGV+++ R I       V +   E G  E +++C   V G+AFL+HQ+RC++AVLF +G+G+E P VI ELL++ KNP +PQYSMA E  L L+DC++E I W +  E     +  LQ LW  H VK  ML + L         C    +M    +  ++K    +QT + V    K ++Y PLM    C  LE +I
Sbjct:   10 QTEKLLKRVQELEQEVKRLKKEQANNKDSNIRENSSGAGGKPKRAFDFSAHGQRHVALKIAYLGWGYQGFASQENTSNTIEEKLFEALTKTRLVENRQTSNYHRCGRTDKGVSAFGQVISLDLRSHIPKGR-----DSEHFNLKNEVNDVATEIRYTHILNRVLPPDIRVLAWAPVET-SFSARFSCLERTYRYFFPRANLDIVTMNYAAQKYVGTHDFRNLCKMDVANGVINFQRTILSAQVQRVGQNLGEEGWQEPFQLCQFEVTGQAFLYHQVRCMMAVLFLIGQGMEKPEVIDELLNIEKNPQKPQYSMAVEFPLVLYDCKFENIKWIYDREVQEFNVTHLQQLWANHAVKTQMLYSMLQGLDSVALPCGTGPKMDGMIEWRNVKPSVTKQTSAFVEGV-KMRTYKPLMDRPKCQGLESRI 427

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BLAST of trna pseudouridine synthase 3 vs. SwissProt
Match: gi|126302589|sp|Q9BZE2.3|PUS3_HUMAN (RecName: Full=tRNA pseudouridine(38/39) synthase; AltName: Full=tRNA pseudouridine synthase 3; AltName: Full=tRNA pseudouridylate synthase 3; AltName: Full=tRNA-uridine isomerase 3)

HSP 1 Score: 318.931 bits (816), Expect = 2.036e-96
Identity = 179/432 (41.44%), Postives = 254/432 (58.80%), Query Frame = 0

Query:   17 TQKLEETEEVRKLRLQVLQLKNVIKKLTGQTDHGSEAEGQMGSRKRKTPRPFDYTLYKKRHVLLQVAYFGWDYYGFAVQEITGKTIESELFRALLLTRLIESRETSNYHRCGRTDKGVSALKQVVSIDLRSNLLEGKSVFAPEGCRAHERRVPGDERIEIDFCKMLNANLPDHIHVTAWAPC-PSLDFSARFDCQLRTYKYFFPQGSMSLDRINAAGQHLVGSHDYRNFCKLDVGNGVVSYTRRIDRVSAVPVQEAEAEG--GEGYRMCALTVVGKAFLWHQIRCIVAVLFRVGEGLEAPSVIQELLDVAKNPSRPQYSMASEMALNLFDCQYEGITWHHSEESLLIVMKRLQALWTEHEVKATMLKASL---------C----EMQANAQLPSLK-HFNRQTESLVPNKGKSKSYLPLMQMMTCTSLEDKI 431
            T+KL   + VR+L  +V +LK   K+     +  +  E   G+ K  T R FD++ + +RHV L++AY GW Y GFA QE T  TIE +LF AL  TRL+ESR+TSNYHRCGRTDKGVSA  QV+S+DLRS    G+     +    + +        EI +  +LN  LP  I + AWAP  PS  FSARF C  RTY+YFFP+  + +  ++ A Q  VG+HD+RN CK+DV NGV+++ R I       V ++  EG   E +++C   V G+AFL+HQ+RC++A+LF +G+G+E P +I ELL++ KNP +PQYSMA E  L L+DC++E + W + +E+    +  LQ LW  H VK  ML + L         C    +M    +  ++K    +QT + V    K ++Y PLM    C  LE +I
Sbjct:   11 TEKL--LKRVRELEQEVQRLK---KEQAKNKEDSNIRENSAGAGK--TKRAFDFSAHGRRHVALRIAYMGWGYQGFASQENTNNTIEEKLFEALTKTRLVESRQTSNYHRCGRTDKGVSAFGQVISLDLRSQFPRGR-----DSEDFNVKEEANAAAEEIRYTHILNRVLPPDIRILAWAPVEPS--FSARFSCLERTYRYFFPRADLDIVTMDYAAQKYVGTHDFRNLCKMDVANGVINFQRTILSAQVQLVGQSPGEGRWQEPFQLCQFEVTGQAFLYHQVRCMMAILFLIGQGMEKPEIIDELLNIEKNPQKPQYSMAVEFPLVLYDCKFENVKWIYDQEAQEFNITHLQQLWANHAVKTHMLYSMLQGLDTVPVPCGIGPKMDGMTEWGNVKPSVIKQTSAFVEGV-KMRTYKPLMDRPKCQGLESRI 427

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BLAST of trna pseudouridine synthase 3 vs. SwissProt
Match: gi|1353139|sp|Q09524.1|TG124_CAEEL (RecName: Full=Probable tRNA pseudouridine synthase tag-124; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase)

HSP 1 Score: 238.039 bits (606), Expect = 4.316e-68
Identity = 133/373 (35.66%), Postives = 199/373 (53.35%), Query Frame = 0

Query:   59 SRKRKTPRPFDYTLYKKRHVLLQVAYFGWDYYGFAVQEITGKTIESELFRALLLTRLIESRETSNYHRCGRTDKGVSALKQVVSIDLRSNLLEGKSVFAPEGCRAHERRVPGDERIEIDFCKMLNANLPDHIHVTAWAPCPSLDFSARFDCQLRTYKYFFPQGSMSLDRINAAGQHLVGSHDYRNFCKLDVGNG--VVSYTRRIDRVSAVPVQEAEAEGGEGYRMCALTVVGKAFLWHQIRCIVAVLFRVGEGLEAPSVIQELLDVAKNPSRPQYSMASEMALNLFDCQY--EGITWHHSEESLLIVMKRLQALWTEHEVKATMLKASLCEMQANAQLPSLKHFNRQTESLVPNKGKSKSYLPLMQMMTCTSL 427
            S K K  +  D+  + +R + +Q  Y GW++ G   Q  T  T+E+ + +AL+ T LIE     ++ RCGRTDKGVSA KQ  ++ +RS       VF  +  + H++        E+ + KMLN  LP  I V AWAP     F+ARFDC  RTYKY F +  ++L+++    + LVG HD+ NFC++D+     + SY R++  V    V  +     + Y M  LTV G  FLWH IR IV +L  +G   E PS+I +LLD+ K PSRPQY++AS+  L LFDC Y  E + W   + +L   +  LQ  W  ++ ++ M++  L E+   A+  S    N+     V ++    +Y+       C SL
Sbjct:   13 SVKSKKAKTLDFLAHPRRKIAIQFFYLGWEHDGLVQQPHTQNTVENHIMQALIKTHLIEDWTKCDFSRCGRTDKGVSAFKQTAAMVVRSLCPGDSGVFWSDSTQEHQKVDYKASGEELPYVKMLNGVLPKTIRVFAWAPVAQT-FNARFDCNRRTYKYSFAKADLNLEKMRQGAELLVGEHDFSNFCQIDMNEKRLLQSYVRKVYEVKVEQV--STHPENDMYSMVELTVSGSGFLWHMIRYIVTILQEIGRENEQPSLISQLLDLKKYPSRPQYTLASDTPLCLFDCGYKSEDVEWKVHDYTLKSTVTGLQKTWATYQARSRMMENMLGELTGMAEFSS-GDANKGLHEFVQDRPIPSNYIRFENRKMCESL 381

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BLAST of trna pseudouridine synthase 3 vs. SwissProt
Match: gi|399356|sp|P31115.1|PUS3_YEAST (RecName: Full=tRNA pseudouridine(38/39) synthase; AltName: Full=Depressed growth-rate protein DEG1; AltName: Full=tRNA pseudouridine synthase 3; AltName: Full=tRNA pseudouridylate synthase 3; AltName: Full=tRNA-uridine isomerase 3)

HSP 1 Score: 224.942 bits (572), Expect = 3.952e-63
Identity = 126/359 (35.10%), Postives = 197/359 (54.87%), Query Frame = 0

Query:   59 SRKRKTPRPFDYTLYKKRHVLLQVAYFGWDYYGFAVQ-EITG-KTIESELFRALLLTRLIESRETSNYH--RCGRTDKGVSALKQVVSIDLRSNLLEGKSVFAPEGCRAHERRVPGDERIEIDFCKMLNANLPDHIHVTAWAPCPSLDFSARFDCQLRTYKYFFPQGSMSLDRINAAGQHLVGSHDYRNFCKLDVGNGVVSYTRRIDRVSAVPVQEAEAEGGEGYRMCALTVVGKAFLWHQIRCIVAVLFRVGEGLEAPSVIQELLDVAKNPSRPQYSMASEMALNLFDCQYEGITWHHSEESLLIVMKRLQALWTEHEVKATMLKASLCEMQANAQLPS--LKHFNRQTESLVPNKGK 411
            S+ +K P+ FD++ +  R + L+ AY GW+Y G AVQ E T   T+E  +  A+   +L+ S    +Y   RCGRTDKGVSA+ QV+S+++RSNL +             E+R P ++  EI +  +LN  LPD I ++A    P  +F ARF C  R YKY F   ++++++++ A  + VG  D+RNFCKLD    + ++ R I     +P+ E               +VG AFLWHQ+RC++A+LF VG+ LE P ++  L D+ K P RP Y MA+++ L L+DC++  + W          +K   A  TE       LKA++C +  +  LP+    +F++   +L   +GK
Sbjct:   75 SKAKKAPKKFDFSKHNTRFIALRFAYLGWNYNGLAVQKEYTPLPTVEGTILEAMNKCKLVPSMVLQDYKFSRCGRTDKGVSAMNQVISLEVRSNLTD------------EEQRDPTNDSREIPYVHVLNQLLPDDIRISAVCLRPPPNFDARFSCVHRHYKYIFNGKNLNIEKMSKAASYFVGERDFRNFCKLDGSKQITNFKRTIISSKILPLSET---------FYCFDLVGSAFLWHQVRCMMAILFLVGQSLEVPEIVLRLTDIEKTPQRPVYEMANDIPLLLYDCKFPEMDWQEPTVDDYKAIKFTTA--TEALTLHYELKAAVCNIFKDV-LPTANTNNFSKTIINLGDGRGK 409

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BLAST of trna pseudouridine synthase 3 vs. SwissProt
Match: gi|82180391|sp|Q5XH16.1|NH2L1_XENLA (RecName: Full=NHP2-like protein 1; AltName: Full=High mobility group-like nuclear protein 2 homolog 1; AltName: Full=U4/U6.U5 small nuclear ribonucleoprotein SNU13; AltName: Full=U4/U6.U5 tri-snRNP 15.5 kDa protein)

HSP 1 Score: 209.92 bits (533), Expect = 6.479e-62
Identity = 98/126 (77.78%), Postives = 112/126 (88.89%), Query Frame = 0

Query: 1025 DGDVNPKAYPLAEQALTTKILNLVQQGVNYKQLRKGANEATKTLNRGQAEFVVMAADAEPLEILLHIPLLCEDKNVPYVFIRSKQALGRACGVSRPVIAASITQNEGSQIKPQITTIQNEIEKLLV 1150
            + +VNPKAYPLA+  LT  +L+LVQQ  NYKQLRKGANEATKTLNRG AEF+VMAADAEPLEI+LH+PLLCEDKNVPYVF+RSKQALGRACGVSRPVIA S+T  EGSQ+KPQI ++Q  IE+LLV
Sbjct:    3 EPEVNPKAYPLADAQLTKTLLDLVQQSANYKQLRKGANEATKTLNRGIAEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKPQIQSVQQAIERLLV 128

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BLAST of trna pseudouridine synthase 3 vs. SwissProt
Match: gi|82186659|sp|Q6P8E9.1|NH2L1_XENTR (RecName: Full=NHP2-like protein 1; AltName: Full=High mobility group-like nuclear protein 2 homolog 1; AltName: Full=U4/U6.U5 small nuclear ribonucleoprotein SNU13; AltName: Full=U4/U6.U5 tri-snRNP 15.5 kDa protein)

HSP 1 Score: 208.764 bits (530), Expect = 1.844e-61
Identity = 97/126 (76.98%), Postives = 112/126 (88.89%), Query Frame = 0

Query: 1025 DGDVNPKAYPLAEQALTTKILNLVQQGVNYKQLRKGANEATKTLNRGQAEFVVMAADAEPLEILLHIPLLCEDKNVPYVFIRSKQALGRACGVSRPVIAASITQNEGSQIKPQITTIQNEIEKLLV 1150
            + +VNPKAYPLA+  LT  +L+LVQQ  NYKQLRKGANEATKTLNRG AEF+VMAADAEPLEI+LH+PLLCEDKNVPYVF+RSKQALGRACGVSRPVIA ++T  EGSQ+KPQI ++Q  IE+LLV
Sbjct:    3 EPEVNPKAYPLADAQLTKTLLDLVQQAANYKQLRKGANEATKTLNRGIAEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACAVTIKEGSQLKPQIQSLQQSIERLLV 128

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BLAST of trna pseudouridine synthase 3 vs. SwissProt
Match: gi|13431749|sp|Q9U3Z7.1|NH2L1_DROME (RecName: Full=NHP2-like protein 1 homolog; AltName: Full=Protein hoi-polloi)

HSP 1 Score: 208.379 bits (529), Expect = 2.127e-61
Identity = 95/124 (76.61%), Postives = 112/124 (90.32%), Query Frame = 0

Query: 1027 DVNPKAYPLAEQALTTKILNLVQQGVNYKQLRKGANEATKTLNRGQAEFVVMAADAEPLEILLHIPLLCEDKNVPYVFIRSKQALGRACGVSRPVIAASITQNEGSQIKPQITTIQNEIEKLLV 1150
            +VNPKA+PLA+  LT KI+NL+QQ +NY QLRKGANEATKTLNRG A+ VV+A DAEP+EILLH+PLLCEDKNVPYVF+RSKQALGRACGVSRP++A S+T NEGSQ+K QIT+IQ EIE+LLV
Sbjct:    4 EVNPKAFPLADAQLTAKIMNLLQQALNYNQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIVACSVTTNEGSQLKSQITSIQQEIERLLV 127

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BLAST of trna pseudouridine synthase 3 vs. SwissProt
Match: gi|74698445|sp|Q9UTB3.1|YL85_SCHPO (RecName: Full=Putative tRNA pseudouridine synthase C25B8.05)

HSP 1 Score: 217.624 bits (553), Expect = 2.233e-60
Identity = 144/437 (32.95%), Postives = 217/437 (49.66%), Query Frame = 0

Query:   37 KNVIKKLTGQTDHGSEAEGQMGSR---------------KRKTPRPFDYTLYKKRHVLLQVAYFGWDYYGFAVQ-EITG-KTIESELFRALLLTRLIESRETSNYHRCGRTDKGVSALKQVVSIDLRSNLLEGKSVFAPEGCRAHERRVPGDERIEIDFCKMLNANLPDHIHVTAWAPCPSLDFSARFDCQLRTYKYFF----PQGSMSLDRINAAGQHLVGSHDYRNFCKLDVGNGVVSYTRRIDRVSAVPVQEAEAEGGEGYRMCALTVVGKAFLWHQIRCIVAVLFRVGEGLEAPSVIQELLDVAKNPSRPQYSMASEMALNLFDCQYEGITWHHSEESLLIVMKRLQALWTE--HEVKATMLKASLCEMQANAQLPSLKHFNRQTE-SLVPNKG-----KSKSYLPLMQMMTCTSLEDKISQTEAKKKRSLID 444
            KN + K   + D+G+E E Q  S+               K K  RPF   L K   V  + AY GW+Y G A Q E T   T+E ++F ALL   LI    + ++ RCGRTDKGVSA+ QV+S+++R                 H  R P      I +C +LN  LP  I +T +A  P   F ARF C+ R YKY F    P GS+ +DR+N A    +G HD+RNFCK+D    + +Y RRI     + +  +         + A  + G AFLWHQ+RC++A+LF +G+ LE  S+I +LLD+ K P++P Y MASE  L L+DC ++ I W    +S     +  +  +    H+  +  ++  +     +    ++K + +  E S   N G     ++K Y+P++      S+E  +     K+K+ L D
Sbjct:   40 KNEVIKNKNKLDNGNEIEPQHLSQELVLQHALQDASSLPKLKPVRPFQ--LEKTVFVAFKFAYCGWNYNGLAYQLEPTPLPTVEGKVFEALLRAHLITDPSSCSFSRCGRTDKGVSAMGQVISLNVR-----------------HSERRP------IIYCDVLNRLLPADIRITGYA-FPPEGFDARFSCKQRHYKYLFTKDYPGGSLDIDRMNEAAALYLGEHDFRNFCKIDASKQITNYHRRILSSKVICIDPSTG-------LYAFDLQGTAFLWHQVRCMMAILFLIGQKLEPASLINDLLDIKKVPTKPIYDMASEYPLILYDCDFDNIEWTLPTDSPTTAPRIAKHTYETIYHQWHSLRIREQIASFMLDIADHNVKRYGKSEESSSTMNVGEGLLKRTKKYIPILSRQRQESVE--VVNERYKRKKGLKD 441

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BLAST of trna pseudouridine synthase 3 vs. SwissProt
Match: gi|2500345|sp|P55769.3|NH2L1_HUMAN (RecName: Full=NHP2-like protein 1; AltName: Full=High mobility group-like nuclear protein 2 homolog 1; AltName: Full=OTK27; AltName: Full=SNU13 homolog; Short=hSNU13; AltName: Full=U4/U6.U5 small nuclear ribonucleoprotein SNU13; AltName: Full=U4/U6.U5 tri-snRNP 15.5 kDa protein; Contains: RecName: Full=NHP2-like protein 1, N-terminally processed >gi|34922622|sp|Q9D0T1.4|NH2L1_MOUSE RecName: Full=NHP2-like protein 1; AltName: Full=Fertilization antigen 1; Short=FA-1; AltName: Full=High mobility group-like nuclear protein 2 homolog 1; AltName: Full=Sperm-specific antigen 1; AltName: Full=U4/U6.U5 small nuclear ribonucleoprotein SNU13; AltName: Full=U4/U6.U5 tri-snRNP 15.5 kDa protein; Contains: RecName: Full=NHP2-like protein 1, N-terminally processed >gi|62512125|sp|P55770.4|NH2L1_RAT RecName: Full=NHP2-like protein 1; AltName: Full=High mobility group-like nuclear protein 2 homolog 1; AltName: Full=OTK27; AltName: Full=U4/U6.U5 small nuclear ribonucleoprotein SNU13; AltName: Full=U4/U6.U5 tri-snRNP 15.5 kDa protein; Contains: RecName: Full=NHP2-like protein 1, N-terminally processed >gi|75075989|sp|Q4R5C6.1|NH2L1_MACFA RecName: Full=NHP2-like protein 1; AltName: Full=High mobility group-like nuclear protein 2 homolog 1; AltName: Full=U4/U6.U5 small nuclear ribonucleoprotein SNU13; AltName: Full=U4/U6.U5 tri-snRNP 15.5 kDa protein; Contains: RecName: Full=NHP2-like protein 1, N-terminally processed >gi|118600939|sp|Q3B8S0.3|NH2L1_BOVIN RecName: Full=NHP2-like protein 1; AltName: Full=High mobility group-like nuclear protein 2 homolog 1; AltName: Full=U4/U6.U5 small nuclear ribonucleoprotein SNU13; AltName: Full=U4/U6.U5 tri-snRNP 15.5 kDa protein; Contains: RecName: Full=NHP2-like protein 1, N-terminally processed)

HSP 1 Score: 198.364 bits (503), Expect = 8.181e-58
Identity = 99/126 (78.57%), Postives = 112/126 (88.89%), Query Frame = 0

Query: 1025 DGDVNPKAYPLAEQALTTKILNLVQQGVNYKQLRKGANEATKTLNRGQAEFVVMAADAEPLEILLHIPLLCEDKNVPYVFIRSKQALGRACGVSRPVIAASITQNEGSQIKPQITTIQNEIEKLLV 1150
            + DVNPKAYPLA+  LT K+L+LVQQ  NYKQLRKGANEATKTLNRG +EF+VMAADAEPLEI+LH+PLLCEDKNVPYVF+RSKQALGRACGVSRPVIA S+T  EGSQ+K QI +IQ  IE+LLV
Sbjct:    3 EADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQIQSIQQSIERLLV 128

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BLAST of trna pseudouridine synthase 3 vs. nr
Match: gi|1325305153|ref|XP_023334180.1| (tRNA pseudouridine(38/39) synthase-like [Eurytemora affinis])

HSP 1 Score: 449.129 bits (1154), Expect = 1.478e-143
Identity = 222/424 (52.36%), Postives = 294/424 (69.34%), Query Frame = 0

Query:   21 EETEEVRKLRLQVLQLKNVIKKLTGQTDHGSEAEGQMGSRKRKTPRPFDYTLYKKRHVLLQVAYFGWDYYGFAVQEITGKTIESELFRALLLTRLIESRETSNYHRCGRTDKGVSALKQVVSIDLRSNLLEGKSVFAPEGCRAHERRVPGDERIEIDFCKMLNANLPDHIHVTAWAPCPSLDFSARFDCQLRTYKYFFPQGSMSLDRINAAGQHLVGSHDYRNFCKLDVGNGVVSYTRRIDRVSAVPVQEAEAEGGEGYRMCALTVVGKAFLWHQIRCIVAVLFRVGEGLEAPSVIQELLDVAKNPSRPQYSMASEMALNLFDCQYEGITWHHSEESLLIVMKRLQALWTEHEVKATMLKASLCEMQANAQLPSLKHFNRQTESLVPNKGKSKSYLPLMQMMTCTSLEDKISQTEAKKKRSLID 444
            E  +++  L + V QL+NVI K        S ++  +     K  R FD++ YK+RHVLL++ YFGWDY+GFAVQE +GKTIESELF AL  T+LIESRE SNYHRCGRTD+GVSA  QVVS+D+R+NL EG+ V+A +        +   +  EID+C +LN NLPD+I VTAWAP  ++ FSARFDCQ RTYKYFFP+G + L R+   GQ+LVGSHD+RNFCK+DV NGVVSYTRR+D +S   V + + +    Y MC LT+VGKA+LWHQIR IV+VLF +GEG E PSV++ELLDV KNP RP Y MA++  LNLF C Y+G+ W++ + SL  V++  Q +W E  VK+ M+++ L +++ +AQ P     + Q + L   K K K Y PL++M  C SLEDKI  T AK+++  ID
Sbjct:   32 ELIQKIISLEVHVQQLRNVIAK-------NSNSDLPVALNAAKKERKFDFSNYKRRHVLLKICYFGWDYHGFAVQEDSGKTIESELFAALHRTKLIESREQSNYHRCGRTDRGVSAFSQVVSLDIRTNLAEGEGVYAQDSYTGSHTNI---KDTEIDYCHILNRNLPDNIKVTAWAPTNTVSFSARFDCQSRTYKYFFPRGLLDLQRMEDGGQNLVGSHDFRNFCKMDVNNGVVSYTRRVDALSVSCVLKEDKDKDSPYDMCVLTIVGKAYLWHQIRLIVSVLFLIGEGKEDPSVVKELLDVEKNPQRPAYGMAADYPLNLFSCDYDGVEWNYDQLSLGFVLRTFQKMWVETNVKSQMIRSCLEDLEKHAQTP----VHAQVDPLFVFK-KEKVYTPLLKMPKCPSLEDKIV-TVAKRRKLDID 439

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BLAST of trna pseudouridine synthase 3 vs. nr
Match: gi|290562699|gb|ADD38745.1| (tRNA pseudouridine synthase 3 [Lepeophtheirus salmonis])

HSP 1 Score: 436.032 bits (1120), Expect = 6.994e-139
Identity = 216/426 (50.70%), Postives = 288/426 (67.61%), Query Frame = 0

Query:   21 EETEEVRKLRLQVLQLKNVIKKLTGQTDHGSEAEGQMGSRKRKTPRPFDYTLYKKRHVLLQVAYFGWDYYGFAVQEITGKTIESELFRALLLTRLIESRETSNYHRCGRTDKGVSALKQVVSIDLRSNLLEGKSVFAPEGCRAHERRVPGDERIEIDFCKMLNANLPDHIHVTAWAPCPSLDFSARFDCQLRTYKYFFPQGSM-SLDRINAAGQHLVGSHDYRNFCKLDVGNGVVSYTRRIDRVSAVPVQEAEAEGGEGYRMCALTVVGKAFLWHQIRCIVAVLFRVGEGLEAPSVIQELLDVAKNPSRPQYSMASEMALNLFDCQYEGITWHHSEESLLIVMKRLQALWTEHEVKATMLKASLCEMQANAQLPSLKHFN----RQTESLVPNKGKSKSYLPLMQMMTCTSLEDKISQTEAKKKRS 441
            E  +E+R+L   VLQL+NVI K         ++  +   R +K  R FD++LYKKR VL Q+ YFGW+Y+GF  QE +  TIE+ LF+ALL T LI+SRETSNYHRCGRTDKGVSA +QV+SID+R+NL EG  VF    C+A  R    D   EID+ K++N+NLP  I + AW P  + + SARFDC+ RTYKYFFP GS+ SL ++N AG  LVGSHD+RNFCK+DV NGV++Y RR+  VS   ++ ++ +    Y +C L V G AFLWHQIRCIV VLF +G+G E P +I ELLD+ KNP RPQY +ASE+ LNLFDC YEG+TW ++ ESL   +K  Q LW EH +KA M+KA L E+++        HF+     Q  +L+P+  K + Y P ++M+ C SLE+KI +   ++KR+
Sbjct:   10 ELIQEIRRLEKHVLQLRNVIAK-------KGDSRDKKIVRHKKKGREFDHSLYKKRKVLFQITYFGWNYHGFTTQEDSCMTIEAHLFKALLTTCLIQSRETSNYHRCGRTDKGVSAFRQVISIDVRTNLKEGIGVFDYPDCKADSR---PDMPHEIDYIKIINSNLPPDIQLIAWTPAQNRELSARFDCKKRTYKYFFPLGSIKSLSKMNEAGAKLVGSHDFRNFCKMDVSNGVLTYIRRMVNVSTSVLEPSKEKESSPYDLCVLKVEGNAFLWHQIRCIVTVLFHIGQGREEPELIDELLDIEKNPCRPQYGLASEIPLNLFDCSYEGLTWDYNLESLRTCIKGFQELWAEHAIKAEMIKACLDELES--------HFDERVIEQASALLPH-SKQRIYTPFLEMLKCPSLEEKIQRLNKRRKRN 416

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BLAST of trna pseudouridine synthase 3 vs. nr
Match: gi|225718836|gb|ACO15264.1| (tRNA pseudouridine synthase 3 [Caligus clemensi])

HSP 1 Score: 429.869 bits (1104), Expect = 1.899e-136
Identity = 227/425 (53.41%), Postives = 291/425 (68.47%), Query Frame = 0

Query:   24 EEVRKLRLQVLQLKNVIKKLTGQTDHGSEAEGQMGSRKRKTPRPFDYTLYKKRHVLLQVAYFGWDYYGFAVQEITGKTIESELFRALLLTRLIESRETSNYHRCGRTDKGVSALKQVVSIDLRSNLLEGKSVFAPEGCRAHERRVPGDERIEIDFCKMLNANLPDHIHVTAWAPCPSLDFSARFDCQLRTYKYFFPQGSM-SLDRINAAGQHLVGSHDYRNFCKLDVGNGVVSYTRRIDRVSAVPVQEAEAEGGEGYRMCALTVVGKAFLWHQIRCIVAVLFRVGEGLEAPSVIQELLDVAKNPSRPQYSMASEMALNLFDCQY--EG-ITWHHSEESLLIVMKRLQALWTEHEVKATMLKASLCEMQANAQLPSLKHFNRQTESLVPNKGKSKSYLPLMQMMTCTSLEDKISQTEAKKKRSLID 444
            EE+R+L+  VLQL+NVI K  G     +E+  +   + R+    FD+ LYK+R VLLQ+ YFGW Y+GFAVQE +  TIE  LF AL  T LI SRETSNYHRCGRTDKGVSA +QVVSI+LRSNLLEG  VF    CRAH R  P     EID+CK+LN+NLP  I V AWAP  + DFSARFDC++R YKY FP G+   L RI  AG  L+GSHD+RNFCK+DV NGV++Y RR+  VS  P+   E+   + Y +  L +VG AFLWHQIRCIV VLF +G+GLE PS+I ELLDV K+P RPQY +ASE+ LNLFDC Y  EG I+W +   SL   +K  Q+LWT+H VKA M++  +C      ++P  +  + Q  SL+P+  K ++Y P ++M+ C SLE+KI +T  K++R LI+
Sbjct:   13 EEIRRLKSHVLQLRNVIAK-RGSALPNTESGKKKRKKGRE----FDFNLYKQRKVLLQICYFGWSYHGFAVQEDSPMTIEGHLFNALSRTCLIRSRETSNYHRCGRTDKGVSAFRQVVSIELRSNLLEGPGVFDYPECRAHSRPNPTTNE-EIDYCKILNSNLPPDIQVIAWAPLTNRDFSARFDCKIREYKYIFPLGAARDLSRIQEAGAKLLGSHDFRNFCKMDVSNGVLTYIRRMLEVSVSPL---ESSSTDSYSLVELKIVGNAFLWHQIRCIVTVLFHIGQGLEEPSLIDELLDVEKHPRRPQYGLASEIPLNLFDCSYGEEGNISWIYEVPSLKATLKGFQSLWTQHAVKARMIR--ICLGVLEERMPG-EVVSEQLASLLPH-SKQRTYTPFLEMLKCPSLEEKI-ETANKRRRKLIE 423

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BLAST of trna pseudouridine synthase 3 vs. nr
Match: gi|919056317|ref|XP_013409956.1| (tRNA pseudouridine(38/39) synthase isoform X2 [Lingula anatina])

HSP 1 Score: 408.683 bits (1049), Expect = 9.094e-128
Identity = 217/434 (50.00%), Postives = 272/434 (62.67%), Query Frame = 0

Query:   19 KLEETEEVRKLRLQVLQLKNVIKKLTGQTDHGSEAEGQMGSRKRKTPRPFDYTLYKKRHVLLQVAYFGWDYYGFAVQEITGKTIESELFRALLLTRLIESRETSNYHRCGRTDKGVSALKQVVSIDLRSNLLEGKSVFAPEGCRAHERRVPGDERIEIDFCKMLNANLPDHIHVTAWAPCPSLDFSARFDCQLRTYKYFFPQGSMSLDRINAAGQHLVGSHDYRNFCKLDVGNGVVSYTRRIDRVSAVPVQEAEAEGGEGYRMCALTVVGKAFLWHQIRCIVAVLFRVGEGLEAPSVIQELLDVAKNPSRPQYSMASEMALNLFDCQYEGITWHHSEESLLIVMKRLQALWTEHEVKATML--------KASLCEMQANAQL-----PSLKHFNRQTESLVPNKGKSKSYLPLMQMMTCTSLEDKISQTEAKKK 439
            K E   ++++L+  V QLKN+I +          AEG+   R RK  RPFD+T Y  RHV L++AY GWDY+GFAVQE T KTIE+ LF AL+ TRLIESR TS YHRCGRTDKGVSAL QV+SIDLR+NLLEG  V   E   AH R  PGD+  EI +  +LN  LP  + V AW P    +FSARF C  R YKY FP+G   +  +N A   L+G HDYRN CK+DVGNGVV+Y RRI      P+        +GY+MC LTVVG+AFLWHQIRCIVAVL  +G+G E   +I ELLDV +NP +PQY+MASE+ L L+DC YEG+ WH+  +     +K LQ LWTE  VK+TML        K  + E Q +  +        K    Q  SLVP   K ++Y PL++   C SLED+I+    ++K
Sbjct:   30 KDELVSQIQQLQAHVTQLKNIIAR--------DRAEGKAKER-RKQQRPFDFTKYNTRHVALKIAYLGWDYHGFAVQEDTDKTIEAALFDALIKTRLIESRATSCYHRCGRTDKGVSALGQVISIDLRTNLLEGVGVKVRENGTAHLR--PGDKVTEIRYVHILNKVLPPELRVLAWTPVDP-EFSARFSCLQRMYKYMFPRGDADIQLMNEAAGKLIGEHDYRNLCKMDVGNGVVNYIRRIISTQVKPLDSR----LDGYQMCELTVVGQAFLWHQIRCIVAVLLLIGQGKERVEIIDELLDVERNPRKPQYTMASEIPLILYDCDYEGLNWHYETDCHEETIKHLQTLWTEQTVKSTMLKRMLDYLEKVKITESQPDGTVREQPWQQYKTVQHQCSSLVPG-NKPRTYKPLLEREVCESLEDRINHYVKRRK 446

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BLAST of trna pseudouridine synthase 3 vs. nr
Match: gi|919056315|ref|XP_013409955.1| (tRNA pseudouridine(38/39) synthase isoform X1 [Lingula anatina])

HSP 1 Score: 408.683 bits (1049), Expect = 1.762e-127
Identity = 218/446 (48.88%), Postives = 279/446 (62.56%), Query Frame = 0

Query:    7 ESSASLQAGPTQKLEETEEVRKLRLQVLQLKNVIKKLTGQTDHGSEAEGQMGSRKRKTPRPFDYTLYKKRHVLLQVAYFGWDYYGFAVQEITGKTIESELFRALLLTRLIESRETSNYHRCGRTDKGVSALKQVVSIDLRSNLLEGKSVFAPEGCRAHERRVPGDERIEIDFCKMLNANLPDHIHVTAWAPCPSLDFSARFDCQLRTYKYFFPQGSMSLDRINAAGQHLVGSHDYRNFCKLDVGNGVVSYTRRIDRVSAVPVQEAEAEGGEGYRMCALTVVGKAFLWHQIRCIVAVLFRVGEGLEAPSVIQELLDVAKNPSRPQYSMASEMALNLFDCQYEGITWHHSEESLLIVMKRLQALWTEHEVKATML--------KASLCEMQANAQL-----PSLKHFNRQTESLVPNKGKSKSYLPLMQMMTCTSLEDKISQTEAKKK 439
            + + +L+A   ++L    ++++L+  V QLKN+I +          AEG+   R RK  RPFD+T Y  RHV L++AY GWDY+GFAVQE T KTIE+ LF AL+ TRLIESR TS YHRCGRTDKGVSAL QV+SIDLR+NLLEG  V   E   AH R  PGD+  EI +  +LN  LP  + V AW P    +FSARF C  R YKY FP+G   +  +N A   L+G HDYRN CK+DVGNGVV+Y RRI      P+        +GY+MC LTVVG+AFLWHQIRCIVAVL  +G+G E   +I ELLDV +NP +PQY+MASE+ L L+DC YEG+ WH+  +     +K LQ LWTE  VK+TML        K  + E Q +  +        K    Q  SLVP   K ++Y PL++   C SLED+I+    ++K
Sbjct:   38 DQNKTLEAKSKEEL--VSQIQQLQAHVTQLKNIIAR--------DRAEGKAKER-RKQQRPFDFTKYNTRHVALKIAYLGWDYHGFAVQEDTDKTIEAALFDALIKTRLIESRATSCYHRCGRTDKGVSALGQVISIDLRTNLLEGVGVKVRENGTAHLR--PGDKVTEIRYVHILNKVLPPELRVLAWTPVDP-EFSARFSCLQRMYKYMFPRGDADIQLMNEAAGKLIGEHDYRNLCKMDVGNGVVNYIRRIISTQVKPLDSR----LDGYQMCELTVVGQAFLWHQIRCIVAVLLLIGQGKERVEIIDELLDVERNPRKPQYTMASEIPLILYDCDYEGLNWHYETDCHEETIKHLQTLWTEQTVKSTMLKRMLDYLEKVKITESQPDGTVREQPWQQYKTVQHQCSSLVPG-NKPRTYKPLLEREVCESLEDRINHYVKRRK 464

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BLAST of trna pseudouridine synthase 3 vs. nr
Match: gi|676467975|ref|XP_009058062.1| (hypothetical protein LOTGIDRAFT_105384 [Lottia gigantea] >gi|556102717|gb|ESO91369.1| hypothetical protein LOTGIDRAFT_105384 [Lottia gigantea])

HSP 1 Score: 389.037 bits (998), Expect = 8.740e-121
Identity = 204/419 (48.69%), Postives = 266/419 (63.48%), Query Frame = 0

Query:   26 VRKLRLQVLQLKNVIKKLTGQTDHGSEAEGQMGSRKRKTPRPFDYTLYKKRHVLLQVAYFGWDYYGFAVQEITGKTIESELFRALLLTRLIESRETSNYHRCGRTDKGVSALKQVVSIDLRSNLLEGKSVFAPEGCRAHERRVPGDERIEIDFCKMLNANLPDHIHVTAWAPCPSLDFSARFDCQLRTYKYFFPQGSMSLDRINAAGQHLVGSHDYRNFCKLDVGNGVVSYTRRIDRVSAVPVQEAEAEGGEGYRMCALTVVGKAFLWHQIRCIVAVLFRVGEGLEAPSVIQELLDVAKNPSRPQYSMASEMALNLFDCQYEGITWHHSEESLLIVMKRLQALWTEHEVKATMLKA---SLCEMQ---ANAQLPSLKHFNRQTESLVPNKGKSKSYLPLMQMMTCTSLEDKISQTEAKK 438
            V++L   V QL+N+I          S+ +     +K++  +PFD+  Y  RHV L+  Y GWDY+GF +QE + KTIE+ LF ALL+ +LIESRETSNYHRCGRTDKGVSA  QV+SIDLR+NLLEG  V   E   A  R   GD   EID+ K++N  LP  I V AWAP P  DFSARF C  RTYKY+FP+G +++D +  A Q L+G HD+RN CK+DV NGVV Y R I             E  +GY MC LTV GKAFLWHQIRCIV VL  VG+G E PS+I ELLD+ K+P +PQY+MAS + L LFDCQYE + W +SEES +  +K LQ +W+++ +K TM+K    SL E Q   ++  +P  K    Q+  L+    K   ++PL+   T  SLE+K+   + +K
Sbjct:   34 VKQLEKHVFQLRNII----------SKQDDNQQVKKKREQKPFDFRRYNTRHVALRFVYLGWDYHGFVIQEDSEKTIENYLFEALLILKLIESRETSNYHRCGRTDKGVSAFGQVISIDLRTNLLEGVGVKVREDGTASSR--SGDCTTEIDYVKIINKLLPKEIRVLAWAPVPE-DFSARFSCIRRTYKYYFPKGHLNVDVMYKASQKLLGEHDFRNLCKMDVNNGVVEYIRNI-----ASTDLKVFESADGYNMCELTVAGKAFLWHQIRCIVGVLILVGQGKEDPSIIDELLDIEKHPRKPQYNMASYIPLVLFDCQYEDVEWIYSEESHINNIKHLQDMWSQNSIKTTMIKRMLDSLGEKQIQNSSGTIPCPK-LPIQSNWLID--IKDSKHIPLLTRPTSESLEEKVKSAKMRK 431

[Close]

BLAST of trna pseudouridine synthase 3 vs. nr
Match: gi|762075915|ref|XP_011444825.1| (PREDICTED: uncharacterized protein LOC105340467 isoform X2 [Crassostrea gigas])

HSP 1 Score: 399.438 bits (1025), Expect = 1.851e-118
Identity = 210/428 (49.07%), Postives = 280/428 (65.42%), Query Frame = 0

Query:   26 VRKLRLQVLQLKNVIKKLTGQTDHGSEAEGQMGSRKRKTPRPFDYTLYKKRHVLLQVAYFGWDYYGFAVQEITGKTIESELFRALLLTRLIESRETSNYHRCGRTDKGVSALKQVVSIDLRSNLLEGKSVFAPEGCRAHERRVPGDERIEIDFCKMLNANLPDHIHVTAWAPCPSLDFSARFDCQLRTYKYFFPQGSMSLDRINAAGQHLVGSHDYRNFCKLDVGNGVVSYTRRI--DRVSAVPVQEAEAEGGEGYRMCALTVVGKAFLWHQIRCIVAVLFRVGEGLEAPSVIQELLDVAKNPSRPQYSMASEMALNLFDCQYEG-ITWHHSEESLLIVMKRLQALWTEHEVKATMLKASLCEM-----QANAQLPSLKHFN----RQTESLVPNKGKSKSYLPLMQMMTCTSLEDKISQTEAKKKRS 441
            VR+L   V QL+NV+  L GQ       EGQ+  +K+   R FD+  Y  RH+ L++ Y GWDY GFA QE T KTIE+ LF ALL T+LIESRETSNYHRCGRTDKGVSA  QV+SID+RSNLLEG  V   E   AHER  PGD+  E+ +C +LN  LP  I   AWA      FSARFDC+ RTYKYFFP+G++++  +  A   L+G HDYRNFCK+DVGNGVV+YTR+I    +SAV       EG EGY++C LT+VG AFLWHQIRCIVA+LF +G+G E P +I +LLDV KNP +PQY+MASE+ LNLFD ++   + W +  +     +K LQ +W +H ++A+M++  L +M     + ++ +      +     Q + +VP+KG  K + PL++   C SLED++     ++K S
Sbjct:  527 VRQLESHVKQLRNVV--LKGQ------GEGQV--KKKAKGREFDFKKYNTRHIALKILYLGWDYQGFAAQEDTDKTIETALFEALLKTKLIESRETSNYHRCGRTDKGVSAFGQVISIDVRSNLLEGTGVKVREDGTAHER--PGDKTSELRYCFLLNKVLPPEIRCLAWAAVDP-KFSARFDCKKRTYKYFFPKGNLNIQMMQEAVDKLIGEHDYRNFCKMDVGNGVVNYTRKIVSAEISAV------DEGEEGYQLCELTIVGLAFLWHQIRCIVALLFMIGQGKERPEIIDDLLDVEKNPRKPQYNMASELPLNLFDAEFAADVEWTYEADWHEENIKHLQQIWAQHIIRASMIRKMLEDMDKAKVETDSDIAPWADLSGPVCSQADWIVPSKG--KIHKPLLERQLCDSLEDRMEHYAKRRKIS 933

[Close]

BLAST of trna pseudouridine synthase 3 vs. nr
Match: gi|762075913|ref|XP_011444818.1| (PREDICTED: uncharacterized protein LOC105340467 isoform X1 [Crassostrea gigas])

HSP 1 Score: 399.438 bits (1025), Expect = 3.095e-118
Identity = 210/428 (49.07%), Postives = 280/428 (65.42%), Query Frame = 0

Query:   26 VRKLRLQVLQLKNVIKKLTGQTDHGSEAEGQMGSRKRKTPRPFDYTLYKKRHVLLQVAYFGWDYYGFAVQEITGKTIESELFRALLLTRLIESRETSNYHRCGRTDKGVSALKQVVSIDLRSNLLEGKSVFAPEGCRAHERRVPGDERIEIDFCKMLNANLPDHIHVTAWAPCPSLDFSARFDCQLRTYKYFFPQGSMSLDRINAAGQHLVGSHDYRNFCKLDVGNGVVSYTRRI--DRVSAVPVQEAEAEGGEGYRMCALTVVGKAFLWHQIRCIVAVLFRVGEGLEAPSVIQELLDVAKNPSRPQYSMASEMALNLFDCQYEG-ITWHHSEESLLIVMKRLQALWTEHEVKATMLKASLCEM-----QANAQLPSLKHFN----RQTESLVPNKGKSKSYLPLMQMMTCTSLEDKISQTEAKKKRS 441
            VR+L   V QL+NV+  L GQ       EGQ+  +K+   R FD+  Y  RH+ L++ Y GWDY GFA QE T KTIE+ LF ALL T+LIESRETSNYHRCGRTDKGVSA  QV+SID+RSNLLEG  V   E   AHER  PGD+  E+ +C +LN  LP  I   AWA      FSARFDC+ RTYKYFFP+G++++  +  A   L+G HDYRNFCK+DVGNGVV+YTR+I    +SAV       EG EGY++C LT+VG AFLWHQIRCIVA+LF +G+G E P +I +LLDV KNP +PQY+MASE+ LNLFD ++   + W +  +     +K LQ +W +H ++A+M++  L +M     + ++ +      +     Q + +VP+KG  K + PL++   C SLED++     ++K S
Sbjct:  553 VRQLESHVKQLRNVV--LKGQ------GEGQV--KKKAKGREFDFKKYNTRHIALKILYLGWDYQGFAAQEDTDKTIETALFEALLKTKLIESRETSNYHRCGRTDKGVSAFGQVISIDVRSNLLEGTGVKVREDGTAHER--PGDKTSELRYCFLLNKVLPPEIRCLAWAAVDP-KFSARFDCKKRTYKYFFPKGNLNIQMMQEAVDKLIGEHDYRNFCKMDVGNGVVNYTRKIVSAEISAV------DEGEEGYQLCELTIVGLAFLWHQIRCIVALLFMIGQGKERPEIIDDLLDVEKNPRKPQYNMASELPLNLFDAEFAADVEWTYEADWHEENIKHLQQIWAQHIIRASMIRKMLEDMDKAKVETDSDIAPWADLSGPVCSQADWIVPSKG--KIHKPLLERQLCDSLEDRMEHYAKRRKIS 959

[Close]

BLAST of trna pseudouridine synthase 3 vs. nr
Match: gi|321464475|gb|EFX75483.1| (hypothetical protein DAPPUDRAFT_323292 [Daphnia pulex])

HSP 1 Score: 380.178 bits (975), Expect = 1.532e-117
Identity = 200/430 (46.51%), Postives = 275/430 (63.95%), Query Frame = 0

Query:   19 KLEETEEVRKLRLQVLQLKNVIKKLTGQTDHGSEAEGQMGSRKRKTPRPFDYTLYKKRHVLLQVAYFGWDYYGFAVQEITGKTIESELFRALLLTRLIESRETSNYHRCGRTDKGVSALKQVVSIDLRSNLLEGKSVFAPEGCRAHERRVPGDERIEIDFCKMLNANLPDHIHVTAWAPCPSLDFSARFDCQLRTYKYFFPQGSMSLDRINAAGQHLVGSHDYRNFCKLDVGNGVVSYTRRIDRVSAVPVQEAEAEGGEGYRMCALTVVGKAFLWHQIRCIVAVLFRVGEGLEAPSVIQELLDVAKNPSRPQYSMASEMALNLFDCQY--EGITWHHSEESLLIVMKRLQALWTEHEVKATMLKASLCEMQANAQLPSLKHFNRQTESLVPNKGKSKSYLPLMQMMTCTSLEDKISQTEAKKKRSLIDVV 446
            K E  + V++L   V+QL+N++K  +    H  +             + FD+  Y KRHVLLQVAY GWDY GF VQE T KTIE+E+F+AL  TRL+ESRETSNYHRCGRTDKGVS+  Q +SIDLRSNL EGK VF P+G   H+ +V     +EID+  +LN  LP  I + AWAP  +   SARFDC+ RTY Y+FP+ +++++R+  A Q L+G HD+RN CK+DVGNGV+ + RRI     + ++  + +    Y M  L ++G+AFLWHQ+RCIVA+LF +G+G E  ++IQELL+V +NP +PQY MASE+ LNLF C Y  +   W +  ESL  V+   Q LW E+ +KATM+K  L  ++             Q + LV    + K+YLPLM+   C SLE++I    AK++R  I+V+
Sbjct:   22 KEELIDRVQQLESHVIQLRNLLKPKSVPEKHEMKQ------------KAFDHKKYAKRHVLLQVAYVGWDYAGFVVQEHTEKTIEAEVFKALEKTRLLESRETSNYHRCGRTDKGVSSFGQAISIDLRSNLSEGKGVFIPDG---HQAKVGNT--VEIDYVGILNKVLPPEIRMIAWAPI-NQSLSARFDCRQRTYHYYFPKANLNIERMRVASQSLIGEHDFRNLCKMDVGNGVIKFDRRI---MDIQIEAIDDDKANSYSMIRLKLIGQAFLWHQVRCIVAILFLIGQGKEETTIIQELLNVERNPRKPQYGMASEIPLNLFTCTYSDDDCQWIYDAESLRYVISGYQTLWAENSIKATMIKEMLNSLEGLLD----DKIESQLKGLVYG-VEPKTYLPLMERQKCESLEERI-HVYAKRQR--IEVI 422

[Close]

BLAST of trna pseudouridine synthase 3 vs. nr
Match: gi|1022777875|gb|KZS21369.1| (tRNA pseudouridine synthase [Daphnia magna])

HSP 1 Score: 377.481 bits (968), Expect = 2.118e-116
Identity = 212/431 (49.19%), Postives = 273/431 (63.34%), Query Frame = 0

Query:   19 KLEETEEVRKLRLQVLQLKNVIK-KLTGQTDHGSEAEGQMGSRKRKTPRPFDYTLYKKRHVLLQVAYFGWDYYGFAVQEITGKTIESELFRALLLTRLIESRETSNYHRCGRTDKGVSALKQVVSIDLRSNLLEGKSVFAPEGCRAHERRVPGDERIEIDFCKMLNANLPDHIHVTAWAPCPSLDFSARFDCQLRTYKYFFPQGSMSLDRINAAGQHLVGSHDYRNFCKLDVGNGVVSYTRRIDRVSAVPVQ-EAEAEGGEGYRMCALTVVGKAFLWHQIRCIVAVLFRVGEGLEAPSVIQELLDVAKNPSRPQYSMASEMALNLFDCQY--EGITWHHSEESLLIVMKRLQALWTEHEVKATMLKASLCEMQANAQLPSLKHFNRQTESLVPNKGKSKSYLPLMQMMTCTSLEDKISQTEAKKKRSLIDV 445
            K E    +++L   V QL+N++  KLT      S  +G      +   + FD+  Y KRHVLLQVAY GWDY GF VQE T KTIE+ELF+AL  TRL+ESRETSNYHRCGRTDKGVS+  Q VS+DLRSNL EGK VF P+G   H+ +V   +  EI +  +LN  LP  I V AWAP      SARFDC+ RTY Y+FP  ++ +  +  A Q+L+G HD+RNFCK+DVGNGV+ + RRI     + +Q EA       Y M  L + G+AFLWHQ+RCIVA+LF VG+G E   +IQELLDV  NP +PQY MASE+ LNLF C Y  E   W +  E+   V+   Q LWTE+ VKATML+  L  ++   +L  +K  N Q + LV +  + K+YLPLM+   C SLE++I+   A  KR  I+V
Sbjct:   23 KEELIARIQQLESHVTQLRNLLNPKLT------SNKQGN-----KPGSKVFDHKKYAKRHVLLQVAYVGWDYAGFVVQEHTEKTIEAELFKALEKTRLVESRETSNYHRCGRTDKGVSSFGQAVSLDLRSNLSEGKGVFVPDG---HQAKVGNTD--EIAYVGILNKVLPPEIRVVAWAPVNK-TLSARFDCRQRTYHYYFPMANLDIQSMRVAAQYLIGEHDFRNFCKMDVGNGVIKFHRRI-----IDIQIEAIDNSANSYSMIRLELKGQAFLWHQVRCIVAILFLVGQGKEEVKIIQELLDVESNPRKPQYGMASEVPLNLFSCTYSDEDCQWIYDAETFQYVISGYQMLWTENIVKATMLREMLDSLE---KLAGIKIEN-QLKGLV-HGIEPKTYLPLMKRQKCESLEERIN---AYAKRQRIEV 423

The following BLAST results are available for this feature:

BLAST of trna pseudouridine synthase 3 vs. L. salmonis genes
BLAST of trna pseudouridine synthase 3 vs. SwissProt
BLAST of trna pseudouridine synthase 3 vs. nr

BLAST of trna pseudouridine synthase 3 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 7


Match Name	E-value	Identity	Description
EMLSAG00000000437	1.175e-137	50.61	supercontig:LSalAtl2s:LSalAtl2s1068:424499:425749:...	[more]
EMLSAG00000009098	4.914e-63	67.82	supercontig:LSalAtl2s:LSalAtl2s572:252815:272447:1...	[more]
EMLSAG00000001319	5.337e-43	29.00	supercontig:LSalAtl2s:LSalAtl2s1223:139819:146383:...	[more]
EMLSAG00000001908	8.508e-37	68.13	supercontig:LSalAtl2s:LSalAtl2s132:388651:388926:-...	[more]
EMLSAG00000008887	1.998e-12	28.45	supercontig:LSalAtl2s:LSalAtl2s554:370357:371198:1...	[more]
EMLSAG00000007406	4.204e-9	35.53	supercontig:LSalAtl2s:LSalAtl2s421:141965:143283:-...	[more]
EMLSAG00000005632	6.205e-8	22.08	supercontig:LSalAtl2s:LSalAtl2s302:2120:5842:1 gen...	[more]

BLAST of trna pseudouridine synthase 3 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|52783242\|sp\|Q9JI38.2\|PUS3_MOUSE	1.304e-99	41.47	RecName: Full=tRNA pseudouridine(38/39) synthase; ...	[more]
gi\|119391067\|sp\|Q3SX07.1\|PUS3_BOVIN	2.499e-98	41.41	RecName: Full=tRNA pseudouridine(38/39) synthase; ...	[more]
gi\|126302589\|sp\|Q9BZE2.3\|PUS3_HUMAN	2.036e-96	41.44	RecName: Full=tRNA pseudouridine(38/39) synthase; ...	[more]
gi\|1353139\|sp\|Q09524.1\|TG124_CAEEL	4.316e-68	35.66	RecName: Full=Probable tRNA pseudouridine synthase...	[more]
gi\|399356\|sp\|P31115.1\|PUS3_YEAST	3.952e-63	35.10	RecName: Full=tRNA pseudouridine(38/39) synthase; ...	[more]
gi\|82180391\|sp\|Q5XH16.1\|NH2L1_XENLA	6.479e-62	77.78	RecName: Full=NHP2-like protein 1; AltName: Full=H...	[more]
gi\|82186659\|sp\|Q6P8E9.1\|NH2L1_XENTR	1.844e-61	76.98	RecName: Full=NHP2-like protein 1; AltName: Full=H...	[more]
gi\|13431749\|sp\|Q9U3Z7.1\|NH2L1_DROME	2.127e-61	76.61	RecName: Full=NHP2-like protein 1 homolog; AltName...	[more]
gi\|74698445\|sp\|Q9UTB3.1\|YL85_SCHPO	2.233e-60	32.95	RecName: Full=Putative tRNA pseudouridine synthase...	[more]
gi\|2500345\|sp\|P55769.3\|NH2L1_HUMAN	8.181e-58	78.57	RecName: Full=NHP2-like protein 1; AltName: Full=H...	[more]

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BLAST of trna pseudouridine synthase 3 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1325305153\|ref\|XP_023334180.1\|	1.478e-143	52.36	tRNA pseudouridine(38/39) synthase-like [Eurytemor...	[more]
gi\|290562699\|gb\|ADD38745.1\|	6.994e-139	50.70	tRNA pseudouridine synthase 3 [Lepeophtheirus salm...	[more]
gi\|225718836\|gb\|ACO15264.1\|	1.899e-136	53.41	tRNA pseudouridine synthase 3 [Caligus clemensi]	[more]
gi\|919056317\|ref\|XP_013409956.1\|	9.094e-128	50.00	tRNA pseudouridine(38/39) synthase isoform X2 [Lin...	[more]
gi\|919056315\|ref\|XP_013409955.1\|	1.762e-127	48.88	tRNA pseudouridine(38/39) synthase isoform X1 [Lin...	[more]
gi\|676467975\|ref\|XP_009058062.1\|	8.740e-121	48.69	hypothetical protein LOTGIDRAFT_105384 [Lottia gig...	[more]
gi\|762075915\|ref\|XP_011444825.1\|	1.851e-118	49.07	PREDICTED: uncharacterized protein LOC105340467 is...	[more]
gi\|762075913\|ref\|XP_011444818.1\|	3.095e-118	49.07	PREDICTED: uncharacterized protein LOC105340467 is...	[more]
gi\|321464475\|gb\|EFX75483.1\|	1.532e-117	46.51	hypothetical protein DAPPUDRAFT_323292 [Daphnia pu...	[more]
gi\|1022777875\|gb\|KZS21369.1\|	2.118e-116	49.19	tRNA pseudouridine synthase [Daphnia magna]	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold403_size186359	supercontig	scaffold403_size186359:152715..159317 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	P:RNA metabolic process

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold403_size186359-processed-gene-0.34-mRNA-1	snap_masked-scaffold403_size186359-processed-gene-0.34-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold403_size186359:152715..159317-

gene from alignment at scaffold403_size186359:152715..159317-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold403_size186359-processed-gene-0.34 ID=snap_masked-scaffold403_size186359-processed-gene-0.34|Name=trna pseudouridine synthase 3|organism=Tigriopus kingsejongensis|type=gene|length=6603bp|location=Sequence derived from alignment at scaffold403_size186359:152715..159317- (Tigriopus kingsejongensis)
ATGGACGTGGAAGCCCCTGAGTCAAGTGCCAGTCTCCAGGCGGGGCCTAC
TCAGAAGCTAGAAGAGACGGAAGAAGTCCGCAAGCTTCGACTTCAGGTGT
TGCAGCTCAAAAATGTGATCAAGAAACTGACCGGACAAACTGACCATGGA
AGTGAAGCCGAGGGCCAAATGGGTTCGAGAAAGCGCAAAACCCCCCGCCC
ATTCGACTACACGCTCTACAAGAAACGTCATGTCCTGCTTCAAGTTGCCT
ACTTCGGATGGGACTACTACGGTTTCGCCGTCCAAGAGATTACCGGGAAA
ACCATCGAAAGTGAGCTCTTTCGCGCTCTTCTCCTAACGCGGCTCATCGA
ATCACGCGAAACCTCCAACTATCACCGATGTGGTCGCACCGATAAGGGCG
TCAGCGCCCTCAAGCAAGTTGTGTCCATCGACCTCCGCTCCAACCTCCTC
GAGGGCAAGAGCGTGTTTGCTCCGGAAGGCTGCCGAGCCCACGAGCGACG
AGTCCCAGGAGATGAACGGATCGAAATCGACTTTTGCAAGATGCTGAACG
CCAACTTGCCGGATCACATCCATGTCACGGCGTGGGCTCCATGTCCGAGT
TTGGACTTCAGTGCCCGCTTCGACTGTCAATTGCGAACATACAAGTACTT
CTTCCCCCAGGGTTCCATGTCCTTGGATCGAATCAACGCCGCCGGGCAGC
ACTTGGTGGGCTCGCATGATTACCGAAACTTTTGCAAGCTAGACGTGGGC
AACGGCGTGGTGAGCTACACGCGACGGATCGACCGAGTGTCCGCCGTTCC
GGTCCAGGAAGCGGAGGCCGAAGGGGGCGAGGGATATCGGATGTGCGCCC
TGACCGTGGTGGGCAAGGCTTTTCTGTGGCATCAAATTCGATGCATTGTG
GCGGTTCTCTTTAGGGTAGGCGAGGGCTTGGAAGCGCCTTCCGTCATCCA
AGAGCTCCTGGACGTGGCCAAGAATCCGTCGCGACCTCAATACAGCATGG
CCTCCGAGATGGCTCTCAATTTGTTCGATTGTCAATATGAAGGCATCACA
TGGCACCACAGCGAAGAGTCGCTCCTCATCGTCATGAAGCGTCTCCAGGC
CCTCTGGACCGAGCACGAGGTAAAGGCCACCATGCTCAAAGCTTCCCTGT
GTGAAATGCAAGCCAACGCTCAGCTGCCATCATTGAAACATTTCAACCGT
CAAACCGAAAGCCTGGTTCCTAACAAAGGCAAAAGCAAGTCGTATCTCCC
ACTGATGCAGATGATGACTTGCACCAGTCTGGAAGACAAAATCAGCCAGA
CGGAGGCCAAGAAGAAGAGATGTGAATGACATTTGTGATGAGGCCCAATA
AACTGGCCGCCTGGACCAAAGTGTTTAAGAGTTGTTAATCTGACCAAGCC
TCGTTAATCAGACATACCCCATCTCGATTTGGGCTAAGCTAAAAGCAAGG
ATTGCCTTCTTTGGGTATTTGAGAGACAATTAGTACGGCTCGGGACGCCT
GAGCTCGTCGCCACTGAGCCGAGGTAGTACCGTATATGGAGGGCCCGTAC
GGTATCCTCTGTGTCCTCGAGAGGACATCCAAATATTGAAATGTCCTCTT
AAAGTCCTCTAGAGGATGAGTTGTGTCCTCGATTTCTTTTGTTGACGGAT
AATGAATGGGTTTAGATGTCACAAATTGGTGCAACATTTTGTCCAAACTT
TGAATATTTTTTCAAAAAATATGTAACAATTGCACTTATGTCTCTCACTT
TTCCCCGACTTATTTTTTTCCACTCTGCGGCCAATTGAGATAGTTTGAAG
TTGGGAAAGGAGAAAAAAATGGCCCGTTTTTCGCAGTCTCGTCCTAGAGA
AAAAAATTGTTTAGAGAGTGCGAAACGACAGGCCAAAATGGCTTTCAGGC
GAAATGAAGCGGCAAAATGTGTGAAAAAGAGGAAAAACTATACGAGTGGA
TTTGCTTAATGTTACCACTCCATTTTTTTGCCATTTTCAATTGAAATTTG
TACTGGATTATGTGATTTCGTAATTTTGGCCCTGAGTAAGGACAATCTCA
TAACTTAGGCCACGAATTTGTAGGTTTGTAGATTGTAGTTTAGGTGAATC
ACTGAAAATATAGTCTACGTAGAAAATGTTGTTCAGCTAAGATGCAGTTT
GTGAGACAAAGTCACCTAAAATGCTACTCGCCGGCTCTGCCGAAATTTTA
TGTTTTGACTAAATCAGGACCAAGTTTTGTGGCCAAGAGCTGTGCATTAT
TATTTAAACTAGCAAAAAGGACGCCCTACGGGCGTCTTTTTCCTAGTTCC
TGCGGAAGGCTATGTTGGGCCTTCGGCCCATCCCCAGCCCATGCTCGGCC
TTTGGCCTAGTTTCACTTCTCGCTCACACTTGTTGGGCCTTCGGCGCATG
CTCGGCCTTCGGCCGAGTTTGGCTCCTCGCACTCGCTTCGAATTTCGCGC
CCGAGCAAAACTTGCCCTCCGGGCGAATGGAGCCGAAAATGTTTTAAAAC
ACACTTTTAAGGTGTTAGGTGTGTAAACTTGAAAATCCAAGAGTGTTAGG
TACTCCTCGGAGGTGGTCTCGAGGTTCCCTGAAAAAATCAGCTCACTCTA
TTCCGCCGATCCTGAGAAAAACGTACGACAGACAAACAGACAATCAGACA
AACAGACAAACAGAATAAGCTCCATTATAGTATAGACAGATACACCATTT
TTTATATCAATAGTAGTACCAGTGTTGTCCTCTATTTGTGCTTCAAAAGC
CTTCATGTGTCCTTATTTTGGATTTTTCACCTTCCTCTTGTATAGAGTAT
ACTAGTACAAAGCCCTGTACGCGCAGTATATGTGGCATCGATCGATGCTT
GCACAGTGTACATATGTAGTTCCCGAAGGAGTTGGTCGCAAGAACAGATG
ATTTGCCACAGCCCTCATTGATGTCGTCTACGAGTCCCTGGAAAGAGGCA
ATTCACAAGTGCTCGATGTAGCTCTCCGCGAACACATTCTGCTGCACGGC
AGCGTGGCCGTCGGTGCCCTTATAAGTGGTGTTAGCGTAAAACACCTGTG
CCTCTTCAACTCTCCTCTTCTAGCTTTCTCATTCTCTCGTGGTAATCACT
TTGATATTTGTCTGAATTTAACTAGGAGCACATCCAAGAAACGATCAGTA
AAGGCGACATATTCTCAGTACTTTCATTGAAAGGCAGGCTCGCGGGCAAA
TTCAGCTGCCCGGATCTCGGACATAGTTATCAGTGTTACAAAAAGCGGAG
AATCACTCGTGTATGCTCCAAATCTCGAAGCTATCTTCCATCCATTCGAG
ATAGGATATGTGGATCAACCGTTTACGTACATTGAGCCTGTGGGTCGCTT
ATCTAGAGCTCATCCTGGCTAAGCCAGAATCTACCACCATTCTCGTAATC
CTTGATGGAATGCGCCATGACTATCTATCGCCCGAAGCCACGCCCAATCT
AAATGCCATGGTGGAGAAAGGTGTTCACATACCCAAGGTGATGCCCATTT
TCCCGGCCATGAAATACCCCAATCTGGCCTCACTCTTGACTGGTGTCTAC
TCGGAGAATCACAACGTCCTCAATTCGGACTCTTACTTTTCTCAAAAGCA
CCAAAGGTTGGTGTTCAAGAATGAAACAGCCTTTTGGGAGGGGATGACAA
AGATGGGAACAATATGGGTGAGTGAAGGTTTGTATTGCCTGCGCAGGTAG
GAGCTTGATTGGGACACTCTCGGTCGTTCTGAATCTAGGAGCTCTTCAAA
AAAAGCCATCCCCGCGGAAAGGTGGGCATCATGGGATTTCCAGAATTGCA
GTGGATCTGGAGCAACCACGAAGACGTTCCCAAGTCTCCACAGAACCAAA
GTCAGGGCCTTCCAAACAATAGAACCCAACGTGACGCACCTGCTTTAGGC
TCCAACTGGAACGTGATGTTGGACACAAGCAAACTCGACGATGCCATGGA
GAGGTTATTTGATTCGGATGGAATAGTATTTGCCACATTCATCTTAAACG
AACCAGGGACCACTGCCCAAGCCATGGGTCCCGATGCAGCGGAGAGTGCT
ATTAAAAGAGTGGATACCATCATTGGCAAGATCCTCGAGTCCGTGGAGGT
CAAAGGCATGAGTCCAACCACCAACATCATTGTCGCCAGTACTCCCGCTT
ATTCGGATGTGGCGGTGAAGAACGTCTTCCAAGTCAAAAACTTTTCTCAG
AGAAAAATGAAGGTGTTTGGCCAATCCCCCATATATCACGTGACTTCAGT
GGAGGCAGGTGGGTGCTCTCTCAATCCGATTACATGCACATGTCCATGCC
CGCCTGGTTTCAAGGATCGAGCGCAAATTGTCCAATAATTCCCTTCCAAT
ATCCTTAGGCGACATTTTGGGCCTTTACACGGATTGTACCAACAGCCAAG
GGGAGCACGGCTTCACGGTCCACAACAGCGATGCGATCCCGGAAAAATGG
CATTACAGAGCCAGTCCGGACGTCCGCGTCAACAACTGGTTCGTTCTGGT
GGCCAAACATGGCTATGGCTTTGCCGAGGACTTTCTTCCCCGTATTGAGC
GACTTCGGAAAGAGTTTGGACGACAAATTCCAGGGTCCTTCCAGGAAATG
ATTTACGGGAGCAACGGATTTGACCCGAATTTTAGTCAAATGCAAACCTC
ATTGGTGGCTATGGGACCGGCCTTCAAGGCTGGCATTCGTGCGCGTCCCA
TCAATCAAAGCCACGATATCACCACGGTGGATGTTTTCCATTTGCTGGGA
CACGCTCTAGGGATCGATTTGCCTGGGGACCGGAATGGCTCTTTGGCTCA
TCAGTTCTTTCTTCTCGCCAATCCACCGGCGGACGGCATTAAGGAGACCT
TTCAGGAGATCGTGAAATACGTCAAGACGCCGGAACATCTCCCCATCACA
GGTGAGGCTCAGTTTTTCCACCCATTGGCTAGAGCCCATGTTCATGCAAC
GTGTGCTTCTTCTTTTAGTTGCGCTTCTCATTGCTGCCACGGTGTTTATG
GTATCGCTGATGTTCATTTTGGCGGCCAGGCGAAGGCACAAGAGACTGCT
CGCTCAGCAGGGATTCAGATACTCGCAAGTGTAAGAAAATACATTCGTAT
GGATGTGTCAACTAGGTCGACCTTACACGCAGTATGCAAGCAGCCGAGGG
AACATCTTTCGCTATTACATTGCAGAAACTACAGTGACCTTGAGTGCACA
GTCGTGCCATGATTGGTTGGGATCTGTACTCGAACTACAGTATATAATTT
GACTTCTTAACCGTCACATTGCCTCTCCAAGGTTAGCCTGATGCGGTCAA
ACATCGTGAACTATATCTGGGACTTTTGATTTGGCTTTGCAGGAGGCACA
ATCGTCGTCTGGATGGCCATCCTGGTGAAGATGACTTGGACAGCTATTTT
GATGCAGATGAGGACGAGGAGCAACGGGGAGACAAACAAGGTTTGCTGGG
CCGGGATACCAATGATGTGGACAAGACTGCTAGCCGACAGTCGACTTCAT
CGGTTTGACGCATTTGGGACCTTGAACATTGTTTAGTTGAGGATTTCGAA
TGTGACTCTGAGTGTTGAGTAAAAGTGTGAATATAGGAATGATCTGGACT
CAAACCAATTGAATCTTGGAGAGTGAAAGTTACCCGTTGCTCGAGGTCCG
AGCCAATATGCTTACGTACTTATTTCTCCAAATAAAAACGACAACCAAAT
TAGCGCAAGCAACATCACGCCGACCTAGGTCCTTTTATTTAGTCATTCAG
CAGATTAATAACTGCTGCCCTCCATAATGGTTTAAGCCATGATTCAAGAA
AGAAATCAAAACCTTTCTTTGGAAATCAAAAATTGCATGCACTAGTAGCA
AAGCATGATCTGAGACAGTATCATCGATTGTCCCGCCACCTAATGAACTT
ATAGGGAAAAAGTAGTTTGAAGTAATTGCAGTAGAAAGGACAATTTTTTC
GTCACCCTGATGAGCACGTGTTTCCTCTCTTGCCGCATGGTAAACAAAAC
AACAATCCCCACACAACGTTGAGGAAGCTCACAGGAAACGGACCCCAAAC
TCGTAGTTTGTTTAAACTATCCCCATCTCCGTGAAGTCTAACGTTGGAGA
CCGAGAGAAAATCATGACGGTAAGCACCGAAGCACAAGTCTGTGATAAAA
GTCATTGGATCTGACCCTCATTTTTCGTACCCACAGGCTGACGGCGACGT
GAACCCCAAGGCTTACCCTCTGGCCGAGCAAGCTCTCACCACCAAGATCC
TGAACCTGGTTCAGCAAGGCGTGAACTACAAGCAGCTCCGCAAGGGTGCC
AACGAAGCCACCAAGACCTTGAACCGCGGCCAGGCCGAATTCGTGGTCAT
GGCTGCCGACGCCGAGCCCTTGGAGATCTTGCTCCACATTCCCCTCTTGT
GCGAGGACAAGAACGTCCCTTACGTCTTTATCCGCTCCAAGCAAGCCTTG
GGACGTGCCTGTGGCGTGTCGCGCCCAGTGATTGCCGCCTCGATCACTCA
AAACGAAGGATCTCAAATCAAGCCCCAAATCACCACCATCCAAAACGAAA
TCGAGAAGCTCTTGGTGTGAATCCCTCTCGCTATGTGGGATACATTATTT
TTT

Synonyms

The feature 'trna pseudouridine synthase 3' has the following synonyms


Synonym
Tk07450

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