EMLSAT00000000036, EMLSAT00000000036-695883 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000036
Unique NameEMLSAT00000000036-695883
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1006supercontigLSalAtl2s1006:32711..34092 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000036 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000036EMLSAG00000000036-682802Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000145EMLSAE00000000145-709073Lepeophtheirus salmonisexon
EMLSAE00000000146EMLSAE00000000146-709074Lepeophtheirus salmonisexon
EMLSAE00000000147EMLSAE00000000147-709075Lepeophtheirus salmonisexon
EMLSAE00000000148EMLSAE00000000148-709076Lepeophtheirus salmonisexon
EMLSAE00000000149EMLSAE00000000149-709077Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769977auto769977Lepeophtheirus salmonispolypeptide
EMLSAP00000000036EMLSAP00000000036Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000036

>EMLSAP00000000036 ID=EMLSAP00000000036|Name=EMLSAP00000000036|organism=Lepeophtheirus salmonis|type=polypeptide|length=340bp
MNSDTFVIDNGGYFLKAGFSNQSPPRLVPNCITKAKSEKRKPFIGDQINE
CRDLSSLYYCLPFQKGYLTNWDTQKKIWDYLFSESCCNVDTRDTNLIFME
PLFNFNSVQEGINEIITNTDPAHACLVLDIGYSFTHIVPYIHGLRIKEAT
LRIDVGGKLLTNHLKEIVSYRQLHVLDETYVMNACKEDCCFVSLDFHADM
NETLKHKGNSITRDYILPDFHNLRRGVMKSLEKSTGRPKDENEQFVRMNN
ERFTVPEILFNPSDVGGSTKFSNMRERVEKEIREWIPDLIDVQVIHPQNP
ITYSWEGGAAFSEDPCFLKTCVSRKEFLERGHSVCDERFY
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mRNA from alignment at LSalAtl2s1006:32711..34092-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000036-695883 ID=EMLSAT00000000036-695883|Name=EMLSAT00000000036|organism=Lepeophtheirus salmonis|type=mRNA|length=1382bp|location=Sequence derived from alignment at LSalAtl2s1006:32711..34092- (Lepeophtheirus salmonis)
ATGAATTCCGATACCTTTGTCATTGATAATGGAGGKTATTTTCTTAAAGC
TGGCTTTTCGAATCAAAGTCCTCCTCGATTGGTTCCTAATTGTATAACAA
AGGCAAAGAGTGAGAAAAGGAAGCCTTTTATTGGCGATCAAATAAATGTA
GTACAGAGATAATCATTATTAATTAGAGACACAATTAATCATTGATCATC
CCTAACTTTAGGAATGTCGAGACTTGTCATCTCTTTATTATTGCCTTCCA
TTTCAAAAAGGATATTTAACCAACTGGGATACACAGAAAAAAATATGGGA
TTATTTATTCAGCGAATCATGTTGTAATGTGGATACTCGTGATACAAACC
TCATCTTCATGGAGCCCCTCTTCAACTTTAACTCTGTTCAAGAAGGAATC
AATGAAATGTTATTTGAAGACTATGGCTTYAAGAGAGKATTTAGAGCTCC
TGTTCCAGATTTTKCTTGTTATAAACATAGAATTACGAACACGGATCCTG
CTCATGCCTGTTTAGTACTTGATATTGGCTATAGTTTTACTCATATAGTT
CCCTATATTCATGGTCTTCGAATTAAGGAGGCCACTCTTCGTATAGATGT
CGGAGGGAAACTTTTGACCAACCATCTGAAAGAAATCGTGTCTTATAGAC
AGCTTCATGTTTTAGATGAAACATATGTAATGAATGCTTGTAAAGAGGAC
TGTTGCTTTGTGTCATTAGATTTCCATGCTGACATGAATGAAACCCTCAA
GCACAAAGGGAATAGCATTACTAGGGATTATATTCTACCAGATTTTCATA
ACTTGAGGCGTGGTGTAATGAAATCATTAGAAAAATCAACGGGCCGACCC
AAGGATGAGAATGAACAATTTGTGCGTATGAATAATGAAAGATTCACTGT
ACCTGAAATATTATTCAACCCTTCGGATGTTGGTATCAATCAAATGGGAA
TTGGAGAAGGGGNTGGCACACTGTGTCAATATGATCCCTGAAAACGTAAG
ACCATGGCTTTTAAGGAATATTATCCTTATAGGAGGTAGTACTAAATTTT
CCAATATGAGAGAACGGGTGGAGAAAGAAATCAGAGAATGGATTCCTGAC
TTAATTGATGTAAGTTAATTAATTAATATAAAAAAACCTGTATTGATTTT
TATCGCATATATATTTATTTATTATAACAAAATAACAATATGATTAATAG
GTATATATATTTTTTATCAATGTACTTTATAGGTTCAGGTTATTCATCCT
CAAAATCCAATTACTTACTCTTGGGAAGGAGGTGCAGCTTTTTCAGAGGA
TCCTTGTTTTTTAAAAACCTGTGTGTCTAGAAAAGAATTCCTTGAAAGAG
GTCATAGTGTATGTGATGAACGTTTTTATTAA
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