EMLSAT00000000012, EMLSAT00000000012-695859 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000012
Unique NameEMLSAT00000000012-695859
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1003supercontigLSalAtl2s1003:7903..10754 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000012 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000012EMLSAG00000000012-682778Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000049EMLSAE00000000049-708977Lepeophtheirus salmonisexon
EMLSAE00000000050EMLSAE00000000050-708978Lepeophtheirus salmonisexon
EMLSAE00000000051EMLSAE00000000051-708979Lepeophtheirus salmonisexon
EMLSAE00000000052EMLSAE00000000052-708980Lepeophtheirus salmonisexon
EMLSAE00000000053EMLSAE00000000053-708981Lepeophtheirus salmonisexon
EMLSAE00000000054EMLSAE00000000054-708982Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768846auto768846Lepeophtheirus salmonispolypeptide
EMLSAP00000000012EMLSAP00000000012Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000012

>EMLSAP00000000012 ID=EMLSAP00000000012|Name=EMLSAP00000000012|organism=Lepeophtheirus salmonis|type=polypeptide|length=540bp
MLKSQRKRKEKAXLENVPPLDGDSPAGAKIVVVESDSSIPYHVLLHQTDI
GNNSNKFYLLQIWNVDQGNEFYVWRRWGRVGYNGQTQLMPFGSSRSEAVA
TFKQKYYDKTHNEWGVSKFVKYPRKYNLIQTQIQDKNIKSDGPPMKKQKK
LLALEHPKSDLHPSILQLIEMISDLNSMAQDLSSSLKFDANRAPLGKLTD
SQIKAGYRALKKVAECISSGLNALRASNEYYTKIPHEFGMRVPPIIKSIE
QLQNEIRLLETLGHVRQSYKIFKEMSESHPLEAKYKALGITLNPLDPEKD
DEFSIVEQYIQSTHASTHNQYSMDVEQIFCVEKELKGRHKFKDVGNRQLL
FHGSRLSNWGGILGQGLKIAPPEAPSTGYMFGKGVYFADISSKSANYCFA
TPSKNSGLLLLCEVALGECHELVEADEHANKLPKGKHSVKGLGKVTPNHE
TTLSNGTKVPLGPTEDTGVNNKNGHGDRWKKEDAESLRIASTLKAFEELG
VVPMTQSTSVILSFPLLLELYYWRYFRTAIQLIEILRNNN
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mRNA from alignment at LSalAtl2s1003:7903..10754+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000012-695859 ID=EMLSAT00000000012-695859|Name=EMLSAT00000000012|organism=Lepeophtheirus salmonis|type=mRNA|length=2852bp|location=Sequence derived from alignment at LSalAtl2s1003:7903..10754+ (Lepeophtheirus salmonis)
ATGCTGAAAAGTCAAAGGAAACGAAAGGAGAAGGCAAGKCTTGAGAACGT GCCTCCTCTAGACGGGGATTCACCTGCGGGAGCAAAAATTGTGGTAGTCG AGTCCGATTCATCTATTCCTTATCACGTACTTCTTCATCAGACTGATATT GGGAATAATTCCAATAAATTTTACTTACTTCAAATTTGGAATGTGGATCA AGGAAATGAATTTTACGTTTGGCGGCGTTGGGGCCGTGTTGGTTACAATG GACAAACCCAATTAATGCCGTTTGGAAGTTCTAGATCTGAAGCCGTTGCT ACCTTTAAGCAAAAGTATTACGACAAAACCCACAATGAGTGGGGAGTCTC CAAATTTGTTAAGTATCCTCGAAAGTATAATCTCATTCAAACTCAAATTC AAGATAAAAATATAAAATCCGATGGTCCTCCCATGAAAAAGCAGAAAAAG CTTCTTGCACTTGAACATCCAAAGTCGGATCTTCACCCTTCTATACTCCA ATTGATTGAAATGATATCAGATTTAAATTCCATGGCTCAAGATTTGTCAT CATCTTTAAAATTTGATGCAAATAGAGCTCCTTTAGGAAAACTTACGGAT TCACAAATAAAAGCAGGTTATAGAGCCTTGAAAAAAGTAGCTGAGTGCAT CTCTAGTGGCCTCAATGCACTACGTGCCTCAAATGAGTACTATACAAAAA TACCTCATGAATTCGGCATGAGAGTACCACCCATTATTAAATCCATCGAA CAGCTTCAAAATGAGATCCGTTTATTGGAAACTTTAGGACATGTGAGGCA GTCTTATAAAATATTTAAAGAAATGAGTGAGTCTCACCCCTTGGAAGCCA AATACAAAGCCCTTGGTATTACTCTTAATCCTCTAGACCCAGAGAAGGAT GATGAATTTTCTATCGTTGAGCAGTACATTCAATCTACTCATGCATCTAC GCACAATCAATACTCCATGGATGTTGAACAAATTTTTTGTGTTGAGAAAG AATTGAAAGGAAGACACAAGTTCAAGGATGTTGGTAATCGACAGTTACTA TTTCATGGTTCTAGACTATCAAATTGGGGTGGTATTTTAGGACAAGGACT AAAAATTGCTCCTCCTGAAGCACCTTCTACTGGATATATGTTTGGAAAGG GTGTGTATTTTGCAGATATATCAAGTAAATCAGCCAACTATTGTTTTGCT ACGCCAAGCAAGAACTCTGGTCTATTACTTCTTTGCGAAGTTGCATTAGG AGAATGTCACGAGCTTGTAGAAGCAGATGAACATGCAAATAAATTACCAA AGGGAAAACATAGTGTCAAGGGCCTGGGTAAAGTTACACCCAATCATGAA ACAACTTTATCTAATGGTACAAAAGTTCCTTTAGGACCCACTGAGGACAC TGGAGTGAATAATAAAAATGGGTATACACTACAGTACAATGAATATGTCG TTTATGACGTTCATCAAATTCGAATGAAATTTTTAGCTCAGATCAAATTT AATTTCTAATCTTAAGATTAAAAACGTATATATGTATGTATTTTCGAATT GAGAACTGGTATTCTATATTTTAGGTTCTTAGGTATTAATATTATATCAA AATATATATATATTGTATGTTTGTTGTGTACAAGTTGCAACTCGTATAAG TTCCGATTTTTTACAACAAAAAAATTATTTCAAATGCACTAATACGAAGA TATAGAAAATATATTATTAAAACTTAACATAATTAGCGTGGTATCTCAAA TTGCTGTTTCAACTAATCAGAATTTAATCATTTATATCCAGACATGGAGA TCGATGGAAAAAAGAAGGTATTCATATATACGAATATTAGTTATTAAAAC TTTGAAATTCTTCTTTCTATTTCTTGATTCTTAGATGCTGAAAGTCTTAG GTAAGAAGTAAACCTGTTGCGTTTTCTGCAAAGTTTCCCAAAATATTGAG CTCTCTTTCTACGACCTTTTCTATATGTATTGGAATCGGAACTTGGTGGC GTCTAGCGACGTAAATTATTTCTTCAATTTGCTTAGAATCGCTTCTACTT TGAAAGCATTTGAAGAACTAGGAGTGGTTCCTATGACCCAGTCAACTTCT GTAATCCTAAGCTTTCCTCTACTTTTAGAGTTGTACTACTGGCGTTACTT TAGGACAGCAATACAGTAAGTGTGCCTAAAGGTGGGTTAACACTAAGACG TAAGAAGAGGTGTTGTCTTACTCAGGATCTATTAAAAAATCATAGTCACC TCCAAGGAAGTCTTATTTTCTTTGTCACGTCTATATTATTTTATTATTTA ATTTTTCCAAGGTTAATAGAAATACTTAGAAATAATGTATTTCTATTAAC CTTGGATTTTTCCCTTTTTTGAATATCCAACCAAAMAGGAGAGGAGTTAT CAATTATAAATTTATGATATATTAATTGTTATTATAATAATAAATGAATA TATTATTGCCGTAGGCGAGAACTTGAACTCAAGATTTGCGACTCAAGTTG GGCTTGAGTCCATGTTTGAAGACAATCTCACAGTCAAAGACTCGAGACTT GACTTGGACTCCATAGCCAAGTCTTGTATATTACAGACTCAGAAAAATCC TAAATATATATATAGTTTAAATATAGAACAATAATACTAATATAATATAA AAGCAGCTCAACATACTCTAATTAATGCTCTAGTTCGAAGTGATCCCATT AAGATCCCAATCTGAATTTTGGATATGTTCGAAAACATATACTGAGATAT TTTCTAAAAAACAAAATTGTTTTGTTGCTTGGCAAAGGCACCATTTTGAA GGCCTTACCAGAGCCCCAAACTTTTTATTTTTTATTAAAATAAAAGAATT AG
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