EMLSAT00000000076, EMLSAT00000000076-695923 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000076
Unique NameEMLSAT00000000076-695923
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s100supercontigLSalAtl2s100:70986..72381 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000076 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000076EMLSAG00000000076-682842Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000331EMLSAE00000000331-709259Lepeophtheirus salmonisexon
EMLSAE00000000332EMLSAE00000000332-709260Lepeophtheirus salmonisexon
EMLSAE00000000333EMLSAE00000000333-709261Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771348auto771348Lepeophtheirus salmonispolypeptide
EMLSAP00000000076EMLSAP00000000076Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000076

>EMLSAP00000000076 ID=EMLSAP00000000076|Name=EMLSAP00000000076|organism=Lepeophtheirus salmonis|type=polypeptide|length=395bp
MTLCDTFHLRCVSLALSVVNFLIIQRITIQIHGARHGIFGDDKKCLLSSL
NIALFPLLYFFSFFYYTDVGSTFMVLLMYCLHLEKRDWFAAFIGFLAVLF
RQTNIIWVAFVAVQACGPHLIHAIHSLMHMDKKNVKFSLTFTGQLKELIE
GILALLLFYPSTLLKDVVIKCLLTAGGYLIVGLFFIAFIIINKGIVVGDR
LAHTAXFHPTQMFYFFGFSLVMSFPHCISKMESFFKHSVKKKPFWLATLS
LFFYGIIREYGSLAXPYLLADNRHYTFYIWRKIIHRSNWSPYLGIPFYIY
GAYCLSRTLXATGIIFRITFPIFLSFNLCPQLLLEFRYFIIPYLLYRLHI
RPEKYSNLMIEMLLYLLINLGTMYAYMYKPFAWPHEPNSIQRFMW
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mRNA from alignment at LSalAtl2s100:70986..72381-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000076-695923 ID=EMLSAT00000000076-695923|Name=EMLSAT00000000076|organism=Lepeophtheirus salmonis|type=mRNA|length=1396bp|location=Sequence derived from alignment at LSalAtl2s100:70986..72381- (Lepeophtheirus salmonis)
TGGGACCCGAAAATAACAACTTTACCCGGACTCTATTTAATCACCATTGG
GATCCTCAATCCAATTTCAAAGTTTATTGGTCCAATTATGACACTTTGTG
ATACATTTCATCTGAGATGTGTTTCCTTGGCACTTTCTGTCGTCAACTTT
CTTATTATTCAGAGGATCACAATTCAAATCCACGGAGCGAGGCATGGAGT
GAGTCTCCCACGAATATAAAAAATAGATATGTGATTAATTCACTCTCTTC
TTCCTAACAGATTTTTGGAGACGATAAGAAATGTCTCCTCTCTTCTCTGA
ATATAGCTCTTTTTCCTCTGTTATACTTCTTCAGCTTCTTTTATTACACG
GATGTGGGATCCACATTCATGGTTCTCCTCATGTACTGTCTTCATTTGGA
GAAGAGAGACTGGTTTGCTGCATTTATTGGTAAGGGKATCATTATCTTAC
TTCAATGTGAATTGTTTTTCTTAATTCCTCTACTACAGGTTTTCTTGCCG
TTTTATTTCGTCAAACCAACATCATTTGGGTAGCATTCGTTGCCGTCCAG
GCATGTGGTCCACATCTTATCCATGCTATTCACTCTTTGATGCACATGGA
TAAAAAGAATGTAAAGTTTAGTCTTACGTTTACAGGACAGCTCAAAGAGC
TCATTGAAGGTATTTTGGCTCTCCTCCTGTTCTATCCTTCAACACTTTTA
AAGGACGTTGTGATCAAGTGTCTTCTCACAGCTGGGGGATACTTGATTGT
TGGACTCTTTTTTATTGCATTTATAATCATTAATAAAGGGATAGTGGTTG
GAGATCGTCTGGCACATACGGCAGKATTTCATCCAACCCAAATGTTTTAT
TTCTTCGGATTCTCTTTAGTGATGTCATTTCCACATTGCATTTCCAAAAT
GGAGAGCTTCTTTAAGCACTCTGTAAAAAAGAAACCTTTTTGGCTTGCAA
CCCTGTCTCTATTCTTTTATGGAATCATTCGAGAATATGGAAGCTTGGCT
CMTCCCTATTTACTTGCAGATAATCGACACTACACATTCTATATTTGGAG
GAAAATCATTCATCGCTCGAATTGGAGTCCGTATTTAGGAATTCCATTTT
ATATTTATGGAGCATATTGCTTATCAAGAACACTGSGAGCCACTGGTATT
ATCTTCCGCATCACCTTCCCTATATTTTTATCATTCAATCTCTGCCCTCA
GCTCCTTCTTGAATTCCGATATTTCATTATTCCATATCTTTTATACCGTC
TACACATTCGACCTGAGAAATATTCTAATCTCATGATCGAAATGTTATTA
TACTTGCTAATTAATCTCGGAACGATGTATGCATACATGTACAAACCATT
CGCATGGCCTCACGAGCCGAACAGCATACAAAGATTTATGTGGTGA
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