EMLSAT00000000139, EMLSAT00000000139-695986 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000139
Unique NameEMLSAT00000000139-695986
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1021supercontigLSalAtl2s1021:54890..58082 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000139 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000139EMLSAG00000000139-682905Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000597EMLSAE00000000597-709525Lepeophtheirus salmonisexon
EMLSAE00000000598EMLSAE00000000598-709526Lepeophtheirus salmonisexon
EMLSAE00000000599EMLSAE00000000599-709527Lepeophtheirus salmonisexon
EMLSAE00000000600EMLSAE00000000600-709528Lepeophtheirus salmonisexon
EMLSAE00000000601EMLSAE00000000601-709529Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770828auto770828Lepeophtheirus salmonispolypeptide
EMLSAP00000000139EMLSAP00000000139Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000139

>EMLSAP00000000139 ID=EMLSAP00000000139|Name=EMLSAP00000000139|organism=Lepeophtheirus salmonis|type=polypeptide|length=474bp
MILIFVIWIEDGASFSRTYFLRIKENVNTTIALKLRCANYPYSMGVTALL
VYPLPQDKTASQTIEIIQKRILNLGANHTGQFLVDCETYINTTVPSKVLH
XLHNSXXPATVFSILESPGKHSVSFTSDTLFDLLLLKLSNIYSKKSKIES
KGHRFEIGDFLVKLGVVSSAGSFKGILIEVEYIPCSFISSCWSLMVEFMQ
GFLGSIVPKEIPSCIKNKESPDEIFTPLDTIQLYLEQFGILKKVTTNLAA
GXQMLGPXSSPATSTSSQLSSSSPQCIDPLLLSPTAIFLASKVEEFGVIS
NTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVF
LPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLH
IACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGI
LGKMPKPKIXPPTLPSAPSHNMPH
back to top

mRNA from alignment at LSalAtl2s1021:54890..58082-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000139-695986 ID=EMLSAT00000000139-695986|Name=EMLSAT00000000139|organism=Lepeophtheirus salmonis|type=mRNA|length=3193bp|location=Sequence derived from alignment at LSalAtl2s1021:54890..58082- (Lepeophtheirus salmonis)
ATGATTTTAATTTTTGTTATTTGGTTAATTAAAATTCAAATGAAAAGGAA
TCTACAGTTCCAGTTGTACATATAGGGGAGACGTGCACAAGAATTTATGG
CCATCATCGGTCACAAACTTAATATTGGGAATATAGTAGAGATTAATAGT
CTATTTCTTTATAACAGATCCATTTCATGTACTAATTCTGCATGAGTAAT
CTACAATGGAGAAGAATCAGTATTAACTAAATAACTTCTACTCGTTATGA
TTATGATTTACGACAAAATGAACAAAATGATATCATTTCACTATGTCTAA
TTTACAAATAGTTTTAGTTAAAATATTTTATAAATCTACAACTCTACAGA
AATTTACCTGCAACAATCAACTCTATCCTGGAGAAAGCAAGAAGAATATA
AAAATGTAATTCAAATAAAGTATTAAGCTACACAGTGGTTTTTTTTTATG
ATGTATTGGTTGGCTAATAAGAGAGCAACTAAGAGCTAGATAATTTCAGA
CTCAGACAGTGTGAATCATCGAAACACAAATAGCAATTTAAAAAAATAGT
ATTTGATAAAACTGACCCAGTCTTACCTACTTAGTGATGATACACAATTA
TAAAAGCGGGAATATAATATTTACTGAGAAGTTAGAACTAATTCTCATGA
CGTCATTCCCTTTTAAATATTTCTATGACTTAAAGTAGCCAGCTAGTTTC
GTTACAAACATATGTAATCATTGAGTTACTATTGATTACTAATAATTAAA
TATTATCAGACGCTGAAAACATTTTTTTACTCCCACATTTGTTTCCTTCT
ATATCAGTACAAACTAAAAAAATACCAGAAACGTCAACGTTTACATGTTA
CAAACATAGAAGAGGCACAAAAAATAAAAATTAATTTCATTTTTTTAAAG
TGTAATTACTTTTTAAACTAATGAATTATATGAATTTCCATCCTTTAAAA
AAAGATAAAAGGTTGCGTTAGTATATAAAAAGTAAATAAAACTTTTATCT
AGCTATCAAATAATAAACATAACTTTCAATGAAACTTGTGACGTCATATT
GTGAGGATGCCTATATTTTTTGTCTGTGATAACTTAAAAAAGTGAACACA
ATTAATAAATAATAATTTAAGGTTTATCCAACAATTATATGTTATTTCAA
ATTTGGATACCAACGAAATTATACAGTCAATAAACAACACAGATATTTAC
ATCCCTGGATTCATTTTTTTTTCATTTTTTGTAACGTGCCTAGTTAAAGT
TAATATATAATTATTAATTTCTTATCGGTATTGGCTTYAAACTTTTKTTC
CATTAAGGKATTATAAAATATAACTTAGCTATAAGGCATGTATTAATTTT
CAAGTATATTTAATTTATAAAGGATTGAAGATGGAGCTTCATTTTCCCGT
ACCTATTTTTTGAGAATTAAGGAGAATGTGAATACAAGTAACAATTTTAG
CTGCCAAGGAAACGCTTTCAACACTTTTTAGGGCATTTTAAGAGTTTTGG
AGTCATATTTTGGACATAGCTATAGCCCTGAAACTGAGATGTGCTAATTA
TCCCTATTCCATGGGCGTTACTGCACTCCTCGTATATCCACTTCCACAGG
ATAAAACAGCATCTCAAACCATTGAAATAATTCAGAAACGAATCCTCAAT
TTAGGTGCTAATCATACGGGACAATTTCTTGTGGATTGTGAGACCTACAT
CAATACTACAGTTCCATCAAAGGTTCTTCACKTTCTTCATAATTCAGASC
ASCCTGCCACTGTCTTTTCCATACTCGAATCTCCAGGAAAGCACTCTGTT
TCCTTCACTTCAGACACTCTCTTTGATCTCCTACTTCTCAAACTCTCTAA
TATTTATTCTAAGAAGTCAAAAATTGAATCTAAGGGACATCGCTTTGAAA
TTGGAGATTTTCTTGTCAAATTAGGGGTTGTGTCTTCTGCTGGATCCTTC
AAAGGTATTCTTATTGAGGTGGAATATATCCCTTGTTCCTTTATATCCTC
TTGTTGGAGCTTGATGGTAGAATTTATGCAGGGATTCCTTGGATCTATTG
TACCTAAAGAAATCCCATCCTGCATCAAAAATAAAGAATCCCCTGACGAA
ATTTTTACACCACTAGATACCATTCAATTATATTTGGAACAGTTTGGAAT
ACTGAAAAAAGTAACAACGAATTTGGCTGCTGGGKCCCAGATGTTAGGAC
CCMCTAGTTCACCYGCNACATCTACATCATCCCAGTTATCATCTTCTTCA
CCTCAAGTTCAAGCAACCCAATAATTATAATTTAACATGGCTGGKAATTT
TTGGACTAGTTCTCATCACGCCCAATGGATAMTGAATAAAACGGATTTGC
TTCGTGAGCGCCATGTGGATTTCCAAGTGATCAGTGAAGATGAATATCAA
AAAATAATCATTTTTTTTGCTAGTTTTATTCAAACACTTGGAGAGCAGCT
AAAGCTTAGACAACAAGTTATTGCTACAGCAACAGTATTTTTCAAGCGTT
TTTATTCTCAAAATTCCTTAAAGTGTATAGATCCATTGCTTTTGTCACCG
ACTGCGATATTTCTTGCGAGTAAAGTGGAAGAATTTGGAGTTATCTCCAA
CACCAGACTAATAAATACTTGTACAACTGTAATCAAGAATAAATTTTCTT
ATGCTTATCCCAATCAGGATTTCCCCTACAGGTAAATTTAATGTGTTTTT
TGTTTTTGTATACATAAAATTATTTATGTCTTATAATTCCATTTTTTTAA
GGGCAAACAATATCCTGGAATGTGAGTTTTATTTATTGGAAAACCTGGAT
TGTTGTATGGTTGTATTTTTGCCTTATCGACCCTTGGTCCAATTCTCCCA
GGATTTAAATGTGGAGGAGTCGGTTCTTCCTATAGCCTGGAGGGTTGTCA
ACGACTCACTTCGCACGGATGTTTGTCTTTTATATCCACCTTATTTAATA
GCTCTAGCTTCTTTACATATCGCTTGTGTCATCATGAATAAAGATTGTAC
ACAATGGTTTKCGGRTCTCAATGTTGATTTGGAAAAAGTTCAAGATATTT
CTAAATATATTATTAATTTGTATGAACTCCAAAAAAATTTTGACGAAAAA
AAAGAAATGGGTGGAATTTTAGGGAAAATGCCAAAACCTAAGATTCAMCC
TCCCACTCTCCCTTCCGCACCTTCACATAATATGCCTCACTAA
back to top
Add to Basket