carnitine dehydratase, snap_masked-scaffold6762_size3619-processed-gene-0.0 (gene) Tigriopus kingsejongensis

Overview


Name	carnitine dehydratase
Unique Name	snap_masked-scaffold6762_size3619-processed-gene-0.0
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of carnitine dehydratase vs. L. salmonis genes
Match: EMLSAG00000001226 (supercontig:LSalAtl2s:LSalAtl2s11:421277:423175:1 gene:EMLSAG00000001226 transcript:EMLSAT00000001226 description:"maker-LSalAtl2s11-augustus-gene-4.11")

HSP 1 Score: 256.144 bits (653), Expect = 6.224e-80
Identity = 153/382 (40.05%), Postives = 212/382 (55.50%), Query Frame = 0

Query:  243 MELRWPDAVEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPD---TLIYARMTGWGQD-GPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGV--SGKGQVVDAAMVDGVPAMMGLIHGMLAQGK-----WSETRGDNWLDGGAPFYRCY-TCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQ--NDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAAPAPRFSRT-APVSPPAPGAIGGETNQVL-AALGYSESEIAGIVGR 608
            M L+    VE +GL  AP    +LAD GA VI VD         D++ RGK+S+ L+LK  +G +   KL+  S V +E FRPGVME+L L PD       +LIYAR++G+GQ+  P    AGHDINY++L+GAL  +G  +  PVPP+N+V D+GGG +    GI++A+ ER V  SGKGQ++D  +  G       +   L Q K     W   RG+N LD GA FY  Y T   G Y+SVG +EPQF+++LL+K  L    +  Q   DT      +D++A  F  KTR EW  IF   DACV PVL+  E   +  +      I+  G     PAP+ SRT A +S   P  IG  + ++L   LG+++ EI  ++  
Sbjct:    1 MALKGVRVVEMAGLAXAPFTSMILADFGASVIRVDNHPDAVVYPDVSCRGKKSISLNLKSSKGRSIVKKLVNNSDVFLESFRPGVMEKLQLCPDVLTKENPSLIYARLSGYGQEHNPLTYRAGHDINYISLSGALSKIGRVNEKPVPPINIVGDFGGGGLTCAFGIIAALYERSVNSSGKGQIIDCGITQGA----SYLSTWLYQSKNIPHLWGNPRGENVLDTGAHFYEVYETKEPGKYISVGTVEPQFYSILLDKLELYPHEEYPQFGGDT---KKLKDIFASKFRTKTRKEWEEIFSNVDACVTPVLSIDEVSSN-ELTKNNFHISNSGESVPLPAPKLSRTPAQISTIEPLRIGEHSIEILRNTLGFTKGEIDNLISE 374

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BLAST of carnitine dehydratase vs. SwissProt
Match: gi|341940628|sp|O09174.4|AMACR_MOUSE (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-methylacyl-CoA racemase)

HSP 1 Score: 308.916 bits (790), Expect = 9.139e-99
Identity = 169/368 (45.92%), Postives = 228/368 (61.96%), Query Frame = 0

Query:  243 MELRWPDAVEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPD----DCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDG--VVQAAPAPRFSRTAPVSPPAPG--AIGGETNQVLAALGYSESEI 602
            M LR    VE +GL P P  G +LAD GA+V+ V+R  +  E  +   RGKRS+ LDLKR +G+    ++ A + VL+E FR GVME+L LGP+    D P  LIYAR++G+GQ G +++ AGHDINYLAL+G L  +G +   P PPLN++AD+GGG +   LGI+ A+ ER  SG+GQV+D++MV+G   +   +      G W + RG N LDGGAPFY  Y  A G +++VGA+EPQF+ALLL+  GL       Q  +  W   +  +A  FA+KT+ EW  IF+G+DACV PVLTF EA  H H   R + I TDG  +    PAP  SRT P  P A    ++G  T +VL   G+S+ EI
Sbjct:    1 MVLRGVRVVELAGLAPGPFCGMVLADFGAEVVRVNRLGSTGE--NFLARGKRSLALDLKRSQGVTVLRRMCARADVLLEPFRCGVMEKLQLGPETLLQDNPK-LIYARLSGFGQSGIFSKVAGHDINYLALSGVLSKIGRSGENPYPPLNLLADFGGGGLMCTLGIVLALFERTRSGRGQVIDSSMVEGTAYLSSFLWKTQPMGLWKQPRGQNILDGGAPFYTTYKTADGEFMAVGAIEPQFYALLLKGLGLESEELPSQMSSADWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLTFEEALHHQHNRERASFI-TDGEQLPSPRPAPLLSRT-PAVPSAKRDPSVGEHTVEVLREYGFSQEEI 363

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BLAST of carnitine dehydratase vs. SwissProt
Match: gi|13637497|sp|P70473.3|AMACR_RAT (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-arylpropionyl-CoA epimerase; AltName: Full=2-methylacyl-CoA racemase)

HSP 1 Score: 305.834 bits (782), Expect = 1.517e-97
Identity = 171/368 (46.47%), Postives = 225/368 (61.14%), Query Frame = 0

Query:  243 MELRWPDAVEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPD----DCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAA--PAPRFSRTAPVSPPAPG--AIGGETNQVLAALGYSESEI 602
            M LR    +E +GL P P  G +LAD GA+V+ VDR  +   P+ + R GKRS+ LDLKR  G A   ++ A + VL+E FR GVME+L LGP+    D P  LIYAR++G+GQ G +++ AGHDINY+AL+G L  +G +   P PPLN++AD+GGG +   LGIL A+ ER  SG GQV+DA MV+G   +   +    A G W++ RG N LDGGAPFY  Y  A G +++VGA+EPQF+ LLL+  GL       Q     W   +  +A  FARKT+ EW  IF+G+DACV PVLT  EA  H H   R + I TD    A   PAP+ SRT P  P A    ++G  T +VL   G+S+ EI
Sbjct:    1 MALRGVRVLELAGLAPGPFCGMILADFGAEVVLVDRLGSVNHPSHLAR-GKRSLALDLKRSPGAAVLRRMCARADVLLEPFRCGVMEKLQLGPETLRQDNPK-LIYARLSGFGQSGIFSKVAGHDINYVALSGVLSKIGRSGENPYPPLNLLADFGGGGLMCTLGILLALFERTRSGLGQVIDANMVEGTAYLSTFLWKTQAMGLWAQPRGQNLLDGGAPFYTTYKTADGEFMAVGAIEPQFYTLLLKGLGLESEELPSQMSIEDWPEMKKKFADVFARKTKAEWCQIFDGTDACVTPVLTLEEALHHQHNRERGSFI-TDEEQHACPRPAPQLSRT-PAVPSAKRDPSVGEHTVEVLKDYGFSQEEI 364

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BLAST of carnitine dehydratase vs. SwissProt
Match: gi|313104070|sp|Q9UHK6.2|AMACR_HUMAN (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-methylacyl-CoA racemase)

HSP 1 Score: 289.271 bits (739), Expect = 4.451e-91
Identity = 161/368 (43.75%), Postives = 213/368 (57.88%), Query Frame = 0

Query:  243 MELRWPDAVEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINR--RGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPD----DCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGV-VQAAPAPRFSRTAPV-SPPAPGAIGGETNQVLAALGYSESEI 602
            M L+    VE SGL P P    +LAD GA V+ VDR   P    D++R  RGKRS+VLDLK+P G A   +L   S VL+E FR GVME+L LGP+    + P  LIYAR++G+GQ G + + AGHDINYLAL+G L  +G +   P  PLN++AD+ GG +   LGI+ A+ +R  +GKGQV+DA MV+G   +   +        W   RG N LDGGAPFY  Y  A G +++VGA+EPQF+ LL++  GL      +Q     W   +  +A  FA KT+ EW  IF+G+DACV PVLTF E   H H   R + I ++   V   PAP    T  + S      IG  T ++L   G+S  EI
Sbjct:    1 MALQGISVVELSGLAPGPFCAMVLADFGARVVRVDR---PGSRYDVSRLGRGKRSLVLDLKQPRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENP-RLIYARLSGFGQSGSFCRLAGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTGKGQVIDANMVEGTAYLSSFLWKTQKLSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQFYELLIKGLGLKSDELPNQMSMDDWPEMKKKFADVFAEKTKAEWCQIFDGTDACVTPVLTFEEVVHHDHNKERGSFITSEEQDVSPRPAPLLLNTPAIPSFKRDPFIGEHTEEILEEFGFSREEI 364

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BLAST of carnitine dehydratase vs. SwissProt
Match: gi|74620364|sp|Q8J0F0.1|CEFD2_ACRCH (RecName: Full=Isopenicillin N epimerase component 2; Short=IPN epimerase component 2; AltName: Full=Isopenicillin N epimerase acyl-CoA racemase component)

HSP 1 Score: 227.639 bits (579), Expect = 1.508e-67
Identity = 124/300 (41.33%), Postives = 173/300 (57.67%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDC----PDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCA--CGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQ 544
            VE +GL P P  G LLAD GA V+ +D   +P    D+  R K S+ +DLK P        +++ + VLI+ FRPGV+ERLGL P +        L+ AR+TG+ +DG +   AGHDINYLA++G L  +G A   P PP N++ D+ GG    ++GIL A++ R  +G GQVV+A MVDG   +  +         W   RG+N LDGG P+Y  Y      G Y++VGALEP F+ +L+   GL +     + D  +W   R L+   FA +TR EWA +F+G+DACV PVL   E +
Sbjct:   15 VELAGLAPGPFCGMLLADYGASVLRIDGPRSPK--GDVLARNKSSICIDLKHPPSRKVLLSILSRADVLIDPFRPGVLERLGLSPTEVLLKANARLVVARLTGFRRDGKYQDMAGHDINYLAVSGVLAMLGRAGENPFPPANILGDFAGGGAMCVVGILLALVSRDATGLGQVVEANMVDGSAYLATMPRLATKTPFWGSPRGENVLDGGCPWYATYRTKDPGGKYMAVGALEPHFYEVLVRGLGLDKTDLPPREDRANWPRLRALFEAKFAERTRSEWAEVFDGTDACVTPVLEQGELE 312

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BLAST of carnitine dehydratase vs. SwissProt
Match: gi|29840845|sp|Q09618.3|YS74_CAEEL (RecName: Full=CaiB/baiF CoA-transferase family protein ZK892.4)

HSP 1 Score: 187.193 bits (474), Expect = 9.735e-53
Identity = 118/326 (36.20%), Postives = 168/326 (51.53%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDT---LIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRA-PVPPLNMVADYGGGTMFLLLGILSAVIERGVSG-KGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSAR--RDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAAPAPR 569
            VE +GL P P  G +LAD GADV  +D+K  PA    +NR GK    LDLK PE +     L   S VL++ +RPG +E++GL P    +    LI  +++G+GQ G  +Q  GHDINY+AL+G L      +   P PP NM+AD+ GG +    GILSA+  R  +G KG ++D +M +GV  +   +     Q     T       G  P YR Y      +++VGA+EP+F+  L +   +      D  D      +   DL ++ F +KTRD+WA IF+G + CV PVL   E   +     R +   T     A P+PR
Sbjct:   11 VEIAGLAPVPHCGMMLADFGADVTVIDKKN-PAIEQRLNR-GKTMKQLDLKNPEDIKKVRDLCQTSDVLLDPYRPGTLEKMGLDPSTLWNNNKGLIICKISGYGQTGRMSQETGHDINYVALSGMLPTFSGVNATRPWPPANMLADFAGGGLSAAFGILSAIYARSHNGGKGCLLDCSMTEGVAYLSSFVQHYYDQPNLF-TDKYALFSGECPIYRTYKTKDDKFVAVGAVEPKFYQNLFKLLNV------DGRDLFVNPGKITEDLESR-FLQKTRDKWANIFKGQECCVTPVLDIHEVGSYGQHVDRNSFTKTSSNWIANPSPR 326

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BLAST of carnitine dehydratase vs. SwissProt
Match: gi|71152392|sp|Q68FU4.1|SUCHY_RAT (RecName: Full=Succinate--hydroxymethylglutarate CoA-transferase; AltName: Full=SuccinylCoA:glutarate-CoA transferase; Flags: Precursor)

HSP 1 Score: 119.398 bits (298), Expect = 1.103e-27
Identity = 104/375 (27.73%), Postives = 162/375 (43.20%), Query Frame = 0

Query:  260 PLAGQLLADLGADVITVDRKAAPAE-----PTDIN---------RRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDT---LIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSA--RRDL---YAQAFARKTRDEWAAIFEGSDACVAPVLT----FSEAQ-FHPHMAARQTIIATDGVVQAAPAPRFSRTAPVSPPAPGAIGGETNQVLA-ALGYSESEIAGIV 606
            P A   L DLGA+VI V+R  A  +     P  +N          R K+S+ +++K P G+    +L A   V +E + PG +  +GLG  D       ++Y  +TG+GQ GP +  AG+D    A++G +H  G  D  PV P   + D   G +F    I++ +I+R  +GKG  +D  ++    A +  +      G+    R         P+    T    GYL +GA   Q  A+L +   LPE     +  T H     R++L    +  FA +   +W  +FEGS     P+ +    FSEAQ  H  +           +    PA R+S+        P  +G  T  +L   L Y E  I  ++
Sbjct:   54 PFATMNLGDLGAEVIKVERPGAGDDTRSWGPPFVNTESTYFLSVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYADIDKIAPHIVYCSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATG-LFAYGAIMAGLIQRYRTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSIVPYQAFKT--KDGYLVIGAGNNQQFAVLCKILNLPELIDDSKYRTNHLRVQNRKELVKILSARFAEEVTAKWLCLFEGSGIPYGPINSLKDVFSEAQVLHNGLVMEMNHPTVGKISVPGPAVRYSKFKMSEAKPPPLLGQHTRHILKEVLRYDEGVIGELL 425

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BLAST of carnitine dehydratase vs. SwissProt
Match: gi|408360016|sp|Q7TNE1.2|SUCHY_MOUSE (RecName: Full=Succinate--hydroxymethylglutarate CoA-transferase; AltName: Full=SuccinylCoA:glutarate-CoA transferase; Flags: Precursor)

HSP 1 Score: 119.398 bits (298), Expect = 1.223e-27
Identity = 103/375 (27.47%), Postives = 163/375 (43.47%), Query Frame = 0

Query:  260 PLAGQLLADLGADVITVDRKAAPAE-----PTDIN---------RRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDT---LIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSA--RRDL---YAQAFARKTRDEWAAIFEGSDACVAPVLT----FSEAQ-FHPHMAARQTIIATDGVVQAAPAPRFSRTAPVSPPAPGAIGGETNQVLA-ALGYSESEIAGIV 606
            P A   L DLGA+VI V+R  A  +     P  +N          R K+S+ +++K P G+    +L A   V +E + PG +  +GLG +D       +IY  +TG+GQ GP +  AG+D    A++G +H  G  D  PV P   + D   G +F    I++ +++R  +GKG  +D  ++    A +  +      G+    R         P+    T    GYL +GA   Q  A++ +   LPE     +  T H     R++L    +  FA +   +W  +FEGS     P+ +    FSEAQ  H  +           +    PA R+S+        P  +G  T  +L   L Y E  I  ++
Sbjct:   54 PFATMNLGDLGAEVIKVERPGAGDDTRSWGPPFVNTESTYFLSVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYEDIDKIAPHIIYCSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATG-LFAYGAIMAGLLQRYRTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSIVPYQAFKT--KDGYLVIGAGNNQQFAVVCKILNLPELIDDCKYRTNHLRVQNRKELVKILSARFAEEVTAKWLCLFEGSGIPYGPINSLKDVFSEAQVLHNGLVMEMNHPTVGKISVPGPAVRYSKFKMSEAKPPPLLGQHTRHILKEVLRYDEGAIEKLL 425

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BLAST of carnitine dehydratase vs. SwissProt
Match: gi|667467185|sp|A9WGE3.1|SCCT_CHLAA (RecName: Full=Succinyl-CoA--D-citramalate CoA-transferase)

HSP 1 Score: 111.309 bits (277), Expect = 3.903e-25
Identity = 115/385 (29.87%), Postives = 160/385 (41.56%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDR--KAAPAEPTDINR------------RGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDD---CPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMM-GLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPE--------AHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDG-----VVQAAPAPRFSRTAPVSPPAPGAIGGETNQVLA-ALGYSESEIA 603
            +E       P  GQLLAD GA+VI V+   K  P      +R            R K+S+ +DL+ PEG A   +L+    +++E FRPG +E  GLG ++       LI  R++G+GQ GP+   AG      A+ G     G  DR P      + D    T F  LG L A+ +R  SG+GQVVD  + +GV A+M  +I      G   E  G N L   AP    Y  A G +  +GA        L +  G PE         HQA      H +   DL A      T D+   + +        + T  E    PH  ARQ+II         +      PR S T         A+G    ++    LG +E ++A
Sbjct:   16 LELGAFLAGPFCGQLLADFGAEVIKVEPPGKGDPMREWGRHRYKGRTLWWPVLARNKKSITIDLRTPEGQALVKRLVPHVDMVLENFRPGTLEEWGLGWEELHALNPGLIMIRVSGFGQTGPYRDKAGFGSIGEAMGGIRAITGFPDRPPTRIGISIGDSLAAT-FAALGALVALHQRQRSGQGQVVDIGIYEGVLALMESMIPEYQLTGHIRERTG-NILPNVAP-SNIYPTADGSWFVIGANADTIFTRLAQAMGQPELATDPRFATHQARGE---HQAELDDLIAAWTLNYTADQLQVMMDEYGVPAGRIYTAKEMLSDPHFIARQSIIGVHDPDLGEIKMQNVVPRLSATPGGVDWTGPALGQHNREIFTDLLGLTEDDLA 394

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BLAST of carnitine dehydratase vs. SwissProt
Match: gi|71152390|sp|Q9HAC7.2|SUCHY_HUMAN (RecName: Full=Succinate--hydroxymethylglutarate CoA-transferase; AltName: Full=Dermal papilla-derived protein 13; AltName: Full=SuccinylCoA:glutarate-CoA transferase; Flags: Precursor)

HSP 1 Score: 110.923 bits (276), Expect = 8.660e-25
Identity = 96/360 (26.67%), Postives = 156/360 (43.33%), Query Frame = 0

Query:  260 PLAGQLLADLGADVITVDRKAA---------PAEPTDIN-----RRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDT---LIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSA--RRDL---YAQAFARKTRDEWAAIFEGSDACVAPVLT----FSEAQ-FHPHMAARQTIIATDGVVQAAPAPRFSRTAPVSPPAPGAIGGETNQVL 592
            P A   L DLGA+VI V+R  A         P   T+        R K+S+ +++K P+G+    +L A   V +E + PG +  +GLG +D  +    +IY  +TG+GQ GP +Q AG+D    A++G +H  G  +  PV P   + D   G ++    I++ +I++  +GKG  +D  ++    A +  I      G+    R         P+    T    GY+ VGA   Q  A + +   LPE     +  T H     R++L    ++ F  +   +W  +FEGS     P+      F+E Q  H  +           +    PA R+S+        P  +G  T  +L
Sbjct:   63 PFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVGTESTYYLSVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAMGLGYEDIDEIAPHIIYCSITGYGQTGPISQRAGYDAVASAVSGLMHITGPENGDPVRPGVAMTDLATG-LYAYGAIMAGLIQKYKTGKGLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKT--KDGYIVVGAGNNQQFATVCKILDLPELIDNSKYKTNHLRVHNRKELIKILSERFEEELTSKWLYLFEGSGVPYGPINNMKNVFAEPQVLHNGLVMEMEHPTVGKISVPGPAVRYSKFKMSEARPPPLLGQHTTHIL 419

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BLAST of carnitine dehydratase vs. SwissProt
Match: gi|667467188|sp|A9WC39.1|SMTB_CHLAA (RecName: Full=Succinyl-CoA--L-malate CoA-transferase beta subunit >gi|667467189|sp|Q1KLK0.1|SMTB_CHLAU RecName: Full=Succinyl-CoA--L-malate CoA-transferase beta subunit)

HSP 1 Score: 98.2117 bits (243), Expect = 1.013e-20
Identity = 113/390 (28.97%), Postives = 168/390 (43.08%), Query Frame = 0

Query:  259 APLAGQLLADLGADVITVD---------RKAAPAEPTDI-----NRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDT---LIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPP-LNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLI---HGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPE--------------AHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSE-AQF--HPHMAARQTIIATDG------VVQAAPAPRFSRTAPVSPPAPG-AIGGETNQVLAA-LGYSESEI 602
            AP    LL + GADV+ V+         R   P    D        R KRSV L+L+ PEG     +LIA S VL E FRPG +E+ GLG D        LI  R+TG+GQ GP+    G      A+ G  +  G     PV P    +ADY  G ++  +G+L A+  R  +G+GQ +DAA+ + V      +   +GM    K  E  G ++ +   P +  +    G ++++     +  A L    G PE              AH +D N+ V     RD +  +  R      A + E   A   P    ++ A F    H+ AR+ ++A D       ++     P+ S T P S  + G  +G  T +VL   LG  + +I
Sbjct:   24 APFCATLLGEFGADVLKVEHPIGGDALRRFGTPTARGDTLTWLSESRNKRSVTLNLQHPEGARVFKELIAHSDVLCENFRPGTLEKWGLGWDVLSKINPRLIMLRVTGYGQTGPYRDRPGFARIAHAVGGIAYLAGMPKGTPVTPGSTTLADYMTG-LYGCIGVLLALRHREQTGRGQYIDAALYESVFRCSDELVPAYGMYR--KVRERHGSHYNEFACP-HGHFQTKDGKWVAISCATDKLFARLANAMGRPELASSSVYGDQKVRLAHASDVNEIV-----RD-WCSSLTR------AEVLERCYATATPAAPLNDIADFFGDRHVHARRNLVAIDAEDLGETLIMPNVVPKLSET-PGSIRSLGPKLGEHTEEVLKEILGMCDEQI 396

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BLAST of carnitine dehydratase vs. nr
Match: gi|740119357|ref|WP_037968013.1| (CoA transferase [Sulfitobacter guttiformis] >gi|751953233|gb|KIN74146.1| L-carnitine dehydratase/bile acid-inducible protein F [Sulfitobacter guttiformis KCTC 32187])

HSP 1 Score: 587.8 bits (1514), Expect = 0.000e+0
Identity = 285/351 (81.20%), Postives = 307/351 (87.46%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAAPAPRFSRTAPVSPPAPGAIGGETNQVLAALGYSESE 601
            VEFSGLGPAPLAGQLLADLGADVITVDRKA PA+PTD+NRRGKRS+VLDLK  +G+ AA +LIAAS VLIEGFRPGVMERLGLGPDDCP+ LI+ARMTGWGQDGP AQTAGHD+NYLA+TGALHAMGDADRAPVPPLN+VADYGGGTMFLLLGILSAVIERG+SGKGQVVDAAMVDGVPA+MGLIHGMLAQG W E RG NWLDGGAPFYRCY CACGGYLSVGALEPQFHALLLEKAGLP  HQ DQND   W  RR  Y   F+RKTRDEW+ IFEG+DACVAPVLTFSEA  HPHM ARQT IA +G+ QAAPAPRFSR+A   P AP AIG +T+ VL  LGY  +E
Sbjct:   12 VEFSGLGPAPLAGQLLADLGADVITVDRKAEPADPTDVNRRGKRSIVLDLKSVQGVEAAQRLIAASDVLIEGFRPGVMERLGLGPDDCPERLIFARMTGWGQDGPLAQTAGHDLNYLAITGALHAMGDADRAPVPPLNLVADYGGGTMFLLLGILSAVIERGISGKGQVVDAAMVDGVPALMGLIHGMLAQGTWQERRGANWLDGGAPFYRCYICACGGYLSVGALEPQFHALLLEKAGLPSGHQGDQNDASVWGKRRIDYQAVFSRKTRDEWSEIFEGTDACVAPVLTFSEAHLHPHMKARQTFIAPNGIYQAAPAPRFSRSAVPMPNAPTAIGADTDTVLEMLGYDAAE 362

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BLAST of carnitine dehydratase vs. nr
Match: gi|640631234|ref|WP_025059234.1| (CoA transferase [Sulfitobacter donghicola] >gi|659499777|gb|KEJ90837.1| carnitine dehydratase [Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565] >gi|751947166|gb|KIN68114.1| L-carnitine dehydratase/bile acid-inducible protein F [Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565])

HSP 1 Score: 585.104 bits (1507), Expect = 0.000e+0
Identity = 279/346 (80.64%), Postives = 304/346 (87.86%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAAPAPRFSRTAPVSPPAPGAIGGETNQVLAALG 596
            VEFSGLGPAPLAGQLLADLGADVITVDRKAAPA+P+DINRRGKRS+VLDLK   G+ A HKLIA+S VLIEGFRPGVMERLG+GPD C D LIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADR PVPPLNMVADYGGGTMFLLLGILSAVIERG+SGKGQVVDAAMVDGVPAMMGLIH MLAQG+WSE RG NWLDG APFYRCYTC+CGG++SVGALEPQFHA+LLE AGLP  HQ  QNDT HW  R   YA AF +K+RDEWA +F+G+DACVAPVLTFSEAQFHPHMA R++ I+ DG+ Q+APAPRFSR+ P  P  P AIG +T  +LA LG
Sbjct:   11 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPADPSDINRRGKRSIVLDLKTTAGIEAVHKLIASSDVLIEGFRPGVMERLGVGPDTCHDALIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRPPVPPLNMVADYGGGTMFLLLGILSAVIERGISGKGQVVDAAMVDGVPAMMGLIHAMLAQGRWSEERGANWLDGAAPFYRCYTCSCGGFISVGALEPQFHAILLENAGLPVDHQQSQNDTQHWKTRSAQYAHAFFQKSRDEWAEVFDGTDACVAPVLTFSEAQFHPHMAERKSFISPDGITQSAPAPRFSRSMPDDPKTPTAIGADTADILAQLG 356

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BLAST of carnitine dehydratase vs. nr
Match: gi|640621188|ref|WP_025049234.1| (CoA transferase [Sulfitobacter mediterraneus] >gi|751955517|gb|KIN76174.1| L-carnitine dehydratase/bile acid-inducible protein F [Sulfitobacter mediterraneus KCTC 32188])

HSP 1 Score: 543.502 bits (1399), Expect = 0.000e+0
Identity = 266/355 (74.93%), Postives = 298/355 (83.94%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAAPAPRFSRTAPVSPPAPGAIGGETNQVLAALGYSESEIAGI 605
            VEFSGLGPAPLAGQLLAD+GA+VITVDR AA A+PTDINRRGK+S+VL+LK   GL AA +LIAAS VLIEGFRPGVMERLGLGPD CP+TLIYARMTGWGQ+GPW+QTAGHDINYL+LTGALHAMG  D  PVPPLNMVADYGGGTMFL+ GILSA+IERGVSGKGQVVDAAMVDGVPAMMGLIHGM+AQG WS+ RG NWLDGGA FYRCY CA G Y+SVGALEPQF+A+LLEK  LPE  +A QND   W    D +A  FA K RDEWA +F+GSDACVAPVL FSEA  HPHMA RQ+++   G  Q+APAPRFSR+ P  P APGA+G ET+++L  LGYSE EIA +
Sbjct:   12 VEFSGLGPAPLAGQLLADMGAEVITVDRAAASADPTDINRRGKKSIVLNLKTDAGLDAARRLIAASDVLIEGFRPGVMERLGLGPDTCPETLIYARMTGWGQEGPWSQTAGHDINYLSLTGALHAMGAPDAPPVPPLNMVADYGGGTMFLIFGILSAMIERGVSGKGQVVDAAMVDGVPAMMGLIHGMVAQGFWSQDRGANWLDGGAHFYRCYACADGKYISVGALEPQFYAILLEKLNLPEDLRASQNDRKTWPEMSDRFADIFASKDRDEWAKVFDGSDACVAPVLGFSEAPDHPHMAHRQSLVDVGGKTQSAPAPRFSRSQPRPPAAPGAVGAETSEILRRLGYSEQEIAAL 366

[Close]

BLAST of carnitine dehydratase vs. nr
Match: gi|740056854|ref|WP_037906481.1| (CoA transferase [Sulfitobacter mediterraneus] >gi|618762100|gb|KAJ03985.1| carnitine dehydratase [Sulfitobacter mediterraneus])

HSP 1 Score: 541.962 bits (1395), Expect = 0.000e+0
Identity = 267/355 (75.21%), Postives = 297/355 (83.66%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAAPAPRFSRTAPVSPPAPGAIGGETNQVLAALGYSESEIAGI 605
            VEFSGLGPAPLAGQLLAD+GA+VITVDR AAPA+PTDINRRGK+S+VL+LK   GL AA +LIAAS VLIEGFRP VMERLGLGPD CP+TLIYARMTGWGQ+GPW+QTAGHDINYL+LTGALHAMG  D  PVPPLNMVADYGGGTMFL+ GILSA+IERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQG W E R  NWLDGGA FYRCYTCA G Y+SVGALEPQF+A+LLEK  LPE  +A QND   W    D +A  FA K RDEWA +F+GSDACVAPVL FSEA  HPHMA RQ+++   G  Q+APAPRFSR+ P  P APGA+G ET+++L  LGYSE EIA +
Sbjct:   12 VEFSGLGPAPLAGQLLADMGAEVITVDRAAAPADPTDINRRGKKSIVLNLKTDAGLDAARRLIAASDVLIEGFRPCVMERLGLGPDTCPETLIYARMTGWGQEGPWSQTAGHDINYLSLTGALHAMGAPDAPPVPPLNMVADYGGGTMFLIFGILSAMIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGFWVEDRSANWLDGGAHFYRCYTCADGKYVSVGALEPQFYAILLEKLNLPEDLRASQNDRKTWPEMSDRFADIFASKDRDEWAKVFDGSDACVAPVLGFSEAPDHPHMAHRQSLVDVGGKTQSAPAPRFSRSQPRPPAAPGAVGAETSEILRRLGYSEQEIAAL 366

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BLAST of carnitine dehydratase vs. nr
Match: gi|1225739724|ref|WP_093739002.1| (CoA transferase [Sulfitobacter delicatus] >gi|1086546945|emb|SDF21647.1| alpha-methylacyl-CoA racemase [Sulfitobacter delicatus])

HSP 1 Score: 526.168 bits (1354), Expect = 0.000e+0
Identity = 259/353 (73.37%), Postives = 291/353 (82.44%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAAPAPRFSRTAPVSPPAPGAIGGETNQVLAALGYSESEIA 603
            VEFSGLGPAPLAGQLLADLGADV+TVDRKAAPA+PTDINRRGKRSVVL+LK   GL AA +LIAAS VLIEGFRPGVMERLGLGP++C + LIY RMTGWGQ GPWAQTAGHDINYLALTGALHAMG  D+ PVPPLN+VADYGGGTMFLL GILSAVIERGV+GKGQVVDAAMVDGVPAMMGLIH MLAQG W+E R  NWLDG APFYRCYTCA G +++VGALEPQF+A+LLEK GLP  ++  QNDT  W  R   +A+ FA ++RD+WAA F GSDACVAPVL+FSEA  HP MAAR  ++  DGV+Q+  APRF    P  P AP  IG +T+ VLA LG S  ++A
Sbjct:   14 VEFSGLGPAPLAGQLLADLGADVVTVDRKAAPADPTDINRRGKRSVVLNLKSSNGLEAAKRLIAASDVLIEGFRPGVMERLGLGPEECHEKLIYGRMTGWGQTGPWAQTAGHDINYLALTGALHAMGSKDQPPVPPLNLVADYGGGTMFLLFGILSAVIERGVTGKGQVVDAAMVDGVPAMMGLIHSMLAQGAWTEQRASNWLDGAAPFYRCYTCADGKFVAVGALEPQFYAILLEKLGLPIDYRESQNDTATWDVRTAEFAEIFATRSRDDWAAHFYGSDACVAPVLSFSEAPDHPQMAARGNMLRADGVLQSGRAPRFGDAKPQMPAAPRPIGADTDAVLAELGLSAHDLA 366

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BLAST of carnitine dehydratase vs. nr
Match: gi|1056105964|ref|WP_067629479.1| (MULTISPECIES: CoA transferase [Sulfitobacter] >gi|1024459335|gb|KZX91994.1| carnitine dehydratase [Sulfitobacter sp. HI0021] >gi|1024464621|gb|KZX96423.1| carnitine dehydratase [Sulfitobacter sp. HI0027] >gi|1024615730|gb|KZZ00592.1| carnitine dehydratase [Sulfitobacter sp. HI0076])

HSP 1 Score: 525.783 bits (1353), Expect = 0.000e+0
Identity = 260/346 (75.14%), Postives = 285/346 (82.37%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAAPAPRFSRTAPVSPPAPGAIGGETNQVLAALG 596
            VEFSGLGPAPLAGQLLADLGADVITVDRKAAPA+P+DINRRGKRSVV++LK PEG+AA   LIA++ VLIEGFRPGVMERLGLGP +C D LIY RMTGWGQ GPWAQTAGHDINYLALTGALHAMG A   PVPPLNMVADYGGGTMFLL GILSAVIERGV+GKGQVVDAAMVDGVPAMMGLIHGMLAQG W+E R  NWLDG APFYRCYTCA G ++SVGALEPQF+A+LLEK GLP    A QND   W AR   +A  FA +TRD+WAA F G+DACVAPVL+FSEA  HP MAAR  ++  D V+Q+  APRF  TAP  P  P  IG +T+ VLA LG
Sbjct:   16 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPADPSDINRRGKRSVVVNLKTPEGIAAGRALIASADVLIEGFRPGVMERLGLGPTNCSDKLIYGRMTGWGQTGPWAQTAGHDINYLALTGALHAMGSAGAPPVPPLNMVADYGGGTMFLLFGILSAVIERGVTGKGQVVDAAMVDGVPAMMGLIHGMLAQGTWTEERAANWLDGAAPFYRCYTCADGKFISVGALEPQFYAILLEKLGLPADLAASQNDRATWEARTAEFAAIFATRTRDDWAAHFNGTDACVAPVLSFSEAPDHPQMAARGNVVKVDAVLQSGRAPRFGATAPQMPSPPRGIGADTDAVLAELG 361

[Close]

BLAST of carnitine dehydratase vs. nr
Match: gi|1024649645|gb|KZZ23497.1| (carnitine dehydratase [Sulfitobacter sp. HI0082])

HSP 1 Score: 521.161 bits (1341), Expect = 1.810e-179
Identity = 259/346 (74.86%), Postives = 284/346 (82.08%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAAPAPRFSRTAPVSPPAPGAIGGETNQVLAALG 596
            VEFSGLGPAPLAGQLLADLGADVITVDRKAAPA+P+DINRRGKRSVV++LK PEG+AA   LIA++ VLIEGFRPGVMERLGLGP +C D LIY RMTGWGQ GPWAQTAGHDINYLALTGALHAMG A   PVPPLNMVADYGGGTMFLL GILSAVIERGV+GKGQVVDAAMVDGVPAMMGLIHGMLAQG W+E R  NWLDG APFYRCYTCA   ++SVGALEPQF+A+LLEK GLP    A QND   W AR   +A  FA + RD+WAA F GSDACVAPVL+F+EA  HP MAAR  ++  D V+Q+  APRF  TAP  P  P AIG +T+ VLA LG
Sbjct:   16 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPADPSDINRRGKRSVVVNLKTPEGIAAGRALIASADVLIEGFRPGVMERLGLGPTNCSDKLIYGRMTGWGQTGPWAQTAGHDINYLALTGALHAMGSAGAPPVPPLNMVADYGGGTMFLLFGILSAVIERGVTGKGQVVDAAMVDGVPAMMGLIHGMLAQGTWTEERAANWLDGAAPFYRCYTCADEKFISVGALEPQFYAILLEKLGLPADLAASQNDRATWEARTAEFAAIFATRARDDWAAHFGGSDACVAPVLSFAEAPDHPQMAARGNVVKVDAVLQSGRAPRFGATAPQMPSPPRAIGADTDAVLAELG 361

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BLAST of carnitine dehydratase vs. nr
Match: gi|494184592|ref|WP_007118501.1| (CoA transferase [Oceanibulbus indolifex] >gi|161382023|gb|EDQ06432.1| L-carnitine dehydratase/bile acid-inducible protein F [Oceanibulbus indolifex HEL-45])

HSP 1 Score: 516.153 bits (1328), Expect = 2.008e-177
Identity = 261/348 (75.00%), Postives = 290/348 (83.33%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAAPAPRFSRTAPVSPPAPGAIGGETNQVLAALGYS 598
            VEFSGLGPAPLAGQLLADLGADVITVDRKAAPA+P+DINRRGKRSVVL+LK+ EG+AAA  LIA++ VLIEGFRPGVMERLGLGP+ CP+ LIY RMTGWGQ GPWAQTAGHDINYLALTGALHAMG AD  PVPPLNMVADYGGGTMFLLLGILSAVIERGV+GKGQVVDAAMVDGVPAMMGLIHGMLAQ KW+E R  NWLDG APFYRCYTCA G +L+VGALEPQF+A+LL+K  LP  +   QNDT  W AR   +A  FA ++RD+WAA F+GSDACVAPVL FSEA  HP MAAR  ++  DGV+Q+  APRF   AP  P  P AIG +T+ VL  LG +
Sbjct:   16 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPADPSDINRRGKRSVVLNLKKSEGIAAARALIASADVLIEGFRPGVMERLGLGPESCPEILIYGRMTGWGQTGPWAQTAGHDINYLALTGALHAMGSADAPPVPPLNMVADYGGGTMFLLLGILSAVIERGVTGKGQVVDAAMVDGVPAMMGLIHGMLAQNKWTEERAANWLDGAAPFYRCYTCADGKFLAVGALEPQFYAILLDKLDLPAEYATTQNDTATWPARTTEFAAIFATRSRDDWAAHFDGSDACVAPVLRFSEAPDHPQMAARGNVLRVDGVLQSGHAPRFGAGAPEMPSPPRAIGADTDAVLKELGVT 363

[Close]

BLAST of carnitine dehydratase vs. nr
Match: gi|640627384|ref|WP_025055390.1| (CoA transferase [Sulfitobacter noctilucicola] >gi|751942003|gb|KIN62955.1| L-carnitine dehydratase/bile acid-inducible protein F [Sulfitobacter noctilucicola])

HSP 1 Score: 510.375 bits (1313), Expect = 3.565e-175
Identity = 246/353 (69.69%), Postives = 284/353 (80.45%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAAPAPRFSRTAPVSPPAPGAIGGETNQVLAALGYSESEIA 603
            +EFSGLGPAPL GQLLADLGADV+T+DR+ APA+ TDINRRGKRSVVL+LK   GL+AA  L+A   V+IEGFRPGVMERLGLGPD CPDT+IYARMTGWGQDGPW+ TAGHDINYLALTGALHAMGD    PVPP+N+VADYGGGTMFL+ G+L+AVIERGVSGKGQVVDAAMVDGVPAMMGLI+GMLAQG WSE R  NWLDG APFYRCYTCA G ++SVGALEPQF+A+LLEK  +P  +   QND   W+ R   +A+ F R++RD WA +FEG+DAC+APVLTFSEA  H HMAAR+ ++  D V+Q+A APRFSR  P +       G ET  +L  LG S  EIA
Sbjct:   12 IEFSGLGPAPLVGQLLADLGADVVTIDREFAPADKTDINRRGKRSVVLNLKSDAGLSAARLLVAQGDVVIEGFRPGVMERLGLGPDACPDTVIYARMTGWGQDGPWSHTAGHDINYLALTGALHAMGDGGAPPVPPMNLVADYGGGTMFLIFGVLAAVIERGVSGKGQVVDAAMVDGVPAMMGLIYGMLAQGTWSEQRAQNWLDGAAPFYRCYTCADGKFVSVGALEPQFYAILLEKLHMPAEYAVTQNDRSTWAERTREFAEIFVRQSRDAWADLFEGTDACIAPVLTFSEAANHLHMAARKNLVRPDDVLQSATAPRFSRFNPSASQPVTGKGAETQSILEGLGLSAGEIA 364

[Close]

BLAST of carnitine dehydratase vs. nr
Match: gi|1055627606|ref|WP_067268194.1| (CoA transferase [Sulfitobacter sp. HI0054] >gi|1024541097|gb|KZY49281.1| carnitine dehydratase [Sulfitobacter sp. HI0054])

HSP 1 Score: 510.375 bits (1313), Expect = 3.676e-175
Identity = 263/346 (76.01%), Postives = 288/346 (83.24%), Query Frame = 0

Query:  251 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPTDINRRGKRSVVLDLKRPEGLAAAHKLIAASGVLIEGFRPGVMERLGLGPDDCPDTLIYARMTGWGQDGPWAQTAGHDINYLALTGALHAMGDADRAPVPPLNMVADYGGGTMFLLLGILSAVIERGVSGKGQVVDAAMVDGVPAMMGLIHGMLAQGKWSETRGDNWLDGGAPFYRCYTCACGGYLSVGALEPQFHALLLEKAGLPEAHQADQNDTVHWSARRDLYAQAFARKTRDEWAAIFEGSDACVAPVLTFSEAQFHPHMAARQTIIATDGVVQAAPAPRFSRTAPVSPPAPGAIGGETNQVLAALG 596
            VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEP+DINRRGKRSVVL+LK  EG+AAA  LIA++ VLIEGFRPGVMERLGLGPDDCP+ LIY RMTGWGQ GPWAQTAGHDINYLALTGALHAMG AD  PVPPLNMVADYGGGTMFLL GIL+AVIERGV+GKGQVVDAAMVDGVPAMMGLIHGMLAQG W+E R  NWLDG APFYRCYTCA G ++SVGALEPQF+A+LLEK GLP      QND   W AR   ++  FA + RD+WAA F+GSDACVAPVL+FSEA  HP MAAR  ++  DGV+Q+  APRF   AP  P  P AIG +T+ VLA LG
Sbjct:   16 VEFSGLGPAPLAGQLLADLGADVITVDRKAAPAEPSDINRRGKRSVVLNLKAAEGIAAAKALIASADVLIEGFRPGVMERLGLGPDDCPEALIYGRMTGWGQTGPWAQTAGHDINYLALTGALHAMGRADTPPVPPLNMVADYGGGTMFLLFGILAAVIERGVTGKGQVVDAAMVDGVPAMMGLIHGMLAQGAWTEERAANWLDGAAPFYRCYTCADGKFISVGALEPQFYAILLEKLGLPAELAESQNDRTTWEARIAEFSAIFATRARDDWAAHFDGSDACVAPVLSFSEAPDHPQMAARGNVMRVDGVLQSGQAPRFDGAAPQMPSPPRAIGADTDAVLAELG 361

The following BLAST results are available for this feature:

BLAST of carnitine dehydratase vs. L. salmonis genes
BLAST of carnitine dehydratase vs. SwissProt
BLAST of carnitine dehydratase vs. nr

BLAST of carnitine dehydratase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAG00000001226	6.224e-80	40.05	supercontig:LSalAtl2s:LSalAtl2s11:421277:423175:1 ...	[more]

BLAST of carnitine dehydratase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|341940628\|sp\|O09174.4\|AMACR_MOUSE	9.139e-99	45.92	RecName: Full=Alpha-methylacyl-CoA racemase; AltNa...	[more]
gi\|13637497\|sp\|P70473.3\|AMACR_RAT	1.517e-97	46.47	RecName: Full=Alpha-methylacyl-CoA racemase; AltNa...	[more]
gi\|313104070\|sp\|Q9UHK6.2\|AMACR_HUMAN	4.451e-91	43.75	RecName: Full=Alpha-methylacyl-CoA racemase; AltNa...	[more]
gi\|74620364\|sp\|Q8J0F0.1\|CEFD2_ACRCH	1.508e-67	41.33	RecName: Full=Isopenicillin N epimerase component ...	[more]
gi\|29840845\|sp\|Q09618.3\|YS74_CAEEL	9.735e-53	36.20	RecName: Full=CaiB/baiF CoA-transferase family pro...	[more]
gi\|71152392\|sp\|Q68FU4.1\|SUCHY_RAT	1.103e-27	27.73	RecName: Full=Succinate--hydroxymethylglutarate Co...	[more]
gi\|408360016\|sp\|Q7TNE1.2\|SUCHY_MOUSE	1.223e-27	27.47	RecName: Full=Succinate--hydroxymethylglutarate Co...	[more]
gi\|667467185\|sp\|A9WGE3.1\|SCCT_CHLAA	3.903e-25	29.87	RecName: Full=Succinyl-CoA--D-citramalate CoA-tran...	[more]
gi\|71152390\|sp\|Q9HAC7.2\|SUCHY_HUMAN	8.660e-25	26.67	RecName: Full=Succinate--hydroxymethylglutarate Co...	[more]
gi\|667467188\|sp\|A9WC39.1\|SMTB_CHLAA	1.013e-20	28.97	RecName: Full=Succinyl-CoA--L-malate CoA-transfera...	[more]

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BLAST of carnitine dehydratase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|740119357\|ref\|WP_037968013.1\|	0.000e+0	81.20	CoA transferase [Sulfitobacter guttiformis] >gi\|75...	[more]
gi\|640631234\|ref\|WP_025059234.1\|	0.000e+0	80.64	CoA transferase [Sulfitobacter donghicola] >gi\|659...	[more]
gi\|640621188\|ref\|WP_025049234.1\|	0.000e+0	74.93	CoA transferase [Sulfitobacter mediterraneus] >gi\|...	[more]
gi\|740056854\|ref\|WP_037906481.1\|	0.000e+0	75.21	CoA transferase [Sulfitobacter mediterraneus] >gi\|...	[more]
gi\|1225739724\|ref\|WP_093739002.1\|	0.000e+0	73.37	CoA transferase [Sulfitobacter delicatus] >gi\|1086...	[more]
gi\|1056105964\|ref\|WP_067629479.1\|	0.000e+0	75.14	MULTISPECIES: CoA transferase [Sulfitobacter] >gi\|...	[more]
gi\|1024649645\|gb\|KZZ23497.1\|	1.810e-179	74.86	carnitine dehydratase [Sulfitobacter sp. HI0082]	[more]
gi\|494184592\|ref\|WP_007118501.1\|	2.008e-177	75.00	CoA transferase [Oceanibulbus indolifex] >gi\|16138...	[more]
gi\|640627384\|ref\|WP_025055390.1\|	3.565e-175	69.69	CoA transferase [Sulfitobacter noctilucicola] >gi\|...	[more]
gi\|1055627606\|ref\|WP_067268194.1\|	3.676e-175	76.01	CoA transferase [Sulfitobacter sp. HI0054] >gi\|102...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold6762_size3619	supercontig	scaffold6762_size3619:318..2242 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold6762_size3619-processed-gene-0.0-mRNA-1	snap_masked-scaffold6762_size3619-processed-gene-0.0-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold6762_size3619:318..2242+

gene from alignment at scaffold6762_size3619:318..2242+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold6762_size3619-processed-gene-0.0 ID=snap_masked-scaffold6762_size3619-processed-gene-0.0|Name=carnitine dehydratase|organism=Tigriopus kingsejongensis|type=gene|length=1925bp|location=Sequence derived from alignment at scaffold6762_size3619:318..2242+ (Tigriopus kingsejongensis)
ATGCCGGAGATGGTGCCGCTGTACGAAGAGTTGTGCGAACTGGCAGGTGG
CGGCGATCACGCCGCGCGGTTCCTGAGTTTTTACACCCCGCCGCCCTATC
TGGCGAGCTGTTCGCAGGCCGTCTGGGGCGGCAAGCAACCCGTTCTTGTG
CGCAATTACGACTACAACCCCCGGGCCTTCTACAGCCTTGTGCTGCGCAC
CAAATGGATGGGGCGTGCGGTGATGGGCACGTCTGACGGTCTGTGGGGGC
TGGTGGACGGGGTGAACGACAAGGGGCTGTCAATCTCGCTCACGTTCGGC
GGGCGGCGTGTGGTGGGTGAAGGGTTCGGCGTGCCGCTGATCCTGCGCTA
TGTGCTGCAAACTTGCGAAACGGCGGAACATGCGGGCGAGGTATTGGCCC
GCGTGCCTACGCACATGAGCTATAACGTGACCGTGCTGGACAGAAAGCGG
ACCTACCTGACGGTCATGATGTCGCCGGACCGGCCCGCGATTGTGACAAA
TGCGGCGGTGGCCACGAACCATCAGGAAAACGTTGAATGGATCAGCCACG
CGCGGTTTACATCTACGGTCGAGCGCGAGCGCTTCTTGCTGCAACGGTTG
CGTCTGCACCGTGATCCGGAAGAGAAGTTCATCAACGCGTTTTTGCGGCC
GCCACTCTATTCCACGGCGTTCCGGCACGGGTTTGGCACGCTCTATACGG
CGGTTTACAGACCTCGCAAGCAAGAGATGGAGTTGCGGTGGCCTGATGTA
ATCTGGCCGCTGTCGTTGAAAGAATTTGTTGAAGGGGCGCGTGAAGTGAC
CCTGCCGGGAGTTATATAATGTCGGGACCGTTAGCATCGTTGAAGGCGGT
TGAGTTTTCGGGCCTTGGCCCCGCGCCGCTGGCCGGGCAGTTGCTGGCCG
ATCTGGGGGCGGATGTGATCACCGTTGATCGCAAGGCAGCGCCTGCGGAG
CCGACGGATATCAACCGCCGTGGCAAACGCTCGGTTGTGCTGGATCTCAA
GCGGCCAGAGGGGCTGGCGGCGGCGCACAAGCTGATTGCGGCCAGTGGTG
TGTTGATCGAAGGGTTCCGTCCCGGCGTGATGGAGCGGTTGGGCCTCGGG
CCTGATGACTGCCCCGATACGCTGATCTATGCGCGGATGACCGGCTGGGG
ACAGGACGGGCCATGGGCGCAGACGGCAGGGCACGACATTAACTATCTGG
CGCTGACAGGCGCGCTGCACGCCATGGGCGATGCCGACCGCGCGCCTGTG
CCGCCGCTGAACATGGTCGCTGACTACGGCGGGGGCACGATGTTTCTGCT
ACTGGGTATCCTGAGCGCTGTGATCGAGCGCGGCGTGTCCGGTAAGGGGC
AGGTGGTCGATGCGGCGATGGTTGACGGGGTGCCTGCGATGATGGGCCTG
ATCCACGGGATGCTGGCGCAGGGAAAGTGGAGCGAGACGCGTGGCGACAA
CTGGCTGGACGGCGGCGCGCCGTTCTACCGGTGCTATACTTGCGCTTGCG
GTGGCTATCTCTCGGTTGGGGCGTTGGAGCCCCAATTTCATGCGCTACTG
CTGGAGAAGGCGGGGCTGCCGGAGGCACATCAGGCGGACCAGAACGACAC
AGTTCATTGGTCTGCGCGGCGTGACCTCTATGCGCAGGCTTTTGCGCGCA
AGACACGCGATGAATGGGCGGCAATTTTTGAGGGCAGTGATGCCTGTGTG
GCGCCTGTTTTGACGTTCTCGGAGGCGCAATTCCATCCGCATATGGCCGC
GCGGCAGACAATTATTGCGACGGACGGTGTTGTGCAGGCCGCCCCTGCGC
CCCGATTTAGCAGGACCGCGCCCGTTTCACCTCCCGCGCCGGGAGCCATT
GGAGGTGAAACAAATCAGGTGCTTGCAGCGTTAGGATATAGCGAGAGCGA
GATTGCCGGAATCGTAGGCCGGTGA

Synonyms

The feature 'carnitine dehydratase' has the following synonyms


Synonym
Tk08166

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