EMLSAT00000000028, EMLSAT00000000028-695875 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000028
Unique NameEMLSAT00000000028-695875
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1006supercontigLSalAtl2s1006:124606..125615 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000028 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000028EMLSAG00000000028-682794Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000107EMLSAE00000000107-709035Lepeophtheirus salmonisexon
EMLSAE00000000108EMLSAE00000000108-709036Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772742auto772742Lepeophtheirus salmonispolypeptide
EMLSAP00000000028EMLSAP00000000028Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000028

>EMLSAP00000000028 ID=EMLSAP00000000028|Name=EMLSAP00000000028|organism=Lepeophtheirus salmonis|type=polypeptide|length=168bp
MIGSKTLAAGILLLALIQSSYGTSFVTNIFNLPNEVTSWKCFGQTLSENP
KNGEVYTFDYDLCWTGLIIAKLLFLFLYPTFGGQFFASDDEEPVSSETPE
IKRYGHLMGMDFNNPYEYAEDPSTFARRELSLGERLSTAFRSLKSDARNV
VRYERKRXPEDYLFQGGQ
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mRNA from alignment at LSalAtl2s1006:124606..125615+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000028-695875 ID=EMLSAT00000000028-695875|Name=EMLSAT00000000028|organism=Lepeophtheirus salmonis|type=mRNA|length=1010bp|location=Sequence derived from alignment at LSalAtl2s1006:124606..125615+ (Lepeophtheirus salmonis)
CTAGCTATGCGAGAGAAACTCCCTCGTTGCTATAGTCCTCCTTTCAATAG
GTGCTCCTTTACTGCAACTCATAGTATCACCATTGTAACAGCAATGCACC
CCCTTATTATCTTCACTTATGTGAGGAGGACAATTGCATCAGAATGCATA
CCTTAAAATCACGTAAAGCATTAGGTCTGTTTCTTTATTTTCTTTTTCTT
TTTATCCTGACCTACAGAAAAGGAAAAATAAAAAGATTGTCTACATATAG
CAGGTCACCGAATGGTTTTTCAGTTGCATTGGAAGTGGATTTGAGGGAAG
ACGTCTTATACAAGTATTCATTATGATTGGATCTAAAACTCTAGCTGCCG
GGATTTTGCTACTAGCCCTCATTCAGAGCTCCTATGGAACATCCTTTGTC
ACCAATATATTTAATTTGCCGAATGAAGTTACGAGTTGGAAATGCTTTGG
ACAGACATTGAGTGAGAATCCAAAGAATGGTGAGGTGTACACATTTGACT
ATGATCTCTGTTGGACGGGACTCATCATTGCCAAATTATTGTTTCTCTTC
TTGTATCCTACTTTTGGGGGTCAATGTAAGACAAATCATGTATAAAATGT
CGTTGATATTGATTGATTTTTTTGCATTTTCAGTCTTTGCCTCTGATGAT
GAGGAACCTGTCTCTTCAGAAACCCCTGAAATCAAACGCTACGGTCACCT
GATGGGAATGGATTTTAATAACCCATATGAATATGCGGAAGATCCTTCCA
CTTTTGCTCGAAGAGAGCTGTCTCTTGGAGAAAGATTGTCCACTGCTTTC
AGGAGTCTCAAATCAGATGCTCGCAATGTAGTTCGTTATGAGAGGAAAAG
ATAMCCAGAGGATTATCTTTTTCAAGGGGGGCAATAAATAAAGTCTCCTA
GATTTGTTTTAGTGTTGATTTTAGGAAATTTCTTATTGATTATTTTTTTT
TTATCATCTGTCGTTAAATGTCTTTTTGAAATACACGTTAGGTTACAATT
TAAAAGCATT
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