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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1006 | supercontig | LSalAtl2s1006:100895..107314 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000027 >EMLSAP00000000027 ID=EMLSAP00000000027|Name=EMLSAP00000000027|organism=Lepeophtheirus salmonis|type=polypeptide|length=384bp
MPRSGGSSSKSTFHGMDNTFMSRNKSSNTDNQYYQDVVKKVERQRCIQEF
ENGNEKRMLNRKTHGRNEESHTKSAEFKIQLKNHVSQTTDLESEKEATAQ
RLLAEEKVIQDDDTLTDMKHKSRILAQNSLAEHHERKFQEDIERNEESQE
DAIEASKVTAHENFVDEEMQRNGILKAQGYQNRNKEMMSHVNPTEKCKIS
EGYDNNTSSKYKEEEQTFLRERKKNENERILGYRDXLAAIEKRRQLESGX
LADLLHGQSSNSNPSNVKRKDHSSSSAQMNELLRNQIHERRQQVKEIKMK
RQEEEEARLETEALYKASELAQKERRVKEQNTYREFLQMQMEEKRNISSK
REAEDRDFYKLNEREEADNERDERGRVSEMLQAH back to topmRNA from alignment at LSalAtl2s1006:100895..107314+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000027-695874 ID=EMLSAT00000000027-695874|Name=EMLSAT00000000027|organism=Lepeophtheirus salmonis|type=mRNA|length=6420bp|location=Sequence derived from alignment at LSalAtl2s1006:100895..107314+ (Lepeophtheirus salmonis)
TTTGCTCACTACTCCGTCAGTAGTGATTGTATAACTCTTTAAGACAGAAT
GCCAAGATCAGGAGGAAGTTCATCCAAGTCCACGTAATCCCTCAATATGA
ATCAATCTTTTACATTTCATCATTATTTTACTCAATAATTGTTACAATAG
GTTTCATGGAATGGACAATACATTCATGTCCAGGAATAAGTCCAGTAATA
CTGATAATCAATACTACCAGGATGTTGTTAAGAAAGTGGAGCGGCAGCGC
TGTATACAAGAATTTGAGAATGGGAATGAAAAAAGGATGCTAAACCGCAA
AACACATGGAAGGAATGAGGAGTCACATACAAAGTCAGCGTGAGTCATTT
ATATACATTGTTTAGGCTTTTAAAAGTCGTTTTCTTATCACATCCTGTCC
GAGGAATTGTTAAAAATGTGGTCCATATATGCTATACAGGGTGTCCACGA
TAAATGGGAACTATCTTAAAATTCACCTGCATGATAAAAATGGAATTAGG
AGTGTTATTTGTTAATATGAAAAAGTTACACATGATATTAAAATCTAAAT
TTATTCAACATGYCCYCCCTCAGCAGCCACGTTCTTCTCCATCCTGCCCC
TAAAGGATTTGCATGCCCTGATGACTTCCGCAGAATCGACAGCATTCCAC
TCCTTCATAATGGAGCCCTTCAGGGCCGCGATGCTCTTGTGGCTGACCTG
GCMCACCTCCCTCTCCAACATCCCCTACCAGTAGTAATAACACGGATTGA
GGTGCCGTGAGTTGGAGGGCCAGGTGTTGCGATCCCAGAAAGGTATGTCG
TGGGAGTTGAAGAGGTTAGTGGCCCTCATGGCGATGTGTGCGAGCACTAA
GTCTTGTTGGAATATGAMCTCTCYCCTAGCTGCCGTATCCTTCATCCAGA
GGATGACGAACTCCTCCATGACTTCGCAGTACCTTATCGCGTTAACCCTT
TCCTTGGGATTGAAGAAGAAAGGAGGCATCACCTCACCGGTGCAGCAGAT
GACACCCAGGGTCATCACGGAGGCCGGGAACTTTGTGGTGAAGACTCCAG
GGACCTCTTCTCTCTGCTAGGCAAGCCACCTGTCATTCTGGACGTTGTAG
CTTCTGTCGAAGCGGAGAAGAAGATAATTCTTCCTCCATGGCTCTTCAGG
TCATTGAGAAGACACTTTTGGTGAGCCTGGTGGCCTTCATGGATGCCGTG
AGGATGTGTTGTTTGGTCATTCGGTATGACCTGTATCTGAGGTCCTCCTT
CACAGCCTTGGAGATCAACTGCTTACTCACTTAATGGTTCTGGGCCAACC
TGGACAAGGAAGTCCCCGGCAAAGCCTTGATGGACTTCCGCAGGCCTTCA
AGGAAGCGGGGAGTGCGGATTCAGTCGCTTCTCATGTTGTGGGCCTTGCG
GCAGAACTTCACCTCAACCTCCCAGGCATTGAAGGCCCGGTACACCGTCT
TGGTCTTGTGGTAGTTAAGAAGCCTGTAGATAGCAGRGGGCTTGTGTCCC
GCGSGAGCCAATTCGAGGATGGCGTCCCTCCTTGTTTGTTCCATGATGAC
TATTGTTTGTTGTCAAAACAATTGTGGTGAAGTCATAGTGTATTGTTCAA
GCAACCTTTTATATTAGTATGATTTAACCCCGAATATCCACATTATGGAT
CGGGATGAAGTTTAAAGTAGTTCCACTTTATCGTGGACACCCGTATGCGT
AAAAACAATTTTGAACAAAAATCAGGAAATTAAGAAAATCACAATTTGTT
TCTGTGCTTGCCCAATATTTCATAGACATATTTGAGTCAATTATAGGCTT
TTTATTCAAATTACTGGGATGGCTTATGATAACCAAGAACTTTTATTTAA
AAATAACATATTTCGGGTTAAGTTGACCCTTTTCAAATAAGATTCATTAT
CCATTCTTTTATTATGACCATCAATTTTCGCTATCTAAGTGCTATTTACT
ACGACTCCAAAGGGTTATGAATATGAATAATTTGTTCATACAATTAAACG
ATAATTCCTGAAGGAATACAAATGTAATCCACGCTCCACTTTGATAAAAA
ATAATCTAGCTTGCTTTTTTGTTAAATGACCACATATACCAATTCATGAA
ACAAATAACGGAATCTCGATATACAAAAAAAAAAATAATAATAATACATT
TACAATCTTGGGTTGACTCGGACGATGATGATTTTTACAATCTGCTTAAA
CTGTGAGTCCATTTTGAATTACAAAAGAAAAACCAAACGAAGTCGGTTTG
GTTGCAATCACTAAACCTCATCAAGTTTTTTGTTTCTTAAAAAAATTCGA
ACAAATCAAATCCCAATCTCTGAAGTGACAGAAAGATATAGATTAGATTA
TTGTTTCGAATTTTGATTACAACTAGTTTGGAAAAGTTGTCTTGTGGTAA
GAAAATAAACTAAGCAAAATTTTTGGGGCATACCTATTTACTTAGTAAAG
AGTTTTTGACTTATCCGAAAATTTGATTGAGATGTACAACTTAAATGTAA
ATATTGTACCCTAAACTACATATATTTTTTATTATATCATAGATATTATT
CAGGGAGTTCAAAGTATACTAGCCGTCCACCCACAGGAGTAGATTTGGCC
CTGGGCCTGAATGGTTTTAAGGATCTTACTCCCCTTCCTAGAGCACGTGT
TCCATCATCTCTTCAGAATGATAGGCTTGAAAAGTATGACTTTATAAAAA
GCTATCGAGACAGAACGGGKAAGTAGTCCTCATTATATATACTCGAATGA
AAGTTGACTATTTATCATTATCAATCTAAGATGAATCTGAGAAGTGGAGC
AACTTCAAATCTGAAGTAGAGGAAAGGAAGACACGAGAGGAAATGGAAAA
AAAGAAAACTTTGGAAGAATCTCGATATCAACAATTGGAGAATGACAGTA
TATTATTACGGGAGGAAAGGACAAAGGAATTGGAGAAGAAACTACCAAAT
GATTGGGACTATCAAGTACTTTTAACTTTTAATATATTTATATTACAAAT
GACTAGTGATGAAAATCGTGTTTATAATGGGCATGTGAAAAAATGAAACC
GTAAATCAGCACTGTACCCCTCACAATTTGAATAATGTTTTGGAGGAGAT
CAGCTACAATCAGCTGTTAACAAGGGAGTTGGGGGAGAAGGAAATAAACA
AGGTTATTGGCAAGAATGTGTCGAATGTCAATCCTCTATTCCAATTACAG
TCCAACAAGGACTCACAATTATAATTCCCTCAACAAATCCTCGGGGTTAA
TCTCCGTCTTTTATAAACACACACAAATAATCAATCAGGTTTTGAATATA
ATTGAATCTATTTAGGAAAGGATGTTCCACTACGTTCAGGAACTTAATAA
AAATAATGACAACTGCTAGGGAAAAGAAAAGAAAAAACCGGAATGGCTAA
AATATTCAGACAGTTTACATAACCCTCTATGAAAATGTATTCTGCAAGCT
AAGAAGCGCATTTTGGTGCTTTGTTTTAAAGCTTTAGGTAGGAGGGTTTT
TGAAAATGTGGGCTATAGTATTTTCTTTAAAAAAGGTCACTCAGGCAAAT
TACACAGCAGAGCTAAAAAAAAATCATATTTTTAATTTTATTGTGAATGC
TAGGGATTTTTGAAATGTTTCTCAAAACTTTAAAATTTAAAATTTAATTT
TCGAAATTTTTCCAAGAAAGTTTAATATTTAAAATTTAATTTTCGAAAAT
TTCCCGAAAAAGCTTAATAATCTAAAATTTAATTTTCGAAAATTTTCCAA
AAAAGTTTAATATTTAAAATTTAATTTTCGAAATTTTTCCAAAAAAGTTT
AATATTTAAAATTTAATTTTCGAAATTTTTCCAAAAAAGTTTAATATTTA
AAAAAAAAAATTCCAAAAAATTATAATTTTTTGCAAACAACTGTGGATTA
TGATTTTTTTTTTTCAAAAGTATATTTTTTATAAAGTGATACGGATTTTT
CAAAAAAAGTCAAAAACCCAAAATATATACCTCCAGACGCCCTAAATTTA
TGTTGCACGTCCAAGTTATTGATAATAGTTGCTATTTAATCTACGTTAAA
TATCTAATTACAGATCCAACTTAAAAACCACGTGTCCCAAACGACGGATC
TTGAATCTGAGAAAGAAGCAACAGCTCAAAGACTCCTTGCCGAAGAAAAA
GTAATACAAGATGATGATACACTGACAGATATGAAACACAAATCCAGGAT
CCTGGCCCAAAACTCCCTTGCAGAGCATCACGAGAGGAAATTCCAGGAAG
ATATCGAAAGGAATGAAGAATCTCAAGAAGATGCAATTGAGGCCTCTAAA
GTGACTGCTCATGAAAATTTTGTGGATGAAGAGATGCAAAGGAATGGGAT
CTTAAAGGCTCAAGGATACCAAAATAGGAACAAGGAAATGATGAGTCATG
TGAATCCAACGGAAAAATGCAAAATATCTGAGGGGTATGATAATAACACT
TCTTCCAAATATAAAGAAGAGGAGCAGACCTTCTTGAGAGAACGGAAGAA
GAATGAGAATGAAAGGATTCTAGGCTATCGTGACAMCTTGGCTGCCATTG
AGAAACGCCGGCAATTAGAGTCAGGCGKACTAGCGGATTTACTCCACGGA
CAATCGTCAAATAGTAATCCTTCTAATGTTAAAAGAAAGGATCATTCCTC
CTCCTCGGCCCAAATGAATGAACTTTTACGTAATCAAATCCATGAAAGAA
GACAACAAGTCAAGGAAATCAAAATGAAAAGGCAAGAAGAGGAAGAAGCT
CGACTCGAGACTGAAGCTCTTTATAAAGCCTCTGAATTGGCTCAAAAAGA
AAGACGAGTTAAAGAGCAGAATACTTACCGTGAGTTTCTACAGATGCAAA
TGGAAGAAAAGCGAAATATATCATCAAAAAGAGAGGCGGAGGATAGAGAC
TTTTATAAATTAAATGAAAGAGAAGAGGCTGACAATGAGAGGGATGAAAG
AGGAAGGGTATCCGAAATGCTGCAAGCCCATTAAAATGTACTTGGCGATC
CTGGATGGATATGATCATTTTTATTAATATTTATATTTGAGGATCGCCAA
AAAACAAATATGTATTTTGTATATCTCTAGGTAATTCTGTCTCCTACGTT
TTTGCTTATGGTACATTCCCCACTTGGATATCTTTCTGCATATACATATT
CGTCACCTTTTTATATTTTTATGTCATAGTGGACCTGGGCTCTGAGTGTC
TACTTTCTTTCGCGTGATGCACGAATCTTGTGGCCTTTTTAGATCTACTT
TCCCTTTATCCCACCTTCCTCATCCTTCTAGAGTAATCTGTTTCTATTCT
AGGCTTTTGTTTTGTTTCAACAACACAACAGAGGTCATTGTGGATGGAAA
TATCTGATTTACGTTGTACCTCTAGTCTTTACTGTTTAAACAGGCTTTTC
TTTCTATCTATGGAGTTTCTTACATTTCTTCAAGCATTACCTAAGAACAT
GCCTATGACTAAGGAGCAACCTTTTCAATGAGTTCTTTCGGAAAAGATTC
ACCATTCCGGATACATGAATCATTTATCCCTAGGTTAATAGATATACAAG
TATATACCATAATACCATTTTCCGAATGATTTTCACTCCCACTAAGCTTT
TTAAGTGTGACATCATAGGTTATAACTGTTACCAAGGGTAGCAGTATATA
ACCTTCCTTGACTGTTACTGGTAGAGTACCACTGTTATACTCTATGATGC
CAAAATCTGTCGGTCTTGCCCAGCAGTCGGTATGGTACATCAAATCGAAA
ATTCCAGCAAGCCCAATTACACGATGGGATACTCTTGCATTTCAATTACC
CTTACTTTGTCCTTATAGACCCTATGTCCCTTTTTCTTCTGATCTACAAA
TGAGATGTAATGGTAAAGTTTGAGCATAGCAGGACTGTTTGATGCAAATG
TATAGCCACTAGAGTGCCCTCTATCTAGTCAAAACTTGAGAGGATTTCAA
ATTGTAACGACAAAGTCGAATTTCTGTCGAATAATTCAAATTAGACCGTG
GCATTGTATTCTTGCTATAGAATCTTTGATTTTTTTGAGAATGGATTTAT
CATGATTCATAATATTATGAGTCATTATTATCCTTTAAATCCTATTGAGT
TTTACTTGAAAACTAGTGCCGTGCATCTGCAGACAAGATGTTCAAAAGCC
CCTATAATATAACATCTTAAAAAGGCAGGGAATATGTCATGCGAAAAAAT
CTCCTCGTGGCTAATAACCAGTGCCAAAAATATTTTCTACCAAATTACCG
TTCACTTTTTTGTAAATAGCTGTGTAACTAATTTATTCCATGGATTCCTC
CAAATGCAATAATCCTGTTCAAAAAGGAAATTAATTCTTAATTAAGTTGT
AATATGCTATATTATGAGCCTTCTATTGTATACACTTTCCTATCAACAAA
AATATCTTTTTTTATCCGAT back to top
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