DNAse, snap_masked-scaffold1147_size59271-processed-gene-0.0 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of DNAse vs. L. salmonis genes
Match: EMLSAG00000010347 (supercontig:LSalAtl2s:LSalAtl2s685:51126:60163:-1 gene:EMLSAG00000010347 transcript:EMLSAT00000010347 description:"maker-LSalAtl2s685-augustus-gene-0.11") HSP 1 Score: 67.781 bits (164), Expect = 5.805e-14 Identity = 33/56 (58.93%), Postives = 43/56 (76.79%), Query Frame = 0 Query: 45 RDGFVMGEGAGIVVLEEYEHAIKRGA-TIYAELDGFGMSSDAHHVTAPLVTGEGIA 99 RDGFV+ EGAG++VLE+ EHA+KR A IY E+ G+G+S DA+HVTA G+G A Sbjct: 233 RDGFVISEGAGVLVLEDLEHALKRNAPKIYCEILGYGLSGDANHVTASREDGKGSA 288
BLAST of DNAse vs. SwissProt
Match: gi|1175659|sp|P44718.1|Y454_HAEIN (RecName: Full=Uncharacterized metal-dependent hydrolase HI_0454) HSP 1 Score: 98.2117 bits (243), Expect = 2.575e-24 Identity = 45/80 (56.25%), Postives = 58/80 (72.50%), Query Frame = 0 Query: 93 VTGEGIATFNSAKEIREVIMHVPEDRFLIETDTPYLAPVPHRGKPNQPAYVIEVAALIAKLKDMDIETVAQQSTDNFKRL 172 ++ GI TF +A+ IREVI +VP +R L+ETD+PYLAPVP+RGK NQPAY EV +A LK + E AQ +T NF+RL Sbjct: 175 ISCSGIVTFKNAEAIREVIRYVPMERLLVETDSPYLAPVPYRGKENQPAYTREVCEYVATLKGVSAEAFAQITTQNFERL 254
BLAST of DNAse vs. SwissProt
Match: gi|84027865|sp|P0AFQ9.1|YCFH_ECO57 (RecName: Full=Uncharacterized metal-dependent hydrolase YcfH >gi|84027866|sp|P0AFQ8.1|YCFH_ECOL6 RecName: Full=Uncharacterized metal-dependent hydrolase YcfH >gi|84027902|sp|P0AFQ7.1|YCFH_ECOLI RecName: Full=Uncharacterized metal-dependent hydrolase YcfH) HSP 1 Score: 95.9005 bits (237), Expect = 2.030e-23 Identity = 44/80 (55.00%), Postives = 60/80 (75.00%), Query Frame = 0 Query: 93 VTGEGIATFNSAKEIREVIMHVPEDRFLIETDTPYLAPVPHRGKPNQPAYVIEVAALIAKLKDMDIETVAQQSTDNFKRL 172 ++ GI TF +A+++R+ +VP DR L+ETD+PYLAPVPHRGK NQPA V +VA +A LK + +E +AQ +TDNF RL Sbjct: 174 ISFSGIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARL 253
BLAST of DNAse vs. SwissProt
Match: gi|46397185|sp|Q89AG7.1|Y325_BUCBP (RecName: Full=Uncharacterized metal-dependent hydrolase bbp_325) HSP 1 Score: 86.6557 bits (213), Expect = 5.769e-20 Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 0 Query: 93 VTGEGIATFNSAKEIREVIMHVPEDRFLIETDTPYLAPVPHRGKPNQPAYVIEVAALIAKLKDMDIETVAQQSTDNFKRL 172 ++ GI TF ++K + E VP DR LIETD+PYL+PVP+RG NQPAY+ + IA+LK+M E A Q+T NF +L Sbjct: 175 ISFSGIVTFKNSKIVHETAKFVPIDRILIETDSPYLSPVPYRGIENQPAYLYDTMLYIAQLKNMSPECFAIQTTKNFLKL 254
BLAST of DNAse vs. SwissProt
Match: gi|586875|sp|P37545.1|YABD_BACSU (RecName: Full=Uncharacterized metal-dependent hydrolase YabD) HSP 1 Score: 83.9593 bits (206), Expect = 5.130e-19 Identity = 40/76 (52.63%), Postives = 53/76 (69.74%), Query Frame = 0 Query: 97 GIATFNSAKEIREVIMHVPEDRFLIETDTPYLAPVPHRGKPNQPAYVIEVAALIAKLKDMDIETVAQQSTDNFKRL 172 G TF +AK+ +EV+ +P DR LIETD P+L P P RGK N+P+YV VA IA+LK+M E +A +T+N KRL Sbjct: 176 GPVTFKNAKKPKEVVKEIPNDRLLIETDCPFLTPHPFRGKRNEPSYVKYVAEQIAELKEMTFEEIASITTENAKRL 251
BLAST of DNAse vs. SwissProt
Match: gi|11387290|sp|P57436.1|Y355_BUCAI (RecName: Full=Uncharacterized metal-dependent hydrolase BU355) HSP 1 Score: 83.9593 bits (206), Expect = 6.222e-19 Identity = 35/80 (43.75%), Postives = 55/80 (68.75%), Query Frame = 0 Query: 93 VTGEGIATFNSAKEIREVIMHVPEDRFLIETDTPYLAPVPHRGKPNQPAYVIEVAALIAKLKDMDIETVAQQSTDNFKRL 172 ++ GI TF ++ E+ + I +P +R LIETD+PYL+P P+RGK NQPAY+ +A ++ LK++DI + +T NF+ L Sbjct: 182 ISCSGIITFKNSLELCKTIRKIPLNRLLIETDSPYLSPAPYRGKGNQPAYLFYIAEYLSILKEIDIHALGHITTSNFRTL 261
BLAST of DNAse vs. SwissProt
Match: gi|25091600|sp|Q8K9J1.1|Y343_BUCAP (RecName: Full=Uncharacterized metal-dependent hydrolase BUsg_343) HSP 1 Score: 82.8037 bits (203), Expect = 1.651e-18 Identity = 33/77 (42.86%), Postives = 57/77 (74.03%), Query Frame = 0 Query: 93 VTGEGIATFNSAKEIREVIMHVPEDRFLIETDTPYLAPVPHRGKPNQPAYVIEVAALIAKLKDMDIETVAQQSTDNF 169 ++ GI TF + E+ + +P ++ LIETD+PYLAP+P+RGK NQPAY++++A IA +K++ ++ +A+ +T+NF Sbjct: 180 ISFSGIITFKKSIELCNTLKKIPLEKLLIETDSPYLAPIPYRGKKNQPAYLLDIAKKIALIKEISLKELAKITTNNF 256
BLAST of DNAse vs. SwissProt
Match: gi|62286891|sp|Q8L3X9.1|KASM_ARATH (RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial; AltName: Full=Beta-ketoacyl-ACP synthase; AltName: Full=mtKAS; Flags: Precursor) HSP 1 Score: 84.7297 bits (208), Expect = 1.702e-18 Identity = 37/53 (69.81%), Postives = 45/53 (84.91%), Query Frame = 0 Query: 45 RDGFVMGEGAGIVVLEEYEHAIKRGATIYAELDGFGMSSDAHHVTAPLVTGEG 97 RDGFV+GEG+G++VLEEYEHA +RGA IYAEL G+GMS DAHH+T P G+G Sbjct: 273 RDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKG 325
BLAST of DNAse vs. SwissProt
Match: gi|77416725|sp|P0AAI7.2|FABF_ECO57 (RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase II; AltName: Full=Beta-ketoacyl-ACP synthase II; Short=KAS II >gi|77416726|sp|P0AAI6.2|FABF_ECOL6 RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase II; AltName: Full=Beta-ketoacyl-ACP synthase II; Short=KAS II >gi|77416727|sp|P0AAI5.2|FABF_ECOLI RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase II; AltName: Full=Beta-ketoacyl-ACP synthase II; Short=KAS II >gi|77416728|sp|P0AAI8.2|FABF_SHIFL RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase II; AltName: Full=Beta-ketoacyl-ACP synthase II; Short=KAS II) HSP 1 Score: 83.1889 bits (204), Expect = 5.549e-18 Identity = 37/47 (78.72%), Postives = 44/47 (93.62%), Query Frame = 0 Query: 45 RDGFVMGEGAGIVVLEEYEHAIKRGATIYAELDGFGMSSDAHHVTAP 91 RDGFV+G+GAG++VLEEYEHA KRGA IYAEL GFGMSSDA+H+T+P Sbjct: 227 RDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSP 273
BLAST of DNAse vs. SwissProt
Match: gi|1706755|sp|P55338.2|FABF_VIBHA (RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; AltName: Full=3-oxoacyl-[acyl-carrier-protein] synthase II; AltName: Full=Beta-ketoacyl-ACP synthase II; Short=KAS II) HSP 1 Score: 82.8037 bits (203), Expect = 5.879e-18 Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 0 Query: 44 GRDGFVMGEGAGIVVLEEYEHAIKRGATIYAELDGFGMSSDAHHVTAPLVTGEGIA 99 GRDGFV+G+GAG++VLEEYEHA RGA IYAEL GFGMS DA+H+T+P G G A Sbjct: 226 GRDGFVLGDGAGVMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGA 281
BLAST of DNAse vs. SwissProt
Match: gi|2501548|sp|P73335.1|DTD3_SYNY3 (RecName: Full=D-aminoacyl-tRNA deacylase; AltName: Full=D-tyrosyl-tRNA deacylase) HSP 1 Score: 81.2629 bits (199), Expect = 5.956e-18 Identity = 39/80 (48.75%), Postives = 53/80 (66.25%), Query Frame = 0 Query: 93 VTGEGIATFNSAKEIREVIMHVPEDRFLIETDTPYLAPVPHRGKPNQPAYVIEVAALIAKLKDMDIETVAQQSTDNFKRL 172 ++ G TF A+ I+ VP DR L+ETD P+LAPVP RGK N+PA+V VA IA L+ + +ET+AQQ+T N + L Sbjct: 175 ISFSGTVTFKKAEGIQASAQMVPPDRLLVETDCPFLAPVPQRGKRNEPAFVRHVAEAIAALRHVPLETLAQQTTTNARNL 254
BLAST of DNAse vs. nr
Match: gi|1247393748|gb|PCI53481.1| (metal-dependent hydrolase [Gammaproteobacteria bacterium] >gi|1270391487|gb|PHR85650.1| metal-dependent hydrolase [Colwellia sp.]) HSP 1 Score: 112.079 bits (279), Expect = 3.734e-27 Identity = 51/80 (63.75%), Postives = 61/80 (76.25%), Query Frame = 0 Query: 93 VTGEGIATFNSAKEIREVIMHVPEDRFLIETDTPYLAPVPHRGKPNQPAYVIEVAALIAKLKDMDIETVAQQSTDNFKRL 172 ++ GI TF SA +REV VP+DRFLIETD PYLAPVPHRGK NQPAYV+EVA +A L+ ++T+AQ STDNF RL Sbjct: 173 ISFSGIVTFKSANALREVAKLVPDDRFLIETDAPYLAPVPHRGKENQPAYVVEVAKHLASLRGQSVDTIAQLSTDNFNRL 252
BLAST of DNAse vs. nr
Match: gi|1170276370|ref|WP_080532714.1| (YchF/TatD family DNA exonuclease [Vibrio vulnificus] >gi|1169218237|gb|OQK43507.1| Mg-dependent DNase [Vibrio vulnificus]) HSP 1 Score: 111.694 bits (278), Expect = 4.290e-27 Identity = 59/132 (44.70%), Postives = 80/132 (60.61%), Query Frame = 0 Query: 41 RQAGRDGFVMGEGAGIVVLEEYEHAIKRGATIYAELDGFGMSSDAHHVTAPLVTGEGIATFNSAKEIREVIMHVPEDRFLIETDTPYLAPVPHRGKPNQPAYVIEVAALIAKLKDMDIETVAQQSTDNFKRL 172 RQA D + G A K G I+ + F + +A ++ GI TF A E++EV+ H+P +R LIETD+PYLAPVPHRGK NQPAYVIEVAA IA+LK++ + +V +++T NFK L Sbjct: 131 RQAREDTLAILRNGG---------ADKCGGVIHCFTEDFAFA-EAAMALGFYISISGIVTFRQATELKEVVKHIPLERLLIETDSPYLAPVPHRGKENQPAYVIEVAAYIAQLKNISLASVGEKTTQNFKNL 252
BLAST of DNAse vs. nr
Match: gi|653848357|ref|WP_027697113.1| (YchF/TatD family DNA exonuclease [Vibrio litoralis]) HSP 1 Score: 110.153 bits (274), Expect = 1.792e-26 Identity = 48/80 (60.00%), Postives = 63/80 (78.75%), Query Frame = 0 Query: 93 VTGEGIATFNSAKEIREVIMHVPEDRFLIETDTPYLAPVPHRGKPNQPAYVIEVAALIAKLKDMDIETVAQQSTDNFKRL 172 ++ GI TF A E+++V+ +P DR L+ETD+PYLAPVPHRGK NQPAYV EVAA +A+L+ D++TVAQ +TDNF RL Sbjct: 173 ISLSGIITFKQATELQDVVKQLPLDRLLVETDSPYLAPVPHRGKENQPAYVSEVAAFLAELQQCDVDTVAQVTTDNFNRL 252
BLAST of DNAse vs. nr
Match: gi|1084287935|ref|WP_070376507.1| (YchF/TatD family DNA exonuclease [Colwellia sp. PAMC 20917] >gi|1082262559|gb|AOW78477.1| DNAse [Colwellia sp. PAMC 20917]) HSP 1 Score: 110.153 bits (274), Expect = 1.972e-26 Identity = 49/80 (61.25%), Postives = 62/80 (77.50%), Query Frame = 0 Query: 93 VTGEGIATFNSAKEIREVIMHVPEDRFLIETDTPYLAPVPHRGKPNQPAYVIEVAALIAKLKDMDIETVAQQSTDNFKRL 172 ++ GI TF +A E+REV VP+DRFLIETD PYLAPVPHRGK NQPAYV++VA +A ++ +ET+A+ ST NFKRL Sbjct: 173 ISFSGIVTFKNASELREVAKLVPDDRFLIETDAPYLAPVPHRGKQNQPAYVVDVAKFLASVRGQSVETIAELSTANFKRL 252
BLAST of DNAse vs. nr
Match: gi|1273730235|gb|PIE23778.1| (hydrolase TatD [Neptuniibacter caesariensis]) HSP 1 Score: 110.153 bits (274), Expect = 2.017e-26 Identity = 50/80 (62.50%), Postives = 63/80 (78.75%), Query Frame = 0 Query: 93 VTGEGIATFNSAKEIREVIMHVPEDRFLIETDTPYLAPVPHRGKPNQPAYVIEVAALIAKLKDMDIETVAQQSTDNFKRL 172 ++ GI TF +A+E+R+V+ VP DR LIETD+PYLAPVPHRGK N+P YV+EVA IA LK IE+VAQ ++DNFKRL Sbjct: 174 ISFSGIITFRNAQELRDVVKKVPLDRILIETDSPYLAPVPHRGKKNEPKYVVEVAQCIADLKGESIESVAQVTSDNFKRL 253
BLAST of DNAse vs. nr
Match: gi|1326129967|ref|WP_101958459.1| (YchF/TatD family DNA exonuclease [Vibrio vulnificus] >gi|1321000372|gb|AUL95218.1| Putative deoxyribonuclease YcfH [Vibrio vulnificus] >gi|1331311635|gb|PNG78495.1| DNAse [Vibrio vulnificus] >gi|1336020510|gb|POB83754.1| metal-dependent hydrolase [Vibrio vulnificus] >gi|1336039797|gb|POC02098.1| metal-dependent hydrolase [Vibrio vulnificus] >gi|1336070155|gb|POC30710.1| metal-dependent hydrolase [Vibrio vulnificus] >gi|1336100404|gb|POC59507.1| metal-dependent hydrolase [Vibrio vulnificus] >gi|1336113032|gb|POC71358.1| metal-dependent hydrolase [Vibrio vulnificus]) HSP 1 Score: 109.768 bits (273), Expect = 2.519e-26 Identity = 48/80 (60.00%), Postives = 64/80 (80.00%), Query Frame = 0 Query: 93 VTGEGIATFNSAKEIREVIMHVPEDRFLIETDTPYLAPVPHRGKPNQPAYVIEVAALIAKLKDMDIETVAQQSTDNFKRL 172 ++ GI TF A E++EV+ H+P +R LIETD+PYLAPVPHRGK NQPAYVIEVAA IA+LK++ + +V +++T NFK L Sbjct: 173 ISISGIVTFRQATELKEVVKHIPLERLLIETDSPYLAPVPHRGKENQPAYVIEVAAYIAQLKNISLASVGEKTTQNFKNL 252
BLAST of DNAse vs. nr
Match: gi|782751911|ref|WP_045629107.1| (YchF/TatD family DNA exonuclease [Vibrio vulnificus] >gi|1336087101|gb|POC46966.1| metal-dependent hydrolase [Vibrio vulnificus]) HSP 1 Score: 109.768 bits (273), Expect = 2.519e-26 Identity = 48/80 (60.00%), Postives = 64/80 (80.00%), Query Frame = 0 Query: 93 VTGEGIATFNSAKEIREVIMHVPEDRFLIETDTPYLAPVPHRGKPNQPAYVIEVAALIAKLKDMDIETVAQQSTDNFKRL 172 ++ GI TF A E++EV+ H+P +R LIETD+PYLAPVPHRGK NQPAYVIEVAA IA+LK++ + +V +++T NFK L Sbjct: 173 ISISGIVTFRQATELKEVVKHIPLERLLIETDSPYLAPVPHRGKENQPAYVIEVAAYIAQLKNISLASVGEKTTQNFKNL 252
BLAST of DNAse vs. nr
Match: gi|746517149|ref|WP_039553286.1| (YchF/TatD family DNA exonuclease [Vibrio vulnificus] >gi|675335775|gb|AIL70289.1| Mg-dependent DNase [Vibrio vulnificus] >gi|991843510|gb|AMG11787.1| YchF/TatD family DNA exonuclease [Vibrio vulnificus]) HSP 1 Score: 109.768 bits (273), Expect = 2.519e-26 Identity = 48/80 (60.00%), Postives = 64/80 (80.00%), Query Frame = 0 Query: 93 VTGEGIATFNSAKEIREVIMHVPEDRFLIETDTPYLAPVPHRGKPNQPAYVIEVAALIAKLKDMDIETVAQQSTDNFKRL 172 ++ GI TF A E++EV+ H+P +R LIETD+PYLAPVPHRGK NQPAYVIEVAA IA+LK++ + +V +++T NFK L Sbjct: 173 ISISGIVTFRQATELKEVVKHIPLERLLIETDSPYLAPVPHRGKENQPAYVIEVAAYIAQLKNISLASVGEKTTQNFKNL 252
BLAST of DNAse vs. nr
Match: gi|742508518|ref|WP_038963446.1| (YchF/TatD family DNA exonuclease [Vibrio vulnificus] >gi|1336109172|gb|POC67787.1| metal-dependent hydrolase [Vibrio vulnificus Env1]) HSP 1 Score: 109.768 bits (273), Expect = 2.546e-26 Identity = 48/80 (60.00%), Postives = 64/80 (80.00%), Query Frame = 0 Query: 93 VTGEGIATFNSAKEIREVIMHVPEDRFLIETDTPYLAPVPHRGKPNQPAYVIEVAALIAKLKDMDIETVAQQSTDNFKRL 172 ++ GI TF A E++EV+ H+P +R LIETD+PYLAPVPHRGK NQPAYVIEVAA IA+LK++ + +V +++T NFK L Sbjct: 173 ISISGIVTFRQATELKEVVKHIPLERLLIETDSPYLAPVPHRGKENQPAYVIEVAAYIAQLKNISLASVGEKTTQNFKNL 252
BLAST of DNAse vs. nr
Match: gi|746406105|ref|WP_039447716.1| (YchF/TatD family DNA exonuclease [Vibrio vulnificus] >gi|695267795|gb|KGK71668.1| DNAse [Vibrio vulnificus] >gi|1169227519|gb|OQK52534.1| Mg-dependent DNase [Vibrio vulnificus] >gi|1169234019|gb|OQK58778.1| Mg-dependent DNase [Vibrio vulnificus] >gi|1194848775|gb|OUD79653.1| Mg-dependent DNase [Vibrio vulnificus] >gi|1214592767|gb|ASJ38979.1| DNAse [Vibrio vulnificus] >gi|1331299901|gb|PNG67090.1| DNAse [Vibrio vulnificus] >gi|1331306485|gb|PNG73454.1| DNAse [Vibrio vulnificus] >gi|1336013474|gb|POB77196.1| metal-dependent hydrolase [Vibrio vulnificus] >gi|1336014017|gb|POB77696.1| metal-dependent hydrolase [Vibrio vulnificus] >gi|1336031181|gb|POB93871.1| metal-dependent hydrolase [Vibrio vulnificus] >gi|1336066579|gb|POC27301.1| metal-dependent hydrolase [Vibrio vulnificus] >gi|1336070858|gb|POC31377.1| metal-dependent hydrolase [Vibrio vulnificus] >gi|1336076479|gb|POC36796.1| metal-dependent hydrolase [Vibrio vulnificus]) HSP 1 Score: 109.768 bits (273), Expect = 2.657e-26 Identity = 48/80 (60.00%), Postives = 64/80 (80.00%), Query Frame = 0 Query: 93 VTGEGIATFNSAKEIREVIMHVPEDRFLIETDTPYLAPVPHRGKPNQPAYVIEVAALIAKLKDMDIETVAQQSTDNFKRL 172 ++ GI TF A E++EV+ H+P +R LIETD+PYLAPVPHRGK NQPAYVIEVAA IA+LK++ + +V +++T NFK L Sbjct: 173 ISISGIVTFRQATELKEVVKHIPLERLLIETDSPYLAPVPHRGKENQPAYVIEVAAYIAQLKNISLASVGEKTTQNFKNL 252 The following BLAST results are available for this feature:
BLAST of DNAse vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of DNAse vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of DNAse vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1147_size59271:39031..46871+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold1147_size59271-processed-gene-0.0 ID=snap_masked-scaffold1147_size59271-processed-gene-0.0|Name=DNAse|organism=Tigriopus kingsejongensis|type=gene|length=7841bp|location=Sequence derived from alignment at scaffold1147_size59271:39031..46871+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'DNAse' has the following synonyms
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