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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1022 | supercontig | LSalAtl2s1022:75384..80937 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000148 >EMLSAP00000000148 ID=EMLSAP00000000148|Name=EMLSAP00000000148|organism=Lepeophtheirus salmonis|type=polypeptide|length=466bp
MKGKKKMTPTALVNKTLDTKSVEFLLGECGRLRADLIALTKNCPPPPPPP
RFPDESSRIHGVVQKRFREFENSTKEEIQRQKKKSLDTRIIRPPHRKPPQ
ETKPNKPMSSPKIRNPSHLSTKLIKGVNIFPSLSVEKLRSFEFIQARPKS
NVGYYHFIHAEDNRERVGERSHHLVVQNTANINISPEKMRENESHDDELS
KNETEQLKEESLKSSSVEWHNSTLRDVEQSDVEEAEGSPQNTLSEDISYT
LDSTKSKALSEYNTSQKSETSSHTLDSIKRSKNLSKFLLHADKSVIERLP
LDEKMKIIRRNLHTYEKSELEAEDDNYSKEGETEEEPNTDSLCEVLRYAL
SMGETRSFLSTIEEQTENEVSFHSLSRRSHEVELSRSESLSGGLVKSLPS
SGLSFSDLRSYKKAVVSDKDLTPTMALSEGQFIQEGSCSKGCEDLETDMD
DVSSSDTFTISVGEWN back to topmRNA from alignment at LSalAtl2s1022:75384..80937+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000148-695995 ID=EMLSAT00000000148-695995|Name=EMLSAT00000000148|organism=Lepeophtheirus salmonis|type=mRNA|length=5554bp|location=Sequence derived from alignment at LSalAtl2s1022:75384..80937+ (Lepeophtheirus salmonis)
CCCCGGCACCACTCCCACCTCCAACGACAGATCCAACAGAGGTAATTGAT
GTAAAAAAGGATTGTAAGGATGATGTTTTGGTTTTAGAGGAGGCCTGCTC
TTCCCATTTACCTTGCCAGTCTCGAACTGCAAATGGAGAATACTCTGAAC
AGAAATCTGGCATGTAATCCCTAACAGTATGGCTTGTATCTTTATAAGCG
AAGCATTCATTMAAGTATTGTAACTCAAATGGACGATAGTGTTCTGTGTA
TAAATCAAAGCGATAATTAAACTCTTCATCATCAACAGCTAAAGCGATAT
CACAGTTTTTCTCAGAATAAAACAAAGGTAATGGAAGATTTTTCTTGAGA
CGCCTATCCCACCATTGAGTGTTATGTCGCAGTAGAAGTCTATTCAAAAT
ATTATAAGTCATATTGTTATTAATTAGATATTTATAAGGGAATAACATTT
ACCCGCTTTTATCAATATCTTGCTTCATGTGAGGCAAATGAAGACATATA
TCAGAGGCGTATTCCTTATCCCAGATATGAGGTCGTCCTGAAACAGGTTT
AAATACACCCAGAAATAAATTGATCATCATTTGTTTATCAGCATCGGATA
GAGTATTGCTATAGTATCTTCGTATTGTTTGTGTAATATCATTGGCTTTG
CTTGACCATTGATTTGTCCTTTTCCGATAGCATTTGACTCTATAATTACA
CATACATAAATACATTATTAACTGTTAAAGAATGAAATAATTAATTATTA
CCTGTGTATCAACTGCGATCCTCCATATTGAATAGCTATAGTATCTCCTA
GACTCTCATACATGGCTTCCAGCATTCTAGCAGCATCTGTTTCAAACTCA
ACTACAGGTTGGTCGATAAACCCCATGGCAAATAGCTTTAATAATATAAG
CAAGTTGATTTCAAATCAATCATAATATGAAAAGAAAATGAGTACCTGAA
ATCCTAAAGCACATTTTCCTACAACAAATTGAGCAGTGTTTGTCCGATCA
AGACAATCAACACAGTTGGTTCGGATTATTCCCGTTTGCTTGGTTCCGTT
TTCTTGATTGTGATGCTAAATACAATAAAGTGGTAAATCCAAGAAGTATT
TTTACTAGGCTCATATTATATTAAATCCTTACTAGATTCATAAAAGTCTC
AAAAAATTTGGAATAACGGTTCTGGTCTTTACTTTTGTACCAGCTATATC
CCTTTCTATTATAGAAAATTCCAGTTTTCGCTAATGCCTGATAAGCGATT
TCGTGCAAATGATGCATCACCAGGTTATTCTCACTTTAAAGAAAGTAAAT
CATTGTGAAAAAATAATTTGAGTCCAAACTTTAATGTAAAATACTATATA
GTATTACCTTTTTCGACATTTCGCCATATCAAAATGAACATACTGAATTC
GATTGGCCGGAGGCAAAAATTGATTTAAATAAGATATACTTTTAGTCAAT
TCGTCGGTCAGAATGCTCTCGTGTTTACGTCTCTTGGATTTATTTTCTTT
CTTAACTAAATTAACACAGACAATAGGAGATCCAAATCTTTGTAACATAT
CGTCAAAGTGTCTTCCAGCGGATATAGCAAAAGGATCATTCAATTCTACA
TAAATAGGGGGCTTGGGTACCATTTTACTAATGTCTTGTGTCCAGTGACT
TGGAACTGACCCTCTACACTGAACGAATGAAGTCMTTTCGTATCCATAAG
AACCCCCACTTGTAAGAATTTGCTCTGTTTCTACTTCATTCGCAACGTTC
CCGTCAAAATCTAAGCCACGTTTAAGGAATCGCGTCCCAGCATATTTATG
AGATCTTCGAGCGATCAATGTCAAGAGAATGGATATCCCATAATTACAGA
TATTACCATGATCTACAAATCCATGAATGATATTTKGGACCCAATCTTCA
TGGATTACCTCTTTAACAGGACTTGTTAGATATGAATTCCAGAGAAATCT
TTCATTAGGAGTGGATATATATCCTAAAGTGGATGGAACATGATCAGATG
GAAAAAAATCTTTGATTGAGATTCGTCCATTCTCTATTTAAAAAAAGAAG
AAAAAAACAAGGAAAGTTTGTAAGAAAAATAAGATACTCCATCAAGGTAA
ATTACTCGTCATAACATGAGTTGGAATTTCCACATTATATTGAAATGTAT
GGGTTAGATCATAACTGTAGCTATAATAAAAATTAGCAGAGAGATCCACA
GCTTGAAACATTTTAAGATATCGCGCTTCCTCCGCACCATTTTCACGGAT
ATCAATGAGTGGAAGGMAAATCATTTGCGTTTCTTCTACTTTATAAATAG
AGTGATAGCCAATGGATGCCACTTTTCTCCTTGCTTTAATGAGGATCATG
TAGTATCCCTCCAAAAATCGAACAAACCCAATAATTCCATATGCAGAAGC
TACTTTTTGAAGACCAGATCGTATTTTTTGCCCTCTAACCTTGGATTTAT
TACCATCTTCCATCATACGGACCAAATCATTAATTTCTTTTGGGTCATAG
ACCCGTCCATCATCAGTGATTTGAAGACTGTACGGCTCAGTACGATTGAT
TTTGAGGACTCTAAAGTGAGTTTGACGATCATTGGAGCCCAATACAAAAA
ACCTCTTATGAAAGAATAAAAAAAAAGATTGAAAATACTTTTTTTCAAAA
AGGGTCATTAATAATTAGAGACATAAGTCATTACCTCTCGAGTCTCATAG
ACGATAATCCTTTGTATACATCGACTCAACTCTTTGAAATGCATGATGAT
GATCCGATCAATAAATATTAATACATAATAAATAATAATAAACTAAAAAG
AGGAGTTTTGACGTTTGTCACTTGTTTCAGTTTTGATGTGAATGCATGGA
CATTGTGCGACGTTGTCACTGAGTCACTCATTTCACATGTGTTCTAGCTA
GCCTTAGGAGTAACCGGAGTAGCTTGGTCAGATCAGACTCAGTGCAGTTA
CCTTAGTAATTTGGCGGAAGAGAATATGAAATAATAAATAATAGAGCCTA
GAGATGGGAAAAAAAAGGAAGTGAAGAGAAAAAATGGCAAAATAAATAAC
TGTCAGTRGAGAACATTTCCACCCCATTTCATTCCTGGATTNCCATCCCC
TTCAATCATCATCGTAATGTAAATCAAGAGTGAACCCAAAATTTAATCCA
TTCCAATACACTTCAAACATCCTCCCACAATCCATAACCTCTCGGAATTC
CAATAAATATGAAAGGAAAAAAGAAAATGACGCCAACGGCCTTGGTGAAT
AAAACCTTAGATACTAAATCCGTGGAATTCCTTCTGGGCGAGTGTGGAAG
ACTTCGTGCGGATCTCATTGCTCTCACTAAGAATTGCCCACCACCACCTC
CTCCTCCACGGTTCCCTGATGAAAGCTCAAGGATCCACGGTGTTGTTCAA
AAACGATTTCGTGAGTTTGAAAATTCCACAAAGGAAGAAATACAGCGTCA
AAAGAAAAAATCGCTAGATACTCGTATAATACGTCCACCCCATAGGTGAG
TGGGATTGATGATCTAGTCTTTCATAAAATATATATATTATCTAATTCCT
TCTTAAAATTACTAGAAAACCTCCCCAAGAAACGAAACCTAATAAGCCAA
TGTCCAGTCCCAAAATAAGAAATCCTAGTCATTTAAGTACAAAGCTCATC
AAAGGAGTTAATATCTTTCCAAGCTTATCCGTTGAGAAATTACGCTCTTT
CGAATTCATACAAGCTAGACCCAAATCCAATGTGGGGTACTATCATTTCA
TACATGCGGAAGATAATAGAGAGAGGGTGGGGGAAAGATCTCATCATCTC
GTTGTTCAGAATACCGCGAACATCAATATATCTCCAGAGAAAATGAGGGA
GAATGAAAGTAAAGAGTCGAAAAGTATTAAATATACCCGTGTCTGTAATT
ATTGTTATTTTTCTATTAGGTCATGATGATGAGCTATCGAAAAATGAAAC
TGAGCAACTAAAAGAAGAAAGTCTGAAATCCTCATCTGTAGAATGGCATA
ACTCTACTTTAAGAGATGTGGAGCAATCTGATGTAGAAGAAGCTGAGGGA
AGTCCTCAGAATACTCTATCAGAGGATATTTCATATACTTTGGACTCCAC
GAAGAGCAAAGCCTTGTCAGAATACAATACCTCCCAAAAAAGTGAAACCT
CATCACATACACTGGATTCCATAAAAAGGAGTAAAAACTTGAGTAAATTT
CTTTTACATGCCGATAAATCTGTGATTGAGAGGCTTCCTCTGGATGAAAA
AATGAAAATAATTCGACGTAATCTACATACATATGAAAAATCAGAATTGG
AGGCGGAGGATGACAACTATTCTAAAGAGGGTGAAACGGAAGAGGAGCCC
AACACGGACTCTTTATGTGAAGTACTACGCTACGCTCTATCAATGGGGGA
AACCCGCTCCTTTTTATCCACGATTGAGGAACAGACAGAAAATGAAGTTT
CTTTTCATAGTTTGTCCCGTCGATCACATGAGGTGGAACTGAGTAGGAGT
GAGAGCTTAAGTGGTGGTCTCGTCAAATCCTTACCTTCCTCTGGCTTATC
TTTTTCGGATCTAAGATCTTACAAAAAAGCTGTCGTAAGTGATAAAGACT
TGACACCAACAATGGCATTATCTGAAGGGCAATTTATTCAGGAAGGATCA
TGTAGTAAAGGATGTGAGGATCTAGAGACAGACATGGACGATGTGTCCTC
GAGCGATACTTTTACAATCAGTGTTGGAGAGTGGAATTAAATTATTCTAT
AACATGGACATGGATTTATTCACGATTTAAAGTCTTTAAAAAATAATAAT
AGTGTACAAAAAGTCTAGTAAATGTTTTTCAGAAACGTAATTAGCATTTA
TTTTGCGGCAACTTAATTTTGGAAGCTTCTTGCACAATGTTAAACGATTC
AAGAATGTCTCCTATTAATTCTTTTTTCTCCAATATTCTTGTTTGTTGTC
CTTTGGAAAGAACTCCAACGGAACCGTCCGTATGGTTCCAATCTGGGAGA
TCTATAATTGGATTTCCGCTTTCCTGAGGGTTTCTAGAGTATTGAAGCAC
CATTTCTCGATAGTCTCCTCCCATCTTTTTACGCATTGTGTGTTTACGAA
TCCATTTCTCTTTTCGGACTTCATTCTTCTTGTCATGACCCTCTTCATTG
CCGTATAGCCTTTGTTTATAAGATATAGATCGAACAGAGAGGTGGATAAT
AGGTTGACAGAGCTGCCTTTGGATTCTTGAAGCCGAAGGTAACCACATGA
TGGTGTTTATATAATTGTCTCAATACTTGGGAATGATATTAGAATGCGAG
CGAACTCAATTATTGTTATGCATTACGTCAGAGATATCTATTTTAACAAT
ATTATTGCGTTATAGGTGCAACAAGACGAACGGCTCACAACCAATTTTAC
TCACAGAATACATTTATGCCTGGACGTCTACAGTTTCAAATGGAAGATGT
ACCATTCATAATAAATTAAAAATCAAGATTATGATTACTGATTGAAATGG
ATATTTTTGTATAAGCTTCCTTACTCCTAGTTTGGACAAAGCTTTATATT
GAAA back to top
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