EMLSAT00000000060, EMLSAT00000000060-695907 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000060
Unique NameEMLSAT00000000060-695907
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s100supercontigLSalAtl2s100:152706..156735 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000060 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000060EMLSAG00000000060-682826Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000243EMLSAE00000000243-709171Lepeophtheirus salmonisexon
EMLSAE00000000244EMLSAE00000000244-709172Lepeophtheirus salmonisexon
EMLSAE00000000245EMLSAE00000000245-709173Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773403auto773403Lepeophtheirus salmonispolypeptide
EMLSAP00000000060EMLSAP00000000060Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000060

>EMLSAP00000000060 ID=EMLSAP00000000060|Name=EMLSAP00000000060|organism=Lepeophtheirus salmonis|type=polypeptide|length=608bp
MEKETHHGDSVIRSPPETPPSSSTFPAYLSMYPKGSGFDNIAAPARNTES
EKLRKIRRRKELKEFRKYNKIHEYKTQGDDNSYNFDAVLESLGEQNGTLN
NNNSNNNNNSGNSTSNNGNKDNRKDKRVRRPVTRRRSNNSGVSNNSVKTN
NTNGASSSSEENVLKDFDKDEDEDELEDDKMSSSSLVGGGGGXVRDSEXT
LFSKPSKIERGLSKSSENLSHYSSENLSSFTKVTNKKQKWKKKNAHSVEI
PDNFNINNNNNNNSVTVNIINNNNIINTSSTSMSTSSANIGGKGGNLSSR
YNGYNLRNREIEATRPDLDYNARDFPPLDTPIEDGAGSVVPTNGISPTWS
KPGPSSSVSSSSSSVINERTEEEEPPSAAPQKVSVDLPDVSHCQPPPINS
NAPNNHHLPDLTAQAVEAVTSSSGSITPQETKVELFASTILKSGDIAIAL
TEEEYRSQXPSIPVVIFGRGSSAIRDWTSKSENFEFGFEINETLLAMSSS
DSSHQKQTPVQNRSPPEKENENIPLDRIDRAILSFGDSVTNLTVLGDEXX
ADSSPQLDNSIHLPPYVEEPITFNYNEVINYLENAWLDSLKDTQQQQQKR
HPVASSAY
back to top

mRNA from alignment at LSalAtl2s100:152706..156735+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000060-695907 ID=EMLSAT00000000060-695907|Name=EMLSAT00000000060|organism=Lepeophtheirus salmonis|type=mRNA|length=4030bp|location=Sequence derived from alignment at LSalAtl2s100:152706..156735+ (Lepeophtheirus salmonis)
CTTGCCCCTCTTCTCTCGCTGTCTCGTGCCCTCCCCCACACCCGCACTGA GCCAGTCGCTCTCTCTTTCCTTCTCTCGCGCAACTCCTCAGCAACCACAC ATCCAAGGAAGGAACCAACCACGCAACCAACCAACCAACCAACCTAGTCT CTCCAATCTCTTCCCTCCCCATCCAAGGTAGTATCTCTCTCTATTGACTA TTAGTTCGTGCACCACCATTTTCGATCCCTGAGTCTTGCAGGAGTTTGAA GGTCCTTCCTCCTTAAACATGAGGAGCAGTCACATGTTCAATCTTTTCCA ATATGTCCCAAATTGTAGGTCCAAGTATATTGACTACTAGGGCACATTGA CCTTCTGCATATACATATTGACACCTGTATAAAGCCCTAAATAAAATTAA TTGCATCAGTATATATCAAGACCCTCTTAGAAAAAAGGATAAAAGTGTGT TCCTAGCAGGACTCATGGTTTCAAACAGTTTGGTAAAGTTTCTGAACGAT CAAAAATAACTAGACTGTTTGGGCTGTTACTGAACAAATGGAGTACGATA TTTGTTTTATTATCATAGTTTACTAAATGCTGCATTTAGTTTTCAAAATG TCCTATTTAGACATTTCAAAATTGTTCTGGATAAGTAAAATTGAATTTCT TCATCTCTAAAACTTATTACCATGGTTTTTATCTATTGAATAATGTCCTA TCTGTTACATATTTTATTTACTAGAGATAAGAGTCATTAAAAAAAATAGA TTTTTACATACTGTTCAGAATAAGATGAATGTGAATAATGAACACAGTTA GTGATAAGTCCTTTTTTGAAATTTGACCAGATGGGACATTTTTATCTTAT TGTAAATCATAATATAACGATATGGAATTATAAAGTGAATGAGCTGTGGG TCCTATAAAAACATGAAGTGGGCCACAATGCTTCGGGTTGAACATCCTTG ATCTCGTGTCTTCCGTGAATCAATGTCGTAGGCTCTAAAAAAATTGCATT ATTGATTTAAGTTGCAGATCTCAACCATAGCATGTGTATTGTATTATAGA ATTTCCTGGATATAATGATATTAAATTATTTACACGTCTAGGTACTTCAT GTAATTGATTCATTCCCTTTACTAATTTCAGACGCAATGACTTGAGGATA ATTTTTCGCAAAGGACGACCTCTGTATCAGTAATATTCGCTTTTGGGTAG GAACACTCTAATTTTGTCAAGGATTTATAATGGAAAAGGAAACGCATCAT GGAGATTCTGTCATTCGATCTCCTCCAGAAACTCCTCCTTCATCTTCTAC CTTTCCAGCATATCTAAGCATGTATCCAAAGGGATCTGGATTTGATAATA TTGCTGCTCCTGCAAGGAATACTGAGTCGGAAAAACTACGAAAAATTAGA CGACGCAAGGAATTAAAAGAGTTTAGAAAGTATAATAAAATCCATGAGTA TAAGACTCAAGGAGACGATAATTCTTACAATTTTGACGCTGTCTTGGAGT CGTTAGGGGAACAAAATGGAACCCTTAATAACAATAACAGCAACAATAAT AATAACTCCGGGAATTCAACATCCAACAATGGTAATAAGGACAATAGAAA AGATAAAAGAGTACGTCGTCCTGTAACGAGACGACGTTCCAACAACTCCG GTGTAAGTAATAATAGTGTAAAAACAAATAACACCAATGGGGCCTCATCT AGTTCAGAAGAAAATGTCCTTAAAGACTTTGACAAGGACGAAGATGAAGA CGAATTGGAGGATGATAAAATGTCGTCAAGTTCTCTTGTAGGTGGAGGAG GCGGGAGKGTCCGTGATAGCGAGGRCACTCTTTTTAGTAAACCAAGTAAG ATTGAGCGCGGACTTAGTAAAAGCTCAGAAAATCTCAGTCATTATTCTTC CGAAAACTTGAGTTCTTTCACTAAGGTTACGAATAAAAAACAAAAGTGGA AGAAGAAGAATGCTCACTCTGTTGAAATCCCGGATAATTTTAACATCAAT AATAATAATAATAATAATAGTGTCACAGTTAACATCATCAACAACAACAA CATCATCAATACTTCGTCTACATCTATGTCTACTAGCAGTGCTAACATTG GTGGTAAAGGTGGGAACTTATCAAGTCGCTACAATGGATATAATCTAAGA AATCGTGAGATTGAGGCAACTCGGCCTGACTTAGATTATAACGCAAGGGA CTTTCCTCCGTTGGACACACCAATCGAAGATGGTGCTGGTTCTGTTGTAC CAACAAATGGTATATCCCCAACTTGGTCCAAACCCGGACCCTCGTCATCA GTGTCTTCATCCAGTTCTTCCGTCATTAATGAGCGGACAGAGGAAGAGGA GCCGCCTTCTGCAGCCCCGCAAAAAGTGTCAGTGGACTTGCCAGACGTAT CGCATTGTCAGCCTCCCCCTATCAATTCTAATGCACCCAACAACCACCAT CTTCCTGACTTGACTGCTCAAGCGGTAGAAGCTGTTACATCATCCTCAGG AAGTATTACACCTCAGGAGACGAAGGTTGAATTATTCGCTTCAACAATAC TAAAATCTGGAGACATTGCCATTGCTTTAACTGAGGAAGAGTATAGAAGC CAGGMCCCATCAATCCCAGTCGTTATTTTCGGTCGAGGCTCTTCAGCCAT TCGAGATTGGACTTCCAAGTCCGAAAATTTTGAATTTGGGTTTGAAATTA ATGAGACTCTTTTAGCTATGTCTTCTTCAGACTCCTCGCATCAAAAACAA ACACCTGTTCAGAATCGCAGCCCTCCAGAAAAAGAGAATGAGAACATTCC TCTTGATCGCATTGACAGAGCCATTCTCAGTTTTGGAGACAGTGTTACCA ACCTTACTGTGTTAGGAGATGAGYCCMCCGCCGATTCCTCTCCACAACTG GACAATTCCATCCATCTGCCGCCCTACGTAGAAGAACCTATAACCTTCAA TTATAACGAGGTGATAAACTACCTAGAAAACGCCTGGCTGGACTCACTCA AAGACACACAACAGCAACAACAAAAACGTCATCCAGTCGCTTCTTCCGCT TATTAAAAGTAATAATATACAACTACATGTGAATTGTTAATGCCTGAGTC TATTATATATATTTATATATTTAAATAATAATTTCTTGCGAGCAGAAAAA TTGTAGGAACAAATCAATTATAATTAATTATTATTATTATTATGATCCCA AAATTATCCTTATTTATATTACAGTTCAACTTCCTTTATTATTATTATTT ATTAATTAATTAATTAGCTATAATGATTCAGAAAACAAAAACAAAAACTA CTTTAAAAAAATTTATAAAATATATAATTATAATAATTAAAAAAAAGTAC ATATAAATATATATATATTTACATATATTCACACACACACACACACACAC ATTTTTCCCCCGCATTGTTACCAATACTAAGAAAAATGGTACCAGATAAT AATAATAATAATTAATAATATCATCATTATCTTTCTGTCAGCTGCTTAAT TCTCTCCCTATCCACTTCCCACCCACACCCTTGATTATGTATGAGCTCTT TTTCTCAACCATGTGTTCCTCAACTCGCTTAATATTTGTTCATGAAGGGG AAAACAGTAAAAAGAAAAAAAAAATCCTGTGCTAAAAGTAAATGAAACTT GAAAATTATTATAATAAAATATTCATTTGGCATTTTATTTTTTTAATATC ATAATTAATAGTAATGGTTTCTTGTTAATATATTTATAAATTTTAAGCGT TATAACTTACTAAATCCAACACGTAACCAACCACACTGAGTTAAATCCMC CTTGTATCAACTATATTTTTGATTTTTTTTAAACCCTGCTMCCCCAGCTA GCCAGCCAACCCACCATGTGGTGTTGTTGTTTGCTTGAATTCAAATTTGC TTCAACCATACATATTTTTTTCTTCATTTTTTAGTCAGAATGTTTTCCGC AACTATGTATAGTGGAATAACGTATATTTGATTTGTTGGTGTATTTGGAG GACAATCCGGGTAACTTTGGGGGTGGTTTG
back to top
Add to Basket