alpha-methylacyl- racemase, snap_masked-scaffold7547_size3127-processed-gene-0.2 (gene) Tigriopus kingsejongensis

Overview


Name	alpha-methylacyl- racemase
Unique Name	snap_masked-scaffold7547_size3127-processed-gene-0.2
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of alpha-methylacyl- racemase vs. L. salmonis genes
Match: EMLSAG00000001226 (supercontig:LSalAtl2s:LSalAtl2s11:421277:423175:1 gene:EMLSAG00000001226 transcript:EMLSAT00000001226 description:"maker-LSalAtl2s11-augustus-gene-4.11")

HSP 1 Score: 283.493 bits (724), Expect = 2.197e-93
Identity = 156/385 (40.52%), Postives = 230/385 (59.74%), Query Frame = 0

Query:    4 LQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQE-GPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGII--SARSTGEGQVVDAAMVDGAAALMN-MFWGMRANGFWNDERGTNMLDTGAPFYDVYETSD-GLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTF-IEVGGLTQAGPAPRFSKT-APATPAPAAHPGQHTDDVLAD-FGFDADTIAGLRSSGAI 380
            L+GV+++E+AG+   PF +M+L+D  A VIRV+     N  D    P D   RG++SI ++LK+ +G   V KL+  +D  +E FRPGV E++ L PD     NP L+Y R++G+GQE  P +  AGHDINYI+L+GAL  IGR  + PVPP+N+VGDFGGGG+  AFG+   +   S  S+G+GQ++D  +  GA+ L   ++        W + RG N+LDTGA FY+VYET + G Y+S+G++EPQFY+ LL    L   E++P      +   +K+  A  F+TKTR EW E+  + D C  PVLS+D+ +S  + + +  F I   G +   PAP+ S+T A  +       G+H+ ++L +  GF    I  L S   I
Sbjct:    3 LKGVRVVEMAGLAXAPFTSMILADFGASVIRVD-----NHPDAVVYP-DVSCRGKKSISLNLKSSKGRSIVKKLVNNSDVFLESFRPGVMEKLQLCPDVLTKENPSLIYARLSGYGQEHNPLTYRAGHDINYISLSGALSKIGRVNEKPVPPINIVGDFGGGGLTCAFGIIAALYERSVNSSGKGQIIDCGITQGASYLSTWLYQSKNIPHLWGNPRGENVLDTGAHFYEVYETKEPGKYISVGTVEPQFYSILLDKLELYPHEEYP--QFGGDTKKLKDIFASKFRTKTRKEWEEIFSNVDACVTPVLSIDEVSS--NELTKNNFHISNSGESVPLPAPKLSRTPAQISTIEPLRIGEHSIEILRNTLGFTKGEIDNLISEEII 377

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BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|341940628|sp|O09174.4|AMACR_MOUSE (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-methylacyl-CoA racemase)

HSP 1 Score: 354.369 bits (908), Expect = 1.300e-119
Identity = 172/376 (45.74%), Postives = 246/376 (65.43%), Query Frame = 0

Query:    4 LQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVG-GLTQAGPAPRFSKTAPATPAPAAHP--GQHTDDVLADFGFDADTIAGLRS 376
            L+GV+++ELAG+ PGPF  M+L+D  AEV+RV R  +          ++ L RG+RS+ +DLK  +GV  + ++  +AD L+E FR GV E++ LGP+  L  NPKL+Y R++G+GQ G +S  AGHDINY+AL+G L  IGR+G+ P PPLNL+ DFGGGG++   G+   +     +G GQV+D++MV+G A L +  W  +  G W   RG N+LD GAPFY  Y+T+DG ++++G+IEPQFYA LL+  GL E E+ P Q S ++WP MK+  A++F  KT+ EWC++ + TD C  PVL+ ++A  H HN ER +FI  G  L    PAP  S+T PA P+    P  G+HT +VL ++GF  + I  L S
Sbjct:    3 LRGVRVVELAGLAPGPFCGMVLADFGAEVVRVNRLGSTG--------ENFLARGKRSLALDLKRSQGVTVLRRMCARADVLLEPFRCGVMEKLQLGPETLLQDNPKLIYARLSGFGQSGIFSKVAGHDINYLALSGVLSKIGRSGENPYPPLNLLADFGGGGLMCTLGIVLALFERTRSGRGQVIDSSMVEGTAYLSSFLWKTQPMGLWKQPRGQNILDGGAPFYTTYKTADGEFMAVGAIEPQFYALLLKGLGL-ESEELPSQMSSADWPEMKKKFADVFAKKTKAEWCQIFDGTDACVTPVLTFEEALHHQHNRERASFITDGEQLPSPRPAPLLSRT-PAVPSAKRDPSVGEHTVEVLREYGFSQEEILQLHS 368

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BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|13637497|sp|P70473.3|AMACR_RAT (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-arylpropionyl-CoA epimerase; AltName: Full=2-methylacyl-CoA racemase)

HSP 1 Score: 348.206 bits (892), Expect = 3.812e-117
Identity = 174/380 (45.79%), Postives = 246/380 (64.74%), Query Frame = 0

Query:    4 LQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFI-EVGGLTQAGPAPRFSKTAPATPAPAAHP--GQHTDDVLADFGFDADTIAGLRSSGAI 380
            L+GV+++ELAG+ PGPF  M+L+D  AEV+ V+R  +VN   P++     L RG+RS+ +DLK   G   + ++  +AD L+E FR GV E++ LGP+     NPKL+Y R++G+GQ G +S  AGHDINY+AL+G L  IGR+G+ P PPLNL+ DFGGGG++   G+   +     +G GQV+DA MV+G A L    W  +A G W   RG N+LD GAPFY  Y+T+DG ++++G+IEPQFY  LL+  GL E E+ P Q S  +WP MK+  A++F  KT+ EWC++ + TD C  PVL++++A  H HN ERG+FI +        PAP+ S+T PA P+    P  G+HT +VL D+GF  + I  L S   I
Sbjct:    3 LRGVRVLELAGLAPGPFCGMILADFGAEVVLVDRLGSVN--HPSH-----LARGKRSLALDLKRSPGAAVLRRMCARADVLLEPFRCGVMEKLQLGPETLRQDNPKLIYARLSGFGQSGIFSKVAGHDINYVALSGVLSKIGRSGENPYPPLNLLADFGGGGLMCTLGILLALFERTRSGLGQVIDANMVEGTAYLSTFLWKTQAMGLWAQPRGQNLLDGGAPFYTTYKTADGEFMAVGAIEPQFYTLLLKGLGL-ESEELPSQMSIEDWPEMKKKFADVFARKTKAEWCQIFDGTDACVTPVLTLEEALHHQHNRERGSFITDEEQHACPRPAPQLSRT-PAVPSAKRDPSVGEHTVEVLKDYGFSQEEIHQLHSDRII 373

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BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|313104070|sp|Q9UHK6.2|AMACR_HUMAN (RecName: Full=Alpha-methylacyl-CoA racemase; AltName: Full=2-methylacyl-CoA racemase)

HSP 1 Score: 331.257 bits (848), Expect = 1.938e-110
Identity = 165/381 (43.31%), Postives = 235/381 (61.68%), Query Frame = 0

Query:    4 LQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGERED-FPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGL-TQAGPAPRFSKTAPATPAPAAHP--GQHTDDVLADFGFDADTIAGLRSSGAI 380
            LQG+ ++EL+G+ PGPF AM+L+D  A V+RV+R  +             L RG+RS+ +DLK P G   + +L +++D L+E FR GV E++ LGP+     NP+L+Y R++G+GQ G +   AGHDINY+AL+G L  IGR+G+ P  PLNL+ DF GGG++ A G+   +     TG+GQV+DA MV+G A L +  W  +    W   RG NMLD GAPFY  Y T+DG ++++G+IEPQFY  L++  GLG + D  P Q S  +WP MK+  A++F  KT+ EWC++ + TD C  PVL+ ++   H HN ERG+FI          PAP    T PA P+    P  G+HT+++L +FGF  + I  L S   I
Sbjct:    3 LQGISVVELSGLAPGPFCAMVLADFGARVVRVDRPGS-------RYDVSRLGRGKRSLVLDLKQPRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGSFCRLAGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTGKGQVIDANMVEGTAYLSSFLWKTQKLSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQFYELLIK--GLGLKSDELPNQMSMDDWPEMKKKFADVFAEKTKAEWCQIFDGTDACVTPVLTFEEVVHHDHNKERGSFITSEEQDVSPRPAPLLLNT-PAIPSFKRDPFIGEHTEEILEEFGFSREEIYQLNSDKII 373

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BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|74620364|sp|Q8J0F0.1|CEFD2_ACRCH (RecName: Full=Isopenicillin N epimerase component 2; Short=IPN epimerase component 2; AltName: Full=Isopenicillin N epimerase acyl-CoA racemase component)

HSP 1 Score: 266.929 bits (681), Expect = 2.389e-85
Identity = 146/356 (41.01%), Postives = 204/356 (57.30%), Query Frame = 0

Query:    3 PLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLAR-NPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSD--GLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQ 355
            PL G  ++ELAG+ PGPF  M+L+D  A V+R++         P +P  D L R + SI +DLK+P   + +L ++ +AD LI+ FRPGV ER+GL P + L + N +LV  R+TG+ ++G Y   AGHDINY+A++G L  +GRAG+ P PP N++GDF GGG +   G+   ++S  +TG GQVV+A MVDG+A L  M        FW   RG N+LD G P+Y  Y T D  G Y+++G++EP FY  L+R  GL ++ D PP+  R+ WP ++      F  +TR EW E+ + TD C  PVL                  E G L +AG   R      ATP     PGQ
Sbjct:    8 PLSGKLVVELAGLAPGPFCGMLLADYGASVLRID--------GPRSPKGDVLARNKSSICIDLKHPPSRKVLLSILSRADVLIDPFRPGVLERLGLSPTEVLLKANARLVVARLTGFRRDGKYQDMAGHDINYLAVSGVLAMLGRAGENPFPPANILGDFAGGGAMCVVGILLALVSRDATGLGQVVEANMVDGSAYLATMPRLATKTPFWGSPRGENVLDGGCPWYATYRTKDPGGKYMAVGALEPHFYEVLVRGLGL-DKTDLPPREDRANWPRLRALFEAKFAERTRSEWAEVFDGTDACVTPVL------------------EQGELEKAGFEQRLPVNLGATPGKPILPGQ 336

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BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|29840845|sp|Q09618.3|YS74_CAEEL (RecName: Full=CaiB/baiF CoA-transferase family protein ZK892.4)

HSP 1 Score: 197.593 bits (501), Expect = 6.611e-59
Identity = 111/339 (32.74%), Postives = 177/339 (52.21%), Query Frame = 0

Query:    4 LQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPP-KDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPI-GRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIIS-ARSTGEGQVVDAAMVDGAAALMNMFWGMRAN-GFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPR 338
            L G+K++E+AG+ P P   MML+D  A+V  +         D  NP  +  L RG+    +DLKNPE ++ V  L + +D L++ +RPG  E+MGL P      N  L+  +++G+GQ G  S   GHDINY+AL+G L    G     P PP N++ DF GGG+  AFG+   I + + + G+G ++D +M +G A L +           + D+    +     P Y  Y+T D  +V++G++EP+FY  L +L  +  R+ F           + E +   F  KTRD+W  + +  + C  PVL + +  S+  +V+R +F +      A P+PR
Sbjct:    5 LSGIKVVEIAGLAPVPHCGMMLADFGADVTVI---------DKKNPAIEQRLNRGKTMKQLDLKNPEDIKKVRDLCQTSDVLLDPYRPGTLEKMGLDPSTLWNNNKGLIICKISGYGQTGRMSQETGHDINYVALSGMLPTFSGVNATRPWPPANMLADFAGGGLSAAFGILSAIYARSHNGGKGCLLDCSMTEGVAYLSSFVQHYYDQPNLFTDKYA--LFSGECPIYRTYKTKDDKFVAVGAVEPKFYQNLFKLLNVDGRDLFVNPGK------ITEDLESRFLQKTRDKWANIFKGQECCVTPVLDIHEVGSYGQHVDRNSFTKTSSNWIANPSPR 326

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BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|71152390|sp|Q9HAC7.2|SUCHY_HUMAN (RecName: Full=Succinate--hydroxymethylglutarate CoA-transferase; AltName: Full=Dermal papilla-derived protein 13; AltName: Full=SuccinylCoA:glutarate-CoA transferase; Flags: Precursor)

HSP 1 Score: 164.851 bits (416), Expect = 1.914e-45
Identity = 119/404 (29.46%), Postives = 195/404 (48.27%), Query Frame = 0

Query:    1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPP--------KDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFG-LACGIISARSTGEGQVVDAAMVDGAAALM-----NMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGERED---FPPQHSR-SEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIE-----VGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLAD-FGFDADTIAGLRSSGAI 380
            + PL+GVKI++L  +  GPFA M L D+ AEVI+VER  A +      PP          ++ R ++SI V++K+P+GV+ + +L    D  +E + PG    MGLG +D     P ++Y  +TG+GQ GP S  AG+D    A++G +   G     PV P   + D   G  L A+G +  G+I    TG+G  +D  ++    A +     N   G +    W    G+ +       Y  ++T DG Y+ +G+   Q +A + ++  L E  D   +   H R      + + ++E F+ +   +W  L E + V + P+ +M +  + P  +  G  +E     VG ++  GPA R+SK   +   P    GQHT  +L +   +D   I  L S+G +
Sbjct:   45 IKPLEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVGTESTYYLSVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAMGLGYEDIDEIAPHIIYCSITGYGQTGPISQRAGYDAVASAVSGLMHITGPENGDPVRPGVAMTDLATG--LYAYGAIMAGLIQKYKTGKGLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWGTAHGSIVP------YQAFKTKDG-YIVVGAGNNQQFATVCKILDLPELIDNSKYKTNHLRVHNRKELIKILSERFEEELTSKWLYLFEGSGVPYGPINNMKNVFAEPQVLHNGLVMEMEHPTVGKISVPGPAVRYSKFKMSEARPPPLLGQHTTHILKEVLRYDDRAIGELLSAGVV 439

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BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|71152392|sp|Q68FU4.1|SUCHY_RAT (RecName: Full=Succinate--hydroxymethylglutarate CoA-transferase; AltName: Full=SuccinylCoA:glutarate-CoA transferase; Flags: Precursor)

HSP 1 Score: 161.384 bits (407), Expect = 2.824e-44
Identity = 127/406 (31.28%), Postives = 189/406 (46.55%), Query Frame = 0

Query:    1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKD--------ALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFG-LACGIISARSTGEGQVVDAAMVDGAAALM-----NMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGERED---FPPQHSRSEWPAMKETVAEL---FKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIE-----VGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLAD-FGFDADTIAGLRSSGAI 380
            M PL+GV+I++L  +  GPFA M L D+ AEVI+VER  A +      PP          ++ R ++SI V++K+P GV  V +L    D  +E + PG    MGLG  D     P +VY  +TG+GQ GP S  AG+D    A++G +   G     PV P   + D   G  L A+G +  G+I    TG+G  +D  ++    A +     N   G +    W    G+ +       Y  ++T DG Y+ IG+   Q +A L ++  L E  D   +   H R +    KE V  L   F  +   +W  L E + + + P+ S+ D  S    +  G  +E     VG ++  GPA R+SK   +   P    GQHT  +L +   +D   I  L  SG I
Sbjct:   36 MKPLEGVRILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRSWGPPFVNTESTYFLSVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYADIDKIAPHIVYCSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATG--LFAYGAIMAGLIQRYRTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSIVP------YQAFKTKDG-YLVIGAGNNQQFAVLCKILNLPELIDDSKYRTNHLRVQ--NRKELVKILSARFAEEVTAKWLCLFEGSGIPYGPINSLKDVFSEAQVLHNGLVMEMNHPTVGKISVPGPAVRYSKFKMSEAKPPPLLGQHTRHILKEVLRYDEGVIGELLCSGVI 430

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BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|408360016|sp|Q7TNE1.2|SUCHY_MOUSE (RecName: Full=Succinate--hydroxymethylglutarate CoA-transferase; AltName: Full=SuccinylCoA:glutarate-CoA transferase; Flags: Precursor)

HSP 1 Score: 160.229 bits (404), Expect = 9.213e-44
Identity = 124/406 (30.54%), Postives = 190/406 (46.80%), Query Frame = 0

Query:    1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKD--------ALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFG-LACGIISARSTGEGQVVDAAMVDGAAALM-----NMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGERED---FPPQHSRSEWPAMKETVAEL---FKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIE-----VGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLAD-FGFDADTIAGLRSSGAI 380
            M PL+GV+I++L  +  GPFA M L D+ AEVI+VER  A +      PP          ++ R ++SI V++K+P GV  V +L    D  +E + PG    MGLG +D     P ++Y  +TG+GQ GP S  AG+D    A++G +   G     PV P   + D   G  L A+G +  G++    TG+G  +D  ++    A +     N   G +    W    G+ +       Y  ++T DG Y+ IG+   Q +A + ++  L E  D   +   H R +    KE V  L   F  +   +W  L E + + + P+ S+ D  S    +  G  +E     VG ++  GPA R+SK   +   P    GQHT  +L +   +D   I  L  SG I
Sbjct:   36 MKPLEGVRILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRSWGPPFVNTESTYFLSVNRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYEDIDKIAPHIIYCSITGYGQTGPMSHRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATG--LFAYGAIMAGLLQRYRTGKGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHGSIVP------YQAFKTKDG-YLVIGAGNNQQFAVVCKILNLPELIDDCKYRTNHLRVQ--NRKELVKILSARFAEEVTAKWLCLFEGSGIPYGPINSLKDVFSEAQVLHNGLVMEMNHPTVGKISVPGPAVRYSKFKMSEAKPPPLLGQHTRHILKEVLRYDEGAIEKLLCSGVI 430

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BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|667467185|sp|A9WGE3.1|SCCT_CHLAA (RecName: Full=Succinyl-CoA--D-citramalate CoA-transferase)

HSP 1 Score: 134.035 bits (336), Expect = 2.314e-34
Identity = 116/400 (29.00%), Postives = 175/400 (43.75%), Query Frame = 0

Query:    3 PLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKD-----------ALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALM-NMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSG---LGEREDFPPQHSRSEWPA-MKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFI-----EVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLAD-FGFDADTIAGLRSSGAI 380
            PL  V+++EL     GPF   +L+D  AEVI+VE       GDP                  L R ++SI +DL+ PEG   V +L+   D ++E FRPG  E  GLG ++  A NP L+  R++G+GQ GPY   AG      A+ G     G   + P      +GD        A G    +   + +G+GQVVD  + +G  ALM +M    +  G    ER  N+L   AP  ++Y T+DG +  IG+     +  L +  G   L     F    +R E  A + + +A      T D+   +M+   V    + +  +  S PH + R + I     ++G +      PR S T           GQH  ++  D  G   D +A L++   I
Sbjct:    9 PLDDVRVLELGAFLAGPFCGQLLADFGAEVIKVEPPGK---GDPMREWGRHRYKGRTLWWPVLARNKKSITIDLRTPEGQALVKRLVPHVDMVLENFRPGTLEEWGLGWEELHALNPGLIMIRVSGFGQTGPYRDKAGFGSIGEAMGGIRAITGFPDRPPTRIGISIGD-SLAATFAALGALVALHQRQRSGQGQVVDIGIYEGVLALMESMIPEYQLTGHIR-ERTGNILPNVAP-SNIYPTADGSWFVIGANADTIFTRLAQAMGQPELATDPRFATHQARGEHQAELDDLIAAWTLNYTADQLQVMMDEYGVPAGRIYTAKEMLSDPHFIARQSIIGVHDPDLGEIKMQNVVPRLSATPGGVDWTGPALGQHNREIFTDLLGLTEDDLAMLQAKRVI 402

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BLAST of alpha-methylacyl- racemase vs. SwissProt
Match: gi|19861453|sp|P76518.2|ACOCT_ECOLI (RecName: Full=Acetyl-CoA:oxalate CoA-transferase; Short=ACOCT; AltName: Full=Acetyl-coenzyme A transferase; AltName: Full=CoA:oxalate CoA-transferase)

HSP 1 Score: 124.79 bits (312), Expect = 4.930e-31
Identity = 103/375 (27.47%), Postives = 160/375 (42.67%), Query Frame = 0

Query:    2 GPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDA-------LTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNM-FWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYA--ELLRLSGLGEREDFPPQHSRSEWPA-MKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAP-AAHPGQHTDDVLADF 364
            GP +G+ +I++  +  GPF   +L +M A VI+VE     +      P  D        +  G+ S+ +DLKN       + +++QAD L E FRPG  E++G   +     NP+L+Y   +G+G  GP   A  +D    A++G +   G     PV     + D  GG  L + G+   +     +  G  VD AM D   + +        A G  + +R  N     APF DV+ T D         +  F A  + L L+ L     F     R +  A +K+ +    KT+  + W   +    V  AP+LS+ +A   P    R   IE GG+   G   + S  A     P AA   QH + +  +F
Sbjct:    8 GPFEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPPGHGDDTRTFGPYVDGQSLYYSFINHGKESVVLDLKNDHDKSIFINMLKQADVLAENFRPGTMEKLGFSWETLQEINPRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYPDAPPVRVGTSLADLCGGVYLFS-GIVSALYGREKSQRGAHVDIAMFDATLSFLEHGLMAYIATG-KSPQRLGNRHPYMAPF-DVFNTQDKPITICCGNDKLFSALCQALELTELVNDPRFSSNILRVQNQAILKQYIERTLKTQAAEVWLARIHEVGVPVAPLLSVAEAIKLPQTQARNMLIEAGGIMMPGNPIKISGCADPHVMPGAATLDQHGEQIRQEF 379

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BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|1251832524|gb|PDH69491.1| (carnitine dehydratase [Acidimicrobiales bacterium MED-G01])

HSP 1 Score: 564.688 bits (1454), Expect = 0.000e+0
Identity = 264/381 (69.29%), Postives = 312/381 (81.89%), Query Frame = 0

Query:    1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAIA 381
            MGPLQG+++IEL GIGP PF  MMLSDM AEVIR++R+  V+G D  NPP D L RGR SIGVDLKNPEGVE VL+LIE AD LIEGFRPGV ER+GLGP++CLARNP+LV+GRMTGWGQEGPY++AAGHDINYIALAGALEPIGR G+APVPPLNLVGDFGGGGMLLAFG+ C ++ A+ +G+GQVVDAAMVDGAA+LM MF  MRA G WNDERGTN+LDTG+ FYDVYE +DG Y+SIGSIEPQFY+EL+RL+GL + EDF  Q  R+ WP +KE ++ +F TKTRDEWCE+M+ TDVCFAPVL++ +A +HPHN  R  F EV G+TQ  P+PRFS+T      P AHPGQHTD+VL   G+D D I  LR  GA+A
Sbjct:    1 MGPLQGIRVIELQGIGPAPFCGMMLSDMGAEVIRIDRAGNVSGIDSDNPPIDVLARGRSSIGVDLKNPEGVEVVLRLIENADALIEGFRPGVMERLGLGPEECLARNPRLVFGRMTGWGQEGPYAMAAGHDINYIALAGALEPIGRHGEAPVPPLNLVGDFGGGGMLLAFGVVCAVVEAQRSGQGQVVDAAMVDGAASLMAMFHSMRALGVWNDERGTNLLDTGSHFYDVYECADGRYISIGSIEPQFYSELMRLTGLDQEEDFASQMVRTSWPNLKERISAVFMTKTRDEWCEIMDATDVCFAPVLTLAEAPNHPHNQHREVFTEVAGVTQPNPSPRFSRTQETIQGPPAHPGQHTDEVLRSAGYDPDDILKLRDVGAVA 381

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BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|745855482|gb|KIE52747.1| (carnitine dehydratase [marine actinobacterium MedAcidi-G3] >gi|1200627320|gb|OUX35532.1| CoA transferase [Actinobacteria bacterium TMED270] >gi|1200628129|gb|OUX36321.1| CoA transferase [Actinobacteria bacterium TMED270])

HSP 1 Score: 553.132 bits (1424), Expect = 0.000e+0
Identity = 260/381 (68.24%), Postives = 308/381 (80.84%), Query Frame = 0

Query:    1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAIA 381
            MGPLQG+++IEL GIGPGPF  MMLSDM AEVIR++R+  V+G     PP D L RGR SIGVDLKNPEGVE VL+LIE AD LIEGFRPGV ER+GLGPD+C ARNPKLV+GRMTGWGQEGPY++AAGHDINYIALAGALEPIGR G+APVPPLNLVGDFGGGGMLLAFG+ C ++ A+ +G+GQVVDAAMVDGAA+LM MF  MRA G WNDERGTN+LDTG+ FYDVYE +DG Y+SIGSIEPQFY+ELLRL+GL + + F  Q  R+ WP +KE +  +F TKTRD+WCE+ME TDVCFAPVL++ +A  HPHN  RG F E+ G+ Q  P+PRFS+T      P A+PG+HTD VL+  G+D D I+ LR  GA+A
Sbjct:    1 MGPLQGIRVIELQGIGPGPFCGMMLSDMGAEVIRIDRAGNVSGVASDGPPIDVLARGRSSIGVDLKNPEGVEVVLRLIETADALIEGFRPGVMERLGLGPDECFARNPKLVFGRMTGWGQEGPYAMAAGHDINYIALAGALEPIGRQGEAPVPPLNLVGDFGGGGMLLAFGVVCAVVEAQRSGKGQVVDAAMVDGAASLMAMFHSMRALGVWNDERGTNLLDTGSHFYDVYECADGRYISIGSIEPQFYSELLRLTGLEQDDGFAAQMDRTSWPDLKERIGAVFMTKTRDDWCEIMEATDVCFAPVLTLAEAPEHPHNQHRGVFTEIAGVVQPNPSPRFSRTKEVIQGPPANPGEHTDQVLSSAGYDPDDISKLRDVGAVA 381

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BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|1200520411|gb|OUW33579.1| (carnitine dehydratase [Actinobacteria bacterium TMED172])

HSP 1 Score: 551.977 bits (1421), Expect = 0.000e+0
Identity = 259/381 (67.98%), Postives = 308/381 (80.84%), Query Frame = 0

Query:    1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAIA 381
            MGPLQG+++IEL GIGPGPF  MMLSDM AEVIR++R+  V+  D  NPP D L RGR SIGVDLK+P+GVE VL+L+E AD LIEGFRPGV ER+G+GPD+CLARNP LVYGRMTGWGQEGPY++AAGHDINYIALAGALEPIGR G+AP+PPLNLVGDFGGGGMLLAFG+ACGI+ A+ +G GQVVDAAM+DG+A LM MF  MRA G WNDERGTN+LDTG+ FYDVYE +DG Y+SIGSIEPQFY+EL+RL+GL     F  Q  R+ WP +K  + ELF TKTRD+WCE+M+ TDVCFAPVLS+++A  HPHN  R  F E+ G+TQ  P+PRFS+T      P AHPGQ TD+VL+  G+D+D I  LR  GA+A
Sbjct:    1 MGPLQGIRVIELQGIGPGPFCGMMLSDMGAEVIRIDRAGNVSAMDKENPPIDVLARGRSSIGVDLKHPDGVEVVLRLVETADALIEGFRPGVMERLGIGPDECLARNPGLVYGRMTGWGQEGPYAMAAGHDINYIALAGALEPIGRNGEAPLPPLNLVGDFGGGGMLLAFGMACGIVEAQRSGHGQVVDAAMIDGSATLMAMFHSMRAMGVWNDERGTNLLDTGSHFYDVYECADGEYISIGSIEPQFYSELMRLTGLDNDAAFAAQMDRAGWPELKARIGELFMTKTRDQWCEIMDATDVCFAPVLSLEEAPRHPHNQHRKVFTEIAGVTQPNPSPRFSRTKEEIQGPPAHPGQDTDEVLSSAGYDSDDILKLRDVGAVA 381

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BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|1176748538|gb|OQY66857.1| (carnitine dehydratase [Polyangiaceae bacterium UTPRO1])

HSP 1 Score: 524.628 bits (1350), Expect = 0.000e+0
Identity = 252/380 (66.32%), Postives = 300/380 (78.95%), Query Frame = 0

Query:    2 GPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAIA 381
            GPL G++I+EL GIGPGPFA M+L+D+ A+VIRV+R+  V GGDP +PP D L RGRRSIGVDLK P GVE VL+L+ +AD LIEGFRPGV ER+GLGP+ C ARNP+LVYGRMTGWGQEGP + AAGHDINYI+L GAL  IGR G+APVPPLNLVGDFGGG M L  G+   ++  +++G+GQVVDAAM DGAA+LM +F+G++A GFW DERG NMLD+GA FYDVYET DG +VSIGSIEPQFYA LL+ +GL   ED P Q  R  WP +KE +A +F++KTRDEWC +ME +DVCFAPVLSM +A  HPHNV RGTF EV G+ Q  PAPRFS+T  A   P AHPGQHTD  LAD+GF A  IA LR++ AIA
Sbjct:    6 GPLSGIRIVELVGIGPGPFACMLLADLGADVIRVDRAQNVGGGDPESPPADLLARGRRSIGVDLKTPAGVETVLRLVAEADVLIEGFRPGVMERLGLGPEVCAARNPRLVYGRMTGWGQEGPLANAAGHDINYISLTGALHAIGRRGEAPVPPLNLVGDFGGGTMYLVMGVLAALVERQTSGKGQVVDAAMTDGAASLMTIFYGIKAIGFWKDERGVNMLDSGAHFYDVYETKDGRHVSIGSIEPQFYALLLQHTGLAG-EDLPAQFDRDRWPELKEKMAAIFRSKTRDEWCAIMEGSDVCFAPVLSMTEAPRHPHNVARGTFTEVKGVVQPAPAPRFSRTPGAIQGPPAHPGQHTDAALADWGFSAGEIAKLRAAKAIA 384

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BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|1200370596|gb|OUU89597.1| (carnitine dehydratase [Proteobacteria bacterium TMED72])

HSP 1 Score: 520.005 bits (1338), Expect = 0.000e+0
Identity = 249/381 (65.35%), Postives = 300/381 (78.74%), Query Frame = 0

Query:    1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAIA 381
            MGPL+G++I+E+AGIGPGPFA MMLSDM A+V+RV+R+  V GGDP NPPKD L RGRRS+ VDLKNP+G+E VL+++EQ+D +IEGFRPGV ER+GLGP  CL RNP++V+GRMTGWGQEGP + AAGHDINYIAL GAL+ IGR G+APVPPLNLVGDFGGGGMLLA+G+ C ++    +  GQVVDAAMVDGA+ LM M + M+A G WN ERG+NML TGA FYD YETSDG Y+SIGSIEPQFYA LL  SG GE E+ P    +S+WP +KE +  +FKT+TR EWCE+ME TD+CFAPVLSMD+A  HPH   R TF+EV G+TQ  PAPRFS+T P    P +  GQHT++VL  FG   D IA LR+  AIA
Sbjct:    1 MGPLKGIRILEIAGIGPGPFAGMMLSDMGADVVRVDRADRVKGGDPDNPPKDVLARGRRSVAVDLKNPDGIELVLQMVEQSDVVIEGFRPGVMERLGLGPXTCLERNPRIVFGRMTGWGQEGPMAQAAGHDINYIALTGALDAIGRKGEAPVPPLNLVGDFGGGGMLLAYGIVCALVERGVSNRGQVVDAAMVDGASTLMAMMYAMKAMGVWNSERGSNMLXTGAHFYDAYETSDGKYISIGSIEPQFYALLLERSGFGEGEELPRAMDQSQWPVLKEKMVAMFKTRTRAEWCEIMEGTDICFAPVLSMDEAPDHPHMRHRETFVEVAGVTQPAPAPRFSRTEPELTRPPSFEGQHTEEVLESFGLSRDQIASLRAGNAIA 381

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BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|1200415375|gb|OUV32568.1| (carnitine dehydratase [bacterium TMED88])

HSP 1 Score: 518.85 bits (1335), Expect = 0.000e+0
Identity = 256/381 (67.19%), Postives = 297/381 (77.95%), Query Frame = 0

Query:    1 MGPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAIA 381
            MGPL GV IIE+AGIGPGPFA MMLSDM A+VIRV+R+  V     A  PKD L RGRRS+ VDLKNP GVE VL LIE+ADGLIEGFRPGV ER+GLGP+ CLARNPKLV+GRMTGWGQEGP + AAGHDINYIAL GALE IGR+G+APVPPLNLVGDFGGGGMLLAFG+AC ++ +  +G+GQVVDAAMVDGA++LM M +  +A G W  ERG N+LDTGA FYDVYET+DG YVS+GSIEPQFYA LL+ +GL   +D PPQ  R++W   KE +  +FK KTR EW E+ME TDVCFAPVL MD+A  HPH   RGTF++  G+TQ  PAPRF +T P    P +  GQHTD++LAD GF AD I  LR S AIA
Sbjct:    1 MGPLSGVTIIEIAGIGPGPFAGMMLSDMGADVIRVDRADRVKEAGAAQVPKDILARGRRSVAVDLKNPAGVETVLGLIEKADGLIEGFRPGVMERLGLGPEVCLARNPKLVFGRMTGWGQEGPLAQAAGHDINYIALTGALEAIGRSGEAPVPPLNLVGDFGGGGMLLAFGMACALVESGRSGQGQVVDAAMVDGASSLMAMVYSFKAMGIWG-ERGENLLDTGAHFYDVYETADGEYVSVGSIEPQFYALLLKHTGL-TGDDLPPQMDRTQWVPSKEKLGAIFKAKTRAEWTEIMEGTDVCFAPVLDMDEAPEHPHMKHRGTFVDFHGVTQPAPAPRFDRTVPELSRPPSTEGQHTDEILADMGFTADRIRALRESKAIA 379

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BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|949053543|gb|KRO53398.1| (carnitine dehydratase [Acidimicrobiia bacterium BACL6 MAG-120910-bin40] >gi|949059114|gb|KRO57522.1| carnitine dehydratase [Acidimicrobiia bacterium BACL6 MAG-120322-bin79])

HSP 1 Score: 513.842 bits (1322), Expect = 1.173e-179
Identity = 243/380 (63.95%), Postives = 299/380 (78.68%), Query Frame = 0

Query:    2 GPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDER-GTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAI 380
            GPL G +IIELAGIGPGPFAAMML+DM AEVIRVER+ +V G  P     D L RGRR+I +DLKNP+GVE +L L+E AD LIEGFRPGV ER+G+GPD C+ARNPKLV+GRMTGWGQEGPY+ +AGHDINYI+LAGAL    RAG+APVPPLN+VGDFGGGGM LA+G+ C ++ A+ +G+GQVVD AMVDG+A LM+MFW M+  G +++ + GTN+LDTGA FYDV+E  DG YVSIGSIEPQFY  LL  +GL +   F  Q   S+WP +K  +A++ +TKT  +WCE+ME TDVCFAPVL+M +AA HPHN+ R TFIEV G+TQ  PAPRFS+TA A P+  AH GQH+  VL D+GFDAD ++ L +SGA+
Sbjct:   12 GPLAGYRIIELAGIGPGPFAAMMLADMGAEVIRVERAQSVRGQAPDGAHWDVLLRGRRNIAIDLKNPDGVETLLSLVEHADALIEGFRPGVMERLGVGPDVCVARNPKLVFGRMTGWGQEGPYAASAGHDINYISLAGALAHFSRAGEAPVPPLNMVGDFGGGGMFLAYGVVCALLEAQKSGKGQVVDTAMVDGSAVLMSMFWAMKNIGIFDENKPGTNLLDTGAHFYDVFECGDGKYVSIGSIEPQFYLLLLEKTGLIDDPAFAKQMDTSQWPLLKTRLADVMRTKTSAQWCEIMEGTDVCFAPVLTMSEAAKHPHNIARQTFIEVDGVTQPAPAPRFSRTAAALPSAPAHAGQHSRSVLTDWGFDADRVSALIASGAV 391

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BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|750188738|ref|WP_040492812.1| (CoA transferase [Ilumatobacter nonamiensis])

HSP 1 Score: 510.375 bits (1313), Expect = 1.769e-178
Identity = 250/380 (65.79%), Postives = 296/380 (77.89%), Query Frame = 0

Query:    2 GPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANG-FWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAI 380
            GPL G +IIE+AGIGPGPFAAM+L+D+ AEVIRVER+ AV G  P  P  D L RGRR+I +DLKNP+GVE +L L+E AD LIEGFRPGV ER+G+GPD CLARNPKLV+GRMTGWGQ GPYS AAGHDINYI+LAGAL   GR G+ P PPLN+VGDFGGGGM LA G+   ++ A  +GEGQVVD AMVDG+A LM+MFW  +  G F  + RGTN+LDTGA FYDVY  SDG Y+SIGSIEPQFYAELLRL+GL + E F  Q  + EW  +KE + E+F  KTR+EWC +MEHTDVCFAPVL+M +AA+HPHNVER TFI+VGG+TQ  PAPRFS+TA +  +  A PG+HT DVLA +GFD   I  L  SGA+
Sbjct:    3 GPLAGHRIIEIAGIGPGPFAAMLLADLGAEVIRVERAGAVRGPAPEEPHGDILLRGRRNIAIDLKNPDGVETLLGLVEGADALIEGFRPGVMERLGIGPDVCLARNPKLVFGRMTGWGQTGPYSQAAGHDINYISLAGALAHFGRKGEGPTPPLNMVGDFGGGGMFLALGVVAALLEAGKSGEGQVVDTAMVDGSAVLMSMFWAFKEMGAFDENARGTNLLDTGAHFYDVYRCSDGEYISIGSIEPQFYAELLRLTGLSDDEQFAKQMDQGEWGPLKERLTEVFAGKTREEWCSIMEHTDVCFAPVLTMSEAAAHPHNVERETFIDVGGVTQPAPAPRFSRTATSVESAPAWPGEHTRDVLAAWGFDEARIDELIESGAV 382

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BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|684290572|gb|KGA10165.1| (alpha-methylacyl-CoA racemase [actinobacterium acAcidi])

HSP 1 Score: 507.679 bits (1306), Expect = 1.958e-177
Identity = 238/380 (62.63%), Postives = 294/380 (77.37%), Query Frame = 0

Query:    2 GPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMFWGMRANGFWNDE-RGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAI 380
            GPL G +I+E+AGIGPGPFAAMMLSDM AEVIRVER+ AV G     P  D L RGR++I +DLK+PEGVE +LKL+E AD LIEGFRPGV ER+G+GP+ CLARNPKLV+GRMTGWGQ G Y+ AAGHDINYI+LAGAL   GRAG+ PVPP+N+VGDFGGGGM LAFG+ C ++ A  + +GQVVDAAMVDG + LM MFW     G  ++  RGTN+LDTGA FYDVYE  DG Y+SIGSIE QFYA+LL+L+GL    +F  Q  +S+WP +K+ +AE+FK+KTRDEWC +ME TDVCFAPVL+M +AA+HPHN+ER   I++ G  Q  PAPRFS+T P+   P AHPGQH+ ++L  +GF +  I  L +SGA+
Sbjct:    3 GPLSGFRIVEIAGIGPGPFAAMMLSDMGAEVIRVERAQAVRGPALDGPAFDILQRGRQNIAIDLKSPEGVETLLKLVESADALIEGFRPGVMERLGIGPEVCLARNPKLVFGRMTGWGQTGMYAQAAGHDINYISLAGALAHFGRAGEGPVPPMNMVGDFGGGGMFLAFGVVCALLEATKSNKGQVVDAAMVDGTSVLMTMFWAFSQMGVHDENARGTNLLDTGAHFYDVYECKDGKYISIGSIETQFYAQLLQLTGLDSDPEFAKQMDKSQWPHLKKRIAEVFKSKTRDEWCAIMETTDVCFAPVLTMSEAAAHPHNIERNMIIDIAGTKQPAPAPRFSRTVPSVSRPPAHPGQHSREILEGWGFGSSEIEKLLASGAV 382

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BLAST of alpha-methylacyl- racemase vs. nr
Match: gi|918755401|ref|WP_052608267.1| (CoA transferase [Actinobacteria bacterium IMCC26256] >gi|829574738|gb|AKL73032.1| putative acyl-CoA transferase/carnitine dehydratase [Actinobacteria bacterium IMCC26256])

HSP 1 Score: 503.827 bits (1296), Expect = 5.109e-176
Identity = 249/384 (64.84%), Postives = 293/384 (76.30%), Query Frame = 0

Query:    2 GPLQGVKIIELAGIGPGPFAAMMLSDMDAEVIRVERSSAVNGGDPANPPKDALTRGRRSIGVDLKNPEGVEAVLKLIEQADGLIEGFRPGVTERMGLGPDDCLARNPKLVYGRMTGWGQEGPYSLAAGHDINYIALAGALEPIGRAGQAPVPPLNLVGDFGGGGMLLAFGLACGIISARSTGEGQVVDAAMVDGAAALMNMF-----WGMRANGFWNDERGTNMLDTGAPFYDVYETSDGLYVSIGSIEPQFYAELLRLSGLGEREDFPPQHSRSEWPAMKETVAELFKTKTRDEWCELMEHTDVCFAPVLSMDDAASHPHNVERGTFIEVGGLTQAGPAPRFSKTAPATPAPAAHPGQHTDDVLADFGFDADTIAGLRSSGAI 380
            GPL GV+IIELAGIGPGPFAAMML+DM A++IRVER+ +V    P N P D L RGRRSIGVDLK+PEG+E V++L+E AD LIEGFRPGVTER+GLGP+DCLARNP+LVYGRMTGWGQEGPYS AAGHDINYIALAG+L  +GRAG+ P PP+NLVGDFGGGGM LAFG+AC +  A  +GEGQVVDAAMVDG+A LM+MF     WG         ERGTN+LDTGAPFYD YET DG Y+SIGS+EPQFYAEL+    LG   D   Q     +   + T+  LF TKTRDEW  ++EH+D C+APVL M +AA HPH   RGT++E  G+TQ  PAPRFS+T  A   P A PGQHTD  L+D+GF+AD ++ LR SGAI
Sbjct:    3 GPLTGVRIIELAGIGPGPFAAMMLADMGADIIRVERAGSVRETLPENIPFDLLIRGRRSIGVDLKSPEGIEVVMRLVESADALIEGFRPGVTERLGLGPNDCLARNPRLVYGRMTGWGQEGPYSQAAGHDINYIALAGSLAHLGRAGEKPTPPINLVGDFGGGGMFLAFGVACALFEATRSGEGQVVDAAMVDGSAVLMSMFVTWPGWG---------ERGTNLLDTGAPFYDTYETKDGKYISIGSLEPQFYAELVSRLELGAEFDLATQMDPRTYEMQRSTLTALFLTKTRDEWNAILEHSDACYAPVLEMSEAAEHPHLKARGTYVEEFGVTQPAPAPRFSRTPGAIQGPPAWPGQHTDAALSDWGFNADELSALRESGAI 377

The following BLAST results are available for this feature:

BLAST of alpha-methylacyl- racemase vs. L. salmonis genes
BLAST of alpha-methylacyl- racemase vs. SwissProt
BLAST of alpha-methylacyl- racemase vs. nr

BLAST of alpha-methylacyl- racemase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAG00000001226	2.197e-93	40.52	supercontig:LSalAtl2s:LSalAtl2s11:421277:423175:1 ...	[more]

BLAST of alpha-methylacyl- racemase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|341940628\|sp\|O09174.4\|AMACR_MOUSE	1.300e-119	45.74	RecName: Full=Alpha-methylacyl-CoA racemase; AltNa...	[more]
gi\|13637497\|sp\|P70473.3\|AMACR_RAT	3.812e-117	45.79	RecName: Full=Alpha-methylacyl-CoA racemase; AltNa...	[more]
gi\|313104070\|sp\|Q9UHK6.2\|AMACR_HUMAN	1.938e-110	43.31	RecName: Full=Alpha-methylacyl-CoA racemase; AltNa...	[more]
gi\|74620364\|sp\|Q8J0F0.1\|CEFD2_ACRCH	2.389e-85	41.01	RecName: Full=Isopenicillin N epimerase component ...	[more]
gi\|29840845\|sp\|Q09618.3\|YS74_CAEEL	6.611e-59	32.74	RecName: Full=CaiB/baiF CoA-transferase family pro...	[more]
gi\|71152390\|sp\|Q9HAC7.2\|SUCHY_HUMAN	1.914e-45	29.46	RecName: Full=Succinate--hydroxymethylglutarate Co...	[more]
gi\|71152392\|sp\|Q68FU4.1\|SUCHY_RAT	2.824e-44	31.28	RecName: Full=Succinate--hydroxymethylglutarate Co...	[more]
gi\|408360016\|sp\|Q7TNE1.2\|SUCHY_MOUSE	9.213e-44	30.54	RecName: Full=Succinate--hydroxymethylglutarate Co...	[more]
gi\|667467185\|sp\|A9WGE3.1\|SCCT_CHLAA	2.314e-34	29.00	RecName: Full=Succinyl-CoA--D-citramalate CoA-tran...	[more]
gi\|19861453\|sp\|P76518.2\|ACOCT_ECOLI	4.930e-31	27.47	RecName: Full=Acetyl-CoA:oxalate CoA-transferase; ...	[more]

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BLAST of alpha-methylacyl- racemase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1251832524\|gb\|PDH69491.1\|	0.000e+0	69.29	carnitine dehydratase [Acidimicrobiales bacterium ...	[more]
gi\|745855482\|gb\|KIE52747.1\|	0.000e+0	68.24	carnitine dehydratase [marine actinobacterium MedA...	[more]
gi\|1200520411\|gb\|OUW33579.1\|	0.000e+0	67.98	carnitine dehydratase [Actinobacteria bacterium TM...	[more]
gi\|1176748538\|gb\|OQY66857.1\|	0.000e+0	66.32	carnitine dehydratase [Polyangiaceae bacterium UTP...	[more]
gi\|1200370596\|gb\|OUU89597.1\|	0.000e+0	65.35	carnitine dehydratase [Proteobacteria bacterium TM...	[more]
gi\|1200415375\|gb\|OUV32568.1\|	0.000e+0	67.19	carnitine dehydratase [bacterium TMED88]	[more]
gi\|949053543\|gb\|KRO53398.1\|	1.173e-179	63.95	carnitine dehydratase [Acidimicrobiia bacterium BA...	[more]
gi\|750188738\|ref\|WP_040492812.1\|	1.769e-178	65.79	CoA transferase [Ilumatobacter nonamiensis]	[more]
gi\|684290572\|gb\|KGA10165.1\|	1.958e-177	62.63	alpha-methylacyl-CoA racemase [actinobacterium acA...	[more]
gi\|918755401\|ref\|WP_052608267.1\|	5.109e-176	64.84	CoA transferase [Actinobacteria bacterium IMCC2625...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold7547_size3127	supercontig	scaffold7547_size3127:11..1156 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:isomerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold7547_size3127-processed-gene-0.2-mRNA-1	snap_masked-scaffold7547_size3127-processed-gene-0.2-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold7547_size3127:11..1156-

gene from alignment at scaffold7547_size3127:11..1156-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold7547_size3127-processed-gene-0.2 ID=snap_masked-scaffold7547_size3127-processed-gene-0.2|Name=alpha-methylacyl- racemase|organism=Tigriopus kingsejongensis|type=gene|length=1146bp|location=Sequence derived from alignment at scaffold7547_size3127:11..1156- (Tigriopus kingsejongensis)
ATGGGTCCATTGCAGGGTGTCAAGATCATCGAGCTCGCCGGAATCGGGCC
GGGGCCGTTTGCCGCGATGATGCTGTCCGACATGGACGCCGAGGTGATCA
GGGTCGAGCGGTCCTCGGCCGTGAATGGTGGCGACCCGGCCAACCCGCCG
AAAGACGCACTGACTCGCGGTCGGCGTTCGATCGGCGTCGACCTCAAGAA
TCCCGAGGGTGTCGAAGCCGTGCTCAAGCTCATCGAGCAGGCCGACGGCC
TCATCGAGGGATTCCGTCCCGGCGTCACCGAGCGGATGGGTCTCGGACCA
GACGACTGTCTCGCGCGGAACCCGAAGCTCGTCTACGGCCGCATGACCGG
TTGGGGCCAGGAAGGTCCCTACTCGCTCGCCGCCGGCCACGACATCAACT
ACATCGCGTTGGCCGGAGCACTCGAACCCATCGGCCGGGCAGGCCAGGCA
CCGGTGCCTCCGCTCAACCTCGTCGGCGACTTCGGCGGTGGCGGCATGCT
CCTGGCCTTCGGGCTGGCCTGTGGCATCATCTCCGCCCGTTCCACCGGTG
AAGGACAGGTCGTCGATGCGGCGATGGTCGACGGCGCCGCAGCGCTCATG
AACATGTTCTGGGGCATGCGGGCCAACGGATTCTGGAATGACGAGCGTGG
TACCAACATGCTCGACACCGGTGCGCCGTTCTACGACGTCTACGAGACGT
CTGACGGTCTCTACGTCTCGATCGGGTCGATCGAGCCCCAGTTCTACGCC
GAGCTGCTGCGGCTCTCCGGTCTCGGTGAGCGTGAGGACTTCCCACCGCA
GCACAGCCGGAGCGAGTGGCCCGCCATGAAGGAGACCGTCGCCGAACTGT
TCAAGACCAAGACCCGCGACGAGTGGTGCGAGCTCATGGAACACACCGAC
GTCTGCTTCGCCCCGGTGCTGTCGATGGACGACGCAGCCAGCCATCCTCA
CAACGTCGAGCGGGGGACCTTCATCGAGGTCGGTGGGCTCACCCAGGCCG
GACCGGCTCCTCGCTTCTCCAAGACCGCGCCGGCCACACCTGCTCCCGCG
GCCCACCCCGGTCAGCACACCGACGACGTCCTCGCCGACTTCGGCTTCGA
CGCCGACACGATCGCCGGCCTGCGTTCTTCGGGAGCGATCGCCTAG

Synonyms

The feature 'alpha-methylacyl- racemase' has the following synonyms


Synonym
Tk10844

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