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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| LSalAtl2s1025 | supercontig | LSalAtl2s1025:108263..114171 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000161 >EMLSAP00000000161 ID=EMLSAP00000000161|Name=EMLSAP00000000161|organism=Lepeophtheirus salmonis|type=polypeptide|length=487bp
MFSEIWMCLRGPRLYRMYPDYTKISSTMCYEPNRLEKIGDMTIMSIRLMK
EMTKYGSPLLIPYFYKKDMYNKEGALIVFNFISAVLIFYSLAWMSRGLGR
FCNSSYRDFLSHLKTSQTQWDARIKNTLIKYDFEFFAWPVEFNAPPCPPY
TPKNNTGIDILKIILRPLSWILANTIGLSLVYPGSTALLQTGLHSSLMQG
RATLIRQHAGVRYKLRTSDGNFIDXIDTKGKTLIINCEGNGGYYEIGVTS
PAIDAGYSVLERNAADAVIQFAIQELGYNPSNIVIYGWSIGGFTASWIAM
RYPDIKGIVLDATFDDLLPLAVSRMPDRISPLIEDAVSAYLNLNVAEQLV
QYQGIIRLVRRSKDEMIVTDMNDASTNRANNLLEKLLTWRYPHVINTKLL
WEYLKLGIDQFVSKLNINEPLMIETLTSYKEEPYPLSLGDKESSPKLNTD
SKDQLTIYLAQKYMLDFDSTHCNALPVSYLDHINSEM back to topmRNA from alignment at LSalAtl2s1025:108263..114171+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000161-696008 ID=EMLSAT00000000161-696008|Name=EMLSAT00000000161|organism=Lepeophtheirus salmonis|type=mRNA|length=5909bp|location=Sequence derived from alignment at LSalAtl2s1025:108263..114171+ (Lepeophtheirus salmonis)
GTACGGAGATCATATATACCTATATGATTTAGTATGTAGCCATGGGCCAT
GGCACATATAGGTATGTACAATATACTAACATATATACGTATTTCCATTC
ATGTACTTCTACTAATCAAAACACATAATCTTAAAGTTGTTTTATTGATA
CTTAACTTTCGTGTTTTATGTACATATGTTTTATTGAAAACTCTTCTTCT
AGAGTTCTAGCAATCTCCTTGGTGGGAAATTCCAAAAAGCAAAAATCGAG
GATTAAAATAGTTTGTTTTTTCCCCCACAGCAAATTTAGAGTAGCGTAAA
ACTTTAACGTAGACTAGTGATGTTTTCTTCGCGAACGTAACGGCTCTATG
AGCCGGCTCTTTGAAGTGAACGACGGGATCAGGCTCCCCACCAATCAGGA
GCCGGCTCGGCTTAAATAATGGAGTTTTTGTTTTTTATTACAAAAAAAAA
TTGTCACGAAGGAAAAATTTGAAGGAAATAAATATTTTTCAAGGATTTCT
TTTCTAAAAATAATTGACATTTGGCAAAATTATGCAACAGAGGAAAAATT
TMCTACCRCCCCCCCCCCCCAAAAAAAAAATATATATATATACTGGTATG
TTAATTARTGTATCGATTAAAGTAACAAAAAAAATCTGTAGAGCCATTTC
GGAGCCAAAAGAGCAGGCTCTTTTTAGTGATCCGAGCTGAAAGAGCTGGT
TATCTAAAAAAAAAAGCCGGAATTTGCACCACTAACGTGGACTAAAACTT
TATTTTAACGTAGATGAGGTCGTTGCATTCGATATTATTATGAACGCTAG
ATGTCAGGTTATCAACTTACAACATATTCTTCAGCTCATCATCATCAGCT
CTGCTGAATGAAAAGGATTTTACTTTTTAGAATAATGTCACTTGACTAGA
GCTATGTGGGGCTGTTGAGAATTTTGGAAGCTGGTCAGAGGGTGAAACAA
TTAAACTGTAAATTCAACGTGAAATGTTTAGTGAAATATGGATGTGCCTA
AGGGGGCCGAGACTCTATCGAATGTATCCCGATTACACTAAAATCAGTTC
TACAATGTGCTATGAACCTAATCGATTGGAGAAAATAGGCGATATGACCA
TTATGTCCGTGAGTCKCRCCATCCACATTTCCCGCCTCTCCAGATATAGG
GAAAATGATTTTTATTTTAGATAAGACTGATGAAGGAGATGACGAAATAT
GGATCTCCATTGCTCATTCCCTACTTTTATAAGAAGGACATGTACAATAA
AGAAGGAGCTCTCATTGTGTTTAACTTCATCTCTGCTGTATTGATATTCT
ATAGCCTGGCATGGATGTCTCGAGGCTTGGGACGCTTCTGCAATTCTTCT
TATAGAGATTTCTTGTCGCATTTAAAAACATCTCAGACTCAATGGGATGC
TAGAATCAAAAATACGCTTATTAAATACGATTTCGAATTCTTTGCTTGGC
CAGTTGAATTCAACGCTCCACCCTGTCCTCCATACACTCCCAAGAATAAC
ACTGGGATAGATATATTGAAAATAATTCTGAGACCTCTCAGTTGGATCCT
TGCAAATACAATTGGTCTTTCTTTAGTTTATCCGGGTTCTACTGCCTTGC
TACAGACGGGGCTTCATTCCTCTCTCATGCAGGGAAGGGCCACACTTATT
CGTCAACATGCTGGGGTTCGATATAAATTGCGAACTTCTGATGGGAACTT
TATTGATARAATGTATYTTCATAGAAAGTGAGGCTTCCAAATTTGATGAA
ACCAGATATTTTGAACTCCCTTAACTCTTTTTTTTCAGAGATACTAAGGG
AAAAACACTTATCATCAATTGCGAAGGCAATGGTGGATACTATGAGATAG
GTGTAACTTCCCCGGCGATAGACGCTGGATATTCAGTTTTGGGTTGGANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATCCCGGTTTTGGA
TATAGTACTGGTCGTCCCTTTCCTTCCCAAGAACGGAATGCTGCTGATGC
AGTAATTCAATTTGCCATTCAGGAGTTGGGGTATAATCCCTCAAATATAG
TCATTTATGGGTGGAGCATTGGTGGCTTCACCGCCAGTTGGATTGCAATG
AGATATCCTGACATCAAAGGTATAGTTTTGGATGCTACTTTTGATGACTT
GCTCCCTTTGGCAGTCTCACGTATGCCTGATAGAATTAGCCCTCTCATTG
AAGACGCAGTGAGTGCCTATCTCAACCTAAATGTGGCGGAGCAACTCGTT
CAGTATCAAGGAATCATTAGACTAGTGAGACGATCAAAAGATGAAATGAT
AGTGACGGATATGAACGATGCCTCCACTAATAGGGCCAATAACTTACTAG
AGAAGCTTCTTACCTGGAGGTACCCCCATGTTATCAATACAAAGCTATTA
TGGGAATATTTAAAACTTGGAATAGGTYAAAAAGGTACTGTARTATCCAT
AATTTTCGAAATTCGTATATTGATTACACAAATTATTTCAGATCAATTTG
TGTCAAAACTAAATATTAATGAGCCTCTCATGATAGAGACTCTAACAAGC
TACAAGGAGGAGCCCTATCCTTTATCTTTAGGTGATAAAGAATCCTCCCC
CAAGTTAAATACTGACTCCAAAGATCAACTAACTATATATTTGGTAATAT
CCACAACAATTAATAATTATTTAATTATAAACATATTGTATTTCTCTTCT
TCTCAAGGCCCAAAAATACATGCTGGACTTTGATTCAACTCACTGCAATG
CCCTGCCCGTATCATATTTAGATCATATAAATTCAGAAATGTGAAAAACC
AATCAATTTACAAGGATAAACTCGTCCAGACCAGATATAAATATAATTGA
TATTTATATATTTTTTTGAATATGTAACGTAATAGTTGTTGTAGTTAATC
CTAAATTATAATAAATATATCAATATTATATGTGTGAGTAAATGTTTAAT
GAGCTGAACGAATCCTTCTTTTAAAGAGATGTTGCTTCACTTTTCGATTG
TATATATCAAGCATAATTCTGTTGGTAAGATGATACTGTTTTTTCTTTAT
TTCTCTTTCAACTTTCTTCACTTCAGGTAAATCCCGACATCGCCTCTTAG
TGCTCTCCACCATTTCCTTATAGTCGAATACTCTGACGACTCTATTTGGA
ACGTAAGAGATATCAGCCCTTCTCTTGGAMGAGGGTGAAAGAGTGGCTAW
WTTTTYAAGCCATATCCTTTTCCTTTCCTGCTCTATCAAACGTTCTTCCC
TGGATTCTCGAAGAAGCTTAACTCTTTGACGTGATCTCTGGAGAAAGCTA
GGATAGTTCTTCTTAAGAGAGTCTGAGAGACCTAGAGATGTATTCTTATG
AGGTGGACTGTCACCATGTTGATAATGACTATTGATGCTTTTTTTGATTG
GACCTAAGTTTAATCCAGCTATATGGTTGGAAATGATATTACGATTTTCT
TTGGAAACAAAAAAGTCCTTTTCGCTAACCATTCGATTTCCTTTACTGTT
TACAGGGGGTTTAGAACTTACTTCTAAGGAATAAAAGGAATTTACTTTAC
GGCGGGAATCAGACAWTGTCGTACTTTTATTTTGAGATAAAGTTGAACTG
CGCTTAAGATTAACTTCGCAATGAGAATCCATTTTTACGTTAGACGTGCG
ATTTATAAAGGCCGTGTTTCTGTGAGAGTGATAATATTTTTTGTCTAATG
ATCGTGAGGATATAGAAGAAGAAGATTCACTACTACTTCTAATATCCAGA
GCCACATCCTTGTATGAAGGACATGTTTGTTTAAATTCCGATTCTGTAGA
AGGGAGAAAAGAGGCTTTTTGACATAATATTTTGTCTTCAGCTAGTAAGT
CCTTAGGGGATGGGTAGGTTTGTCCAAAATCAGATTTCGATGTCCAACAT
AATCCATGTCGAGAGGAGGATCGTATTTCTTCTGATCTGCCTTCAGTGTT
TTCATTCGAAACAACACTTTTTTTCTCTGACTGATGATCATCATCTTCAG
AGAGTGATAAAATATTGTCAGTTGATTTATATGATATATCCTTTTCTATA
GAAGTTTTAGTCGGAKCCCGATTCGAAGAAGTTAACTGCCGATCGGGATG
TAAAACATTTTGCTGCAGTACCTGTGTAACATGAGAAGTAGTCATGGTTA
AAGAAGTGATTTGGCTAGGATCATTAGCAACGGCAACAGAGGAGGATTCA
CACGTTTGTGTATCGCTTGAAGAGCAACCTGATTCACTTAATTCATGATT
TGATTTTGAGGAGGAAATCGATGTATGGGATGAAGATATTTGGAGGGTGA
AATTTTTATTGGGTGTGTCTCTGACTGAAGAGTTGTCAGAGGTTAGAGAA
ATATCCGATTTGTATAAAGACAGTGAAGGTACACATTTCAAAAGCTTGCG
CTCGAGTTTATCTAATTTTTGAATTTCGTGCTCAAGTTTCAAGGATGAAG
TGGAATGTGGGGAGTCACTCTCGTTACAACCAACTTCTTCATCTTTCATG
AATTTCATTAATTTTCCTGCAAGTTTCTGCTTCATTTTACTCTCAGCAGA
GGTGAGTGACGGAGTAGAGATGATATGAATGTAATGACTTAGTTTTTTTT
ATACATCTTGAAGAGAGCATTTTTGCACACTTTTTTAGGGAGACATTTCT
TGGTCGGAGGAAAGCCTTTATTTGCTTCCTTCAATGAATTCATTTCCGAT
TCCATATTGGAAGTGGAATTAACCTCATTTGAGCGAGTTACTTTAACACT
ATGTTGTAGTTTCAGAATTTTCGTGTCATCAGGTTCTGTGCTTGATTTCG
ATGCTTCTATTTGATTAACTTCTTCATTATATAAAGAAGGCTTTTCGAGT
TCTTCCTGTGAGCCAACAGTGACTTTTGCATCACTTACAGGCAGTTGATC
ATCCATAAGACTAAGAATGTCCTTTTCATTCTTGGGGGAAGATGCTTTAC
TTGAAGAATCTGAATATGGTAAGAAATATAGTTCAGATGACTTGGGTTTT
TGTAAAAAGGGAATGACAGTCCCAGTGGATGAGGAGCTCGAAGGCTCTAC
AGGAGACGGCCCTCTTAAATTTTTAAAATACTTTGCTGGAAGTATTGAAT
CTGAATCCTTGGAATGTAAATCCGTCCAAGATTTAGAACGTCTTTGAAGA
CTACGTATTTTTTCTTGCTGAATGGGAGATAGAGGGGATATAGATTCGCA
GGATCTCAGAAAGGGTGCCTTAATTGCATCTATTTCTGAGGGCGTGGACT
CAAAATAATCATTATTCCTGAGCAAAAAGTCACCAAATTTTTTAAGTCTC
AATTTTTCAACTTCGAATTCATTCTGATCCCTTTTGTAAGAACGGAACGC
TGATGAACGATGTGACGTTGTGGACTTCCCGCTAGAGGTAGGGGTAGTCT
GTAGGATTTCCTTGTAGTTTTGAATGGCAAGTTTTTCCAAGGCACTGTAA
TGAATAATAAATTGATTATAATGAATGGTTATTAATAATTATTAGCGTGA
ACGGTTATACACCTTAATTCAACAGCAGGTTTTTTGGATGAAAGATTAGA
GGCTAATCCAATGTAACCTAAATCCGCCCCTGAATCCCATTCTAAATTCC
TCCTTCCCCCAGCTGATGATACAACAGAAATGCTTGAGGCAACGGATGGA
GAAATGGATCTATCAGAATGGATTCGTGGAAGATCCCCTCGTATTCCATC
ACCACGGGATGTTCCGCTCTCAATATGAATAGAGTCCACAAGAGAACTTA
ATAAGAGTCCTTCAGTGAATCCCGTAGATACAAATTCACTATTCACATTG
TGTTCATCCAAATTCAAACGAGTGATCAAAGATTCTGCATGAGATTGTCC
AGACTCTGG back to top
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