EMLSAT00000000049, EMLSAT00000000049-695896 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000049
Unique NameEMLSAT00000000049-695896
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1009supercontigLSalAtl2s1009:50171..50533 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000049 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000049EMLSAG00000000049-682815Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000201EMLSAE00000000201-709129Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770662auto770662Lepeophtheirus salmonispolypeptide
EMLSAP00000000049EMLSAP00000000049Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000049

>EMLSAP00000000049 ID=EMLSAP00000000049|Name=EMLSAP00000000049|organism=Lepeophtheirus salmonis|type=polypeptide|length=120bp
MDLVFAAEQYAQAQAXAVAAAXYYANAAAXSGNPSISLASGTLIGSTQPN
QIAFLXPQPIEQQQQQQHEQTVEHPSSRKEDSSSSSSSKSSRRFLTFKTN
ESSHAFNSYLDNNPLTWDSL
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mRNA from alignment at LSalAtl2s1009:50171..50533+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000049-695896 ID=EMLSAT00000000049-695896|Name=EMLSAT00000000049|organism=Lepeophtheirus salmonis|type=mRNA|length=363bp|location=Sequence derived from alignment at LSalAtl2s1009:50171..50533+ (Lepeophtheirus salmonis)
ATGGACTTGGTTTTTGCTGCGGAACAGTATGCTCAAGCACAGGCGSCTGC
CGTGGCTGCAGCYCMATATTACGCGAATGCTGCAGCAAWGTCTGGAAATC
CAAGCATATCTCTTGCATCTGGGACTTTAATTGGATCTACTCAACCCAAT
CAGATTGCCTTCCTAYCCCCTCAGCCCATAGAACAACAACAACAGCAGCA
ACATGAACAAACTGTTGAGCATCCATCTTCGAGGAAGGAAGACTCCTCTT
CGAGTTCGTCGTCCAAGTCATCCAGAAGGTTTCTCACTTTTAAAACTAAC
GAGTCAAGTCATGCCTTCAACTCTTATCTTGATAATAACCCTCTCACTTG
GGACTCTTTGTAA
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