EMLSAT00000000154, EMLSAT00000000154-696001 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000154
Unique NameEMLSAT00000000154-696001
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s10242supercontigLSalAtl2s10242:220..1360 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000154 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000154EMLSAG00000000154-682920Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000731EMLSAE00000000731-709659Lepeophtheirus salmonisexon
EMLSAE00000000732EMLSAE00000000732-709660Lepeophtheirus salmonisexon
EMLSAE00000000733EMLSAE00000000733-709661Lepeophtheirus salmonisexon
EMLSAE00000000734EMLSAE00000000734-709662Lepeophtheirus salmonisexon
EMLSAE00000000735EMLSAE00000000735-709663Lepeophtheirus salmonisexon
EMLSAE00000000736EMLSAE00000000736-709664Lepeophtheirus salmonisexon
EMLSAE00000000737EMLSAE00000000737-709665Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767857auto767857Lepeophtheirus salmonispolypeptide
EMLSAP00000000154EMLSAP00000000154Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000154

>EMLSAP00000000154 ID=EMLSAP00000000154|Name=EMLSAP00000000154|organism=Lepeophtheirus salmonis|type=polypeptide|length=248bp
MKSLSVLVVIVSLSADVYAQNCGTNSGPCQFPFKYNGVTYEGCTLEDSQQ
PWCATSVDANRNYLNYDYCSQDCKQASTTTIAGGCKTLDGINCKFPFQYL
GITFTTCTAVGFGGLNWCATSTGQDNILTSYGICSSSCASESTVGANVCG
TFDRRSCIFPFVYNGQSYSTCTTVDSTIPWCATRVEPVSNEPXXXYMDTV
IITVREYLLLQLLDLQQLQRRLMEDLQQLPRRLIQDLPQLQXRLQQDF
back to top

mRNA from alignment at LSalAtl2s10242:220..1360-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000154-696001 ID=EMLSAT00000000154-696001|Name=EMLSAT00000000154|organism=Lepeophtheirus salmonis|type=mRNA|length=1141bp|location=Sequence derived from alignment at LSalAtl2s10242:220..1360- (Lepeophtheirus salmonis)
ATGAAGAGTTTGTCTGTTTTAGTCGTAATAGTATCCCTATCTGCTGATGT
CTGTAAGTACATAAAGAGGGTCTGAGTGATGATGAGAGGAATTTTATTCT
TGTTACAGATGCTCAAAATTGTGGCACAAATTCAGGACCCTGTCAGTTTC
CATTCAAGTATAATGGAGTAACTTATGAAGGATGTACCCTGGAAGACAGC
CAACAACCTTGGTGCGCCACTTCAGTTGATGCCAATCGAAACTACTTAAA
CTACGACTATTGCTCTCAAGACTGTAAACGTAAGTAATTACTTAGTTATC
TCTCTAATAGAATAAATGTTATTTTCCTATTATTTATATTATATATAGAA
GCTTCCACAACAACTATTGCAGGAGGTAAGTTAGAAAGTAAAGTACATAT
AMAAACTGTTCAACTTGAAAACCTTCTATCTGGTTCTAGGATGTAAAACA
CTCGATGGAATCAATTGTAAATTTCCATTTCAGTATTTAGGAATTACATT
TACTACATGTACAGCTGTAGGATTTGGAGGATTGAACTGGTGTGCTACTT
CAACTGGACAAGATAATATTTTGACTTCTTATGGAATATGCTCTTCTAGC
TGTGCAAGTGAGTGACATTATATAATGTGTTAATTCCACCAAAATTCATT
TATACATTTCATTCCTGTATTATTTAGGTGAATCAACAGTGGGAGCAAAC
GGTAAAATCTAGATTTGATGCAATAATAACTTTTAAACAATTTTTACAAT
TTGATTTGTAGTGTGTGGAACTTTTGATAGGAGGAGTTGTATTTTTCCAT
TTGTTTATAATGGTCAGAGCTACAGCACTTGCACAACTGTCGATAGCACC
ATTCCTTGGTGTGCCACAAGGGTGGAACCTGTATCTAACGAACCCATNNN
NNACTATATGGATACTGTAATAATAACTGTCAGGGTAATTAATAAATAAA
TACTAAAAGAAAAAAATATATTTGCAAATATGAACTATTACTTATAGTAA
GTGAATCAGGAGTACCTGTTACTACAACTACTGGATCTTCAACAACTGCA
ACGACGACTAATGGAGGATCTTCAACAACTGCCACGACGACTAATACAGG
ATCTTCCACAACTGCAACYACGACTACAACAGGATTTTTAA
back to top
Add to Basket