EMLSAT00000000142, EMLSAT00000000142-695989 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000142
Unique NameEMLSAT00000000142-695989
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1021supercontigLSalAtl2s1021:140193..141338 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000142 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000142EMLSAG00000000142-682908Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000629EMLSAE00000000629-709557Lepeophtheirus salmonisexon
EMLSAE00000000630EMLSAE00000000630-709558Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773108auto773108Lepeophtheirus salmonispolypeptide
EMLSAP00000000142EMLSAP00000000142Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000142

>EMLSAP00000000142 ID=EMLSAP00000000142|Name=EMLSAP00000000142|organism=Lepeophtheirus salmonis|type=polypeptide|length=97bp
MATKFCAPGCGTGYDNEPQQSGVKIHLWPNKERNPGLDTAWLRAITRETD
LKKMDQAPSKSTKLRSLHFNDSDFICESKRSQTLGKALKKRCDYFRS
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mRNA from alignment at LSalAtl2s1021:140193..141338-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000142-695989 ID=EMLSAT00000000142-695989|Name=EMLSAT00000000142|organism=Lepeophtheirus salmonis|type=mRNA|length=1146bp|location=Sequence derived from alignment at LSalAtl2s1021:140193..141338- (Lepeophtheirus salmonis)
ATGGCCACTAAGTTTTGTGCTCCAGGGTGTGGAACGGGCTATGACAACGA
GCCACAACAGTCTGGTGTTAAGATCCATCTATGGCCAAACAAAGAGAGAA
ACCCCGGACTTGATACCGCCTGGCTGAGAGCCATTACAAGAGAAACAGAT
CTGAAGAAGATGGATCAGGCACCATCTAAAAGTACAAAGCTGCGTTCCCT
GCATTTCAACGACTCTGATTTCATCTGTGAGTCTAAAAGAAGTCAGACCC
TTGGCAAGGCTCTAAAGAAGAGGTAAGATAGCTGCTCACTTTTGATGCGT
ATGCTTATAACTTTACAGGTACCTCAAACCCGATATAGTATCATCCCTAT
GGCCAAACTGTCCCAACTACCTCTCAACTCCTAAAGCGTCATCAAGGCCA
ACTTAAGCTGCGAACAAGTCACGTAGGGCTCAACAGTTACAATNTGCTCA
CTTTTGATGCGTATGCTTATAACTTTACAGGTACCTCAAACCCGATATAG
TATCATCCCTATGGCCAAACTGTCCCAACTACCTCTCAACTCCTAAAGCG
TCATCAAGGCCAACTTAAGCTGCGAACAAGTCACGTAGGGCTCAACAGTT
CAATAACCTAAACAACACCTGGAATTTGAACTCTTGAATGAGGACTCTGG
AAGAACTTGGTCACAAATTGGCCAAGGAGACACTCCCCTCCTCATCACAA
AACCAAGTGTTGCCCTTTTGAAGCTATCCCATGATGAGAAATTGGGCCCC
CAAGTAGTAGCCAGCATCTAGTTTGAGACAGATATGTCATTCAAAATGAA
TCACTCTGGGTGTTGATTGACAAAAAGGTAGTGTCACACATCMCCTCAGA
AAGCAAAGTCAACACTGTGATTCAAGCCATCAATTTGTCTTCCTTTTTGG
GAGCAAAAGAAGAATTGAATCAAACAGAGACCTGGGAAGACATTCTCAAC
AAGTTAGTGAAGTTTCTCAACTCCTCAGAGATTGAACCTACACAAGTATT
CTGAGTCTTGTCAAATTCTGAGGTAAATAAGATATTTGTTAATTGTAAGC
TTCTTTATTTAGGTATTACTTATTTTTACAATATATTAATATCATTACAA
TATTTTACTTTTTTAAATTTTCAGGTGTGATTACTTCAGAAGTTAA
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