transformer-2 protein homolog beta isoform x2, snap_masked-scaffold920_size81105-processed-gene-0.5 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of transformer-2 protein homolog beta isoform x2 vs. L. salmonis genes
Match: EMLSAG00000012522 (supercontig:LSalAtl2s:LSalAtl2s922:267828:272714:1 gene:EMLSAG00000012522 transcript:EMLSAT00000012522 description:"maker-LSalAtl2s922-augustus-gene-3.25") HSP 1 Score: 216.853 bits (551), Expect = 2.211e-71 Identity = 98/116 (84.48%), Postives = 109/116 (93.97%), Query Frame = 0 Query: 73 PMSNRRRHVGTREAPTATSCVGVFGLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFSITKRPHTPTPGVYMGRPTYAG 188 PMSNRRRHVG+R+AP T+C+G+FGLSLYTTERELEKEFS+FGP+EKV VVLDGKTGRSRGFAFVY+ES+ED+KAAKEAMCDQEIDGRRIRVD+SITKRPHTPTPG YMGRPT Sbjct: 54 PMSNRRRHVGSRDAPEVTNCLGIFGLSLYTTERELEKEFSKFGPIEKVTVVLDGKTGRSRGFAFVYFESLEDSKAAKEAMCDQEIDGRRIRVDYSITKRPHTPTPGXYMGRPTLMA 169
BLAST of transformer-2 protein homolog beta isoform x2 vs. L. salmonis genes
Match: EMLSAG00000008559 (supercontig:LSalAtl2s:LSalAtl2s527:273623:274748:-1 gene:EMLSAG00000008559 transcript:EMLSAT00000008559 description:"augustus_masked-LSalAtl2s527-processed-gene-1.22") HSP 1 Score: 113.235 bits (282), Expect = 1.360e-29 Identity = 54/102 (52.94%), Postives = 75/102 (73.53%), Query Frame = 0 Query: 81 VGTREAPTATSCVGVFGLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFSITKRPHTPTPGVYMG 182 + R+ P A++ +GVFGLS T E +L +EFSRFG LE +++V D + RSRGF F+ ++ VEDAK A+ A+CD +DG++IRVDFS+TK PH TPG Y+G Sbjct: 220 MXDRDNPPASNVLGVFGLSYSTDEHDLNREFSRFGALESIRIVRDPER-RSRGFGFIDFKYVEDAKQARRALCDTYLDGKKIRVDFSLTKEPHGRTPGRYLG 320
BLAST of transformer-2 protein homolog beta isoform x2 vs. L. salmonis genes
Match: EMLSAG00000000622 (supercontig:LSalAtl2s:LSalAtl2s109:667973:669995:-1 gene:EMLSAG00000000622 transcript:EMLSAT00000000622 description:"maker-LSalAtl2s109-snap-gene-6.33") HSP 1 Score: 59.3066 bits (142), Expect = 2.647e-10 Identity = 31/77 (40.26%), Postives = 46/77 (59.74%), Query Frame = 0 Query: 91 SCVGVFGLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFS 167 + + V L+ TT+ +LE F+RFG + +V+ D KTG S +AF+ ++S E + A M + ID RRI VDFS Sbjct: 200 NVLFVCKLNPVTTDEDLEIIFARFGKVVTCEVIRDRKTGDSLQYAFIEFDSHEACEKAYFKMDNVLIDDRRIHVDFS 276
BLAST of transformer-2 protein homolog beta isoform x2 vs. L. salmonis genes
Match: EMLSAG00000006016 (supercontig:LSalAtl2s:LSalAtl2s326:613325:614754:1 gene:EMLSAG00000006016 transcript:EMLSAT00000006016 description:"augustus_masked-LSalAtl2s326-processed-gene-5.2") HSP 1 Score: 56.225 bits (134), Expect = 2.128e-9 Identity = 28/71 (39.44%), Postives = 43/71 (60.56%), Query Frame = 0 Query: 97 GLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFS 167 GL+ E+ L+ F FG + +VQ+ +D +T + RGFAF+ YE D AA + M D E+ GR +RV+ + Sbjct: 14 GLAEEVEEKVLKAAFIPFGEITEVQIPIDYQTEKHRGFAFIXYEEPXDXXAAIDNMHDSELFGRTLRVNLA 84
BLAST of transformer-2 protein homolog beta isoform x2 vs. L. salmonis genes
Match: EMLSAG00000003333 (supercontig:LSalAtl2s:LSalAtl2s182:509525:511178:-1 gene:EMLSAG00000003333 transcript:EMLSAT00000003333 description:"maker-LSalAtl2s182-augustus-gene-5.31") HSP 1 Score: 53.1434 bits (126), Expect = 2.630e-8 Identity = 30/75 (40.00%), Postives = 43/75 (57.33%), Query Frame = 0 Query: 98 LSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFSITKRP 172 L TE L F FG + +Q+++D TGRS+G+ F+ Y EDAK A E M E+ GR I+V ++ +RP Sbjct: 243 LHFDITEEMLRGIFEPFGKIMSIQLMMDTDTGRSKGYGFLTYAEAEDAKKALEQMNGFELAGRPIKVG-TVNERP 316
BLAST of transformer-2 protein homolog beta isoform x2 vs. L. salmonis genes
Match: EMLSAG00000008938 (supercontig:LSalAtl2s:LSalAtl2s556:241652:266229:-1 gene:EMLSAG00000008938 transcript:EMLSAT00000008938 description:"maker-LSalAtl2s556-snap-gene-2.16") HSP 1 Score: 52.373 bits (124), Expect = 3.579e-8 Identity = 28/72 (38.89%), Postives = 45/72 (62.50%), Query Frame = 0 Query: 97 GLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAK-AAKEAMCDQEIDGRRIRVDFS 167 GL +TT++ L + F FG +E+ V+ D TG+SRG+ FV ++ +DA+ A KE + IDGR+ V+ + Sbjct: 58 GLPYHTTDKSLREHFEVFGEIEEAVVITDRTTGKSRGYGFVIMQNKDDAERACKEP--NPIIDGRKXNVNLA 127
BLAST of transformer-2 protein homolog beta isoform x2 vs. L. salmonis genes
Match: EMLSAG00000011611 (supercontig:LSalAtl2s:LSalAtl2s802:191320:192087:-1 gene:EMLSAG00000011611 transcript:EMLSAT00000011611 description:"augustus_masked-LSalAtl2s802-processed-gene-2.1") HSP 1 Score: 50.0618 bits (118), Expect = 1.423e-7 Identity = 27/73 (36.99%), Postives = 43/73 (58.90%), Query Frame = 0 Query: 102 TTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFSITKRPHT 174 T+ EL F GPL + +++ D K+G S G+ FV+YE+ +DAK A E + I + I+V ++ RP+T Sbjct: 41 MTDNELFSMFVTCGPLVQARIIRDRKSGYSFGYGFVHYENPKDAKRAIETLSGLAIQNKTIKVSYA---RPNT 110
BLAST of transformer-2 protein homolog beta isoform x2 vs. SwissProt
Match: gi|51703329|sp|P62997.1|TRA2B_RAT (RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta; Short=TRA2-beta; AltName: Full=RA301; AltName: Full=Splicing factor, arginine/serine-rich 10; AltName: Full=Transformer-2 protein homolog B >gi|51703330|sp|P62995.1|TRA2B_HUMAN RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta; Short=TRA2-beta; Short=hTRA2-beta; AltName: Full=Splicing factor, arginine/serine-rich 10; AltName: Full=Transformer-2 protein homolog B >gi|51703331|sp|P62996.1|TRA2B_MOUSE RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta; Short=TRA2-beta; AltName: Full=Silica-induced gene 41 protein; Short=SIG-41; AltName: Full=Splicing factor, arginine/serine-rich 10; AltName: Full=Transformer-2 protein homolog B >gi|122143022|sp|Q3ZBT6.1|TRA2B_BOVIN RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta; Short=TRA2-beta; AltName: Full=Splicing factor, arginine/serine-rich 10; AltName: Full=Transformer-2 protein homolog B) HSP 1 Score: 180.259 bits (456), Expect = 2.937e-54 Identity = 82/119 (68.91%), Postives = 96/119 (80.67%), Query Frame = 0 Query: 68 SHSRSPMSNRRRHVGTREAPTATSCVGVFGLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFSITKRPHTPTPGVYMGRPTY 186 SHS SPMS RRRHVG R P C+GVFGLSLYTTER+L + FS++GP+ V +V D ++ RSRGFAFVY+E+V+DAK AKE E+DGRRIRVDFSITKRPHTPTPG+YMGRPTY Sbjct: 95 SHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTY 213
BLAST of transformer-2 protein homolog beta isoform x2 vs. SwissProt
Match: gi|51701959|sp|Q6PFR5.1|TRA2A_MOUSE (RecName: Full=Transformer-2 protein homolog alpha; Short=TRA-2 alpha; Short=TRA2-alpha; AltName: Full=Transformer-2 protein homolog A) HSP 1 Score: 167.933 bits (424), Expect = 1.663e-49 Identity = 78/116 (67.24%), Postives = 94/116 (81.03%), Query Frame = 0 Query: 72 SPMSNRRRHVGTREAPTATSCVGVFGLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFSITKRPHTPTPGVYMGRPTYA 187 SPMSNRRRH G+R P +C+GVFGLSLYTTER+L + FSR+GPL V VV D +TGRSRGFAFVY+E ++D+K A E E+DGRRIRVD+SITKR HTPTPG+YMGRPT++ Sbjct: 98 SPMSNRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHS 213
BLAST of transformer-2 protein homolog beta isoform x2 vs. SwissProt
Match: gi|4033480|sp|Q13595.1|TRA2A_HUMAN (RecName: Full=Transformer-2 protein homolog alpha; Short=TRA-2 alpha; Short=TRA2-alpha; AltName: Full=Transformer-2 protein homolog A) HSP 1 Score: 167.933 bits (424), Expect = 1.709e-49 Identity = 78/116 (67.24%), Postives = 94/116 (81.03%), Query Frame = 0 Query: 72 SPMSNRRRHVGTREAPTATSCVGVFGLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFSITKRPHTPTPGVYMGRPTYA 187 SPMSNRRRH G+R P +C+GVFGLSLYTTER+L + FSR+GPL V VV D +TGRSRGFAFVY+E ++D+K A E E+DGRRIRVD+SITKR HTPTPG+YMGRPT++ Sbjct: 100 SPMSNRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHS 215
BLAST of transformer-2 protein homolog beta isoform x2 vs. SwissProt
Match: gi|3929384|sp|O02008.1|TRA2_DROVI (RecName: Full=Transformer-2 sex-determining protein) HSP 1 Score: 142.124 bits (357), Expect = 9.271e-40 Identity = 60/110 (54.55%), Postives = 88/110 (80.00%), Query Frame = 0 Query: 76 NRRRHVGTREAPTATSCVGVFGLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFSITKRPHTPTPGVYMGRPT 185 +R+R R+ P A+ C+GVFGL+ TT++++ + F++FGP+E++Q+V+D T RSRGF F+Y+E++ DA+ AK+A E+DGRRIRVD+SIT+R HTPTPGVYMGRP+ Sbjct: 90 DRQRMRQARDHPQASRCIGVFGLNTNTTQQKVRELFNKFGPIERIQMVIDAHTHRSRGFCFIYFENLGDARVAKDACTGMEVDGRRIRVDYSITQRAHTPTPGVYMGRPS 199
BLAST of transformer-2 protein homolog beta isoform x2 vs. SwissProt
Match: gi|136128|sp|P19018.1|TRA2_DROME (RecName: Full=Transformer-2 sex-determining protein) HSP 1 Score: 139.428 bits (350), Expect = 9.075e-39 Identity = 58/108 (53.70%), Postives = 86/108 (79.63%), Query Frame = 0 Query: 76 NRRRHVGTREAPTATSCVGVFGLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFSITKRPHTPTPGVYMGR 183 +R R +RE P A+ C+GVFGL+ T++ ++ + F+++GP+E++Q+V+D +T RSRGF F+Y+E + DA+AAK++ E+DGRRIRVDFSIT+R HTPTPGVY+GR Sbjct: 82 DRERMHKSREHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGR 189
BLAST of transformer-2 protein homolog beta isoform x2 vs. SwissProt
Match: gi|74997199|sp|Q54Y98.1|TRA2_DICDI (RecName: Full=Transformer-2 protein homolog) HSP 1 Score: 124.02 bits (310), Expect = 2.755e-32 Identity = 83/174 (47.70%), Postives = 104/174 (59.77%), Query Frame = 0 Query: 27 SRSRSPRYSRRYSRSRSRSYSPRGGSKYGGGGSAAGGSRRR--SHSR--SPMSNRRRHVGT--------REAPTAT--SCVGVFGLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFSITKRPHTPTPGVYMGRPTY 186 SR RSP R SR RS PRGGS GG GGS R S +R SP + +R G R A TA+ + +GVFGL+ T ER+L+ EFSRFG ++ V +++D KTGRS+ F FVY+E+ EDA AKE D ++ G+ IR DFS TK+PH PTPG Y G P Y Sbjct: 40 SRERSP--PRGNSRERS---PPRGGSPNRGGSPNRGGSPNRGGSPNRGGSPSRDDKRRYGNGGNGETRNRLANTASPSNVLGVFGLAPQTEERDLKDEFSRFGKIDHVDLIMDRKTGRSKCFGFVYFENKEDAVRAKEECQDLQLHGKSIRTDFSATKKPHEPTPGKYFGNPRY 208
BLAST of transformer-2 protein homolog beta isoform x2 vs. SwissProt
Match: gi|5921786|sp|Q14011.1|CIRBP_HUMAN (RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18 hnRNP; AltName: Full=Glycine-rich RNA-binding protein CIRP >gi|75070980|sp|Q5RF83.1|CIRBP_PONAB RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=Glycine-rich RNA-binding protein CIRP) HSP 1 Score: 77.7962 bits (190), Expect = 2.488e-16 Identity = 36/69 (52.17%), Postives = 50/69 (72.46%), Query Frame = 0 Query: 97 GLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVD 165 GLS T E+ LE+ FS++G + +V VV D +T RSRGF FV +E+++DAK A AM + +DGR+IRVD Sbjct: 12 GLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVD 80
BLAST of transformer-2 protein homolog beta isoform x2 vs. SwissProt
Match: gi|46395643|sp|P60826.1|CIRBP_CRIGR (RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18 hnRNP; AltName: Full=Glycine-rich RNA-binding protein CIRP >gi|46397383|sp|P60825.1|CIRBP_RAT RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18 hnRNP; AltName: Full=Glycine-rich RNA-binding protein CIRP >gi|46397384|sp|P60824.1|CIRBP_MOUSE RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18 hnRNP; AltName: Full=Glycine-rich RNA-binding protein CIRP) HSP 1 Score: 77.411 bits (189), Expect = 3.149e-16 Identity = 36/69 (52.17%), Postives = 50/69 (72.46%), Query Frame = 0 Query: 97 GLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVD 165 GLS T E+ LE+ FS++G + +V VV D +T RSRGF FV +E+++DAK A AM + +DGR+IRVD Sbjct: 12 GLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVD 80
BLAST of transformer-2 protein homolog beta isoform x2 vs. SwissProt
Match: gi|229485954|sp|P0C8Z4.1|RMXL3_PANTR (RecName: Full=RNA-binding motif protein, X-linked-like-3) HSP 1 Score: 78.1814 bits (191), Expect = 5.144e-15 Identity = 46/108 (42.59%), Postives = 65/108 (60.19%), Query Frame = 0 Query: 93 VGVFGLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFSI-----TKRPHTPTPGVYMGRPTYAGESRGGGS 195 + V GL+L T E+ L+ EF ++G + KV ++ D KT +SRGFAFV +ES DAKAA M + +DG+ I V +I + R PTPG R ++ +RGGGS Sbjct: 10 LFVGGLNLKTDEKALKAEFGKYGHIIKVFLIKDRKTNKSRGFAFVTFESPADAKAAARDMNGKYLDGKAIMVAQTIKPAFESSRWVPPTPGS-GSRSRFSHRTRGGGS 116
BLAST of transformer-2 protein homolog beta isoform x2 vs. SwissProt
Match: gi|229485971|sp|Q8N7X1.2|RMXL3_HUMAN (RecName: Full=RNA-binding motif protein, X-linked-like-3) HSP 1 Score: 77.0258 bits (188), Expect = 1.269e-14 Identity = 45/108 (41.67%), Postives = 65/108 (60.19%), Query Frame = 0 Query: 93 VGVFGLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFSI-----TKRPHTPTPGVYMGRPTYAGESRGGGS 195 + + GL+L T E+ L+ EF ++G + KV ++ D KT +SRGFAFV +ES DAKAA M + +DG+ I V +I + R PTPG R ++ +RGGGS Sbjct: 10 LFIGGLNLKTDEKALKAEFGKYGHIIKVFLMKDRKTNKSRGFAFVTFESPADAKAAARDMNGKYLDGKAIMVAQTIKPAFKSSRWVPPTPGS-GSRSRFSHRTRGGGS 116
BLAST of transformer-2 protein homolog beta isoform x2 vs. nr
Match: gi|1209688657|gb|OWR43939.1| (transformer 2 isoform D [Danaus plexippus plexippus]) HSP 1 Score: 192.971 bits (489), Expect = 4.743e-57 Identity = 101/172 (58.72%), Postives = 120/172 (69.77%), Query Frame = 0 Query: 66 RRSHSRSPMSNRRRHVGTREAPTATSCVGVFGLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFSITKRPHTPTPGVYMGRPTYAGESRGGGSRGSRGGGGGGGGGDYGGRGGGGGGGGGGRGGDGY-HRSPSPY 236 RRSHS SPMS+RRRH+G RE PT + C+GVFGLSLYTTE+++ FS+FGP++KVQVV+D KTGRSRGF FVY+ES +DAK AK EIDGRRIRVD+SIT+R HTPTPG+YMG+PT+ G R R DY RGGG GY HRSPSP+ Sbjct: 81 RRSHSHSPMSSRRRHLGDRENPTPSRCLGVFGLSLYTTEQQIHHIFSKFGPVDKVQVVIDAKTGRSRGFCFVYFESQDDAKVAKNECTGMEIDGRRIRVDYSITQRAHTPTPGIYMGKPTHVRGDNGYDRRRDR----DPAHSDYYYRGGGYRERERDYYARGYRHRSPSPH 248
BLAST of transformer-2 protein homolog beta isoform x2 vs. nr
Match: gi|657799728|ref|XP_008326982.1| (PREDICTED: transformer-2 protein homolog beta isoform X2 [Cynoglossus semilaevis]) HSP 1 Score: 190.274 bits (482), Expect = 6.981e-56 Identity = 104/184 (56.52%), Postives = 117/184 (63.59%), Query Frame = 0 Query: 62 GGSRRRSHSRSPMSNRRRHVGTREAPTATSCVGVFGLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFSITKRPHTPTPGVYMGRPTYAGESRGGGSRGSRGGGGGGGGGDYGGRGGGGGGGGGGRGGD-----GYHRSPSPYYRGG 240 G R RSHS SPMSNRRRH+G R P C+GVFGLSLYTTER+L + FS++GPL V +V D ++ RSRGFAFVY+E+ DA AKE E+DGRRIRVDFSITKRPHTPTPG+YMGRPTY G GG G DY G G R D Y RSPSPYYRG Sbjct: 90 GDHRSRSHSHSPMSNRRRHIGNRTNPDPNCCLGVFGLSLYTTERDLREVFSKYGPLADVCIVYDQQSRRSRGFAFVYFENTNDAAEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGG-----------GGPSGRHSRDYDRGYDRGYDRGYDRYDDREYYRSYRRSPSPYYRGA 262
BLAST of transformer-2 protein homolog beta isoform x2 vs. nr
Match: gi|632985290|ref|XP_007909596.1| (PREDICTED: transformer-2 protein homolog beta [Callorhinchus milii]) HSP 1 Score: 190.274 bits (482), Expect = 1.120e-55 Identity = 100/176 (56.82%), Postives = 116/176 (65.91%), Query Frame = 0 Query: 66 RRSHSRSPMSNRRRHVGTREAPTATSCVGVFGLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFSITKRPHTPTPGVYMGRPTYAGESRGGGSRGSRGGGGGGGGGDYGGRGGGGGGGGGGRGGDGYHRSPSPYYRGGG 241 RRSHSRSPMSNRRRH+G R P +C+GVFGLSLYTTER+L + FSR+GPL V VV D ++ RSRGFAFVY+E+V+DAK AKE E+DGRRIRVDFSITKR HTPTPG+YMGRPTY R +R R ++ R RSPSPYY GG Sbjct: 112 RRSHSRSPMSNRRRHIGNRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLAGVNVVYDQQSNRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRAHTPTPGIYMGRPTYNSRRRDTYNRSER-----YDDHEFYNRSNR-------------RRSPSPYYSRGG 269
BLAST of transformer-2 protein homolog beta isoform x2 vs. nr
Match: gi|909579408|ref|XP_013145601.1| (PREDICTED: transformer-2 protein homolog beta-like isoform X3 [Papilio polytes]) HSP 1 Score: 188.734 bits (478), Expect = 2.632e-55 Identity = 86/123 (69.92%), Postives = 102/123 (82.93%), Query Frame = 0 Query: 66 RRSHSRSPMSNRRRHVGTREAPTATSCVGVFGLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFSITKRPHTPTPGVYMGRPTYAG 188 RRSHS SPMS+RRRH+G RE PT + C+GVFGLSLYTTE+++ FS+FGP+EKVQVV+D KTGRSRGF FVY+ES +DAK AK EIDGRRIRVDFSIT+R HTPTPG+YMG+PT + Sbjct: 81 RRSHSHSPMSSRRRHLGDRENPTPSRCLGVFGLSLYTTEQQINHIFSKFGPVEKVQVVIDAKTGRSRGFCFVYFESQDDAKVAKNECTGMEIDGRRIRVDFSITQRAHTPTPGIYMGKPTVSS 203
BLAST of transformer-2 protein homolog beta isoform x2 vs. nr
Match: gi|938072444|gb|KPP70457.1| (transformer-2 proteinbeta-like [Scleropages formosus]) HSP 1 Score: 187.578 bits (475), Expect = 4.906e-55 Identity = 101/183 (55.19%), Postives = 116/183 (63.39%), Query Frame = 0 Query: 65 RRRSHSRSPMSNRRRHVGTREAPTATSCVGVFGLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFSITKRPHTPTPGVYMGRPTYAGESRGGGSRGSRGGGGGGGGGDYGGRGGGGGGGGGGRGGDGYH----------RSPSPYY 237 R RSHSRSPMSNRRRHVG R P C+GVFGLSLYTTER+L + FS++GPL V +V D ++ RSRGFAFVY+E+ ED++ AKE E+DGRRIRVD+SITKRPHTPTPG+YMGRPTY GGG GG G RG D Y RSPSPYY Sbjct: 70 RHRSHSRSPMSNRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPLSSVTIVYDQQSRRSRGFAFVYFENQEDSREAKERANGMELDGRRIRVDYSITKRPHTPTPGIYMGRPTY-------------GGGAGGLSFSSRRSSRDYCDRGYDRGYDRYDDRDCYRSYRRRSPSPYY 239
BLAST of transformer-2 protein homolog beta isoform x2 vs. nr
Match: gi|943975994|ref|XP_014369148.1| (PREDICTED: transformer-2 protein homolog alpha isoform X4 [Papilio machaon]) HSP 1 Score: 187.578 bits (475), Expect = 8.462e-55 Identity = 104/172 (60.47%), Postives = 122/172 (70.93%), Query Frame = 0 Query: 66 RRSHSRSPMSNRRRHVGTREAPTATSCVGVFGLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFSITKRPHTPTPGVYMGRPTYAGESRGGGSRGSRGGGGGGGGGDYGGRGGGGGGGGGGRGGDGY-HRSPSPY 236 RRSHS SPMS+RRRH+G RE PT + C+GVFGLSLYT+E+++ FS+FGP+EKVQVV+D KTGRSRGF FVY+ES +DAK AK EIDGRRIRVDFSIT+R HTPTPG+YMG+PT + SRG R GG GGGGG GY HRSPSP+ Sbjct: 82 RRSHSHSPMSSRRRHLGDRENPTPSRCLGVFGLSLYTSEQQINHIFSKFGPVEKVQVVIDAKTGRSRGFCFVYFESQDDAKVAKNECTGMEIDGRRIRVDFSITQRAHTPTPGIYMGKPTVS--SRGDNGYDRRRDREEYYYRGGGGGGGGGGYRERDYYQRGYRHRSPSPH 251
BLAST of transformer-2 protein homolog beta isoform x2 vs. nr
Match: gi|1250112076|ref|XP_022596804.1| (transformer-2 protein homolog beta isoform X1 [Seriola dumerili] >gi|1317092009|ref|XP_023256992.1| transformer-2 protein homolog beta isoform X1 [Seriola lalandi dorsalis]) HSP 1 Score: 187.578 bits (475), Expect = 8.470e-55 Identity = 86/122 (70.49%), Postives = 99/122 (81.15%), Query Frame = 0 Query: 65 RRRSHSRSPMSNRRRHVGTREAPTATSCVGVFGLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFSITKRPHTPTPGVYMGRPTY 186 RRRSHSRSPMSNRRRH+G R P C+GVFGLSLYTTER+L + FS++GPL V +V D ++ RSRGFAFVY+E+ DAK AKE E+DGRRIRVDFSITKRPHTPTPG+YMGRPTY Sbjct: 92 RRRSHSRSPMSNRRRHIGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTNDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTY 213
BLAST of transformer-2 protein homolog beta isoform x2 vs. nr
Match: gi|1250112078|ref|XP_022596805.1| (transformer-2 protein homolog beta isoform X2 [Seriola dumerili] >gi|1317092011|ref|XP_023256993.1| transformer-2 protein homolog beta isoform X2 [Seriola lalandi dorsalis]) HSP 1 Score: 187.193 bits (474), Expect = 1.188e-54 Identity = 86/122 (70.49%), Postives = 99/122 (81.15%), Query Frame = 0 Query: 65 RRRSHSRSPMSNRRRHVGTREAPTATSCVGVFGLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFSITKRPHTPTPGVYMGRPTY 186 RRRSHSRSPMSNRRRH+G R P C+GVFGLSLYTTER+L + FS++GPL V +V D ++ RSRGFAFVY+E+ DAK AKE E+DGRRIRVDFSITKRPHTPTPG+YMGRPTY Sbjct: 92 RRRSHSRSPMSNRRRHIGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTNDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTY 213
BLAST of transformer-2 protein homolog beta isoform x2 vs. nr
Match: gi|1083274430|ref|XP_018581572.1| (PREDICTED: transformer-2 protein homolog beta-like isoform X1 [Scleropages formosus]) HSP 1 Score: 186.422 bits (472), Expect = 2.337e-54 Identity = 102/185 (55.14%), Postives = 118/185 (63.78%), Query Frame = 0 Query: 65 RRRSHSRSPMSNRRRHVGTREAPTATSCVGVFGLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFSITKRPHTPTPGVYMGRPTYAGESRGGGSRGSRGGGGGGGGGDYGGRGGGGG--GGGGGRGGDGYH----------RSPSPYY 237 R RSHSRSPMSNRRRHVG R P C+GVFGLSLYTTER+L + FS++GPL V +V D ++ RSRGFAFVY+E+ ED++ AKE E+DGRRIRVD+SITKRPHTPTPG+YMGRPTY GGG GG + R G RG D Y RSPSPYY Sbjct: 92 RHRSHSRSPMSNRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPLSSVTIVYDQQSRRSRGFAFVYFENQEDSREAKERANGMELDGRRIRVDYSITKRPHTPTPGIYMGRPTY---------------GGGAGGLSFSPRRSSRDYCDRGYDRGYDRYDDRDCYRSYRRRSPSPYY 261
BLAST of transformer-2 protein homolog beta isoform x2 vs. nr
Match: gi|1338748978|ref|XP_023670538.1| (transformer-2 protein homolog beta-like [Paramormyrops kingsleyae]) HSP 1 Score: 186.808 bits (473), Expect = 2.421e-54 Identity = 89/132 (67.42%), Postives = 104/132 (78.79%), Query Frame = 0 Query: 65 RRRSHSRSPMSNRRRHVGTREAPTATSCVGVFGLSLYTTERELEKEFSRFGPLEKVQVVLDGKTGRSRGFAFVYYESVEDAKAAKEAMCDQEIDGRRIRVDFSITKRPHTPTPGVYMGRPTYAGESRGGGSR 196 R RSHSRSPMSNRRRH+G+R P C+GVFGLSLYTTER+L + FS++GPL V +V D ++ RSRGFAFVY+E+ ED+K AKE E+DGRRIRVDFSITKRPHTPTPG+YMGRPTY G S SR Sbjct: 100 RERSHSRSPMSNRRRHIGSRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPLTDVTIVYDQQSRRSRGFAFVYFENREDSKEAKEQANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGGPSFARRSR 231 The following BLAST results are available for this feature:
BLAST of transformer-2 protein homolog beta isoform x2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 7
BLAST of transformer-2 protein homolog beta isoform x2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of transformer-2 protein homolog beta isoform x2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold920_size81105:53154..63769+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold920_size81105-processed-gene-0.5 ID=snap_masked-scaffold920_size81105-processed-gene-0.5|Name=transformer-2 protein homolog beta isoform x2|organism=Tigriopus kingsejongensis|type=gene|length=10616bp|location=Sequence derived from alignment at scaffold920_size81105:53154..63769+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'transformer-2 protein homolog beta isoform x2' has the following synonyms
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