ras-related protein rab-5c, snap_masked-scaffold71_size417697-processed-gene-3.3 (gene) Tigriopus kingsejongensis

Overview


Name	ras-related protein rab-5c
Unique Name	snap_masked-scaffold71_size417697-processed-gene-3.3
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of ras-related protein rab-5c vs. L. salmonis genes
Match: EMLSAG00000011153 (supercontig:LSalAtl2s:LSalAtl2s759:225438:227635:-1 gene:EMLSAG00000011153 transcript:EMLSAT00000011153 description:"maker-LSalAtl2s759-augustus-gene-2.13")

HSP 1 Score: 307.76 bits (787), Expect = 5.313e-108
Identity = 155/205 (75.61%), Postives = 174/205 (84.88%), Query Frame = 0

Query:    1 MSSGVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQ 205
            MSS     G  A+    R+ QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYD+TNQD+F RAKNWVKELQRQA  +IVIALAGNK+DL  KRLV YEEA  YAEENGLLFMETSAK A NVN++FL IA++LP++ ++++    SGG R+  +GQ
Sbjct:    1 MSSTGRPGGGGASSGGGRICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTICLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDVTNQDSFIRAKNWVKELQRQASPNIVIALAGNKADLNTKRLVIYEEAQTYAEENGLLFMETSAKTALNVNDVFLEIAKKLPKDGDSSNV--QSGGQRL-TNGQ 202

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BLAST of ras-related protein rab-5c vs. L. salmonis genes
Match: EMLSAG00000001458 (supercontig:LSalAtl2s:LSalAtl2s1248:131241:136261:1 gene:EMLSAG00000001458 transcript:EMLSAT00000001458 description:"maker-LSalAtl2s1248-augustus-gene-0.13")

HSP 1 Score: 172.94 bits (437), Expect = 7.583e-55
Identity = 83/195 (42.56%), Postives = 122/195 (62.56%), Query Frame = 0

Query:   22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACC 216
            FKL+L+G+S VGKS L+LRF    + E   STIG  F  +T+ LD  T+K +IWDTAGQER+ ++   YYRGA   IVVYD+T+QD+F   K W++E+ R A  ++   L GNK DL  K++V+Y  A  YA++  + F+E SAKNA NV + F+ +A ++       + +G SG V++ +   ++  G    CC
Sbjct:    9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIDRYACENVNKLLVGNKCDLTTKKVVDYTTAKEYADQLNMPFLEASAKNATNVEQAFMTMAAEIKNRVGPPAPSGPSGQVKIDSTPVSSKSGT--GCC 201

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BLAST of ras-related protein rab-5c vs. L. salmonis genes
Match: EMLSAG00000002040 (supercontig:LSalAtl2s:LSalAtl2s136:216604:221557:1 gene:EMLSAG00000002040 transcript:EMLSAT00000002040 description:"maker-LSalAtl2s136-augustus-gene-2.7")

HSP 1 Score: 166.392 bits (420), Expect = 4.064e-52
Identity = 79/192 (41.15%), Postives = 126/192 (65.62%), Query Frame = 0

Query:   10 AAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGA--SGGVR 199
            A +   +N + +FKLV LGE +VGK+SL+ RF+   F    ++TIG  FL++T+ L+D TV+ ++WDTAGQER+ SL P Y R +  A+VVYD TN ++F +   W+ +++ +  +D++I L GNK+DL++KR V  E+    A+E  ++F+ETSAK   NV  +F  +A  LP    +++  GA  +GG++
Sbjct:    2 AXSGEXSNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDTTNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSEKRQVPTEDGERKAKELNVMFIETSAKAGYNVKLLFRRVAAXLPGMDSSSADQGANTTGGLK 193

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BLAST of ras-related protein rab-5c vs. L. salmonis genes
Match: EMLSAG00000003241 (supercontig:LSalAtl2s:LSalAtl2s178:231454:232215:-1 gene:EMLSAG00000003241 transcript:EMLSAT00000003241 description:"augustus_masked-LSalAtl2s178-processed-gene-2.6")

HSP 1 Score: 150.984 bits (380), Expect = 3.396e-46
Identity = 74/158 (46.84%), Postives = 101/158 (63.92%), Query Frame = 0

Query:   19 MSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQA-RADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIF 175
            ++  KL+++GES VGKSSL+LRF +  F     +TIG  F  +TL +    VK  IWDTAGQER+ +L P YYRG Q AI+VYD+TN+D+F+  +NW+ EL   A   DIV  L GNK DL +KR +  EE    A ++ ++F+E+SAK    V   F
Sbjct:    7 LTSLKLLIIGESGVGKSSLLLRFTEDAFDPDHSATIGVDFKVKTLTVQGNRVKLAIWDTAGQERFRTLTPSYYRGGQGAILVYDVTNRDSFSNVENWLNELDTYATNHDIVKMLVGNKCDLEEKRAISKEEGQKCARKHRMMFIESSAKTREGVQLAF 164

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BLAST of ras-related protein rab-5c vs. L. salmonis genes
Match: EMLSAG00000009511 (supercontig:LSalAtl2s:LSalAtl2s612:149458:156023:-1 gene:EMLSAG00000009511 transcript:EMLSAT00000009511 description:"maker-LSalAtl2s612-snap-gene-1.42")

HSP 1 Score: 150.214 bits (378), Expect = 1.953e-43
Identity = 72/166 (43.37%), Postives = 105/166 (63.25%), Query Frame = 0

Query:   22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERE 187
            FKL+L+G+S VGK+ ++ RF +  F+    STIG  F  +T+ LD   +K +IWDTAGQER+ ++   YYRGA   ++VYDITN  +F   KNW++ ++  A AD+   + GNK D+  +R V  E+    A E G+ FMETSAK++ NV E F  +AR +  + E
Sbjct:   50 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKNWIRNIEEHASADVEKMILGNKCDINDRRKVTKEKGEDLAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKME 215

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BLAST of ras-related protein rab-5c vs. L. salmonis genes
Match: EMLSAG00000001628 (supercontig:LSalAtl2s:LSalAtl2s128:1093888:1095612:1 gene:EMLSAG00000001628 transcript:EMLSAT00000001628 description:"augustus_masked-LSalAtl2s128-processed-gene-11.3")

HSP 1 Score: 139.428 bits (350), Expect = 2.213e-42
Identity = 63/124 (50.81%), Postives = 88/124 (70.97%), Query Frame = 0

Query:   22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVE 145
            FK+VLLGE  VGK+S VLR+V  QF+E   +T+ A+FL + L +    V   IWDTAGQER+H+L P+YYR A  AI+VYDIT+ D+F + K W+KEL++     I++ + GNK+D+ +KR VE
Sbjct:   14 FKIVLLGEGCVGKTSCVLRYVDDQFNERHITTLQASFLNKRLNVRGKRVNLSIWDTAGQERFHALGPIYYRDANGAILVYDITDLDSFRKVKVWIKELRKMLGNKIILVIVGNKTDIEEKRHVE 137

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BLAST of ras-related protein rab-5c vs. L. salmonis genes
Match: EMLSAG00000003190 (supercontig:LSalAtl2s:LSalAtl2s1770:8657:11199:-1 gene:EMLSAG00000003190 transcript:EMLSAT00000003190 description:"augustus_masked-LSalAtl2s1770-processed-gene-0.0")

HSP 1 Score: 132.109 bits (331), Expect = 1.249e-38
Identity = 65/175 (37.14%), Postives = 99/175 (56.57%), Query Frame = 0

Query:    1 MSSGVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIF 175
            M+S   ++    A   N    FKL+++G S+VGK+S + R+    F     ST+G  F  +T+   D  VK +IWDTAGQERY ++   YYRGA   I++YD+TN+D+F    +W  +++  +  +  + L GNK D+  +R++ +E     A+  GL F ETSAK   NV   F
Sbjct:    1 MASSQGQTWQKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNHVHDWCTQIKTYSWDNAQVILVGNKCDMEDERVISFERGKQLADSLGLEFFETSAKENINVRAXF 175

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BLAST of ras-related protein rab-5c vs. L. salmonis genes
Match: EMLSAG00000012618 (supercontig:LSalAtl2s:LSalAtl2s94:53587:63698:1 gene:EMLSAG00000012618 transcript:EMLSAT00000012618 description:"maker-LSalAtl2s94-augustus-gene-0.17")

HSP 1 Score: 134.42 bits (337), Expect = 1.398e-37
Identity = 73/209 (34.93%), Postives = 120/209 (57.42%), Query Frame = 0

Query:   17 NRMSQ----FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQL---PRERETASATGASGGV-RVGADGQANGGGKLGACCK 217
            NRM      FK+VL+G + VGK+ LV +  +G F   Q +TIG  F+ +TL +    +K +IWDTAGQER  S+   YYR A A I+V+D++NQ TF     W++E++  A   ++  L GNK+D   + + E E    +A+   + ++ETSAK+ +NV  +F+ IA++L    + +E  S + ++  + + G+  + N       CC+
Sbjct:  230 NRMEDYKYLFKVVLVGNAGVGKTCLVRQXTQGMFPPGQGATIGVDFMIKTLEIQGEKIKLQIWDTAGQERXRSITQSYYRSAHALILVFDVSNQPTFDSCPEWLREIEEYASPKVLKVLVGNKTDRDDREIPE-EIGEDFAQRYSMYYLETSAKSCDNVERLFVEIAQELLQQAKSKELPSYSNSAQQILQPGSSSEVN-----KKCCQ 432

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BLAST of ras-related protein rab-5c vs. L. salmonis genes
Match: EMLSAG00000000624 (supercontig:LSalAtl2s:LSalAtl2s109:73593:97815:1 gene:EMLSAG00000000624 transcript:EMLSAT00000000624 description:"maker-LSalAtl2s109-augustus-gene-1.21")

HSP 1 Score: 134.035 bits (336), Expect = 2.145e-36
Identity = 69/168 (41.07%), Postives = 102/168 (60.71%), Query Frame = 0

Query:   21 QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTV-KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQAR-ADIVIALAGNKSDLAQK----RLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQL 182
            QF+L+L+G+S VGKSSL+  F  G F E  + T+G  F  + L + D  V K  +WDTAGQER+ S+   YYR   AA+++YD+ N+D+FT   NW+ E  +    +  V  L G K D+A+     R V  EEA  +AE +GL F+ETSA+  +NV+  F  + +++
Sbjct: 1464 QFRLILIGDSTVGKSSLLKYFTDGSFGEVSDPTVGIDFFAKLLPVKDGNVMKLLLWDTAGQERFRSITRSYYRNTVAALLIYDVCNRDSFTHIPNWMHEAGKHMEPSKCVFILVGCKYDMAENNPGVREVPTEEARTFAELHGLQFLETSARTGHNVDNAFRLLTQEI 1631

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BLAST of ras-related protein rab-5c vs. L. salmonis genes
Match: EMLSAG00000005149 (supercontig:LSalAtl2s:LSalAtl2s272:1903:7665:1 gene:EMLSAG00000005149 transcript:EMLSAT00000005149 description:"snap_masked-LSalAtl2s272-processed-gene-0.5")

HSP 1 Score: 123.635 bits (309), Expect = 1.241e-35
Identity = 68/163 (41.72%), Postives = 94/163 (57.67%), Query Frame = 0

Query:   22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPR 184
            FK+VL+G+S VGK  L+  +           T+G   +      D  TVK +IWDTAGQERY ++   YYRGA  A++VYDI    T+     W++EL+  A ++IVI L GNK DL   R V  +EA  +AE+N L F+ETSA ++ NV   F  I  ++ R
Sbjct:   12 FKVVLIGDSGVGKMILLCTY-----------TVGEKIV------DGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGNKCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYR 157

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BLAST of ras-related protein rab-5c vs. SwissProt
Match: gi|38258923|sp|P51148.2|RAB5C_HUMAN (RecName: Full=Ras-related protein Rab-5C; AltName: Full=L1880; AltName: Full=RAB5L >gi|75054865|sp|Q5R7L7.1|RAB5C_PONAB RecName: Full=Ras-related protein Rab-5C)

HSP 1 Score: 322.013 bits (824), Expect = 6.205e-112
Identity = 161/213 (75.59%), Postives = 176/213 (82.63%), Query Frame = 0

Query:    4 GVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACC 216
            G  R    AAG  N++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN DTF RAKNWVKELQRQA  +IVIALAGNK+DLA KR VE++EA AYA++N LLFMETSAK A NVNEIF+AIA++LP+  E  +ATGA G  R G D Q N       CC
Sbjct:    6 GAARPNGPAAG--NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKN-EPQNATGAPGRNR-GVDLQENNPASRSQCC 214

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BLAST of ras-related protein rab-5c vs. SwissProt
Match: gi|75052596|sp|Q58DS9.1|RAB5C_BOVIN (RecName: Full=Ras-related protein Rab-5C)

HSP 1 Score: 321.627 bits (823), Expect = 1.038e-111
Identity = 161/213 (75.59%), Postives = 175/213 (82.16%), Query Frame = 0

Query:    4 GVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACC 216
            G  R    AAG  N++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN DTF RAKNWVKELQRQA  +IVIALAGNK+DLA KR VE++EA AYAE+N LLFMETSAK A NVNEIF+AIA++LP+  E  +A GA G  R G D Q N       CC
Sbjct:    6 GAARPNGPAAG--NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKLPKN-EPQNAAGAPGRNR-GVDLQENNPASRSQCC 214

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BLAST of ras-related protein rab-5c vs. SwissProt
Match: gi|38258917|sp|P35278.2|RAB5C_MOUSE (RecName: Full=Ras-related protein Rab-5C)

HSP 1 Score: 319.701 bits (818), Expect = 5.430e-111
Identity = 159/213 (74.65%), Postives = 175/213 (82.16%), Query Frame = 0

Query:    4 GVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACC 216
            G  R    AAG  N++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN DTF RAKNWVKELQRQA  +IVIALAGNK+DLA KR VE++EA AYA++N LLFMETSAK A NVNEIF+AIA++LP+  E  +A GA G  R G D Q +       CC
Sbjct:    6 GAARPNGPAAG--NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKN-EPQNAAGAPGRTR-GVDLQESNPASRSQCC 214

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BLAST of ras-related protein rab-5c vs. SwissProt
Match: gi|1710027|sp|P51147.1|RAB5C_CANFA (RecName: Full=Ras-related protein Rab-5C)

HSP 1 Score: 318.546 bits (815), Expect = 1.589e-110
Identity = 159/213 (74.65%), Postives = 174/213 (81.69%), Query Frame = 0

Query:    4 GVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACC 216
            G  R    AAG  N++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN DTF RAKNWVKELQRQA  +IVIALAGNK+DLA KR VE++EA AYA++N LLFMETSAK A NVNEIF+AIA++LP+  E  +A GA    R G D Q N       CC
Sbjct:    6 GAARPNGPAAG--NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKN-EPQNAAGAPSRNR-GVDLQENSPASRSQCC 214

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BLAST of ras-related protein rab-5c vs. SwissProt
Match: gi|75571188|sp|Q5ZHW4.1|RAB5B_CHICK (RecName: Full=Ras-related protein Rab-5B)

HSP 1 Score: 313.923 bits (803), Expect = 8.275e-109
Identity = 152/201 (75.62%), Postives = 170/201 (84.58%), Query Frame = 0

Query:   16 ANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACC 216
            A+++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQ++CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQ+TF RAK WVKELQRQA   IVIALAGNK+DLA KR+VEYEEA AYA++N LLFMETSAK A NVN++FLAIA++LP+  E  S +GA+G  R G D           CC
Sbjct:   15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLASKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKS-EPQSTSGAAGRSR-GVDLHEQTQQNKSQCC 213

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BLAST of ras-related protein rab-5c vs. SwissProt
Match: gi|82246551|sp|Q98932.1|RAB5C_CHICK (RecName: Full=Ras-related protein Rab-5C; AltName: Full=Rab5C-like protein)

HSP 1 Score: 311.612 bits (797), Expect = 7.494e-108
Identity = 155/213 (72.77%), Postives = 173/213 (81.22%), Query Frame = 0

Query:    4 GVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACC 216
            G  R    AAG  N++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN DTF RAKNWVKELQRQA  +IVIALAGNK+DLA KR V++++A  YA++N LLFMETSAK A NVNEIF+AIA++LP+  E  +A G  G  RV  D Q +       CC
Sbjct:    6 GAARPNGPAAG--NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKADLATKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKN-EPQNAPGGPGRNRV-VDLQESSQPSRSQCC 214

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BLAST of ras-related protein rab-5c vs. SwissProt
Match: gi|46577637|sp|P61020.1|RAB5B_HUMAN (RecName: Full=Ras-related protein Rab-5B >gi|48474314|sp|P61021.1|RAB5B_MOUSE RecName: Full=Ras-related protein Rab-5B >gi|75055067|sp|Q5RBG1.1|RAB5B_PONAB RecName: Full=Ras-related protein Rab-5B)

HSP 1 Score: 310.071 bits (793), Expect = 3.073e-107
Identity = 151/201 (75.12%), Postives = 169/201 (84.08%), Query Frame = 0

Query:   16 ANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACC 216
            A+++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQ++CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQ+TF RAK WVKELQRQA   IVIALAGNK+DLA KR+VEYEEA AYA++N LLFMETSAK A NVN++FLAIA++LP+  E  +  GA+G  R G D           CC
Sbjct:   15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKS-EPQNLGGAAGRSR-GVDLHEQSQQNKSQCC 213

[Close]

BLAST of ras-related protein rab-5c vs. SwissProt
Match: gi|1346958|sp|P20339.2|RAB5A_HUMAN (RecName: Full=Ras-related protein Rab-5A)

HSP 1 Score: 303.523 bits (776), Expect = 1.189e-104
Identity = 150/216 (69.44%), Postives = 171/216 (79.17%), Query Frame = 0

Query:    2 SSGVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPR-ERETASATGASGGVRVGADGQANGGGKLGACC 216
            S G  R      G  N++ QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN+++F RAKNWVKELQRQA  +IVIAL+GNK+DLA KR V+++EA +YA++N LLFMETSAK + NVNEIF+AIA++LP+ E +   A  A G    G D           CC
Sbjct:    3 SRGATRPNGPNTG--NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGR---GVDLTEPTQPTRNQCC 213

[Close]

BLAST of ras-related protein rab-5c vs. SwissProt
Match: gi|704043945|sp|M0RC99.1|RAB5A_RAT (RecName: Full=Ras-related protein Rab-5A; AltName: Full=Small GTP-binding protein rab5)

HSP 1 Score: 303.523 bits (776), Expect = 1.386e-104
Identity = 149/214 (69.63%), Postives = 170/214 (79.44%), Query Frame = 0

Query:    4 GVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPR-ERETASATGASGGVRVGADGQANGGGKLGACC 216
            G  R      G  N++ QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN+++F+RAKNWVKELQRQA  +IVIAL+GNK+DLA KR V+++EA +YA++N LLFMETSAK   NVNEIF+AIA++LP+ E +   A  A G    G D           CC
Sbjct:    5 GATRPNGPNTG--NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTPMNVNEIFMAIAKKLPKNEPQNPGANSARGR---GVDLTEPAQPARSQCC 213

[Close]

BLAST of ras-related protein rab-5c vs. SwissProt
Match: gi|32171710|sp|Q9CQD1.1|RAB5A_MOUSE (RecName: Full=Ras-related protein Rab-5A)

HSP 1 Score: 302.753 bits (774), Expect = 2.531e-104
Identity = 149/214 (69.63%), Postives = 170/214 (79.44%), Query Frame = 0

Query:    4 GVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPR-ERETASATGASGGVRVGADGQANGGGKLGACC 216
            G  R      G  N++ QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN+++F RAKNWVKELQRQA  +IVIAL+GNK+DLA KR V+++EA +YA++N LLFMETSAK + NVNEIF+AIA++LP+ E +   A  A G    G D           CC
Sbjct:    5 GATRPNGPNTG--NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGR---GVDLTEPAQPARSQCC 213

[Close]

BLAST of ras-related protein rab-5c vs. nr
Match: gi|669193531|gb|AII16471.1| (Ras-related protein Rab-5c, partial [Paracyclopina nana])

HSP 1 Score: 330.487 bits (846), Expect = 9.001e-113
Identity = 162/199 (81.41%), Postives = 177/199 (88.94%), Query Frame = 0

Query:   18 RMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACC 216
            R++QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQT+ LDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN DTFTRAK+WV+ELQRQAR DIVIALAGNKSDL   R VEYEEANAYAEENGLLF+ETSAK+ANNVNEIFLAIAR+LPR+++ AS+   + G R+   G    G K+G CC
Sbjct:   15 RIAQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVVLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNADTFTRAKSWVRELQRQARPDIVIALAGNKSDLGSIRSVEYEEANAYAEENGLLFLETSAKHANNVNEIFLAIARKLPRDQDQASS--GNSGRRLEETG-TESGNKMGQCC 210

[Close]

BLAST of ras-related protein rab-5c vs. nr
Match: gi|1325279233|ref|XP_023324265.1| (ras-related protein Rab-5B-like isoform X1 [Eurytemora affinis])

HSP 1 Score: 329.717 bits (844), Expect = 1.405e-112
Identity = 162/209 (77.51%), Postives = 178/209 (85.17%), Query Frame = 0

Query:    8 SGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACC 216
            SG    G   ++ QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN DTF RAKNWVKELQRQA  +IVIALAGNK+DL   R+VEY+EA+AYAEENGLLFMETSAK A NVN+IFLAIA++LP++ E A  +   GGVRV   G A  G K+G+CC
Sbjct:    3 SGQRPGGQQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNADTFERAKNWVKELQRQASPNIVIALAGNKADLTTNRIVEYDEASAYAEENGLLFMETSAKTALNVNDIFLAIAKKLPKDGEGAGPS--QGGVRV-TQGNAQEGSKMGSCC 208

[Close]

BLAST of ras-related protein rab-5c vs. nr
Match: gi|926640559|ref|XP_013786380.1| (ras-related protein Rab-5C-like [Limulus polyphemus] >gi|926640561|ref|XP_013786381.1| ras-related protein Rab-5C-like [Limulus polyphemus])

HSP 1 Score: 329.717 bits (844), Expect = 1.417e-112
Identity = 165/215 (76.74%), Postives = 177/215 (82.33%), Query Frame = 0

Query:    3 SGVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACCK 217
            SG  R   A  G   ++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDI NQDTF+RAK WVKELQRQA  +IVIALAGNK+DLA KRLVEYEEA AYAEENGLLFMETSAK A NVN+IFLAIA++LP+     SA+G SG  R G D   N     G CCK
Sbjct:    5 SGAQRPNGAMQG---KICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIVNQDTFSRAKTWVKELQRQASPNIVIALAGNKADLANKRLVEYEEAQAYAEENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEH--SASGVSGPGRRGVDLSENQQQSSGGCCK 214

[Close]

BLAST of ras-related protein rab-5c vs. nr
Match: gi|762087509|ref|XP_011426046.1| (PREDICTED: ras-related protein Rab-5C [Crassostrea gigas] >gi|405961918|gb|EKC27651.1| Ras-related protein Rab-5C [Crassostrea gigas])

HSP 1 Score: 325.479 bits (833), Expect = 8.239e-111
Identity = 163/217 (75.12%), Postives = 177/217 (81.57%), Query Frame = 0

Query:    3 SGVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGAD--GQANGGGKLGACCK 217
            +G  R   A  G   ++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTF RAKNWVKELQRQA  +IVIALAGNKSDLAQKR+VEYEEA AYAEEN LLFMETSAK A NVN+IFLAIA++LP+      A    GGV + +    Q+ GG     CCK
Sbjct:    5 TGAQRPNGATQG---KICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKNWVKELQRQASPNIVIALAGNKSDLAQKRMVEYEEAQAYAEENSLLFMETSAKTAMNVNDIFLAIAKKLPKNEGGGPAPSRPGGVNLNSQQTQQSEGG-----CCK 213

[Close]

BLAST of ras-related protein rab-5c vs. nr
Match: gi|1238880886|ref|XP_022253472.1| (ras-related protein Rab-5C-like isoform X1 [Limulus polyphemus])

HSP 1 Score: 324.709 bits (831), Expect = 1.802e-110
Identity = 163/215 (75.81%), Postives = 175/215 (81.40%), Query Frame = 0

Query:    3 SGVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACCK 217
            SG  R   A  G   ++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDI NQDTF+RAK WVKELQRQA  +IVIALAGNK+DLA KR VEYEEA AYAEENGLLFMETSAK A NVN+IFLAIA++LP+  + AS  G SG  R G D   N       CCK
Sbjct:   12 SGAQRPNGATQG---KICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIVNQDTFSRAKTWVKELQRQASPNIVIALAGNKADLANKRAVEYEEAQAYAEENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQLAS--GLSGQGRRGVDLSENQQQTSSGCCK 221

[Close]

BLAST of ras-related protein rab-5c vs. nr
Match: gi|926638429|ref|XP_013785230.1| (ras-related protein Rab-5C-like isoform X2 [Limulus polyphemus] >gi|1238880889|ref|XP_022253473.1| ras-related protein Rab-5C-like isoform X2 [Limulus polyphemus] >gi|1238880891|ref|XP_022253474.1| ras-related protein Rab-5C-like isoform X2 [Limulus polyphemus])

HSP 1 Score: 323.939 bits (829), Expect = 2.696e-110
Identity = 163/215 (75.81%), Postives = 175/215 (81.40%), Query Frame = 0

Query:    3 SGVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACCK 217
            SG  R   A  G   ++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDI NQDTF+RAK WVKELQRQA  +IVIALAGNK+DLA KR VEYEEA AYAEENGLLFMETSAK A NVN+IFLAIA++LP+  + AS  G SG  R G D   N       CCK
Sbjct:    5 SGAQRPNGATQG---KICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIVNQDTFSRAKTWVKELQRQASPNIVIALAGNKADLANKRAVEYEEAQAYAEENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQLAS--GLSGQGRRGVDLSENQQQTSSGCCK 214

[Close]

BLAST of ras-related protein rab-5c vs. nr
Match: gi|1242769869|ref|XP_022324353.1| (ras-related protein Rab-5B-like [Crassostrea virginica] >gi|1242769871|ref|XP_022324354.1| ras-related protein Rab-5B-like [Crassostrea virginica])

HSP 1 Score: 323.168 bits (827), Expect = 5.606e-110
Identity = 162/217 (74.65%), Postives = 176/217 (81.11%), Query Frame = 0

Query:    3 SGVNRSGAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGAD--GQANGGGKLGACCK 217
            +G  R   A  G   ++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTF RAKNWVKELQRQA  +IVIALAGNKSDLAQKR+VEYEEA AYAEEN LLFMETSAK A NVN+IFLAIA++LP+           GGV + +    Q+ GG     CCK
Sbjct:    5 TGAQRPNGATQG---KICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKNWVKELQRQASPNIVIALAGNKSDLAQKRMVEYEEAQAYAEENSLLFMETSAKTAMNVNDIFLAIAKKLPKNEGGGPTPTRPGGVNLNSQQTQQSEGG-----CCK 213

[Close]

BLAST of ras-related protein rab-5c vs. nr
Match: gi|961729388|ref|XP_014925091.1| (PREDICTED: ras-related protein Rab-5C [Acinonyx jubatus])

HSP 1 Score: 322.783 bits (826), Expect = 8.300e-110
Identity = 159/208 (76.44%), Postives = 173/208 (83.17%), Query Frame = 0

Query:    9 GAAAAGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACC 216
            G  A  A N++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN DTF RAKNWVKELQRQA  +IVIALAGNK+DLA KR VE++EA AYAE+N LLFMETSAK A NVNEIF+AIA++LP+  E  +A GA G  R G D Q N       CC
Sbjct:    5 GPRAPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKLPKN-EPQNAAGAPGRNR-GVDLQENNPASRSQCC 210

[Close]

BLAST of ras-related protein rab-5c vs. nr
Match: gi|1285010644|ref|XP_023017322.1| (ras-related protein Rab-5B isoform X1 [Leptinotarsa decemlineata])

HSP 1 Score: 323.168 bits (827), Expect = 9.088e-110
Identity = 161/215 (74.88%), Postives = 177/215 (82.33%), Query Frame = 0

Query:    6 NRSGAAA---AGAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVRVGADGQANGGGKLGACCK 217
            NR+G A         ++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTF RAK WVKELQRQA   IVIALAGNK DLA KR+VEYEEA  YA+ENGLLFMETSAK A NVN+IFLAIA++LP+  +T    G++ G R+ A+G A G    G CCK
Sbjct:   13 NRTGTAQRPNGSTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPTIVIALAGNKQDLANKRMVEYEEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQTTGQGGSAQGRRL-AEGDA-GAKAPGNCCK 225

[Close]

BLAST of ras-related protein rab-5c vs. nr
Match: gi|1227955595|ref|XP_021942459.1| (ras-related protein Rab-5B isoform X1 [Zootermopsis nevadensis] >gi|646723925|gb|KDR24359.1| Ras-related protein Rab-5B [Zootermopsis nevadensis])

HSP 1 Score: 322.783 bits (826), Expect = 9.935e-110
Identity = 163/218 (74.77%), Postives = 180/218 (82.57%), Query Frame = 0

Query:    2 SSGVNRSGAAAA-GAANRMSQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFTRAKNWVKELQRQARADIVIALAGNKSDLAQKRLVEYEEANAYAEENGLLFMETSAKNANNVNEIFLAIARQLPRERETASATGASGGVR-VGADGQANGGGKLGACCK 217
            S+  NRSGA    G   ++ QFKLVLLGESAVGKSSLVLRFVKGQFHE+QESTIGAAFLTQT+CLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTF RAK WVKELQRQA  +IVIALAGNK+DLA KR+VEY+EA  YAEENGLLFMETSAK A NVN+IFLAIA++LP+  + A A  +  G R V ++GQ    G    CCK
Sbjct:    6 SAMANRSGAQRPNGTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPNIVIALAGNKADLANKRMVEYDEARGYAEENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQVAGAGTSGQGRRLVESEGQQKAPGN---CCK 220

The following BLAST results are available for this feature:

BLAST of ras-related protein rab-5c vs. L. salmonis genes
BLAST of ras-related protein rab-5c vs. SwissProt
BLAST of ras-related protein rab-5c vs. nr

BLAST of ras-related protein rab-5c vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25


Match Name	E-value	Identity	Description
EMLSAG00000011153	5.313e-108	75.61	supercontig:LSalAtl2s:LSalAtl2s759:225438:227635:-...	[more]
EMLSAG00000001458	7.583e-55	42.56	supercontig:LSalAtl2s:LSalAtl2s1248:131241:136261:...	[more]
EMLSAG00000002040	4.064e-52	41.15	supercontig:LSalAtl2s:LSalAtl2s136:216604:221557:1...	[more]
EMLSAG00000003241	3.396e-46	46.84	supercontig:LSalAtl2s:LSalAtl2s178:231454:232215:-...	[more]
EMLSAG00000009511	1.953e-43	43.37	supercontig:LSalAtl2s:LSalAtl2s612:149458:156023:-...	[more]
EMLSAG00000001628	2.213e-42	50.81	supercontig:LSalAtl2s:LSalAtl2s128:1093888:1095612...	[more]
EMLSAG00000003190	1.249e-38	37.14	supercontig:LSalAtl2s:LSalAtl2s1770:8657:11199:-1 ...	[more]
EMLSAG00000012618	1.398e-37	34.93	supercontig:LSalAtl2s:LSalAtl2s94:53587:63698:1 ge...	[more]
EMLSAG00000000624	2.145e-36	41.07	supercontig:LSalAtl2s:LSalAtl2s109:73593:97815:1 g...	[more]
EMLSAG00000005149	1.241e-35	41.72	supercontig:LSalAtl2s:LSalAtl2s272:1903:7665:1 gen...	[more]

Pages

BLAST of ras-related protein rab-5c vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|38258923\|sp\|P51148.2\|RAB5C_HUMAN	6.205e-112	75.59	RecName: Full=Ras-related protein Rab-5C; AltName:...	[more]
gi\|75052596\|sp\|Q58DS9.1\|RAB5C_BOVIN	1.038e-111	75.59	RecName: Full=Ras-related protein Rab-5C	[more]
gi\|38258917\|sp\|P35278.2\|RAB5C_MOUSE	5.430e-111	74.65	RecName: Full=Ras-related protein Rab-5C	[more]
gi\|1710027\|sp\|P51147.1\|RAB5C_CANFA	1.589e-110	74.65	RecName: Full=Ras-related protein Rab-5C	[more]
gi\|75571188\|sp\|Q5ZHW4.1\|RAB5B_CHICK	8.275e-109	75.62	RecName: Full=Ras-related protein Rab-5B	[more]
gi\|82246551\|sp\|Q98932.1\|RAB5C_CHICK	7.494e-108	72.77	RecName: Full=Ras-related protein Rab-5C; AltName:...	[more]
gi\|46577637\|sp\|P61020.1\|RAB5B_HUMAN	3.073e-107	75.12	RecName: Full=Ras-related protein Rab-5B >gi\|48474...	[more]
gi\|1346958\|sp\|P20339.2\|RAB5A_HUMAN	1.189e-104	69.44	RecName: Full=Ras-related protein Rab-5A	[more]
gi\|704043945\|sp\|M0RC99.1\|RAB5A_RAT	1.386e-104	69.63	RecName: Full=Ras-related protein Rab-5A; AltName:...	[more]
gi\|32171710\|sp\|Q9CQD1.1\|RAB5A_MOUSE	2.531e-104	69.63	RecName: Full=Ras-related protein Rab-5A	[more]

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BLAST of ras-related protein rab-5c vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|669193531\|gb\|AII16471.1\|	9.001e-113	81.41	Ras-related protein Rab-5c, partial [Paracyclopina...	[more]
gi\|1325279233\|ref\|XP_023324265.1\|	1.405e-112	77.51	ras-related protein Rab-5B-like isoform X1 [Euryte...	[more]
gi\|926640559\|ref\|XP_013786380.1\|	1.417e-112	76.74	ras-related protein Rab-5C-like [Limulus polyphemu...	[more]
gi\|762087509\|ref\|XP_011426046.1\|	8.239e-111	75.12	PREDICTED: ras-related protein Rab-5C [Crassostrea...	[more]
gi\|1238880886\|ref\|XP_022253472.1\|	1.802e-110	75.81	ras-related protein Rab-5C-like isoform X1 [Limulu...	[more]
gi\|926638429\|ref\|XP_013785230.1\|	2.696e-110	75.81	ras-related protein Rab-5C-like isoform X2 [Limulu...	[more]
gi\|1242769869\|ref\|XP_022324353.1\|	5.606e-110	74.65	ras-related protein Rab-5B-like [Crassostrea virgi...	[more]
gi\|961729388\|ref\|XP_014925091.1\|	8.300e-110	76.44	PREDICTED: ras-related protein Rab-5C [Acinonyx ju...	[more]
gi\|1285010644\|ref\|XP_023017322.1\|	9.088e-110	74.88	ras-related protein Rab-5B isoform X1 [Leptinotars...	[more]
gi\|1227955595\|ref\|XP_021942459.1\|	9.935e-110	74.77	ras-related protein Rab-5B isoform X1 [Zootermopsi...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold71_size417697	supercontig	scaffold71_size417697:347145..347798 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold71_size417697-processed-gene-3.3-mRNA-1	snap_masked-scaffold71_size417697-processed-gene-3.3-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold71_size417697:347145..347798+

gene from alignment at scaffold71_size417697:347145..347798+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold71_size417697-processed-gene-3.3 ID=snap_masked-scaffold71_size417697-processed-gene-3.3|Name=ras-related protein rab-5c|organism=Tigriopus kingsejongensis|type=gene|length=654bp|location=Sequence derived from alignment at scaffold71_size417697:347145..347798+ (Tigriopus kingsejongensis)
ATGTCGTCGGGCGTGAACCGCAGCGGCGCCGCCGCCGCCGGCGCCGCCAA
CCGCATGTCCCAGTTCAAGCTGGTGCTCTTGGGCGAGTCGGCCGTGGGCA
AGTCCTCGCTGGTGCTGCGCTTCGTCAAGGGCCAGTTCCACGAGTTCCAG
GAGTCGACCATCGGGGCGGCCTTCCTCACGCAGACGCTGTGTCTGGACGA
CACGACGGTCAAGTTCGAGATCTGGGACACGGCGGGGCAGGAGCGCTACC
ACTCGCTGGCCCCCATGTACTACCGCGGGGCGCAGGCGGCCATCGTGGTC
TACGACATCACCAACCAGGACACGTTCACCCGGGCCAAGAACTGGGTCAA
GGAGCTGCAGCGTCAGGCTCGGGCCGACATCGTCATCGCCTTGGCCGGGA
ACAAGAGCGACTTGGCCCAGAAGCGGCTCGTCGAGTACGAGGAGGCCAAC
GCCTACGCCGAGGAGAATGGACTCCTCTTCATGGAGACGTCCGCCAAGAA
CGCCAACAACGTCAACGAGATTTTCTTGGCCATTGCCCGACAATTACCGC
GGGAGCGCGAGACCGCTTCGGCCACGGGCGCCTCCGGCGGCGTGCGGGTG
GGGGCCGACGGCCAAGCCAATGGTGGCGGCAAGTTGGGCGCGTGTTGCAA
ATAG

Synonyms

The feature 'ras-related protein rab-5c' has the following synonyms


Synonym
Tk11810

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