EMLSAT00000000077, EMLSAT00000000077-695924 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000077
Unique NameEMLSAT00000000077-695924
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s100supercontigLSalAtl2s100:73518..75631 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000077 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000077EMLSAG00000000077-682843Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000334EMLSAE00000000334-709262Lepeophtheirus salmonisexon
EMLSAE00000000335EMLSAE00000000335-709263Lepeophtheirus salmonisexon
EMLSAE00000000336EMLSAE00000000336-709264Lepeophtheirus salmonisexon
EMLSAE00000000337EMLSAE00000000337-709265Lepeophtheirus salmonisexon
EMLSAE00000000338EMLSAE00000000338-709266Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771393auto771393Lepeophtheirus salmonispolypeptide
EMLSAP00000000077EMLSAP00000000077Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000077

>EMLSAP00000000077 ID=EMLSAP00000000077|Name=EMLSAP00000000077|organism=Lepeophtheirus salmonis|type=polypeptide|length=526bp
MRPIDDVEESNQEENRKKMRFLRELSERFIDNFRSELASLSRKHICPLPS
TFSAGDIYDNDSSLSSSSSTASAGPKAIFRKFSRGFIRKTRGINFFQKQH
SDEVELSNTSGNLNNHGGSSNSNYEGECQKKRKYKKVRVEMKKSGKINFI
TSEGKDFYNLDTGRPKWERAKLVLYKTSGGYLLEFYSPPKSSIAKMGIFC
LFIQEAXETTDLEMPDHRNTFVVKSANKTEYIVDTSDHEEMHSWLAIIRS
CILGAKVGSDSILLDHSHSTRFGEPQVNPLRSDLDFFHPTSSQRPDLGTF
LMSNNSSNLSLDANAVGDDGNQMDLIPLLMEYPWFHGTLSRNDAASLVLR
GTQTGHGFFLVRQSETRKGELVLTFNFQSRAKHLRLTLNPEGQCRVQHLW
FSSIFDMLEHFRAQSIPLESGAESEVKLTEYVVHSLPNPGAQPRSTNSIS
STMNNGDSLLGVGSGGPQTERGAPPSLPEPFQTITHGGDIRLRTVLLDFY
PHSQGDAQTPSNSSSTRAKENTYSFV
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mRNA from alignment at LSalAtl2s100:73518..75631+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000077-695924 ID=EMLSAT00000000077-695924|Name=EMLSAT00000000077|organism=Lepeophtheirus salmonis|type=mRNA|length=2114bp|location=Sequence derived from alignment at LSalAtl2s100:73518..75631+ (Lepeophtheirus salmonis)
AGAGTAAAGAGATTGCAGAGTACTTTTATAAGGCCGTTTTTGGAGCTAGA AGAGAGGATATGAGGCCCATTGATGATGTGGAAGAGTCGAATCAGGAGGA AAACAGAAAGAAAATGAGATTTCTGAGGTAAACTATTATTTTATGTGACA TAATATTCATTCAATGAATAAATAACACATATCTTAAAATAAAAATTTCA GGGAACTTTCAGAGAGATTCATCGACAACTTTAGATCCGAATTGGCGTCT CTCTCGCGGAAACATATATGTCCTCTTCCATCAACGTTCAGTGCAGGGGA CATTTATGATAATGACTCATCTCTATCCTCTTCTTCTTCAACGGCCTCAG CGGGACCAAAGGCCATTTTTAGAAAGTTTTCTCGTGGATTCATTCGTAAA ACTCGCGGAATAAACTTCTTTCAAAAGCAGCACTCTGACGAGGTGGAGCT CTCCAATACCTCAGGGAATTTGAATAATCATGGGGGATCCTCCAATAGTA ATTATGAGGGCGAGTGTCAAAAAAAAAGAAAGTATAAAAAAGTTCGAGTT GAAATGAAAAAGTCTGGAAAGATTAATTTCATTACTTCCGAAGGAAAGGA CTTTTATAATCTGGATACTGGGAGACCCAAATGGGAAAGAGCCAAGCTAG TCTTATATAAAACATCAGGTGGATATCTTTTAGAGTTTTATTCTCCCCCT AAGGTATGTGTCCCTGATCAGAGTAATTCACCGATAAAGTAATTATCCAA AGTTATCATTGATTTTTTTGTCACTAGAGTTCTATTGCCAAAATGGGGAT TTTTTGTCTATTTATTCAAGAGGCTCSRGAAACTACGGATTTGGAAATGC CGGATCATCGCAATACTTTTGTTGTTAAAAGTGCCAACAAGACGGAATAT ATTGTTGATACATCTGACCATGAAGAAATGCACTCCTGGTTAGCAATTAT CCGAAGCTGTATTTTGGGAGCAAAAGTAGGCTCTGATTCTATTTTATTGG ATCATTCCCATTCGACTCGTTTTGGAGAACCACAAGTTAATCCTCTCCGA TCAGATTTAGATTTTTTTCATCCAACATCTTCACAAAGACCTGATTTAGG AACATTTTTAATGTCAAATAATTCTTCTAATTTGAGTTTGGATGCGAATG CTGTTGGGGGTGAAGTCATTTTTATTTTCAGTTTAGATAAACTTTTTTAT TATATGTGTTTTGTAGATGATGGAAATCAAATGGACTTAATCCCTCTTTT AATGGAATATCCATGGTTCCATGGGACTCTTTCAAGGAATGATGCAGCAA GCCTCGTACTTCGAGGAACACAAACGGGGCACGGTTTCTTTTTGGTGCGA CAGAGCGAGACACGGAAAGGGGAGCTCGTTTTGACATTCAATTTTCAGAG TCGAGCCAAACATCTTAGACTTACACTCAATCCTGAGGGTCAATGTCGAG TTCAACATCTTTGGTTTAGTTCCATATTTGATATGCTCGAACATTTTAGG GCTCAGTCAATTCCCCTTGAATCTGGTGCAGAGTCTGAAGTGAAATTAAC TGAATATGTTGTTCATTCCCTCCCAAATCCAGGGGCTCAGCCTCGAAGCA CAAACTCTATTTCTAGTACAATGAATAATGGAGATTCTCTGTTAGGGGTA GGTAGTGGGGGCCCTCAGACAGAGCGAGGAGCTCCACCTTCACTGCCTGA ACCCTTTCAGGTAAGATAAATTATCAAACAAGCATAATGATAGTAATTCA CTCTATCAATTCTATTGTAATGTTTATTTTCAAGACAATAACGCATGGAG GTGACATTCGACTCAGAACCGTTCTACTCGACTTTTACCCACATTCCCAA GGTGATGCTCAAACGCCCTCAAATTCATCCTCAACTCGGGCAAAGGAAAA TACATACAGCTTTGTGTAGTTCAAGATTTATTTAATGTATGCTCCATACA TACATAGTTATAATTAATTATGATATTATTATTCATCGTTAATAATTATT GTTGATATTTCCAAACAAATCTTCAGACTTTGTTATTAATTGTTATATTT GATTTAATTAATTAATGACTTGTTTTTTCTGCGTGTGTATTTTTTTTTCT CTCTAATGAAATAA
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