EMLSAT00000000125, EMLSAT00000000125-695972 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000125
Unique NameEMLSAT00000000125-695972
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s101supercontigLSalAtl2s101:617028..620654 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000125 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000125EMLSAG00000000125-682891Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000543EMLSAE00000000543-709471Lepeophtheirus salmonisexon
EMLSAE00000000544EMLSAE00000000544-709472Lepeophtheirus salmonisexon
EMLSAE00000000545EMLSAE00000000545-709473Lepeophtheirus salmonisexon
EMLSAE00000000546EMLSAE00000000546-709474Lepeophtheirus salmonisexon
EMLSAE00000000547EMLSAE00000000547-709475Lepeophtheirus salmonisexon
EMLSAE00000000548EMLSAE00000000548-709476Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778919auto778919Lepeophtheirus salmonispolypeptide
EMLSAP00000000125EMLSAP00000000125Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000125

>EMLSAP00000000125 ID=EMLSAP00000000125|Name=EMLSAP00000000125|organism=Lepeophtheirus salmonis|type=polypeptide|length=476bp
MSRICSYLFISFVLFGNPLVTFPKRDKLIHFTLHVLRSRGLKCHGSFGCF
IGMNIFGIDEFPVSPDEIDLQIKLYTRQNRDKPNIFMYNDISNLNISNFN
ESRNTKMIVHGFGGSCDKPWELNVFCADWSKGAIHPYYSQAAANTQIVGK
MVTFFLELLNEEFGSINERLHLIGFSLGAHICGFVGSELQGLSRITGLDP
AGPIFTKLTASKKLDKSDADFVDIIHSNGKPFTRGGLGDIEASGTLDFYP
NGGQTQLGCPGFIVAQLRFTGKKRKDRTCNHRRAVEIFIESIEESCEMKA
FPCSDWKSFSIGQCFDTKQXLSIGFPSYSWSNQSGNYYFGTRGTKPFCGR
QLRITIDYGTEYGYNSLYKGSVTMIFEDVALNNIDNFKILKHFYAPGRDS
RVITIEKDFPIEDIYLSYNQNGYGFFINVIKXRKYLRINSVEITDDISGS
TSIWALNTTNNVIESGAEEKLFRIPK
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mRNA from alignment at LSalAtl2s101:617028..620654-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000125-695972 ID=EMLSAT00000000125-695972|Name=EMLSAT00000000125|organism=Lepeophtheirus salmonis|type=mRNA|length=3627bp|location=Sequence derived from alignment at LSalAtl2s101:617028..620654- (Lepeophtheirus salmonis)
ATGAGTCGAATATGTTCGTATTTATTTATATCATTCGTACTATTCGGAAA TCCCTTGGTAACATTTCCTAAAAGAGGTAAGTTGTATGCTATAAGTAGAT TGCTTGCAATTTGGTAGTCATCTTTCATTTCAGTCTTTCATCCAACTTAT CTGCAAGACCATGAATTATCAATGTAATTGTCGTATTGATATGGGTATAG AAATAGTTTTTCAGTATAGAATGGGGCTAATAATTTTGATCTTCGTATTT ACATTTGAGATAAATTAATACACTTTACTCTCCATGTTCTCAGATCAAGA GGCCTTAAATGTCATGGCTCCTTTGGATGCTTCATAGGAATGAACATTTT TGGAATTGACGAATTTCCAGTTAGTCCAGATGAAATCGATCTTCAAATAA AGTTATATACTCGTCAAAATCGAGATAAACCCAATATTTTTATGTATAAT GACATTTCTAACCTCAATATCTCAAATTTCAATGAATCAAGAAACACTAA AATGATTGTACATGGATTTGGAGGATCCTGTGATAAACCCTGGGTCCGTT TAATGAAGGATGCATTTTTAAACAAGGTACTTGAAAGATTGAATTCTATA TATAATATACATAATTCCATACCATGGAATACAATCACAAGGGATGGAAC TGCCTACAAATACATTAGTTATCATAACAAACATAGCTACACGTACAAAA TAAATCCTTTTTCTTTTTTAATTTGGATATATTGTAGTCNNNNNNNNNNC CCCCCCCCCTCCACTCAAATTAAAGAAATTTTTACTTTTTAATTAAACAT AATTTTCCAATTATTTTTCCACAAATTTAATTTCTCAAATTTTTTTCCAA GAAATCGACTTATTTGTGAAGCTGTGGATCTTTGAAATTTTTTCAAAATT TTTTTATTTTTTTTGAATAGCTGTGCCTTTTGAAATCAAAAAAAAAATTG AACATTTTAAAATTCGTTTATAAAAAATTAATTTTCCAAATTTTTAATTT TTGAATTGTTTGCAAAAAAAATTATTTAAACCAAAAAAAATTAAATTTTT TCAGAATAGCAATGGATGTTTTTTTTAAAATTTCAAAAAAAAAAAAAAAA TCTTTGTGAATAACTTTTTTTTTTAATTTTTTTTTTTTAAGTAATTTAGT ATGTGAAATTTAATTTTTTGCAAACAGCTCTGATTTTTTTCTGATTACCT TTAAATTATTTAATTTTATTTCCAAAAAAATTAATTTGTGGTGAATAACA GTAGATTTTTAACTTTTTACCAAAAAGTTTAATATTGAAAATTTATTTTT TGGATTTTTAAATTGAACTAAAGACGCAAGGACAGGCGATACGGGCAAAT GGGAAATGGTCCATAGGGCAATGAGGCAATGTTCTACTTTGTCCGTTGCT CCACCAAAAATTTACCAATTATTGCTCTTACTCTTTTAATATACTGNGTA ATGTACCAATCAAATTTGATAAGTAGATAAGTTGTTTCTTATCAAAGTTT TTTGGCTTACAGCTATGCTAAACATGATCCCTCATTTCTGGAAAAAAATG TATCATGAATGCAGAGATCATTTTCCCAGCAATTATGTTTGCTTTGTTAC AAAACTATGAGGAAATCCGCATTCTCCAATCATAATTATGTGTATGAAGT TTTCCATCTCAATAAAGCTTATTATACATATGTAACATTTCGGATGAAGC AAAAAGGCCATTCACCTCTATTACATAATTTAAGGAATTCTGCATTGAAG TTTTCTTGGTATTTGAAGGATTAGACCAAGCAGAATTATATACATTTTTT TTTTTTTTTTTTGAAAACATTAACTTTTCACCAAAAATTAGAAAGTTAAA TTTTTAGAAAAAAATTTCAAAAATGAAATATCATATTATATTAAATTTTT GAAAAAAAAAAAATCAAATATTAAAAATTTTCAAAAATACCAAGCTAATC ACAAAAAAATAAATTTGTTTTTGAATAAAAAAACTCAAAATTAAATTTTG AAAATAAAAAAACTTTGGAATTTTTGAAATTTTTGGGAAAAATAATTTTT AAATTCCCATCTACTCGCAAAAAATTAAATTTTAAATATAAAATATTGTA GAAAAATAATTCAAAAATCAATTTCCGTTACAAGAAATGGAATTCTTAGG AAGAAAATTTCAAAAATCATGTTATAGAAAAGATGAAGGGAAAGTTTTGA CGACTAATGTATAACATGTTGGAAAAAAAATTATTTTCTTCCCATTCTTC TCTTGTTTATTCCATGGTCCATATATAGAATTTAACATATAACTATAATA TCAAAGTAAATTGATCTCTTGATTGAAGGAGCTAAATGTATTTTGCGCCG ACTGGTCCAAGGGAGCAATTCATCCTTACTATTCCCAAGCAGCTGCCAAC ACTCAGATAGTAGGAAAAATGGTAACCTTCTTTTTAGAACTTCTGAATGA GGAATTTGGAAGTATAAATGAAAGACTCCATCTGATAGGATTTAGCCTTG GAGCACACATTTGTGGATTTGTGGGATCCGAGCTTCAGGGTTTAAGTCGG ATAACAGGTCTAGATCCTGCTGGCCCCATATTTACCAAATTAACCGCATC AAAAAAACTAGATAAGTCTGATGCGGATTTTGTTGACATCATTCATAGTA ATGGAAAGCCTTTTACACGTGGAGGTTTGGGGGATATTGAGGCATCAGGC ACCTTGGACTTTTATCCTAATGGAGGTCAGACACAGTTGGGGTGCCCTGG CTTCATAGTGGCCCAGTTGAGTAATATGTTTAAATGTAGGTTGGCATTTG ACTTGATTTCCTAATATTCATTTAAGAACATCACCTTTGAAGGGTTCACG GGGAAGAAAAGGAAGGATAGGACTTGTAACCATCGGCGAGCTGTTGAGAT TTTCATTGAAAGCATTGAAGAAAGCTGTGAAATGAAAGCATTTCCCTGCT CGGATTGGAAAAGTTTCTCGATAGGACAATGCTTTGATACAAAGCAASCA TTGTCTATCGGATTCCCTTCCTATTCATGGTCGAATCAAAGTGGGAATTA TTATTTTGGAACACGAGGTACAAAACCATTCTGTGGTGAGTATTAAATGG AATTCATAGGTATGTAGGAAGTTAGGTACATTCAAGAATGAGTATTTTGT TTCAGGAAGACAATTGAGAATAACAATCGACTATGGCACGGAGTACGGAT ACAACTCATTGTATAAGGGATCTGTCACCATGATATTTGAGGATGTCGCA TTGAATAATATAGATAACTTTAAAATCTTAAAGTAAGTTCATACCGAAAT CAACACTTACATAACGCTTATATTCTTCATTCACGTGCTAACACTCCTGA ATTAATTTCTTATTCTAGACATTTCTACGCGCCAGGAAGAGATTCCCGAG TTATTACTATAGAAAAGGATTTCCCAATAGAAGATATATATTTAAGCTAT AACCAAAATGGCTACGGCTTTTTTATCAACGTTATCAAGAGMCGAAAGTA TCTAAGGATTAATAGTGTTGAAATAACGGATGATATCTCAGGAAGCACGA GTATTTGGGCATTAAATACCACAAATAATGTCATTGAGAGTGGAGCTGAA GAAAAATTATTTAGAATTCCAAAGTAA
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