transcription partial, snap_masked-scaffold75_size407189-processed-gene-0.6 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of transcription partial vs. L. salmonis genes
Match: EMLSAG00000004821 (supercontig:LSalAtl2s:LSalAtl2s254:304065:306565:-1 gene:EMLSAG00000004821 transcript:EMLSAT00000004821 description:"maker-LSalAtl2s254-augustus-gene-3.28") HSP 1 Score: 166.392 bits (420), Expect = 2.671e-48 Identity = 123/230 (53.48%), Postives = 140/230 (60.87%), Query Frame = 0 Query: 178 IRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKMTLTWPCGDPVLAAYVLQAAAASGQLPYPGLFGP--ANPFGLLPRPPFHPPPPAGMPCRPQGMMHSHPGLNVSPLGQSGSLSSPPLAGSS-SLSPSETKTTSEEAVIVDDGEDDESFFGEKRRDNFSNSSSASPPPSALALTSAPSCGQEHTELKRTGSLFQPYLDVAKK 404 IRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKMTLTWPCGDPVLAAYVLQAAAASG LPYP G ++PF +PRP HP + P +HS P + SSP L SS PSE+ S+ + + + ++ S +LT+ K + SLFQPYLD+ K Sbjct: 133 IRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKMTLTWPCGDPVLAAYVLQAAAASGGLPYPPPPGLFPSSPFHHVPRPSHHPYGGSPYP------LHSTP---------ETTTSSPFLNTSSRKQDPSESDLKSDSSPSPPPNIPSSDLYIKAEEEDADEEEEDGSETSKKSLTTT----------KNSTSLFQPYLDIEDK 337
BLAST of transcription partial vs. L. salmonis genes
Match: EMLSAG00000007689 (supercontig:LSalAtl2s:LSalAtl2s447:435167:439220:-1 gene:EMLSAG00000007689 transcript:EMLSAT00000007689 description:"maker-LSalAtl2s447-snap-gene-4.59") HSP 1 Score: 70.0922 bits (170), Expect = 6.323e-15 Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 0 Query: 183 TAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKR 235 T FT +Q RLE E+ + YISRP+R ELA L+L E IK+WFQNRR KDKR Sbjct: 17 TTFTSDQTLRLEVEYQRNEYISRPRRFELAENLDLTETQIKIWFQNRRAKDKR 69
BLAST of transcription partial vs. L. salmonis genes
Match: EMLSAG00000003864 (supercontig:LSalAtl2s:LSalAtl2s209:662907:667166:1 gene:EMLSAG00000003864 transcript:EMLSAT00000003864 description:"maker-LSalAtl2s209-snap-gene-5.14") HSP 1 Score: 72.0182 bits (175), Expect = 3.564e-14 Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 0 Query: 178 IRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKR 235 +R+ R +++ Q LEKEFL Y+S+ KR ELA LNL E IK+WFQNRRMK K+ Sbjct: 219 VRKKRKPYSKYQTLELEKEFLFNAYVSKQKRWELARNLNLTERQIKIWFQNRRMKSKK 276
BLAST of transcription partial vs. L. salmonis genes
Match: EMLSAG00000010592 (supercontig:LSalAtl2s:LSalAtl2s704:428566:452407:-1 gene:EMLSAG00000010592 transcript:EMLSAT00000010592 description:"maker-LSalAtl2s704-augustus-gene-4.20") HSP 1 Score: 68.1662 bits (165), Expect = 6.190e-14 Identity = 31/61 (50.82%), Postives = 43/61 (70.49%), Query Frame = 0 Query: 179 RRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKMT 239 +R RT FT +Q+ R+E+EF K+ Y+ P+R LAA LNL E +KVWFQNRR+K ++ M Sbjct: 78 KRARTIFTPDQLERMEQEFQKQQYVVGPERLYLAASLNLTEAQVKVWFQNRRIKWRKNHMI 138
BLAST of transcription partial vs. L. salmonis genes
Match: EMLSAG00000005186 (supercontig:LSalAtl2s:LSalAtl2s273:538220:539897:1 gene:EMLSAG00000005186 transcript:EMLSAT00000005186 description:"maker-LSalAtl2s273-snap-gene-5.22") HSP 1 Score: 67.0106 bits (162), Expect = 7.548e-14 Identity = 38/82 (46.34%), Postives = 51/82 (62.20%), Query Frame = 0 Query: 156 EHSPTH-SNSSSHNNNNNNSLENIRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQ 236 E SP+ S+ + N+ + +S + +R RTAFT QI LE EF + Y+S KR L+ LNL E IK+WFQNRR K KR+ Sbjct: 13 EDSPSSISHQNESNSGSTSSEDRKKRPRTAFTASQIKALETEFERNKYLSVSKRLFLSKNLNLTETQIKIWFQNRRTKWKRK 94
BLAST of transcription partial vs. L. salmonis genes
Match: EMLSAG00000002737 (supercontig:LSalAtl2s:LSalAtl2s158:121922:135190:-1 gene:EMLSAG00000002737 transcript:EMLSAT00000002737 description:"maker-LSalAtl2s158-augustus-gene-1.14") HSP 1 Score: 69.3218 bits (168), Expect = 4.571e-13 Identity = 32/72 (44.44%), Postives = 43/72 (59.72%), Query Frame = 0 Query: 182 RTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKM--------TLTWPCG 245 RT FT +Q+ LEKEF Y++R +R E+A L L E +K+WFQNRRMK K++ +LT CG Sbjct: 377 RTNFTTKQLTELEKEFHFNKYLTRARRIEIAGALQLNETQVKIWFQNRRMKQKKRMKEGLIPHDPSLTGECG 448
BLAST of transcription partial vs. L. salmonis genes
Match: EMLSAG00000004485 (supercontig:LSalAtl2s:LSalAtl2s233:93944:109965:1 gene:EMLSAG00000004485 transcript:EMLSAT00000004485 description:"augustus_masked-LSalAtl2s233-processed-gene-1.0") HSP 1 Score: 67.0106 bits (162), Expect = 1.154e-12 Identity = 30/58 (51.72%), Postives = 40/58 (68.97%), Query Frame = 0 Query: 179 RRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQ 236 RR R +TR Q LEKEF +Y++R +R E+A +L L E IK+WFQNRRMK K++ Sbjct: 226 RRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHQLCLTERQIKIWFQNRRMKLKKE 283
BLAST of transcription partial vs. L. salmonis genes
Match: EMLSAG00000009806 (supercontig:LSalAtl2s:LSalAtl2s639:213429:214275:-1 gene:EMLSAG00000009806 transcript:EMLSAT00000009806 description:"augustus_masked-LSalAtl2s639-processed-gene-2.3") HSP 1 Score: 66.2402 bits (160), Expect = 1.225e-12 Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 0 Query: 165 SSHNNNNNNSLENIRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKR 235 S+ +N+ S + +R RTAF+ EQ+ RL KEF + Y++ +R LAAEL L E IK+WFQN+R K K+ Sbjct: 153 SATVTSNSQSDSDEKRPRTAFSSEQLSRLRKEFDENRYLNEERRRALAAELGLNETQIKIWFQNKRAKLKK 223
BLAST of transcription partial vs. L. salmonis genes
Match: EMLSAG00000001102 (supercontig:LSalAtl2s:LSalAtl2s1183:46311:63939:1 gene:EMLSAG00000001102 transcript:EMLSAT00000001102 description:"maker-LSalAtl2s1183-snap-gene-0.3") HSP 1 Score: 64.3142 bits (155), Expect = 1.227e-12 Identity = 30/53 (56.60%), Postives = 37/53 (69.81%), Query Frame = 0 Query: 179 RRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRM 231 +R RTA+TR QI LEKEF Y++R +R E+A L L E IK+WFQNRRM Sbjct: 114 KRQRTAYTRHQILELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRM 166
BLAST of transcription partial vs. L. salmonis genes
Match: EMLSAG00000006162 (supercontig:LSalAtl2s:LSalAtl2s336:555387:556720:-1 gene:EMLSAG00000006162 transcript:EMLSAT00000006162 description:"maker-LSalAtl2s336-augustus-gene-5.12") HSP 1 Score: 67.3958 bits (163), Expect = 1.876e-12 Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 0 Query: 179 RRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKR 235 R+ RTAFT Q+ LE+ F K+ Y+S R ELAA+LNL + +K W+QNRR K KR Sbjct: 236 RKARTAFTDYQLQTLERSFEKQKYLSVQDRQELAAKLNLTDTQVKTWYQNRRTKWKR 292
BLAST of transcription partial vs. SwissProt
Match: gi|1708342|sp|P50476.1|HOX3_XENLA (RecName: Full=Homeobox protein XHOX-3) HSP 1 Score: 149.828 bits (377), Expect = 3.880e-40 Identity = 65/92 (70.65%), Postives = 76/92 (82.61%), Query Frame = 0 Query: 176 ENIRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKMTLTWP-CGDPVLAAYVLQAAAASGQLPYP 266 + +RRYRTAFTREQI RLEKEF +ENY+SRP+RCELAA LNLPE TIKVWFQNRRMKDKRQ++ +TWP DP Y++ AAA+G LPYP Sbjct: 166 DQMRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKRQRLAMTWPHPADPAFYTYMMSHAAATGNLPYP 257
BLAST of transcription partial vs. SwissProt
Match: gi|14916562|sp|Q9IA18.1|EVX2_HETFR (RecName: Full=Homeobox even-skipped homolog protein 2; AltName: Full=EVX-2) HSP 1 Score: 150.214 bits (378), Expect = 5.650e-40 Identity = 65/92 (70.65%), Postives = 77/92 (83.70%), Query Frame = 0 Query: 176 ENIRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKMTLTWPC-GDPVLAAYVLQAAAASGQLPYP 266 + +RRYRTAFTREQIGRLEKEF +ENY+SRP+RCELAA LNLPE TIKVWFQNRRMKDKRQ++ ++WP DP Y++ AAA+G LPYP Sbjct: 177 DQVRRYRTAFTREQIGRLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKRQRLAMSWPHPADPSFYTYMMTHAAATGSLPYP 268
BLAST of transcription partial vs. SwissProt
Match: gi|1352398|sp|P49640.1|EVX1_HUMAN (RecName: Full=Homeobox even-skipped homolog protein 1; AltName: Full=EVX-1) HSP 1 Score: 149.058 bits (375), Expect = 1.172e-39 Identity = 65/92 (70.65%), Postives = 76/92 (82.61%), Query Frame = 0 Query: 176 ENIRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKMTLTWP-CGDPVLAAYVLQAAAASGQLPYP 266 + +RRYRTAFTREQI RLEKEF +ENY+SRP+RCELAA LNLPE TIKVWFQNRRMKDKRQ++ +TWP DP Y++ AAA+G LPYP Sbjct: 181 DQMRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKRQRLAMTWPHPADPAFYTYMMSHAAAAGGLPYP 272
BLAST of transcription partial vs. SwissProt
Match: gi|119664|sp|P23683.1|EVX1_MOUSE (RecName: Full=Homeobox even-skipped homolog protein 1; AltName: Full=EVX-1) HSP 1 Score: 149.058 bits (375), Expect = 1.493e-39 Identity = 65/92 (70.65%), Postives = 76/92 (82.61%), Query Frame = 0 Query: 176 ENIRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKMTLTWP-CGDPVLAAYVLQAAAASGQLPYP 266 + +RRYRTAFTREQI RLEKEF +ENY+SRP+RCELAA LNLPE TIKVWFQNRRMKDKRQ++ +TWP DP Y++ AAA+G LPYP Sbjct: 181 DQMRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKRQRLAMTWPHPADPAFYTYMMSHAAAAGGLPYP 272
BLAST of transcription partial vs. SwissProt
Match: gi|1706722|sp|P49749.1|EVX2_MOUSE (RecName: Full=Homeobox even-skipped homolog protein 2; AltName: Full=EVX-2) HSP 1 Score: 148.673 bits (374), Expect = 6.454e-39 Identity = 64/92 (69.57%), Postives = 76/92 (82.61%), Query Frame = 0 Query: 176 ENIRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKMTLTWP-CGDPVLAAYVLQAAAASGQLPYP 266 + +RRYRTAFTREQI RLEKEF +ENY+SRP+RCELAA LNLPE TIKVWFQNRRMKDKRQ++ ++WP DP Y++ AAA+G LPYP Sbjct: 189 DQVRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKRQRLAMSWPHPADPSFYTYMMTHAAATGSLPYP 280
BLAST of transcription partial vs. SwissProt
Match: gi|12231013|sp|Q03828.2|EVX2_HUMAN (RecName: Full=Homeobox even-skipped homolog protein 2; AltName: Full=EVX-2) HSP 1 Score: 148.288 bits (373), Expect = 8.621e-39 Identity = 64/92 (69.57%), Postives = 76/92 (82.61%), Query Frame = 0 Query: 176 ENIRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKMTLTWPC-GDPVLAAYVLQAAAASGQLPYP 266 + +RRYRTAFTREQI RLEKEF +ENY+SRP+RCELAA LNLPE TIKVWFQNRRMKDKRQ++ ++WP DP Y++ AAA+G LPYP Sbjct: 186 DQVRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKRQRLAMSWPHPADPSFYTYMMTHAAATGSLPYP 277
BLAST of transcription partial vs. SwissProt
Match: gi|12644102|sp|P06602.3|EVE_DROME (RecName: Full=Segmentation protein even-skipped) HSP 1 Score: 143.665 bits (361), Expect = 7.359e-38 Identity = 63/88 (71.59%), Postives = 75/88 (85.23%), Query Frame = 0 Query: 177 NIRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKMTLTWPCG----DPVLAAYVLQAAAAS 260 ++RRYRTAFTR+Q+GRLEKEF KENY+SRP+RCELAA+LNLPE+TIKVWFQNRRMKDKRQ++ + WP DP AA +LQAAA S Sbjct: 69 SVRRYRTAFTRDQLGRLEKEFYKENYVSRPRRCELAAQLNLPESTIKVWFQNRRMKDKRQRIAVAWPYAAVYSDPAFAASILQAAANS 156
BLAST of transcription partial vs. SwissProt
Match: gi|2842728|sp|Q93899.2|VAB7_CAEEL (RecName: Full=Homeobox protein vab-7) HSP 1 Score: 122.865 bits (307), Expect = 2.153e-31 Identity = 60/89 (67.42%), Postives = 70/89 (78.65%), Query Frame = 0 Query: 167 HNNNNNNSLENIRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKM-TLTWPCGDPVLAAYVL 254 H+ +N +RRYRTAF+REQIGRLE+EF KENY+SR R ELAAELNLPE TIKVWFQNRRMKDKRQ++ L WP P +AAY+L Sbjct: 57 HHPYDNRDDGQMRRYRTAFSREQIGRLEREFAKENYVSRKTRGELAAELNLPEGTIKVWFQNRRMKDKRQRVGGLAWPF-PPQMAAYML 144
BLAST of transcription partial vs. SwissProt
Match: gi|123316|sp|P17138.1|HMA2_HELTR (RecName: Full=Homeobox protein HTR-A2) HSP 1 Score: 77.411 bits (189), Expect = 7.308e-17 Identity = 35/59 (59.32%), Postives = 45/59 (76.27%), Query Frame = 0 Query: 179 RRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQK 237 +R RTA++R Q+ LEKEF + YISRP+R ELA+ LNL E IK+WFQNRRMK K+ + Sbjct: 2 KRTRTAYSRSQLFELEKEFHFDKYISRPRRVELASSLNLTERHIKIWFQNRRMKWKKME 60
BLAST of transcription partial vs. SwissProt
Match: gi|32470599|sp|P31264.2|HMPB_DROME (RecName: Full=Homeotic protein proboscipedia) HSP 1 Score: 85.8853 bits (211), Expect = 9.670e-17 Identity = 43/89 (48.31%), Postives = 56/89 (62.92%), Query Frame = 0 Query: 160 THSNSSSHNNNNNNSLENI-------RRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKMTLT 241 T SS++NN +NS+ RR RTA+T Q+ LEKEF Y+ RP+R E+AA L+L E +KVWFQNRRMK KRQ ++ T Sbjct: 173 TSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKT 261
BLAST of transcription partial vs. nr
Match: gi|1325297367|ref|XP_023331178.1| (homeobox even-skipped homolog protein 2-like [Eurytemora affinis]) HSP 1 Score: 175.637 bits (444), Expect = 2.284e-48 Identity = 87/116 (75.00%), Postives = 95/116 (81.90%), Query Frame = 0 Query: 171 NNNSLENIRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKMTLTWPCGDPVLAAYVLQAAAASGQLPYPGLFGPANPFGLLPRPPFHPP 286 + N+L+ IRRYRTAFTREQIG+LEKEFLKENYISRPKRCELA ELNLPENTIKVWFQNRRMKDKRQKM WPCGDP+L+AY+LQAAA+S PYP F P LLP P H P Sbjct: 119 DQNALDAIRRYRTAFTREQIGKLEKEFLKENYISRPKRCELAHELNLPENTIKVWFQNRRMKDKRQKM--IWPCGDPILSAYLLQAAASS---PYP--FSP-----LLPHLPMHRP 222
BLAST of transcription partial vs. nr
Match: gi|529249803|emb|CDF52132.1| (transcription factor, partial [Euperipatoides kanangrensis]) HSP 1 Score: 170.244 bits (430), Expect = 1.276e-46 Identity = 109/248 (43.95%), Postives = 140/248 (56.45%), Query Frame = 0 Query: 91 QHLNQQQHQSPHSSVNPGHAHHHGNGDLDSPVKGLASAFAGIGSDRDENVCHSGGSGEDRSPKRQEHSPTHSNSSSHNNNNNNSLENIRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKMTLTWPCGDPVLAAYVLQAAAASGQLPYP----GLFGPANPFGLLPRPPFHPPPPAGMPCRPQGMMHSHPGLNVSPLGQSGSLSS----PPLAGSSSLSPS 330 + L+ Q +P +N + DLD+ G + + D + S DR QEH+ N S N+ N+RRYRTAFTREQI RLEKEF +ENY+SRP+RCELAA LNLPE+TIKVWFQNRRMKDKRQ+M L+WP DP AAY+L AAASG PYP +G L R P+H P G+ RP+ + HP + +PLG S L++ PP++ S +PS Sbjct: 22 EDLSLQHPNTPRCKLNADIQNKKLASDLDN---GESRGMCDVWKDSSDAEDKSLEGSNDRLIS-QEHNNNLINKSPTQKENHFDDNNVRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPESTIKVWFQNRRMKDKRQRMALSWPYADPHFAAYMLN-AAASGAYPYPIPNSVPLTYYTSYG-LSRGPYH---PYGLSLRPRTDLLPHPYIR-APLGGSDGLTAAPPPPPISCSQHGTPS 259
BLAST of transcription partial vs. nr
Match: gi|961993239|ref|XP_014826724.1| (PREDICTED: homeobox even-skipped homolog protein 2 isoform X2 [Poecilia mexicana] >gi|1025427856|ref|XP_016524212.1| PREDICTED: homeobox even-skipped homolog protein 2 isoform X2 [Poecilia formosa] >gi|1039380969|ref|XP_017164235.1| PREDICTED: homeobox even-skipped homolog protein 2 isoform X2 [Poecilia reticulata]) HSP 1 Score: 156.377 bits (394), Expect = 2.723e-41 Identity = 69/105 (65.71%), Postives = 85/105 (80.95%), Query Frame = 0 Query: 163 NSSSHNNNNNNSLENIRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKMTLTWP-CGDPVLAAYVLQAAAASGQLPYP 266 N +S +NN++ + +RRYRTAFTREQIGRLEKEF +ENY+SRP+RCELAA LNLPE TIKVWFQNRRMKDKRQ++ ++WP DP Y++ AAA+G LPYP Sbjct: 2 NGNSAGGSNNSNTDQVRRYRTAFTREQIGRLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKRQRLAMSWPHPADPSFYTYMMTHAAATGSLPYP 106
BLAST of transcription partial vs. nr
Match: gi|139152591|gb|ABO77128.1| (even-skipped 2 [Strigamia maritima]) HSP 1 Score: 158.303 bits (399), Expect = 2.810e-41 Identity = 90/172 (52.33%), Postives = 108/172 (62.79%), Query Frame = 0 Query: 160 THSNSSSHNNNNNNSLENIRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKMTLTWPCGDPVLAAYVLQAAAASGQLPYPGLFG--PANPFGLLPRPPFHPPPPAGMPCRPQGMMHSHPGLNVSPLGQSGSLSSPPLAGSSSLSP 329 T S S + + + + IRRYRTAFTREQI RLEKEF +ENY+SRP+RCELAAELNLPE+TIKVWFQNRRMKDKRQ+MT TWP DP AA VLQ AA+G PYP L P N +G L + P +P R Q + + L+ + PP+ S LSP Sbjct: 89 TRSAEKSATDFDGDDVGQIRRYRTAFTREQITRLEKEFFRENYVSRPRRCELAAELNLPESTIKVWFQNRRMKDKRQRMT-TWPYADPHFAACVLQ--AATGTYPYPALPNSLPINYYGNLGLNRYQ---PYALPLRSQNSLFASSYLHSQGMELDSMALVPPM---SPLSP 251
BLAST of transcription partial vs. nr
Match: gi|1168983785|ref|XP_020452072.1| (homeobox even-skipped homolog protein 2 [Monopterus albus]) HSP 1 Score: 157.532 bits (397), Expect = 4.384e-41 Identity = 69/105 (65.71%), Postives = 85/105 (80.95%), Query Frame = 0 Query: 163 NSSSHNNNNNNSLENIRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKMTLTWPC-GDPVLAAYVLQAAAASGQLPYP 266 N +S +NN++ + +RRYRTAFTREQIGRLEKEF +ENY+SRP+RCELAA LNLPE TIKVWFQNRRMKDKRQ++ ++WP DP Y++ AAA+G LPYP Sbjct: 152 NGNSTGGSNNSNTDQVRRYRTAFTREQIGRLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKRQRLAMSWPHPADPSFYTYMMTHAAATGSLPYP 256
BLAST of transcription partial vs. nr
Match: gi|910344512|ref|XP_013176080.1| (PREDICTED: segmentation protein even-skipped isoform X2 [Papilio xuthus]) HSP 1 Score: 154.066 bits (388), Expect = 5.191e-41 Identity = 85/140 (60.71%), Postives = 98/140 (70.00%), Query Frame = 0 Query: 151 SPKRQEHSPTHSNSSSHNNNNNNSLENIRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKMTLTWPCG----DPVLAAYVLQAAAASGQLPYPGLFGPANPFGLLPRPPFHPP 286 SPK +E S S N+N NIRRYRTAFTREQ+ RLEKEF+KENY+SRP+RCELAA+L LPE+TIKVWFQNRRMKDKRQ++ + WP DP AA +LQAAA+S LPY G PA LL PPFH P Sbjct: 41 SPKSKESLSPQSEQIS--NSNTAPDPNIRRYRTAFTREQLARLEKEFMKENYVSRPRRCELAAQLQLPESTIKVWFQNRRMKDKRQRIAVAWPYAAVYSDPAFAASILQAAASSVGLPY-GYPSPA----LL--PPFHNP 171
BLAST of transcription partial vs. nr
Match: gi|83016974|dbj|BAE53495.1| (even-skipped homologue 2 [Oryzias latipes]) HSP 1 Score: 156.377 bits (394), Expect = 5.380e-41 Identity = 71/105 (67.62%), Postives = 86/105 (81.90%), Query Frame = 0 Query: 163 NSSSHNNNNNNSLENIRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKMTLTWPC-GDPVLAAYVLQAAAASGQLPYP 266 N S+ +NN+NS + +RRYRTAFTREQIGRLEKEF +ENY+SRP+RCELAA LNLPE TIKVWFQNRRMKDKRQ++ ++WP DP Y++ AAA+G LPYP Sbjct: 157 NGSTGGSNNSNS-DQVRRYRTAFTREQIGRLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKRQRLAMSWPHPADPSFYTYMMTHAAATGSLPYP 260
BLAST of transcription partial vs. nr
Match: gi|768443666|ref|XP_011563656.1| (PREDICTED: segmentation protein even-skipped [Plutella xylostella]) HSP 1 Score: 156.377 bits (394), Expect = 5.488e-41 Identity = 81/126 (64.29%), Postives = 92/126 (73.02%), Query Frame = 0 Query: 165 SSHNNNNNNSLENIRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKMTLTWPCG----DPVLAAYVLQAAAASGQLPYPGLFGPANPFGLLPRPPFHPP 286 S N N+ NIRRYRTAFTREQ+ RLEKEF KENY+SRP+RCELAA+LNLPE+TIKVWFQNRRMKDKRQ++ + WP DP AA +LQAAA+S LPY G P GLL PPFH P Sbjct: 134 SEQTNPNSAPDPNIRRYRTAFTREQLARLEKEFFKENYVSRPRRCELAAQLNLPESTIKVWFQNRRMKDKRQRIAVAWPYAAVYSDPAFAASILQAAASSVGLPY-GYPSP----GLL--PPFHNP 252
BLAST of transcription partial vs. nr
Match: gi|1344806999|ref|XP_023946224.1| (segmentation protein even-skipped-like isoform X2 [Bicyclus anynana]) HSP 1 Score: 153.295 bits (386), Expect = 7.809e-41 Identity = 77/114 (67.54%), Postives = 88/114 (77.19%), Query Frame = 0 Query: 177 NIRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKMTLTWPCG----DPVLAAYVLQAAAASGQLPYPGLFGPANPFGLLPRPPFHPP 286 NIRRYRTAFTREQ+ RLEKEF+KENY+SRP+RCELAA+L LPE+TIKVWFQNRRMKDKRQ++ + WP DP AA +LQAAA+S LPY G PA LL PPFH P Sbjct: 57 NIRRYRTAFTREQLARLEKEFMKENYVSRPRRCELAAQLQLPESTIKVWFQNRRMKDKRQRIAVAWPYAAVYSDPAFAASILQAAASSVGLPY-GYPSPA----LL--PPFHNP 163
BLAST of transcription partial vs. nr
Match: gi|1209685394|gb|OWR41857.1| (segmentation protein even-skipped [Danaus plexippus plexippus]) HSP 1 Score: 155.221 bits (391), Expect = 8.295e-41 Identity = 94/186 (50.54%), Postives = 118/186 (63.44%), Query Frame = 0 Query: 105 VNPGHAHHHGNGDLDSPVKGLASAFAGIGSDRDENVCHSGGSGEDRSPKRQEHSPTHSNSSSHNNNNNNSLENIRRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKMTLTWPCG----DPVLAAYVLQAAAASGQLPYPGLFGPANPFGLLPRPPFHPP 286 +N G+ HG DL G S + + SD ++ H E SP+ + P +++SS+ + NIRRYRTAFTREQ+ RLEKEF+KENY+SRP+RCELAA+L LPE+TIKVWFQNRRMKDKRQ++ + WP DP AA +LQAAA+S LPY G P GLL PPFH P Sbjct: 69 MNNGYPESHGAEDLKRASPG--SVRSEVDSDGADDRPH-----ESLSPQSE---PINTSSSAPD-------PNIRRYRTAFTREQLARLEKEFMKENYVSRPRRCELAAQLQLPESTIKVWFQNRRMKDKRQRIAVAWPYAAVYSDPAFAASILQAAASSVGLPY-GYPSP----GLL--PPFHNP 230 The following BLAST results are available for this feature:
BLAST of transcription partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
Pagesback to top
BLAST of transcription partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of transcription partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold75_size407189:1973..7299- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold75_size407189-processed-gene-0.6 ID=snap_masked-scaffold75_size407189-processed-gene-0.6|Name=transcription partial|organism=Tigriopus kingsejongensis|type=gene|length=5327bp|location=Sequence derived from alignment at scaffold75_size407189:1973..7299- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'transcription partial' has the following synonyms
Add to Basket
|