EMLSAT00000000121, EMLSAT00000000121-695968 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000121
Unique NameEMLSAT00000000121-695968
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s101supercontigLSalAtl2s101:520216..522776 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000121 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000121EMLSAG00000000121-682887Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000514EMLSAE00000000514-709442Lepeophtheirus salmonisexon
EMLSAE00000000515EMLSAE00000000515-709443Lepeophtheirus salmonisexon
EMLSAE00000000516EMLSAE00000000516-709444Lepeophtheirus salmonisexon
EMLSAE00000000517EMLSAE00000000517-709445Lepeophtheirus salmonisexon
EMLSAE00000000518EMLSAE00000000518-709446Lepeophtheirus salmonisexon
EMLSAE00000000519EMLSAE00000000519-709447Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778346auto778346Lepeophtheirus salmonispolypeptide
EMLSAP00000000121EMLSAP00000000121Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000121

>EMLSAP00000000121 ID=EMLSAP00000000121|Name=EMLSAP00000000121|organism=Lepeophtheirus salmonis|type=polypeptide|length=555bp
FKKYKSEKAKCVNVITDHRHHQDEFDFESLHSQGLALQVFALHDVEKGDM
RKACLFCHFYIISGKSKGLVRDFIQEFRQEMRLNTGKFTIITSSEDSFSL
LYDSALQHTPNVLIIEIKSGVLGREGKYPVYLPLIEKDPKAYEKDFWNGS
QLAINGFNIFKDVVHDMRGRILNIVAFHFPPYLLFNTFSNGTVYHTGYEY
NLIKLIAKSINFEIGKISLPDDNKFWGSVKFDENGTAIPTGIIGNLYEYK
ADIGIANIYVSLERYEVVAFSVPYRFDYGIFVTRKPDSLPQWQAIIFPFD
KQLWLALVITLIICIIFVNLYAFRHKEVFKRLYDGTFDLIHIVLDQSTSL
TNSYMTQTFKVFLGIYIINMFIITLSYKGSLISVLTVPHVPPPIDTVKDL
LDKSTVPMGGIGLSLINHGRNSPNQNVRKLIGDDYIKFDNAKDAFKXFGE
TQLHILNQKYKGFMSSYGFPMVNLYGREINRRIIQLFEGGIIGKIRRDTM
EKGVRNSLSVETTKSQQPLNINNVQGVFLLWSLIILISIISFIVENVLKN
IFKYK
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mRNA from alignment at LSalAtl2s101:520216..522776+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000121-695968 ID=EMLSAT00000000121-695968|Name=EMLSAT00000000121|organism=Lepeophtheirus salmonis|type=mRNA|length=2561bp|location=Sequence derived from alignment at LSalAtl2s101:520216..522776+ (Lepeophtheirus salmonis)
TTCAAGAAGTACAAATCTGAAAAAGCGAAATGTGTAAATGTCATTACTGA
TCATCGTCATCATCAAGATGAATTTGATTTTGAGTCTCTTCACTCACAAG
GACTAGCCCTACAAGTAAGTGTTTCCACTTTAGTTTTCGTATAGTTAAAG
GGGCGTCCGCAGGGGCTGGGCTACAGGGGCTGCAGCCCTCCCCAAATTAA
GGAAATTTTACTTTATAGTAGAAAATTTAATATTTGATTTTTTTTTCAAA
TTTTTTTATTTTTTGTGAATAACTGTGGATTTTTGAAAAAAATTAAAAAA
AAAATTAATTTTTTGTGAATAGCTGTAGATTTATGAAACTTTTTTCTAAA
AATTTAATATTTGAAATTTTTTTTTGTAAGTAACCGTGGAATTTTTGAAT
TTTTTTTGTCAAAATAAAAATTTGAAATTTTTTTGACAAAAATATTGAAT
TTTTCACAAAAAAACAAAAAATAATTCCAAAAACCAAGCTCCCCCTCGGC
CTCCAAAAACATATATATAATCTTGCAGATGCTCCAGACTTACTTAAATG
CTTTTTTCTTTAGGTCTTTGCTCTCCATGATGTTGAAAAAGGAGATATGA
GGAAAGCTTGCTTGTTTTGTCATTTCTATATCATTTCTGGGAAATCAAAA
GGTCTGGTGAGGGATTTCATTCAAGAATTCCGTCAGGAAATGAGGCTGAA
CACGGGAAAGTTTACAATCATTACTTCATCTGAGGATTCTTTTAGCTTAT
TATATGACTCTGCTTTACAACACACACCTAATGTCCTTATTATTGAAATA
AAGAGTGGAGTCCTTGGGAGGGAAGGTAAATATCCCGTTTATTTGCCATT
GATCGAAAAAGATCCAAAAGCCTACGAGAAGGATTTTTGGAATGGATCAC
AGCTTGCAATAAATGGGTTCAATATTTTCAAGGATGTCGTTCATGACATG
AGGGGACGGATTTTAAACATTGTTGCCTTTCATTTCCCTCCATATCTTCT
TTTTAATACCTTTTCGAATGGAACTGTCTACCATACAGGATATGAAGTAA
GGAGACATCATTTTATAACTATGTAGTTACAAGTTAGCAATATCATTTTG
TTTTTTTCAGTACAATTTAATAAAATTGATAGCAAAGTCTATTAACTTTG
AAATTGGAAAGATCTCCCTTCCTGACGATAATAAATTCTGGGGAAGTGTC
AAGTTTGATGAAAATGGAACCGCAATACCTACTGGGATTATAGGCAATCT
CTATGAATATAAAGCAGATATTGGAATTGCAAATATATACGTTAGTTTGG
AGAGGTATGAAGTGGTCGCTTTCAGTGTTCCCTATCGTTTTGATTACGGG
ATATTTGTTGTGAGTAGTACTTCAAATTAGTATTTTATCAGTTGTATCAT
TATTCACATTTGTTCATCAGACACGAAAGCCTGATTCTTTGCCTCAATGG
CAAGCCATTATATTCCCTTTCGATAAACAACTCTGGTTGGCTCTAGTCAT
TACTCTCATCATTTGTATAATCTTTGTTAATCTCTACGCGTTTCGCCATA
AGGAAGTATTTAAAAGGCTCTACGACGGTACGTTTGATCTAATCCACATC
GTTTTGGATCAATCAACCTCTTTAACCAATTCCTACATGTAAGTTTTGCT
TTATTTTGACTTCTTATCATCTATAATTAATCAATGTGCATCTTTCTTTA
TAACAAAGGACTCAAACGTTTAAAGTATTTCTTGGAATCTACATAATCAA
CATGTTCATAATCACATTGAGCTATAAGGGAAGTTTGATATCCGTTCTGA
CTGTCCCTCATGTTCCTCCTCCCATTGACACAGTGAAGGATCTTTTAGAT
AAAAGTACAGTTCCGATGGGAGGAATCGGACTTTCTCTAATTAACCATGG
ACGGAATAGTCCAAATCAAAACGTTCGAAAATTAATTGGTGACGACTACA
TCAAATTCGACAATGCAAAAGATGCATTCAAAGNGTGCTATGAAGGAAAA
AATGACTTAATTTTCTCCATGCTCAGTGCAAAATTTAATATTTTAACAGA
CTATACTAATGAGTATAGTAACACTGACGTACTTTATTAAATATATGATT
CAATTTGTTTCATTTTAGATTTGGAGAGACTCAACTTCACATTCTGAATC
AAAAGTATAAGGGCTTCATGTCTAGCTATGGATTCCCTATGGTTAATTTA
TATGGACGGGAAATAAATAGAAGGATTATACAGCTCTTTGAGGGTGGGAT
CATTGGTAAAATTCGGAGAGACACAATGGAGAAAGGAGTTAGGAATAGTT
TATCTGTAGAGACAACAAAGAGTCAACAACCATTGAATATTAATAACGTT
CAAGGAGTATTTTTACTTTGGTCCTTAATTATACTCATTTCCATTATTTC
ATTTATTGTGGAAAATGTACTAAAAAATATCTTTAAATATAAATAAATGA
CACTGCATCAATTATTCTGATCATATCAATTTGAATGATTCAATAATAAC
GCACATACATTTATGACCTCCTTAGTTATATACTTTTAAATAACATATGA
ATACGTTGTAC
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