EMLSAT00000000079, EMLSAT00000000079-695926 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000079
Unique NameEMLSAT00000000079-695926
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s100supercontigLSalAtl2s100:86413..87877 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000079 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000079EMLSAG00000000079-682845Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000344EMLSAE00000000344-709272Lepeophtheirus salmonisexon
EMLSAE00000000345EMLSAE00000000345-709273Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771771auto771771Lepeophtheirus salmonispolypeptide
EMLSAP00000000079EMLSAP00000000079Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000079

>EMLSAP00000000079 ID=EMLSAP00000000079|Name=EMLSAP00000000079|organism=Lepeophtheirus salmonis|type=polypeptide|length=390bp
MRAQEHDYFKSILSAEXNRDXLSLPNIPQDIFSILLSGMYSGSLALNSGN
AYQVLFYAQLLQMTPAILQCKNFLVNHSFQNIFPWAAAXAAAASTLYPKQ
WIFPLNMFPPTTATSQLSAPTPAPPTIPLPQSLPHQKSLLVTSSPSASQL
QPFPKDPHQPFSLHNDNIDAAAASSSPPFLINSYNESQSEHSIKSEPKTQ
ETHQNKEPEPSCSTSPSNQCLREENHPXLLDLAACDGPVSFQRVPNPHSF
KKQSKNETSTTSPPNEGDSXSDDEAHAQKEGKQKSDQVYQCLFCNHTFKS
QYCYQKHKQRHLNPFSLDFQTGDSIKKKSLILKDINVQFFPCKICGAKFP
SYYFVHKHKKLWHTQEEEEEAENRFRRAKLIKEYDTQSSK
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mRNA from alignment at LSalAtl2s100:86413..87877+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000079-695926 ID=EMLSAT00000000079-695926|Name=EMLSAT00000000079|organism=Lepeophtheirus salmonis|type=mRNA|length=1465bp|location=Sequence derived from alignment at LSalAtl2s100:86413..87877+ (Lepeophtheirus salmonis)
ATGAGAGCCCAAGAGCAGTAAGATTGAAAAAGCGGCAGGMTTAAAAGAAA
MTATCCATATACATATATGATATGTACACCGTAGAGGTATATAAGTTATT
ATTAATCTGAATTTTAATTCATTTTATGATTCAATAATGGATCAGGAACA
TCCTCCTCCTCCTCCAACTCATTGTTGCCGTCAAGAGGAGGAACAGCAAC
AGCAGCAGCAACAAGAGCCTAGTCTGTCTTCTTCTAAATGGTTCGACATC
ATTATTTCCGCTGGAGGAAGGCCCTTTCCAGCAAACAAGACCATTCTCAT
ACAAAATAGTGACTACTTCAAGTCTATTCTAAGTGCAGAARCCAACAGAG
ACTKCCTGTCTCTTCCAAATATACCTCAAGACATATTTAGTATACTCCTA
TCAGGGATGTACTCGGGATCCTTGGCGCTCAACTCTGGAAATGCATATCA
AGTTCTCTTTTACGCTCAGCTCTTGCAAATGACACCGGCCATTCTTCAAT
GCAAAAATTTCCTAGTCAATCATTCTTTTCAAAATATATTCCCTTGGGCT
GCTGCTSCCGCCGCTGCTGCTAGTACACTCTATCCCAAACAATGGATCTT
CCCACTTAATATGTTCCCTCCAACAACAGCAACTTCTCAACTCTCAGCTC
CAACTCCTGCCCCTCCAACCATCCCTCTTCCCCAGTCCCTCCCACATCAA
AAGTCCCTCTTAGTAACCTCCTCACCATCAGCATCTCAGTTGCAACCTTT
TCCCAAGGATCCCCATCAGCCCTTTTCATTGCACAACGACAACATTGATG
CCGCCGCTGCCTCCTCCTCACCTCCTTTTTTGATCAACTCTTACAATGAA
AGTCAAAGCGAGCACTCAATCAAAAGCGAACCCAAGACACAAGAGACTCA
TCAAAACAAAGAGCCAGAACCATCATGCTCCACTTCTCCAAGTAATCAAT
GCCTCAGAGAAGAAAATCATCCTKCCCTKCTCGACCTAGCCGCATGTGAT
GGCCCCGTGTCCTTCCAAAGAGTTCCTAATCCTCACTCCTTCAAAAAACA
AAGCAAGAATGAGACAAGCACCACCTCTCCTCCCAATGAAGGGGATAGTA
SCTCAGACGATGAAGCCCATGCTCAAAAGGAAGGWAAACAGAAAAGCGAT
CAAGTCTATCAGTGCCTATTCTGTAACCATACCTTCAAATCCCAGTACTG
CTATCAAAAACACAAACAAAGGCATCTTAATCCCTTCTCCTTGGACTTTC
AAACGGGAGACTCCATCAAAAAGAAATCTCTTATTCTCAAAGACATTAAC
GTTCAGTTCTTTCCCTGTAAAATATGTGGTGCCAAATTCCCTTCCTACTA
CTTTGTCCATAAGCACAAAAAACTTTGGCATACTCAAGAGGAGGAGGAGG
AAGCTGAGAATCGTTTCAGAAGGGCAAAACTTATCAAAGAGTACGACACT
CAGTCTTCAAAATAA
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